Your job contains 1 sequence.
>psy3029
MTIWDNHSLTHNTYLPTYYETDLFLLNRTNQSKEQLRRKQKEGKIQTSSLTEVSVNLPKL
NYQKNNKNKKKTLIPYLEMLVSNKIKVGLLSDKFVVGLSINSRVPNCFEANWFWLGVGKT
SMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNAN
AALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKS
IGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGVVEIT
PLSSLDTPPLTEAETAKFVVGLSINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHIS
PTIGASFFTAKINVGENKVKLQLRTGLKVSKIPVPTRNREGATTGRITEPDTMNNNNKKK
NRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFEGYLKT
FSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRDTFATD
TAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCNHNVGTATSSIKMFIFPLIQVAP
YTMEESVLAIQSCLRPS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3029
(617 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015372 - symbol:RabX1 "RabX1" species:7227 "Droso... 503 3.7e-48 1
UNIPROTKB|Q17R06 - symbol:RAB21 "Ras-related protein Rab-... 415 8.4e-39 1
UNIPROTKB|F1PGI1 - symbol:RAB21 "Ras-related protein Rab-... 414 1.1e-38 1
UNIPROTKB|P55745 - symbol:RAB21 "Ras-related protein Rab-... 414 1.1e-38 1
UNIPROTKB|Q9UL25 - symbol:RAB21 "Ras-related protein Rab-... 414 1.1e-38 1
UNIPROTKB|F1SH25 - symbol:RAB21 "Uncharacterized protein"... 414 1.1e-38 1
UNIPROTKB|F1NC27 - symbol:RAB21 "Uncharacterized protein"... 413 1.5e-38 1
MGI|MGI:894308 - symbol:Rab21 "RAB21, member RAS oncogene... 413 1.5e-38 1
RGD|1303150 - symbol:Rab21 "RAB21, member RAS oncogene fa... 413 1.5e-38 1
UNIPROTKB|F1MPP1 - symbol:LOC781001 "Uncharacterized prot... 407 7.7e-38 1
DICTYBASE|DDB_G0277441 - symbol:rabJ "Rab GTPase" species... 398 8.7e-37 1
ZFIN|ZDB-GENE-060929-1062 - symbol:zgc:154045 "zgc:154045... 398 8.7e-37 1
UNIPROTKB|G3MZN2 - symbol:RAB31 "Uncharacterized protein"... 386 2.1e-35 1
MGI|MGI:1914603 - symbol:Rab31 "RAB31, member RAS oncogen... 386 2.1e-35 1
UNIPROTKB|E1BTI1 - symbol:RAB31 "Uncharacterized protein"... 384 3.5e-35 1
UNIPROTKB|E2R5A5 - symbol:RAB31 "Uncharacterized protein"... 384 3.5e-35 1
UNIPROTKB|Q13636 - symbol:RAB31 "Ras-related protein Rab-... 384 3.5e-35 1
RGD|628598 - symbol:Rab31 "RAB31, member RAS oncogene fam... 383 4.5e-35 1
FB|FBgn0039966 - symbol:Rab21 "Rab21" species:7227 "Droso... 374 4.7e-34 1
DICTYBASE|DDB_G0286553 - symbol:rab21 "Rab GTPase" specie... 373 6.1e-34 1
SGD|S000005615 - symbol:VPS21 "Rab family GTPase" species... 365 4.8e-33 1
ZFIN|ZDB-GENE-041114-161 - symbol:rab22a "RAB22A, member ... 364 6.2e-33 1
GENEDB_PFALCIPARUM|PFA0335w - symbol:Rab5c "Rab5c, GTPase... 358 2.9e-32 1
UNIPROTKB|Q8I274 - symbol:Rab5c "Rab5c, GTPase" species:3... 358 2.9e-32 1
UNIPROTKB|Q5ZHW4 - symbol:RAB5B "Ras-related protein Rab-... 357 3.8e-32 1
POMBASE|SPAC6F6.15 - symbol:ypt5 "GTPase Ypt5" species:48... 355 6.2e-32 1
UNIPROTKB|E2QW69 - symbol:RAB5B "Uncharacterized protein"... 354 8.1e-32 1
UNIPROTKB|P61020 - symbol:RAB5B "Ras-related protein Rab-... 354 8.1e-32 1
UNIPROTKB|Q5RBG1 - symbol:RAB5B "Ras-related protein Rab-... 354 8.1e-32 1
MGI|MGI:105938 - symbol:Rab5b "RAB5B, member RAS oncogene... 354 8.1e-32 1
UNIPROTKB|Q5ZLB8 - symbol:RAB22A "Uncharacterized protein... 352 1.3e-31 1
UNIPROTKB|F1MHP4 - symbol:RAB22A "Uncharacterized protein... 349 2.9e-31 1
UNIPROTKB|Q9UL26 - symbol:RAB22A "Ras-related protein Rab... 348 3.7e-31 1
MGI|MGI:105072 - symbol:Rab22a "RAB22A, member RAS oncoge... 348 3.7e-31 1
FB|FBgn0014010 - symbol:Rab5 "Rab5" species:7227 "Drosoph... 347 4.8e-31 1
UNIPROTKB|A5GHL0 - symbol:RAB22A "Uncharacterized protein... 347 4.8e-31 1
WB|WBGene00004279 - symbol:rab-21 species:6239 "Caenorhab... 345 8.0e-31 1
UNIPROTKB|Q5ZIP7 - symbol:RAB5A "Uncharacterized protein"... 344 1.0e-30 1
WB|WBGene00004268 - symbol:rab-5 species:6239 "Caenorhabd... 344 1.0e-30 1
UNIPROTKB|P91857 - symbol:rab-5 "Protein RAB-5" species:6... 344 1.0e-30 1
UNIPROTKB|F1MNI4 - symbol:RAB5B "Uncharacterized protein"... 343 1.3e-30 1
UNIPROTKB|Q58DS9 - symbol:RAB5C "Ras-related protein Rab-... 343 1.3e-30 1
UNIPROTKB|F2Z560 - symbol:RAB5C "Uncharacterized protein"... 343 1.3e-30 1
UNIPROTKB|P51154 - symbol:RAB22A "Ras-related protein Rab... 342 1.7e-30 1
ZFIN|ZDB-GENE-040426-2593 - symbol:rab5b "RAB5B, member R... 342 1.7e-30 1
UNIPROTKB|Q0IIG7 - symbol:RAB5A "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|P18066 - symbol:RAB5A "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|P51147 - symbol:RAB5C "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|P20339 - symbol:RAB5A "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|P51148 - symbol:RAB5C "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|I3LFZ8 - symbol:RAB5B "Uncharacterized protein"... 341 2.2e-30 1
UNIPROTKB|Q06AU6 - symbol:RAB5A "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|P61271 - symbol:RAB5A "Ras-related protein Rab-... 341 2.2e-30 1
UNIPROTKB|Q5R7L7 - symbol:RAB5C "Ras-related protein Rab-... 341 2.2e-30 1
MGI|MGI:105926 - symbol:Rab5a "RAB5A, member RAS oncogene... 341 2.2e-30 1
MGI|MGI:105306 - symbol:Rab5c "RAB5C, member RAS oncogene... 341 2.2e-30 1
SGD|S000004252 - symbol:YPT6 "Rab family GTPase" species:... 341 2.2e-30 1
ASPGD|ASPL0000015781 - symbol:srgH species:162425 "Emeric... 340 2.9e-30 1
ZFIN|ZDB-GENE-030131-139 - symbol:rab5aa "RAB5A, member R... 340 2.9e-30 1
CGD|CAL0000352 - symbol:VPS21 species:5476 "Candida albic... 339 3.7e-30 1
UNIPROTKB|Q59X89 - symbol:VPS211 "Likely rab family GTP-b... 339 3.7e-30 1
UNIPROTKB|O88565 - symbol:Rab5a "Protein Rab5a" species:1... 338 4.7e-30 1
TAIR|locus:2153202 - symbol:RHA1 "RAB homolog 1" species:... 338 4.7e-30 1
RGD|2319287 - symbol:LOC100361891 "RAB5A, member RAS onco... 337 6.1e-30 1
CGD|CAL0003771 - symbol:orf19.7216 species:5476 "Candida ... 336 7.9e-30 1
ZFIN|ZDB-GENE-040122-3 - symbol:rab5ab "RAB5A, member RAS... 336 7.9e-30 1
TAIR|locus:2123010 - symbol:ARA7 species:3702 "Arabidopsi... 334 1.3e-29 1
ZFIN|ZDB-GENE-031118-30 - symbol:rab5c "RAB5C, member RAS... 334 1.3e-29 1
UNIPROTKB|F1NST3 - symbol:RAB5C "Ras-related protein Rab-... 333 1.7e-29 1
UNIPROTKB|Q98932 - symbol:RAB5C "Ras-related protein Rab-... 332 2.2e-29 1
MGI|MGI:1858203 - symbol:Rab25 "RAB25, member RAS oncogen... 332 2.2e-29 1
ASPGD|ASPL0000074235 - symbol:srgG species:162425 "Emeric... 298 2.5e-29 2
RGD|1308447 - symbol:Rab25 "RAB25, member RAS oncogene fa... 331 2.8e-29 1
UNIPROTKB|P57735 - symbol:RAB25 "Ras-related protein Rab-... 330 3.6e-29 1
UNIPROTKB|Q58DW6 - symbol:RAB25 "Ras-related protein Rab-... 329 4.6e-29 1
UNIPROTKB|P46629 - symbol:RAB25 "Ras-related protein Rab-... 329 4.6e-29 1
WB|WBGene00008672 - symbol:F11A5.4 species:6239 "Caenorha... 329 4.6e-29 1
UNIPROTKB|F1RLQ0 - symbol:RAB25 "Uncharacterized protein"... 328 6.0e-29 1
UNIPROTKB|E2RQ15 - symbol:RAB25 "Ras-related protein Rab-... 326 9.9e-29 1
DICTYBASE|DDB_G0271984 - symbol:rab5A "Rab GTPase" specie... 324 1.6e-28 1
GENEDB_PFALCIPARUM|PF13_0119 - symbol:Rab11a "Rab11a, GTP... 324 1.6e-28 1
UNIPROTKB|Q76NM4 - symbol:Rab11a "Rab11a, GTPase" species... 324 1.6e-28 1
MGI|MGI:104640 - symbol:Rab17 "RAB17, member RAS oncogene... 324 1.6e-28 1
UNIPROTKB|Q9H0T7 - symbol:RAB17 "Ras-related protein Rab-... 322 2.7e-28 1
UNIPROTKB|F1NWF1 - symbol:RAB30 "Uncharacterized protein"... 321 3.5e-28 1
UNIPROTKB|Q17QB7 - symbol:RAB30 "Ras-related protein Rab-... 319 5.8e-28 1
UNIPROTKB|E2RG98 - symbol:RAB30 "Uncharacterized protein"... 319 5.8e-28 1
UNIPROTKB|Q15771 - symbol:RAB30 "Ras-related protein Rab-... 319 5.8e-28 1
MGI|MGI:1923235 - symbol:Rab30 "RAB30, member RAS oncogen... 319 5.8e-28 1
UNIPROTKB|D4AA97 - symbol:Rab30 "RAB30, member RAS oncoge... 319 5.8e-28 1
UNIPROTKB|E1C6J7 - symbol:RAB17 "Uncharacterized protein"... 318 7.4e-28 1
FB|FBgn0015791 - symbol:Rab14 "Rab14" species:7227 "Droso... 317 9.6e-28 1
UNIPROTKB|F1N8Z3 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|Q90965 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|G1K288 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|P61105 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|P61019 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|Q01971 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|Q4R4X6 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
UNIPROTKB|Q5R6B6 - symbol:RAB2A "Ras-related protein Rab-... 317 9.6e-28 1
WARNING: Descriptions of 1678 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015372 [details] [associations]
symbol:RabX1 "RabX1" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS;TAS] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 EMBL:AE013599
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0007422 eggNOG:COG1100 KO:K07976 HSSP:P35278
GeneTree:ENSGT00640000091439 EMBL:AF209706 EMBL:AY122200
RefSeq:NP_524713.1 UniGene:Dm.1428 SMR:Q9V3C2 STRING:Q9V3C2
EnsemblMetazoa:FBtr0072120 GeneID:44172 KEGG:dme:Dmel_CG3870
UCSC:CG3870-RA CTD:44172 FlyBase:FBgn0015372 InParanoid:Q9V3C2
OMA:WIQELHR OrthoDB:EOG43XSKM GenomeRNAi:44172 NextBio:836936
Uniprot:Q9V3C2
Length = 261
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 97/180 (53%), Positives = 133/180 (73%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+REE
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDS-DNITSAN 292
AF ++ SIG TY+ETS DQG+E VF++ ++GL+ L+ E + SLR + S D++ N
Sbjct: 135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG-KSPSLRSFQSTDSLAYTN 193
>UNIPROTKB|Q17R06 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC118088
IPI:IPI00697565 RefSeq:NP_001068785.1 UniGene:Bt.34284
ProteinModelPortal:Q17R06 SMR:Q17R06 PRIDE:Q17R06 GeneID:507488
KEGG:bta:507488 CTD:23011 InParanoid:Q17R06 KO:K07890
OrthoDB:EOG4W0XF0 NextBio:20868087 Uniprot:Q17R06
Length = 222
Score = 415 (151.1 bits), Expect = 8.4e-39, P = 8.4e-39
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 27 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAE 145
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
>UNIPROTKB|F1PGI1 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00640000091439
EMBL:AAEX03007069 Ensembl:ENSCAFT00000000732 Uniprot:F1PGI1
Length = 238
Score = 414 (150.8 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 43 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 101
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 102 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 161
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 162 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 198
>UNIPROTKB|P55745 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4W0XF0
ProteinModelPortal:P55745 SMR:P55745 PRIDE:P55745 Uniprot:P55745
Length = 223
Score = 414 (150.8 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 28 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 86
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 146
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
>UNIPROTKB|Q9UL25 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 GO:GO:0032154 eggNOG:COG1100
GO:GO:0019003 BRENDA:3.6.5.2 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0
EMBL:AF091035 EMBL:BC021901 EMBL:BC092475 EMBL:D42087
IPI:IPI00007755 RefSeq:NP_055814.1 UniGene:Hs.524590 PDB:1YZT
PDB:1YZU PDB:1Z08 PDB:1Z0I PDB:2OT3 PDBsum:1YZT PDBsum:1YZU
PDBsum:1Z08 PDBsum:1Z0I PDBsum:2OT3 ProteinModelPortal:Q9UL25
SMR:Q9UL25 DIP:DIP-29349N IntAct:Q9UL25 MINT:MINT-3081967
STRING:Q9UL25 PhosphoSite:Q9UL25 DMDM:13633613 PaxDb:Q9UL25
PeptideAtlas:Q9UL25 PRIDE:Q9UL25 DNASU:23011
Ensembl:ENST00000261263 GeneID:23011 KEGG:hsa:23011 UCSC:uc001swt.3
GeneCards:GC12P072100 HGNC:HGNC:18263 HPA:HPA016988 MIM:612398
neXtProt:NX_Q9UL25 PharmGKB:PA34111 InParanoid:Q9UL25 OMA:SHFFASA
PhylomeDB:Q9UL25 ChiTaRS:RAB21 EvolutionaryTrace:Q9UL25
GenomeRNAi:23011 NextBio:43928 ArrayExpress:Q9UL25 Bgee:Q9UL25
CleanEx:HS_RAB21 Genevestigator:Q9UL25 GermOnline:ENSG00000080371
Uniprot:Q9UL25
Length = 225
Score = 414 (150.8 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 30 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 89 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 149 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 185
>UNIPROTKB|F1SH25 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 KO:K07890 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:CU457452 RefSeq:XP_003481707.1
Ensembl:ENSSSCT00000000550 GeneID:100736618 KEGG:ssc:100736618
Uniprot:F1SH25
Length = 222
Score = 414 (150.8 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 27 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 145
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
>UNIPROTKB|F1NC27 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:AADN02009843 IPI:IPI00581530
Ensembl:ENSGALT00000016553 Uniprot:F1NC27
Length = 228
Score = 413 (150.4 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 78/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 34 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 92
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 93 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAE 152
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 153 TYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 189
>MGI|MGI:894308 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005768 "endosome" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:894308 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0031901 GO:GO:0000139 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 CTD:23011 KO:K07890
OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC055042 EMBL:M79302
IPI:IPI00337980 PIR:A38879 RefSeq:NP_077774.1 UniGene:Mm.21936
ProteinModelPortal:P35282 SMR:P35282 IntAct:P35282 STRING:P35282
PhosphoSite:P35282 PaxDb:P35282 PRIDE:P35282
Ensembl:ENSMUST00000020343 GeneID:216344 KEGG:mmu:216344
InParanoid:P35282 NextBio:375111 Bgee:P35282 CleanEx:MM_RAB21
Genevestigator:P35282 GermOnline:ENSMUSG00000020132 Uniprot:P35282
Length = 222
Score = 413 (150.4 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 77/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 28 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 86
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 YRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 146
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
>RGD|1303150 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005768 "endosome" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030659 "cytoplasmic vesicle
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1303150 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:Q9UL25 HOGENOM:HOG000233968
CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC079323
IPI:IPI00366221 RefSeq:NP_001004238.1 UniGene:Rn.162952
ProteinModelPortal:Q6AXT5 SMR:Q6AXT5 PhosphoSite:Q6AXT5
PRIDE:Q6AXT5 Ensembl:ENSRNOT00000005258 GeneID:299799
KEGG:rno:299799 UCSC:RGD:1303150 GeneTree:ENSGT00640000091439
InParanoid:Q6AXT5 NextBio:645786 Genevestigator:Q6AXT5
Uniprot:Q6AXT5
Length = 223
Score = 413 (150.4 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 77/157 (49%), Positives = 114/157 (72%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 28 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 86
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 YRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 146
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
>UNIPROTKB|F1MPP1 [details] [associations]
symbol:LOC781001 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 IPI:IPI00697565
OMA:FQKVKSW GeneTree:ENSGT00640000091439 EMBL:DAAA02073306
Ensembl:ENSBTAT00000025807 Uniprot:F1MPP1
Length = 214
Score = 407 (148.3 bits), Expect = 7.7e-38, P = 7.7e-38
Identities = 77/157 (49%), Positives = 113/157 (71%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+ Y F+ HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 19 VGKTSLVLCYCENKFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 78 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 138 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 174
>DICTYBASE|DDB_G0277441 [details] [associations]
symbol:rabJ "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277441 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000020 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P20339 RefSeq:XP_642644.1
ProteinModelPortal:Q8MYF2 EnsemblProtists:DDB0229403 GeneID:8621060
KEGG:ddi:DDB_G0277441 OMA:KIKYLIW Uniprot:Q8MYF2
Length = 256
Score = 398 (145.2 bits), Expect = 8.7e-37, P = 8.7e-37
Identities = 74/152 (48%), Positives = 106/152 (69%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT++ +RY+ +F ++ TIGASF T IN+ NK+K +WD+AGQ+RFRS+A +YY
Sbjct: 20 VGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A+LVFDITQ +F +K WV+ELK N+ E +++ + GNK DLE +R+V E A
Sbjct: 80 RGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKL 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ I Y ETSA +++G+E +FL + K LI
Sbjct: 140 YADEINAMYVETSAKENEGVEGMFLEIGKKLI 171
>ZFIN|ZDB-GENE-060929-1062 [details] [associations]
symbol:zgc:154045 "zgc:154045" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060929-1062 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07890 OrthoDB:EOG4W0XF0 EMBL:BC124522
IPI:IPI00803714 RefSeq:NP_001070133.1 UniGene:Dr.107584
ProteinModelPortal:Q08BX0 SMR:Q08BX0 GeneID:767727 KEGG:dre:767727
InParanoid:Q08BX0 NextBio:20918113 Bgee:Q08BX0 Uniprot:Q08BX0
Length = 216
Score = 398 (145.2 bits), Expect = 8.7e-37, P = 8.7e-37
Identities = 83/181 (45%), Positives = 122/181 (67%)
Query: 117 VGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ HI+ T+ ASF T K+N+ +V L +WDTAGQERF ++ P+Y
Sbjct: 21 VGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNITGKRVNLAIWDTAGQERFHALGPIY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ EEA
Sbjct: 80 YRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVEEAE 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y++S+G +Y TSA ++GIE++FL++ K ++ +Q L S R + N +S RG
Sbjct: 140 GYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQ--LEERS-RGNGASN-SSTGRRG 195
Query: 296 V 296
V
Sbjct: 196 V 196
>UNIPROTKB|G3MZN2 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OMA:SKQIPPL GeneTree:ENSGT00640000091139
EMBL:DAAA02056827 Ensembl:ENSBTAT00000066041 Uniprot:G3MZN2
Length = 194
Score = 386 (140.9 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 78/168 (46%), Positives = 111/168 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-QESLHTSSLRV 282
Y++SIG ETSA IE++F +S+ + L E+ ++ S+++
Sbjct: 135 EYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKL 182
>MGI|MGI:1914603 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031623
"receptor internalization" evidence=ISO] [GO:0032588 "trans-Golgi
network membrane" evidence=ISO] [GO:0032869 "cellular response to
insulin stimulus" evidence=ISO] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISO] [GO:0045055 "regulated
secretory pathway" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0048193 "Golgi vesicle transport" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914603 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0005770
GO:GO:0005802 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 CTD:11031 KO:K07892 OMA:SKQIPPL
OrthoDB:EOG48KRC8 EMBL:AK051270 EMBL:BC013063 IPI:IPI00222632
RefSeq:NP_598446.2 UniGene:Mm.29274 ProteinModelPortal:Q921E2
SMR:Q921E2 STRING:Q921E2 PhosphoSite:Q921E2 PaxDb:Q921E2
PRIDE:Q921E2 GeneID:106572 KEGG:mmu:106572 InParanoid:Q921E2
NextBio:358266 Bgee:Q921E2 CleanEx:MM_RAB31 Genevestigator:Q921E2
GermOnline:ENSMUSG00000056515 Uniprot:Q921E2
Length = 194
Score = 386 (140.9 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 78/168 (46%), Positives = 111/168 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-QESLHTSSLRV 282
Y++SIG ETSA IE++F +S+ + L QE+ ++ +++
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKL 182
>UNIPROTKB|E1BTI1 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OMA:SKQIPPL GeneTree:ENSGT00640000091139
EMBL:AADN02052698 EMBL:AADN02052699 EMBL:AADN02052700
EMBL:AADN02052701 EMBL:AADN02052702 EMBL:AADN02052703
EMBL:AADN02052704 EMBL:AADN02052705 IPI:IPI00592658
Ensembl:ENSGALT00000033559 NextBio:20830561 Uniprot:E1BTI1
Length = 194
Score = 384 (140.2 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 135 EYAESIGAIVVETSAKNAVNIEELFQGISQ 164
>UNIPROTKB|E2R5A5 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:11031 KO:K07892
OMA:SKQIPPL GeneTree:ENSGT00640000091139 EMBL:AAEX03005508
RefSeq:XP_850610.2 ProteinModelPortal:E2R5A5
Ensembl:ENSCAFT00000029725 GeneID:608485 KEGG:cfa:608485
NextBio:20894132 Uniprot:E2R5A5
Length = 195
Score = 384 (140.2 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKNAINIEELFQGISR 165
>UNIPROTKB|Q13636 [details] [associations]
symbol:RAB31 "Ras-related protein Rab-31" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0045055 "regulated secretory pathway"
evidence=IMP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0031623 "receptor internalization" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0090382
"phagosome maturation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0032588
GO:GO:0032869 GO:GO:0003924 GO:GO:0005770 PROSITE:PS51419
GO:GO:0005769 GO:GO:0043001 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045055 HOVERGEN:HBG009351 EMBL:AP000902 EMBL:U57091
EMBL:U59877 EMBL:AF234995 EMBL:AF183421 EMBL:AF498957 EMBL:AK314809
EMBL:BT020027 EMBL:BT020028 EMBL:CR407659 EMBL:AC006238
EMBL:BC001148 IPI:IPI00014376 PIR:JC4961 RefSeq:NP_006859.2
UniGene:Hs.99528 PDB:2FG5 PDBsum:2FG5 ProteinModelPortal:Q13636
SMR:Q13636 IntAct:Q13636 MINT:MINT-1404598 STRING:Q13636
PhosphoSite:Q13636 DMDM:2500069 PaxDb:Q13636 PRIDE:Q13636
DNASU:11031 Ensembl:ENST00000306096 Ensembl:ENST00000578921
GeneID:11031 KEGG:hsa:11031 UCSC:uc002kog.2 CTD:11031
GeneCards:GC18P009701 HGNC:HGNC:9771 HPA:HPA019717 MIM:605694
neXtProt:NX_Q13636 PharmGKB:PA34122 InParanoid:Q13636 KO:K07892
OMA:SKQIPPL OrthoDB:EOG48KRC8 PhylomeDB:Q13636 ChiTaRS:RAB31
EvolutionaryTrace:Q13636 GenomeRNAi:11031 NextBio:41922 Bgee:Q13636
CleanEx:HS_RAB31 Genevestigator:Q13636 GermOnline:ENSG00000168461
Uniprot:Q13636
Length = 194
Score = 384 (140.2 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 78/168 (46%), Positives = 110/168 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-QESLHTSSLRV 282
Y++SIG ETSA IE++F +S+ + L E+ + +++V
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKV 182
>RGD|628598 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005769 "early
endosome" evidence=ISO;ISS;IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031623 "receptor internalization"
evidence=ISO;ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISO;ISS] [GO:0045055 "regulated
secretory pathway" evidence=ISO;ISS] [GO:0045335 "phagocytic
vesicle" evidence=ISO;ISS] [GO:0048193 "Golgi vesicle transport"
evidence=IMP] [GO:0090382 "phagosome maturation" evidence=ISO;ISS]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628598 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:11031
KO:K07892 OrthoDB:EOG48KRC8 EMBL:AF254800 EMBL:BC072698
IPI:IPI00454495 RefSeq:NP_659562.2 UniGene:Rn.28921
ProteinModelPortal:Q6GQP4 SMR:Q6GQP4 IntAct:Q6GQP4 STRING:Q6GQP4
PRIDE:Q6GQP4 Ensembl:ENSRNOT00000067974 GeneID:246324
KEGG:rno:246324 GeneTree:ENSGT00640000091139 NextBio:623748
ArrayExpress:Q6GQP4 Genevestigator:Q6GQP4 Uniprot:Q6GQP4
Length = 194
Score = 383 (139.9 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 135 EYAESIGALVVETSAKNAINIEELFQGISR 164
>FB|FBgn0039966 [details] [associations]
symbol:Rab21 "Rab21" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
[GO:0036313 "phosphatidylinositol 3-kinase catalytic subunit
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
CTD:23011 OMA:FQKVKSW GeneTree:ENSGT00640000091439 UniGene:Dm.11159
GeneID:3355163 KEGG:dme:Dmel_CG17515 FlyBase:FBgn0039966
GenomeRNAi:3355163 NextBio:850940 RefSeq:NP_001036321.2
ProteinModelPortal:Q7PLE9 SMR:Q7PLE9 PRIDE:Q7PLE9
EnsemblMetazoa:FBtr0299903 UCSC:CG17515-RC InParanoid:Q7PLE9
PhylomeDB:Q7PLE9 ArrayExpress:Q7PLE9 Bgee:Q7PLE9 Uniprot:Q7PLE9
Length = 222
Score = 374 (136.7 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 75/181 (41%), Positives = 124/181 (68%)
Query: 117 VGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGKTS+V+RY+ F+ H+S T+ ASF + K+++ + + +L +WDTAGQERF ++ P+
Sbjct: 24 VGKTSLVLRYMEDRFNAQHLS-TLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPI 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 83 YYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEA 142
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVY--DSDNITSA 291
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ S LR+ D+DN+ ++
Sbjct: 143 LQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNS 202
Query: 292 N 292
+
Sbjct: 203 D 203
>DICTYBASE|DDB_G0286553 [details] [associations]
symbol:rab21 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0005622 "intracellular" evidence=IDA] [GO:0006907
"pinocytosis" evidence=IMP] [GO:0050766 "positive regulation of
phagocytosis" evidence=IGI;IMP] [GO:0046847 "filopodium assembly"
evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0286553 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0030866 GO:GO:0015031 GO:GO:0006909
EMBL:AAFI02000089 GO:GO:0050766 PROSITE:PS51419 GO:GO:0046847
eggNOG:COG1100 KO:K07890 EMBL:L21012 RefSeq:XP_637605.1
ProteinModelPortal:P34142 SMR:P34142 IntAct:P34142 STRING:P34142
PRIDE:P34142 EnsemblProtists:DDB0191253 GeneID:8625745
KEGG:ddi:DDB_G0286553 OMA:FQKVKSW Uniprot:P34142
Length = 212
Score = 373 (136.4 bits), Expect = 6.1e-34, P = 6.1e-34
Identities = 76/187 (40%), Positives = 117/187 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V RYI +F+ T A FF IN+G ++ L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + AL+V+DIT SF K W+KELK + + LC++GNK DLE +R + +A
Sbjct: 78 RGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEKTRVIPLADAEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNIT--SANPR 294
Y+KS+G +Y TSA ++GIE++FL++++ +I L++S + ++ + N T + N
Sbjct: 138 YAKSVGAIHYSTSAKLNKGIEELFLDLTRRMI------LNSSGVVIHSNTNTTGQTTNRS 191
Query: 295 GVVEITP 301
+ I P
Sbjct: 192 ERIPIVP 198
>SGD|S000005615 [details] [associations]
symbol:VPS21 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=ISS;IDA;IMP] [GO:0005741 "mitochondrial
outer membrane" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005770 "late endosome" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IMP] [GO:0006623 "protein
targeting to vacuole" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000005615 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:BK006948 GO:GO:0005741 GO:GO:0003924 GO:GO:0006897
GO:GO:0010008 GO:GO:0005770 GO:GO:0000011 EMBL:X94335
PROSITE:PS51419 GO:GO:0006623 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 EMBL:X76173
EMBL:Z29338 EMBL:Z74997 PIR:S43399 RefSeq:NP_014732.1 PDB:1EK0
PDBsum:1EK0 ProteinModelPortal:P36017 SMR:P36017 DIP:DIP-3801N
IntAct:P36017 MINT:MINT-507539 STRING:P36017 PaxDb:P36017
PeptideAtlas:P36017 PRIDE:P36017 EnsemblFungi:YOR089C GeneID:854256
KEGG:sce:YOR089C CYGD:YOR089c OMA:RTIKYEI OrthoDB:EOG47WRXZ
EvolutionaryTrace:P36017 NextBio:976182 Genevestigator:P36017
GermOnline:YOR089C Uniprot:P36017
Length = 210
Score = 365 (133.5 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 69/166 (41%), Positives = 109/166 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMYY
Sbjct: 18 VGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNREE 233
RNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ R+V REE
Sbjct: 78 RNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREE 137
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
++ G ++ETSA + + DVFL + + + + E +++S
Sbjct: 138 GEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAEEQNSAS 183
>ZFIN|ZDB-GENE-041114-161 [details] [associations]
symbol:rab22a "RAB22A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041114-161 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OMA:TDTNPPS HSSP:P10114 EMBL:BX323459
EMBL:AY398404 IPI:IPI00486571 UniGene:Dr.143739 SMR:Q6TGV2
STRING:Q6TGV2 Ensembl:ENSDART00000022581 InParanoid:Q6TGV2
Uniprot:Q6TGV2
Length = 196
Score = 364 (133.2 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 71/158 (44%), Positives = 103/158 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ SI + ETSA I +VF +S+ + L E
Sbjct: 135 DYADSIHAIFIETSAKNAININEVFTQISERIPVLDAE 172
>GENEDB_PFALCIPARUM|PFA0335w [details] [associations]
symbol:Rab5c "Rab5c, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844501 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
OMA:GTQGKIC GenomeReviews:AL844501_GR RefSeq:XP_001350999.1
ProteinModelPortal:Q8I274 SMR:Q8I274 PRIDE:Q8I274
EnsemblProtists:PFA0335w:mRNA GeneID:813204 KEGG:pfa:PFA_0335w
ProtClustDB:CLSZ2444920 Uniprot:Q8I274
Length = 214
Score = 358 (131.1 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 76/199 (38%), Positives = 118/199 (59%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
++K+ S NS F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 NEKYETNQSYNST--KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
Query: 268 ICLSQESLHTSSLRVYDSD 286
+E ++++ +++
Sbjct: 189 PLHKKEQERCPAIQINNTE 207
>UNIPROTKB|Q8I274 [details] [associations]
symbol:Rab5c "Rab5c, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844501 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
OMA:GTQGKIC GenomeReviews:AL844501_GR RefSeq:XP_001350999.1
ProteinModelPortal:Q8I274 SMR:Q8I274 PRIDE:Q8I274
EnsemblProtists:PFA0335w:mRNA GeneID:813204 KEGG:pfa:PFA_0335w
ProtClustDB:CLSZ2444920 Uniprot:Q8I274
Length = 214
Score = 358 (131.1 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 76/199 (38%), Positives = 118/199 (59%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
++K+ S NS F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 NEKYETNQSYNST--KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
Query: 268 ICLSQESLHTSSLRVYDSD 286
+E ++++ +++
Sbjct: 189 PLHKKEQERCPAIQINNTE 207
>UNIPROTKB|Q5ZHW4 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 EMBL:AJ721020 IPI:IPI00586484 RefSeq:NP_001186777.1
UniGene:Gga.17824 ProteinModelPortal:Q5ZHW4 SMR:Q5ZHW4 PRIDE:Q5ZHW4
GeneID:100529061 KEGG:gga:100529061 CTD:5869 KO:K07888
Uniprot:Q5ZHW4
Length = 215
Score = 357 (130.7 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 69/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>POMBASE|SPAC6F6.15 [details] [associations]
symbol:ypt5 "GTPase Ypt5" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IC] [GO:0031338 "regulation of vesicle fusion"
evidence=IMP] [GO:0033157 "regulation of intracellular protein
transport" evidence=IC] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC6F6.15 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006995 eggNOG:COG1100
GO:GO:0070314 KO:K07976 GO:GO:0033157 HOGENOM:HOG000233968
OMA:GTQGKIC GO:GO:0031338 OrthoDB:EOG4S1XHJ EMBL:Z22220 PIR:A47733
PIR:S34729 RefSeq:NP_593907.1 ProteinModelPortal:P36586 SMR:P36586
STRING:P36586 PRIDE:P36586 EnsemblFungi:SPAC6F6.15.1 GeneID:2542248
KEGG:spo:SPAC6F6.15 NextBio:20803313 Uniprot:P36586
Length = 211
Score = 355 (130.0 bits), Expect = 6.2e-32, P = 6.2e-32
Identities = 72/179 (40%), Positives = 113/179 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + EN VKL++WDTAGQER++S+APMY
Sbjct: 25 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREVNREEA 234
YRNAN A++V+DITQ S K+W+KEL+R E +V+ + GNK DL + R V + +A
Sbjct: 85 YRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADA 144
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ ++ETSA + + ++F ++K L ++ L+ + V N++ A P
Sbjct: 145 EAYAAEANLLFFETSAKTAENVNELFTAIAKKLPL--EDKLNQARGAVNRGVNLSEARP 201
>UNIPROTKB|E2QW69 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:AAEX03006917 RefSeq:XP_531627.2
ProteinModelPortal:E2QW69 SMR:E2QW69 PRIDE:E2QW69
Ensembl:ENSCAFT00000000142 GeneID:474394 KEGG:cfa:474394
NextBio:20850419 Uniprot:E2QW69
Length = 215
Score = 354 (129.7 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|P61020 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
EMBL:CH471054 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0030742 GO:GO:0019003
HOVERGEN:HBG009351 EMBL:AC034102 OrthoDB:EOG4Z0B6M CTD:5869
KO:K07888 EMBL:X54871 EMBL:AF498937 EMBL:AK292597 EMBL:AK296517
EMBL:BX537408 EMBL:BC032740 EMBL:BC040143 EMBL:BC050558
EMBL:BC056422 EMBL:BC065298 IPI:IPI00017344 PIR:A43925
RefSeq:NP_001238965.1 RefSeq:NP_001238966.1 RefSeq:NP_002859.1
UniGene:Hs.157659 PDB:2HEI PDBsum:2HEI ProteinModelPortal:P61020
SMR:P61020 IntAct:P61020 STRING:P61020 PhosphoSite:P61020
DMDM:46577637 PaxDb:P61020 PRIDE:P61020 DNASU:5869
Ensembl:ENST00000360299 Ensembl:ENST00000448789
Ensembl:ENST00000553116 GeneID:5869 KEGG:hsa:5869 UCSC:uc001siv.3
GeneCards:GC12P056368 HGNC:HGNC:9784 HPA:CAB010224 MIM:179514
neXtProt:NX_P61020 PharmGKB:PA34144 InParanoid:P61020 OMA:GTQGKIC
PhylomeDB:P61020 ChiTaRS:RAB5B EvolutionaryTrace:P61020
GenomeRNAi:5869 NextBio:22794 ArrayExpress:P61020 Bgee:P61020
CleanEx:HS_RAB5B Genevestigator:P61020 Uniprot:P61020
Length = 215
Score = 354 (129.7 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|Q5RBG1 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
PROSITE:PS51419 GO:GO:0007032 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 CTD:5869 KO:K07888 OMA:GTQGKIC EMBL:CR858688
RefSeq:NP_001125512.1 UniGene:Pab.4552 ProteinModelPortal:Q5RBG1
SMR:Q5RBG1 PRIDE:Q5RBG1 GeneID:100172422 KEGG:pon:100172422
InParanoid:Q5RBG1 Uniprot:Q5RBG1
Length = 215
Score = 354 (129.7 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>MGI|MGI:105938 [details] [associations]
symbol:Rab5b "RAB5B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030100 "regulation of endocytosis"
evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030742 "GTP-dependent protein binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:105938
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0031901 GO:GO:0015031 GO:GO:0003924
GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:X84239 EMBL:AK081251 EMBL:M79311 IPI:IPI00116563
PIR:JH0640 PIR:S65932 RefSeq:NP_803130.1 UniGene:Mm.12815
UniGene:Mm.471965 UniGene:Mm.490984 ProteinModelPortal:P61021
SMR:P61021 STRING:P61021 PhosphoSite:P61021 PaxDb:P61021
PRIDE:P61021 Ensembl:ENSMUST00000000727 GeneID:19344 KEGG:mmu:19344
InParanoid:P61021 NextBio:296355 Bgee:P61021 CleanEx:MM_RAB5B
Genevestigator:P61021 GermOnline:ENSMUSG00000000711
GermOnline:ENSMUSG00000074931 Uniprot:P61021
Length = 215
Score = 354 (129.7 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|Q5ZLB8 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015629 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AADN02018996
EMBL:AJ719816 IPI:IPI00593951 RefSeq:NP_001026038.1
UniGene:Gga.7554 SMR:Q5ZLB8 Ensembl:ENSGALT00000012215
GeneID:419318 KEGG:gga:419318 InParanoid:Q5ZLB8 NextBio:20822399
Uniprot:Q5ZLB8
Length = 194
Score = 352 (129.0 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVMEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>UNIPROTKB|F1MHP4 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 GeneTree:ENSGT00640000091139 OMA:TDTNPPS
EMBL:DAAA02036338 IPI:IPI00854462 UniGene:Bt.19047
Ensembl:ENSBTAT00000024031 Uniprot:F1MHP4
Length = 194
Score = 349 (127.9 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAVFVETSAKNAININELFIEISR 164
>UNIPROTKB|Q9UL26 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IEP] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CH471077 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0016023 GO:GO:0010008
GO:GO:0001726 PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AL035455
HOGENOM:HOG000233968 CTD:57403 KO:K07891 OrthoDB:EOG4CRM14
EMBL:AF125104 EMBL:AF091034 EMBL:AJ276210 EMBL:BT007046
EMBL:AK091180 EMBL:BC015710 EMBL:BC063457 IPI:IPI00007756
RefSeq:NP_065724.1 UniGene:Hs.529044 ProteinModelPortal:Q9UL26
SMR:Q9UL26 IntAct:Q9UL26 MINT:MINT-5003659 STRING:Q9UL26
PhosphoSite:Q9UL26 DMDM:13633614 PaxDb:Q9UL26 PRIDE:Q9UL26
DNASU:57403 Ensembl:ENST00000244040 GeneID:57403 KEGG:hsa:57403
UCSC:uc002xyz.3 GeneCards:GC20P056884 HGNC:HGNC:9764 MIM:612966
neXtProt:NX_Q9UL26 PharmGKB:PA34112 InParanoid:Q9UL26 OMA:TDTNPPS
PhylomeDB:Q9UL26 GenomeRNAi:57403 NextBio:63508 ArrayExpress:Q9UL26
Bgee:Q9UL26 CleanEx:HS_RAB22A Genevestigator:Q9UL26
GermOnline:ENSG00000124209 Uniprot:Q9UL26
Length = 194
Score = 348 (127.6 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>MGI|MGI:105072 [details] [associations]
symbol:Rab22a "RAB22A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105072 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0016023 GO:GO:0010008 GO:GO:0001726
PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AJ311124 EMBL:AK031667
EMBL:AK146594 EMBL:AK150617 EMBL:BC006596 EMBL:M79304
IPI:IPI00116729 PIR:JH0644 RefSeq:NP_077756.2 UniGene:Mm.275304
PDB:1YVD PDB:1Z0J PDBsum:1YVD PDBsum:1Z0J ProteinModelPortal:P35285
SMR:P35285 STRING:P35285 PhosphoSite:P35285 PaxDb:P35285
PRIDE:P35285 Ensembl:ENSMUST00000029024 GeneID:19334 KEGG:mmu:19334
InParanoid:P35285 ChiTaRS:RAB22A EvolutionaryTrace:P35285
NextBio:296319 Bgee:P35285 CleanEx:MM_RAB22A Genevestigator:P35285
GermOnline:ENSMUSG00000027519 Uniprot:P35285
Length = 194
Score = 348 (127.6 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 66/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>FB|FBgn0014010 [details] [associations]
symbol:Rab5 "Rab5" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;NAS] [GO:0003924 "GTPase
activity" evidence=ISS;NAS] [GO:0048488 "synaptic vesicle
endocytosis" evidence=TAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=IMP;TAS] [GO:0005769 "early endosome"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007349 "cellularization" evidence=IMP] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0035220
"wing disc development" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0034058 "endosomal vesicle fusion" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0046664 "dorsal closure, amnioserosa morphology
change" evidence=IMP] [GO:0048803 "imaginal disc-derived male
genitalia morphogenesis" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008285
GO:GO:0007264 GO:GO:0007067 EMBL:AE014134 GO:GO:0005811
GO:GO:0015031 GO:GO:0003924 GO:GO:0050803 GO:GO:0035220
GO:GO:0030100 GO:GO:0007298 GO:GO:0048813 GO:GO:0007409
GO:GO:0007220 GO:GO:0005769 eggNOG:COG1100 GO:GO:0006325
GO:GO:0016321 GO:GO:0007349 GO:GO:0035088 GO:GO:0046664
GO:GO:0016189 GO:GO:0048803 HSSP:P35278
GeneTree:ENSGT00640000091139 OMA:VDLQESN ChiTaRS:RAB5A KO:K07889
GO:GO:0034058 EMBL:AY060343 EMBL:AY081180 EMBL:AY081181
EMBL:AB035353 EMBL:AB035671 EMBL:BK000968 RefSeq:NP_523457.1
RefSeq:NP_722795.1 RefSeq:NP_722796.1 RefSeq:NP_722797.1
RefSeq:NP_722798.1 RefSeq:NP_722799.1 UniGene:Dm.6724 SMR:Q9V3I2
MINT:MINT-334912 STRING:Q9V3I2 EnsemblMetazoa:FBtr0077793
EnsemblMetazoa:FBtr0077794 EnsemblMetazoa:FBtr0077795
EnsemblMetazoa:FBtr0077796 EnsemblMetazoa:FBtr0077797
EnsemblMetazoa:FBtr0077798 EnsemblMetazoa:FBtr0330668
EnsemblMetazoa:FBtr0330669 EnsemblMetazoa:FBtr0330670 GeneID:33418
KEGG:dme:Dmel_CG3664 UCSC:CG3664-RA CTD:33418 FlyBase:FBgn0014010
InParanoid:Q9V3I2 OrthoDB:EOG4Z34WR GenomeRNAi:33418 NextBio:783450
Uniprot:Q9V3I2
Length = 219
Score = 347 (127.2 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMYY
Sbjct: 40 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYY 99
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 100 RGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>UNIPROTKB|A5GHL0 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:CT009685
RefSeq:NP_001116646.1 UniGene:Ssc.10486 ProteinModelPortal:A5GHL0
SMR:A5GHL0 Ensembl:ENSSSCT00000008229 GeneID:100144535
KEGG:ssc:100144535 ArrayExpress:A5GHL0 Uniprot:A5GHL0
Length = 194
Score = 347 (127.2 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVLERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>WB|WBGene00004279 [details] [associations]
symbol:rab-21 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 EMBL:Z66499 HOGENOM:HOG000233968
HSSP:P20339 KO:K07890 GeneTree:ENSGT00640000091439 PIR:T24268
RefSeq:NP_495854.1 ProteinModelPortal:Q22045 SMR:Q22045
IntAct:Q22045 STRING:Q22045 PaxDb:Q22045 EnsemblMetazoa:T01B7.3.1
EnsemblMetazoa:T01B7.3.2 GeneID:187932 KEGG:cel:CELE_T01B7.3
UCSC:T01B7.3 CTD:187932 WormBase:T01B7.3 InParanoid:Q22045
OMA:GARYLET NextBio:937000 Uniprot:Q22045
Length = 207
Score = 345 (126.5 bits), Expect = 8.0e-31, P = 8.0e-31
Identities = 75/176 (42%), Positives = 110/176 (62%)
Query: 117 VGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS H+S TI ASF +NV + + L +WDTAGQE++ ++ P+Y
Sbjct: 23 VGKSSLVLRFVENKFSCKHLS-TIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR +N LLVFDIT SF +K WV E+K + + +VGNK DLE R+V R++A
Sbjct: 82 YRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAE 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI----CLSQESLHTS-SLRVYDSD 286
Y++S G Y ETSA + GI D F +++ +I S E T+ S+R+ D+D
Sbjct: 142 AYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTEPPSTNRSIRLIDND 197
>UNIPROTKB|Q5ZIP7 [details] [associations]
symbol:RAB5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
[GO:0051489 "regulation of filopodium assembly" evidence=IEA]
[GO:2000286 "receptor internalization involved in canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0045121 GO:GO:0030139 GO:GO:0001726 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:AADN02001071 EMBL:AADN02001072 EMBL:AJ720737
IPI:IPI00596261 RefSeq:NP_001006363.1 UniGene:Gga.21473 SMR:Q5ZIP7
STRING:Q5ZIP7 Ensembl:ENSGALT00000018393 GeneID:420649
KEGG:gga:420649 InParanoid:Q5ZIP7 NextBio:20823533 Uniprot:Q5ZIP7
Length = 215
Score = 344 (126.2 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 68/165 (41%), Positives = 101/165 (61%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ + ETSA + ++F+ ++K L ++ SS R
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGASSAR 195
>WB|WBGene00004268 [details] [associations]
symbol:rab-5 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0007028 "cytoplasm organization"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0008219 "cell
death" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0006952
"defense response" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008105
"asymmetric protein localization" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0090386 "phagosome maturation involved
in apoptotic cell clearance" evidence=IMP] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0045335 GO:GO:0006952
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0000003
GO:GO:0009306 GO:GO:0000910 GO:GO:0030163 GO:GO:0008105
GO:GO:0005769 eggNOG:COG1100 GO:GO:0090386 GO:GO:0007028 KO:K07976
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
EMBL:Z81516 PIR:T21442 RefSeq:NP_492481.1 ProteinModelPortal:P91857
SMR:P91857 IntAct:P91857 STRING:P91857 PaxDb:P91857
EnsemblMetazoa:F26H9.6.1 EnsemblMetazoa:F26H9.6.2 GeneID:172755
KEGG:cel:CELE_F26H9.6 UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6
InParanoid:P91857 OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 344 (126.2 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER+ S+APMYY
Sbjct: 30 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SF K WVKEL+R +V+ + GNK D+ + R V EEA
Sbjct: 90 RGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANA 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+F+ ++K L
Sbjct: 150 YAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|P91857 [details] [associations]
symbol:rab-5 "Protein RAB-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005938 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0006915 GO:GO:0007264
GO:GO:0045335 GO:GO:0006952 GO:GO:0002119 GO:GO:0018996
GO:GO:0003924 GO:GO:0000003 GO:GO:0009306 GO:GO:0000910
GO:GO:0030163 GO:GO:0008105 GO:GO:0005769 eggNOG:COG1100
GO:GO:0090386 GO:GO:0007028 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 GeneTree:ENSGT00640000091139 EMBL:Z81516 PIR:T21442
RefSeq:NP_492481.1 ProteinModelPortal:P91857 SMR:P91857
IntAct:P91857 STRING:P91857 PaxDb:P91857 EnsemblMetazoa:F26H9.6.1
EnsemblMetazoa:F26H9.6.2 GeneID:172755 KEGG:cel:CELE_F26H9.6
UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6 InParanoid:P91857
OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 344 (126.2 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER+ S+APMYY
Sbjct: 30 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SF K WVKEL+R +V+ + GNK D+ + R V EEA
Sbjct: 90 RGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANA 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+F+ ++K L
Sbjct: 150 YAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|F1MNI4 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030742 "GTP-dependent protein binding" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0030100 GO:GO:0030139 GO:GO:0007032
GeneTree:ENSGT00640000091139 OMA:GTQGKIC EMBL:DAAA02013536
IPI:IPI00691250 ProteinModelPortal:F1MNI4
Ensembl:ENSBTAT00000018777 Uniprot:F1MNI4
Length = 229
Score = 343 (125.8 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 68/153 (44%), Positives = 97/153 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIG--ASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIG A+F T + + + VK ++WDTAGQER+ S+APM
Sbjct: 43 VGKSSLVLRFVKGQFHEYQESTIGVIAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPM 102
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 103 YYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEA 162
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 163 QAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 195
>UNIPROTKB|Q58DS9 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN EMBL:BT021518 EMBL:BC118226 IPI:IPI00694198
RefSeq:NP_001029915.1 UniGene:Bt.5451 ProteinModelPortal:Q58DS9
SMR:Q58DS9 STRING:Q58DS9 PRIDE:Q58DS9 Ensembl:ENSBTAT00000015581
GeneID:613749 KEGG:bta:613749 CTD:5878 InParanoid:Q58DS9 KO:K07889
NextBio:20898747 Uniprot:Q58DS9
Length = 216
Score = 343 (125.8 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 65/151 (43%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F+ ++K L
Sbjct: 152 YAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|F2Z560 [details] [associations]
symbol:RAB5C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN CTD:5878
KO:K07889 EMBL:CU856598 RefSeq:NP_001231183.1 UniGene:Ssc.19390
UniGene:Ssc.82797 ProteinModelPortal:F2Z560 SMR:F2Z560 PRIDE:F2Z560
Ensembl:ENSSSCT00000018954 GeneID:100523862 KEGG:ssc:100523862
ArrayExpress:F2Z560 Uniprot:F2Z560
Length = 216
Score = 343 (125.8 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 65/151 (43%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F+ ++K L
Sbjct: 152 YAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P51154 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0001726 "ruffle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0016023 GO:GO:0010008 GO:GO:0005770
GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22820
PIR:S40208 RefSeq:NP_001003208.1 UniGene:Cfa.45045
ProteinModelPortal:P51154 SMR:P51154 GeneID:403864 KEGG:cfa:403864
CTD:57403 InParanoid:P51154 KO:K07891 OrthoDB:EOG4CRM14
NextBio:20817357 Uniprot:P51154
Length = 194
Score = 342 (125.4 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 66/150 (44%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQE FR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>ZFIN|ZDB-GENE-040426-2593 [details] [associations]
symbol:rab5b "RAB5B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-2593 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5869
KO:K07888 HSSP:P61586 EMBL:BX511265 EMBL:BC066634 IPI:IPI00867975
RefSeq:NP_998050.1 UniGene:Dr.38267 SMR:Q6NYD6 STRING:Q6NYD6
Ensembl:ENSDART00000021065 GeneID:405821 KEGG:dre:405821
InParanoid:Q6NYD6 OMA:KKMPKTD NextBio:20817785 Uniprot:Q6NYD6
Length = 214
Score = 342 (125.4 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 29 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 89 YYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKRLVEYEEA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ G + ETSA + ++FL ++K
Sbjct: 149 QTYAEDTGLLFMETSAKTAMNVNELFLAIAK 179
>UNIPROTKB|Q0IIG7 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122651
IPI:IPI00693824 RefSeq:NP_001069654.1 UniGene:Bt.24043
ProteinModelPortal:Q0IIG7 SMR:Q0IIG7 STRING:Q0IIG7 PRIDE:Q0IIG7
GeneID:539764 KEGG:bta:539764 CTD:5868 InParanoid:Q0IIG7 KO:K07887
OrthoDB:EOG4Z0B6M NextBio:20878203 Uniprot:Q0IIG7
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P18066 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0005811 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5868
KO:K07887 OrthoDB:EOG4Z0B6M EMBL:M35520 PIR:A30413
RefSeq:NP_001003317.1 UniGene:Cfa.40292 ProteinModelPortal:P18066
IntAct:P18066 STRING:P18066 PRIDE:P18066 Ensembl:ENSCAFT00000009363
GeneID:404008 KEGG:cfa:404008 InParanoid:P18066 OMA:EPQNTGA
NextBio:20817495 Uniprot:P18066
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P51147 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0042470 "melanosome" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:Z27110 PIR:S65933
RefSeq:NP_001003261.1 UniGene:Cfa.3802 ProteinModelPortal:P51147
SMR:P51147 STRING:P51147 PRIDE:P51147 Ensembl:ENSCAFT00000024768
GeneID:403941 KEGG:cfa:403941 InParanoid:P51147 NextBio:20817431
Uniprot:P51147
Length = 216
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P20339 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030139
"endocytic vesicle" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0001726 "ruffle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
[GO:0051489 "regulation of filopodium assembly" evidence=IDA]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0010008 "endosome
membrane" evidence=TAS] [GO:2000286 "receptor internalization
involved in canonical Wnt receptor signaling pathway" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_604 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0007399 GO:GO:0030154 GO:GO:0031901
EMBL:CH471055 GO:GO:0015629
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0015031
GO:GO:0007596 GO:GO:0003924 GO:GO:0045121 GO:GO:0010008
GO:GO:0030139 GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 PDB:3MJH PDBsum:3MJH
HOGENOM:HOG000233968 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:M28215 EMBL:AF464088 EMBL:AF498936 EMBL:AK312618
EMBL:CR536492 EMBL:BC001267 EMBL:BC018288 IPI:IPI00023510
PIR:F34323 RefSeq:NP_004153.2 UniGene:Hs.475663 PDB:1N6H PDB:1N6I
PDB:1N6K PDB:1N6L PDB:1N6N PDB:1N6O PDB:1N6P PDB:1N6R PDB:1R2Q
PDB:1TU3 PDB:1TU4 PDBsum:1N6H PDBsum:1N6I PDBsum:1N6K PDBsum:1N6L
PDBsum:1N6N PDBsum:1N6O PDBsum:1N6P PDBsum:1N6R PDBsum:1R2Q
PDBsum:1TU3 PDBsum:1TU4 ProteinModelPortal:P20339 SMR:P20339
DIP:DIP-380N IntAct:P20339 MINT:MINT-209361 STRING:P20339
PhosphoSite:P20339 DMDM:1346958 PaxDb:P20339 PRIDE:P20339
DNASU:5868 Ensembl:ENST00000273047 GeneID:5868 KEGG:hsa:5868
UCSC:uc003cbn.3 GeneCards:GC03P019963 HGNC:HGNC:9783 HPA:CAB004567
MIM:179512 neXtProt:NX_P20339 PharmGKB:PA34143 InParanoid:P20339
PhylomeDB:P20339 ChiTaRS:RAB5A EvolutionaryTrace:P20339
GenomeRNAi:5868 NextBio:22790 ArrayExpress:P20339 Bgee:P20339
CleanEx:HS_RAB5A Genevestigator:P20339 GermOnline:ENSG00000144566
Uniprot:P20339
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P51148 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 EMBL:CH471152 GO:GO:0003924 GO:GO:0030100
GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AC105024 EMBL:AC099811
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:U18420 EMBL:U11293 EMBL:AF141304 EMBL:AF498938 EMBL:AK310234
EMBL:CR541901 EMBL:BT019484 EMBL:AC003104 EMBL:BC106039
EMBL:BC114439 IPI:IPI00016339 IPI:IPI01021644 PIR:I38703
RefSeq:NP_001238968.1 RefSeq:NP_004574.2 RefSeq:NP_958842.1
UniGene:Hs.650382 ProteinModelPortal:P51148 SMR:P51148
IntAct:P51148 STRING:P51148 PhosphoSite:P51148 DMDM:38258923
PaxDb:P51148 PeptideAtlas:P51148 PRIDE:P51148 DNASU:5878
Ensembl:ENST00000346213 Ensembl:ENST00000393860
Ensembl:ENST00000547517 Ensembl:ENST00000565751 GeneID:5878
KEGG:hsa:5878 UCSC:uc002hyz.3 GeneCards:GC17M040276 HGNC:HGNC:9785
HPA:HPA003426 MIM:604037 neXtProt:NX_P51148 PharmGKB:PA34145
InParanoid:P51148 PhylomeDB:P51148 GenomeRNAi:5878 NextBio:22840
ArrayExpress:P51148 Bgee:P51148 CleanEx:HS_RAB5C
Genevestigator:P51148 GermOnline:ENSG00000108774 Uniprot:P51148
Length = 216
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|I3LFZ8 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030742 "GTP-dependent protein binding" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0030100 GO:GO:0030139 GO:GO:0007032
GeneTree:ENSGT00640000091139 OMA:GTQGKIC Ensembl:ENSSSCT00000028386
Uniprot:I3LFZ8
Length = 229
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 68/153 (44%), Positives = 97/153 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIG--ASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIG A+F T + + + VK ++WDTAGQER+ S+APM
Sbjct: 43 VGKSSLVLRFVKGQFHEYQESTIGVIAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPM 102
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 103 YYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEA 162
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 163 QAYADDNTLLFMETSAKTAMNVNDLFLAIAKKL 195
>UNIPROTKB|Q06AU6 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9823 "Sus
scrofa" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
CTD:5868 KO:K07887 EMBL:DQ917629 RefSeq:NP_001116652.1
UniGene:Ssc.53977 ProteinModelPortal:Q06AU6 SMR:Q06AU6
GeneID:100144499 KEGG:ssc:100144499 Uniprot:Q06AU6
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P61271 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AB062987 ProteinModelPortal:P61271 PRIDE:P61271 Uniprot:P61271
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|Q5R7L7 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0005811 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 HSSP:P35278 GeneTree:ENSGT00640000091139
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:CR860097 RefSeq:NP_001127529.1
UniGene:Pab.17478 ProteinModelPortal:Q5R7L7 SMR:Q5R7L7 PRIDE:Q5R7L7
Ensembl:ENSPPYT00000009823 GeneID:100174605 KEGG:pon:100174605
InParanoid:Q5R7L7 Uniprot:Q5R7L7
Length = 216
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>MGI|MGI:105926 [details] [associations]
symbol:Rab5a "RAB5A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=IDA] [GO:0003924
"GTPase activity" evidence=ISO;IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005769 "early endosome" evidence=ISO;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0019001 "guanyl nucleotide binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045921 "positive
regulation of exocytosis" evidence=ISO] [GO:0051489 "regulation of
filopodium assembly" evidence=ISO] [GO:2000286 "receptor
internalization involved in canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 EMBL:CH466559 GO:GO:0045921 GO:GO:2000286
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA ChiTaRS:RAB5A EMBL:AB232593 EMBL:AK002631 EMBL:AK008198
EMBL:AK010495 EMBL:AK081999 EMBL:AK150296 EMBL:AK150346
EMBL:AK150405 EMBL:AK151066 EMBL:AK153131 EMBL:AK159706
EMBL:BC004842 EMBL:BC034370 EMBL:BC096481 IPI:IPI00132410
RefSeq:NP_080163.1 UniGene:Mm.329123 ProteinModelPortal:Q9CQD1
SMR:Q9CQD1 IntAct:Q9CQD1 STRING:Q9CQD1 PhosphoSite:Q9CQD1
PaxDb:Q9CQD1 PRIDE:Q9CQD1 Ensembl:ENSMUST00000017975 GeneID:271457
KEGG:mmu:271457 InParanoid:Q9CQD1 NextBio:393462 Bgee:Q9CQD1
CleanEx:MM_RAB5A Genevestigator:Q9CQD1
GermOnline:ENSMUSG00000017831 Uniprot:Q9CQD1
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>MGI|MGI:105306 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0007032
"endosome organization" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105306 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0015031
GO:GO:0003924 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:BC023027 EMBL:BC027378 EMBL:BC029678 EMBL:M79312
IPI:IPI00224518 PIR:JH0641 RefSeq:NP_077776.2 UniGene:Mm.29829
PDB:1HUQ PDB:1Z07 PDB:1Z0D PDBsum:1HUQ PDBsum:1Z07 PDBsum:1Z0D
ProteinModelPortal:P35278 SMR:P35278 IntAct:P35278 STRING:P35278
PhosphoSite:P35278 PaxDb:P35278 PRIDE:P35278
Ensembl:ENSMUST00000107364 GeneID:19345 KEGG:mmu:19345
EvolutionaryTrace:P35278 NextBio:296361 Bgee:P35278
CleanEx:MM_RAB5C Genevestigator:P35278
GermOnline:ENSMUSG00000019173 Uniprot:P35278
Length = 216
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>SGD|S000004252 [details] [associations]
symbol:YPT6 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006886 "intracellular protein transport"
evidence=IGI;TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=TAS] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;TAS] [GO:0003924 "GTPase activity"
evidence=ISS;IDA;TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000004252 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
EMBL:BK006945 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0042147
EMBL:U17244 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OMA:FKWIDEV OrthoDB:EOG44BFBD
EMBL:X59598 EMBL:AY557936 PIR:S51399 RefSeq:NP_013363.1
ProteinModelPortal:Q99260 SMR:Q99260 DIP:DIP-5577N IntAct:Q99260
MINT:MINT-491690 STRING:Q99260 PaxDb:Q99260 PRIDE:Q99260
EnsemblFungi:YLR262C GeneID:850966 KEGG:sce:YLR262C CYGD:YLR262c
NextBio:967454 Genevestigator:Q99260 GermOnline:YLR262C
Uniprot:Q99260
Length = 215
Score = 341 (125.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 71/189 (37%), Positives = 115/189 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K DE ++LC+VGNK+DL R+++ EE
Sbjct: 80 IRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEG 139
Query: 235 FHYSKSIGGTYY-ETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS ++ +F ++K L E ++ S + DS+N SAN
Sbjct: 140 EKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL----PEFQNSESTPL-DSENANSANQ 194
Query: 294 R--GVVEIT 300
GV++I+
Sbjct: 195 NKPGVIDIS 203
>ASPGD|ASPL0000015781 [details] [associations]
symbol:srgH species:162425 "Emericella nidulans"
[GO:0005769 "early endosome" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0044088 "regulation of vacuole organization"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0031338 "regulation of vesicle fusion"
evidence=IEA] [GO:0070314 "G1 to G0 transition" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 eggNOG:COG1100 EMBL:AACD01000062 KO:K07976
HOGENOM:HOG000233968 OMA:PTSRTCC OrthoDB:EOG4S1XHJ
RefSeq:XP_661446.1 ProteinModelPortal:Q5B6I8 SMR:Q5B6I8
EnsemblFungi:CADANIAT00004864 GeneID:2873265 KEGG:ani:AN3842.2
Uniprot:Q5B6I8
Length = 218
Score = 340 (124.7 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 67/156 (42%), Positives = 103/156 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APMY
Sbjct: 28 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMY 87
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVNR 231
YRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R +
Sbjct: 88 YRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTENPDKRAIPT 147
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 148 ADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>ZFIN|ZDB-GENE-030131-139 [details] [associations]
symbol:rab5aa "RAB5A, member RAS oncogene family,
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-030131-139
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:RAVDFQV EMBL:BX950869 EMBL:BC047803 EMBL:BC063966
IPI:IPI00484834 RefSeq:NP_958893.1 UniGene:Dr.7401 SMR:Q7ZUW5
STRING:Q7ZUW5 Ensembl:ENSDART00000034124 Ensembl:ENSDART00000129730
GeneID:337737 KEGG:dre:337737 CTD:337737 InParanoid:Q7ZUW5
NextBio:20812391 Uniprot:Q7ZUW5
Length = 216
Score = 340 (124.7 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 69/177 (38%), Positives = 105/177 (59%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 92 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQS 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S R D +A P
Sbjct: 152 YADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETAQP 208
>CGD|CAL0000352 [details] [associations]
symbol:VPS21 species:5476 "Candida albicans" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0007038 "endocytosed protein
transport to vacuole" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0006623 "protein targeting to vacuole" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0000352 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0071216 GO:GO:0036180 GO:GO:0009405 GO:GO:0005770
EMBL:AACQ01000073 EMBL:AACQ01000072 eggNOG:COG1100
EMBL:AACQ01000109 EMBL:AACQ01000108 GO:GO:0007038 KO:K07976
HOGENOM:HOG000233968 RefSeq:XP_714175.1 RefSeq:XP_714216.1
RefSeq:XP_716121.1 RefSeq:XP_716205.1 ProteinModelPortal:Q59X89
SMR:Q59X89 STRING:Q59X89 GeneID:3642092 GeneID:3642203
GeneID:3644132 GeneID:3644161 KEGG:cal:CaO19.13721
KEGG:cal:CaO19.589 KEGG:cal:CaO19.6364 KEGG:cal:CaO19.8221
Uniprot:Q59X89
Length = 216
Score = 339 (124.4 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 78/192 (40%), Positives = 114/192 (59%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMYY
Sbjct: 21 VGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESSR 227
RNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL E+ R
Sbjct: 81 RNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDDSAEDGETLR 140
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV-SK--GLICLSQESLHTSSLRVYD 284
+V+ EE + G ++ETSA + +VF+ + SK + E+ S+ R D
Sbjct: 141 KVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTVTGGEAQEGSNGRRID 200
Query: 285 -SDNITSAN-PR 294
+ N +AN PR
Sbjct: 201 LTANTDNANAPR 212
>UNIPROTKB|Q59X89 [details] [associations]
symbol:VPS211 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0005770 "late
endosome" evidence=IDA] [GO:0007038 "endocytosed protein transport
to vacuole" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0000352 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
GO:GO:0005770 EMBL:AACQ01000073 EMBL:AACQ01000072 eggNOG:COG1100
EMBL:AACQ01000109 EMBL:AACQ01000108 GO:GO:0007038 KO:K07976
HOGENOM:HOG000233968 RefSeq:XP_714175.1 RefSeq:XP_714216.1
RefSeq:XP_716121.1 RefSeq:XP_716205.1 ProteinModelPortal:Q59X89
SMR:Q59X89 STRING:Q59X89 GeneID:3642092 GeneID:3642203
GeneID:3644132 GeneID:3644161 KEGG:cal:CaO19.13721
KEGG:cal:CaO19.589 KEGG:cal:CaO19.6364 KEGG:cal:CaO19.8221
Uniprot:Q59X89
Length = 216
Score = 339 (124.4 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 78/192 (40%), Positives = 114/192 (59%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMYY
Sbjct: 21 VGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESSR 227
RNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL E+ R
Sbjct: 81 RNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDDSAEDGETLR 140
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV-SK--GLICLSQESLHTSSLRVYD 284
+V+ EE + G ++ETSA + +VF+ + SK + E+ S+ R D
Sbjct: 141 KVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTVTGGEAQEGSNGRRID 200
Query: 285 -SDNITSAN-PR 294
+ N +AN PR
Sbjct: 201 LTANTDNANAPR 212
>UNIPROTKB|O88565 [details] [associations]
symbol:Rab5a "Protein Rab5a" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620936 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
HSSP:P20339 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M OMA:EPQNTGA
EMBL:CH474184 EMBL:AF072935 EMBL:BC161848 IPI:IPI00210733
RefSeq:NP_073183.1 UniGene:Rn.44477 SMR:O88565 IntAct:O88565
MINT:MINT-4584734 STRING:O88565 Ensembl:ENSRNOT00000016813
GeneID:64633 KEGG:rno:64633 InParanoid:O88565 NextBio:613600
Genevestigator:O88565 Uniprot:O88565
Length = 215
Score = 338 (124.0 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SF+ K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>TAIR|locus:2153202 [details] [associations]
symbol:RHA1 "RAB homolog 1" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005774 "vacuolar
membrane" evidence=IMP] [GO:0007034 "vacuolar transport"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0007034 PROSITE:PS51419 eggNOG:COG1100 EMBL:AB019224
KO:K07976 HOGENOM:HOG000233968 EMBL:X59152 EMBL:Z22958
EMBL:AF389298 EMBL:AY097362 IPI:IPI00532371 PIR:S23727
RefSeq:NP_199326.1 UniGene:At.23631 ProteinModelPortal:P31582
SMR:P31582 IntAct:P31582 STRING:P31582 PaxDb:P31582 PRIDE:P31582
EnsemblPlants:AT5G45130.1 GeneID:834549 KEGG:ath:AT5G45130
TAIR:At5g45130 InParanoid:P31582 OMA:QCCGGGN PhylomeDB:P31582
ProtClustDB:CLSN2685695 Genevestigator:P31582 GermOnline:AT5G45130
Uniprot:P31582
Length = 200
Score = 338 (124.0 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 66/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT SF K WV+EL+ + +V+ + GNK DL +R+V+ EEA
Sbjct: 79 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA ++D+F ++K L
Sbjct: 139 EIYAQENSLFFMETSAKTATNVKDIFYEIAKRL 171
>RGD|2319287 [details] [associations]
symbol:LOC100361891 "RAB5A, member RAS oncogene family-like"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0019001 "guanyl nucleotide binding"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=ISO] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] [GO:0051489 "regulation of filopodium assembly"
evidence=ISO] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=ISO]
REFSEQ:XM_003751377 Ncbi:XP_003751425
Length = 215
Score = 337 (123.7 bits), Expect = 6.1e-30, P = 6.1e-30
Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SF+ K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 RGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 YADDNSLLFMETSAKTPMNVNEIFMAIAKKL 181
>CGD|CAL0003771 [details] [associations]
symbol:orf19.7216 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006623 "protein targeting
to vacuole" evidence=IEA] [GO:0031338 "regulation of vesicle
fusion" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0070314 "G1 to G0 transition" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 CGD:CAL0003771
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 EMBL:AACQ01000092 KO:K07976 HOGENOM:HOG000233968
RefSeq:XP_715017.1 ProteinModelPortal:Q59ZX5 GeneID:3643346
KEGG:cal:CaO19.7216 Uniprot:Q59ZX5
Length = 221
Score = 336 (123.3 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/158 (44%), Positives = 98/158 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F TIGA+F T I + E++ +K ++WDTAGQER++S+APM
Sbjct: 23 VGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIPESETTIKFEIWDTAGQERYKSLAPM 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNANAAL V+DIT SF + W+KELK+ E +V+ +VGNK+DL+ REV E
Sbjct: 83 YYRNANAALCVYDITSRSSFQKAQDWIKELKKQAPEGIVIALVGNKSDLDDEREVESSEV 142
Query: 235 FHY---SKSIGGTYY--ETSALQDQGIEDVFLNVSKGL 267
Y S G + E SA G+ DVF + + L
Sbjct: 143 QEYVQEQNSDGCSIITAECSAKSGDGVLDVFNKIGRAL 180
>ZFIN|ZDB-GENE-040122-3 [details] [associations]
symbol:rab5ab "RAB5A, member RAS oncogene family, b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040122-3 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:CR848668 EMBL:BC049057 IPI:IPI00511527
RefSeq:NP_957264.1 UniGene:Dr.77063 SMR:Q7ZUG4 STRING:Q7ZUG4
Ensembl:ENSDART00000015694 GeneID:393945 KEGG:dre:393945 CTD:393945
InParanoid:Q7ZUG4 NextBio:20814917 Uniprot:Q7ZUG4
Length = 216
Score = 336 (123.3 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 92 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQS 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTSMNVSEIFMAIAKKL 182
>TAIR|locus:2123010 [details] [associations]
symbol:ARA7 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005768 "endosome"
evidence=IDA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005886
GO:GO:0005774 GO:GO:0007264 GO:GO:0031901 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0015031 GO:GO:0006897
PROSITE:PS51419 EMBL:AL161551 GO:GO:0005769 eggNOG:COG1100
EMBL:AL021768 KO:K07976 HOGENOM:HOG000233968 OMA:VDLQESN
ProtClustDB:CLSN2685695 EMBL:AB038491 EMBL:AF370309 EMBL:AY052670
EMBL:AY063095 IPI:IPI00520138 PIR:T06157 RefSeq:NP_193699.1
UniGene:At.2030 PDB:2EFC PDB:2EFD PDB:2EFE PDB:2EFH PDBsum:2EFC
PDBsum:2EFD PDBsum:2EFE PDBsum:2EFH ProteinModelPortal:Q9SN68
SMR:Q9SN68 IntAct:Q9SN68 STRING:Q9SN68 PaxDb:Q9SN68 PRIDE:Q9SN68
EnsemblPlants:AT4G19640.1 GeneID:827706 KEGG:ath:AT4G19640
TAIR:At4g19640 InParanoid:Q9SN68 PhylomeDB:Q9SN68
EvolutionaryTrace:Q9SN68 Genevestigator:Q9SN68 Uniprot:Q9SN68
Length = 200
Score = 334 (122.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 63/153 (41%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFD+T SF K WV+EL+ + +V+ + GNK+DL +R+V E+A
Sbjct: 79 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++++F +++ L
Sbjct: 139 QTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>ZFIN|ZDB-GENE-031118-30 [details] [associations]
symbol:rab5c "RAB5C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030100 "regulation of
endocytosis" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-30
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0001525 GO:GO:0030100 GO:GO:0016337
GO:GO:0001702 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
CTD:5878 KO:K07889 OMA:QCCGGGN EMBL:BX005093 EMBL:BC045466
EMBL:BC065634 IPI:IPI00499049 RefSeq:NP_958909.1 UniGene:Dr.5030
SMR:Q7ZVP2 IntAct:Q7ZVP2 STRING:Q7ZVP2 Ensembl:ENSDART00000034536
GeneID:386807 KEGG:dre:386807 InParanoid:Q7ZVP2 OrthoDB:EOG42FSJK
NextBio:20814025 Uniprot:Q7ZVP2
Length = 221
Score = 334 (122.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 33 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYY 92
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 93 RGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 152
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 153 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>UNIPROTKB|F1NST3 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN
IPI:IPI00600808 EMBL:AADN02068703 EMBL:AADN02068704
Ensembl:ENSGALT00000005312 Ensembl:ENSGALT00000039914
Uniprot:F1NST3
Length = 216
Score = 333 (122.3 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 63/151 (41%), Positives = 95/151 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKTSLVLRFVKGQFPEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 92 RGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQT 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|Q98932 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889 EMBL:Y07811 IPI:IPI00600808
RefSeq:NP_989856.1 UniGene:Gga.2500 ProteinModelPortal:Q98932
SMR:Q98932 STRING:Q98932 PRIDE:Q98932 GeneID:395197 KEGG:gga:395197
InParanoid:Q98932 NextBio:20815287 Uniprot:Q98932
Length = 216
Score = 332 (121.9 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 62/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 92 RGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQT 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>MGI|MGI:1858203 [details] [associations]
symbol:Rab25 "RAB25, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031143
"pseudopodium" evidence=ISO] [GO:0031268 "pseudopodium
organization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858203
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008284 GO:GO:0031410 GO:GO:0016023 GO:GO:0031143
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0031260
GO:GO:0031268 HOGENOM:HOG000233968 OMA:RTDEDYN CTD:57111
GeneTree:ENSGT00690000101664 KO:K07906 OrthoDB:EOG4NS3CK
EMBL:AF119675 EMBL:AF119676 EMBL:AK003260 EMBL:BC006624
IPI:IPI00123514 RefSeq:NP_058595.2 UniGene:Mm.26994
ProteinModelPortal:Q9WTL2 SMR:Q9WTL2 IntAct:Q9WTL2 MINT:MINT-219202
STRING:Q9WTL2 PhosphoSite:Q9WTL2 PaxDb:Q9WTL2 PRIDE:Q9WTL2
Ensembl:ENSMUST00000008745 GeneID:53868 KEGG:mmu:53868
InParanoid:Q9WTL2 NextBio:310713 Bgee:Q9WTL2 CleanEx:MM_RAB25
Genevestigator:Q9WTL2 GermOnline:ENSMUSG00000008601 Uniprot:Q9WTL2
Length = 213
Score = 332 (121.9 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 69/169 (40%), Positives = 103/169 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL----SQESLHTSSL 280
++++ G + ETSAL +E F V K + Q S TS++
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAI 190
>ASPGD|ASPL0000074235 [details] [associations]
symbol:srgG species:162425 "Emericella nidulans"
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:BN001303 eggNOG:COG1100 EMBL:AACD01000084
KO:K07976 HOGENOM:HOG000233968 OMA:RTIKYEI OrthoDB:EOG47WRXZ
RefSeq:XP_662519.1 ProteinModelPortal:Q5B3G5 SMR:Q5B3G5
EnsemblFungi:CADANIAT00005485 GeneID:2872716 KEGG:ani:AN4915.2
Uniprot:Q5B3G5
Length = 258
Score = 298 (110.0 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 58/121 (47%), Positives = 80/121 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K ++ +K ++WDTAGQERF S+APMYY
Sbjct: 26 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPSRTIKFEIWDTAGQERFASLAPMYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-----ESSREVNR 231
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL E+ E R
Sbjct: 86 RNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALVGNKLDLTNDGGETPAETER 145
Query: 232 E 232
E
Sbjct: 146 E 146
Score = 57 (25.1 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 226 SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V EA Y+ G ++ETSA + DVF ++ +
Sbjct: 169 ARKVPTREASTYADEEGLLFFETSAKTGLNVTDVFTAIANAI 210
>RGD|1308447 [details] [associations]
symbol:Rab25 "RAB25, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031143 "pseudopodium" evidence=IEA;ISO]
[GO:0031268 "pseudopodium organization" evidence=IEA;ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1308447 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008284 GO:GO:0031410 GO:GO:0031143 eggNOG:COG1100
HOVERGEN:HBG009351 EMBL:CH473976 GO:GO:0031268 HOGENOM:HOG000233968
OMA:RTDEDYN CTD:57111 GeneTree:ENSGT00690000101664 KO:K07906
OrthoDB:EOG4NS3CK EMBL:BC168745 IPI:IPI00368614
RefSeq:NP_001101157.2 UniGene:Rn.7929 STRING:B5DEP2
Ensembl:ENSRNOT00000032355 GeneID:310632 KEGG:rno:310632
UCSC:RGD:1308447 NextBio:662264 Genevestigator:B5DEP2
Uniprot:B5DEP2
Length = 213
Score = 331 (121.6 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 70/169 (41%), Positives = 105/169 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC-LS---QESLHTSSL 280
++++ G + ETSAL +E F V K + +S Q S TS++
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTSAI 190
>UNIPROTKB|P57735 [details] [associations]
symbol:RAB25 "Ras-related protein Rab-25" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0031260
"pseudopodium membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031143 "pseudopodium" evidence=IDA] [GO:0031268
"pseudopodium organization" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008284 GO:GO:0031410 GO:GO:0016023 GO:GO:0031143
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 EMBL:AL355388
HOVERGEN:HBG009351 GO:GO:0031260 GO:GO:0031268 HOGENOM:HOG000233968
OMA:RTDEDYN CTD:57111 KO:K07906 OrthoDB:EOG4NS3CK EMBL:AF083124
EMBL:AF274025 EMBL:BC004416 EMBL:BC009831 EMBL:BC033322
IPI:IPI00027993 RefSeq:NP_065120.2 UniGene:Hs.632469 PDB:2OIL
PDB:3TSO PDBsum:2OIL PDBsum:3TSO ProteinModelPortal:P57735
SMR:P57735 STRING:P57735 PhosphoSite:P57735 DMDM:46577696
PaxDb:P57735 PRIDE:P57735 DNASU:57111 Ensembl:ENST00000361084
GeneID:57111 KEGG:hsa:57111 UCSC:uc001fnc.3 GeneCards:GC01P156030
HGNC:HGNC:18238 HPA:HPA010872 MIM:612942 neXtProt:NX_P57735
PharmGKB:PA34115 InParanoid:P57735 EvolutionaryTrace:P57735
GenomeRNAi:57111 NextBio:62967 Bgee:P57735 CleanEx:HS_RAB25
Genevestigator:P57735 GermOnline:ENSG00000132698 Uniprot:P57735
Length = 213
Score = 330 (121.2 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 69/169 (40%), Positives = 106/169 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC-LS---QESLHTSSL 280
++++ G + ETSAL +E F V K + +S Q S+ T+++
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAI 190
>UNIPROTKB|Q58DW6 [details] [associations]
symbol:RAB25 "Ras-related protein Rab-25" species:9913 "Bos
taurus" [GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=ISS]
[GO:0031143 "pseudopodium" evidence=ISS] [GO:0031268 "pseudopodium
organization" evidence=ISS] [GO:0031260 "pseudopodium membrane"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0008284 GO:GO:0031410 GO:GO:0016023
GO:GO:0031143 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0031260 GO:GO:0031268 HOGENOM:HOG000233968 EMBL:BT021481
EMBL:BC120091 IPI:IPI00710347 RefSeq:NP_001017936.1
UniGene:Bt.20180 ProteinModelPortal:Q58DW6 SMR:Q58DW6 PRIDE:Q58DW6
Ensembl:ENSBTAT00000025170 GeneID:506482 KEGG:bta:506482 CTD:57111
GeneTree:ENSGT00690000101664 InParanoid:Q58DW6 KO:K07906
OMA:KKACCIS OrthoDB:EOG4NS3CK NextBio:20867626 Uniprot:Q58DW6
Length = 213
Score = 329 (120.9 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL SREV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>UNIPROTKB|P46629 [details] [associations]
symbol:RAB25 "Ras-related protein Rab-25" species:9986
"Oryctolagus cuniculus" [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0031143 "pseudopodium"
evidence=ISS] [GO:0031268 "pseudopodium organization" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0008284 GO:GO:0031410
GO:GO:0031143 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0031268 HOGENOM:HOG000233968 OrthoDB:EOG4NS3CK EMBL:L03303
PIR:A48500 UniGene:Ocu.1987 ProteinModelPortal:P46629 SMR:P46629
STRING:P46629 Uniprot:P46629
Length = 213
Score = 329 (120.9 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 66/163 (40%), Positives = 100/163 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
++++ G + ETSAL +E F V K + + + S
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNS 184
>WB|WBGene00008672 [details] [associations]
symbol:F11A5.4 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0019915 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P20339 GeneTree:ENSGT00690000101805
EMBL:Z92830 PIR:T20750 RefSeq:NP_507084.1 UniGene:Cel.4153
ProteinModelPortal:O17789 SMR:O17789 EnsemblMetazoa:F11A5.4
GeneID:184331 KEGG:cel:CELE_F11A5.4 UCSC:F11A5.4 CTD:184331
WormBase:F11A5.4 InParanoid:O17789 NextBio:924372 Uniprot:O17789
Length = 203
Score = 329 (120.9 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 66/148 (44%), Positives = 99/148 (66%)
Query: 116 GVGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGK+++++R+IGK F S H S T+G F + + KVKL VWDT GQERFRS+
Sbjct: 16 GVGKSNLLLRFIGKPFDSIHPS-TLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGS 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A ALLV+DIT SF ++ W+ +L+R D +V+ ++GNK+DLE+ REV +EE
Sbjct: 75 YYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEG 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLN 262
+++ G + E SA ++ +E+ F+N
Sbjct: 135 EAFAREFGLIFMEISAKTNEYVEEAFVN 162
>UNIPROTKB|F1RLQ0 [details] [associations]
symbol:RAB25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0031268
"pseudopodium organization" evidence=IEA] [GO:0031143
"pseudopodium" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008284 GO:GO:0031410 GO:GO:0031143
GO:GO:0031268 GeneTree:ENSGT00690000101664 KO:K07906 OMA:HADDSAV
EMBL:CU302298 RefSeq:XP_001928392.1 UniGene:Ssc.45041
Ensembl:ENSSSCT00000007117 GeneID:100152692 KEGG:ssc:100152692
Uniprot:F1RLQ0
Length = 213
Score = 328 (120.5 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 70/178 (39%), Positives = 107/178 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
++++ G + ETSAL +E F V K + + SS R ++ + SA P
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSS-RT-NAITLGSAQP 197
>UNIPROTKB|E2RQ15 [details] [associations]
symbol:RAB25 "Ras-related protein Rab-25" species:9615
"Canis lupus familiaris" [GO:0031260 "pseudopodium membrane"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0031268 "pseudopodium organization" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0008284 GO:GO:0016023 PROSITE:PS51419
GO:GO:0031260 GO:GO:0031268 CTD:57111 GeneTree:ENSGT00690000101664
KO:K07906 OMA:KKACCIS RefSeq:XP_547540.3 ProteinModelPortal:E2RQ15
Ensembl:ENSCAFT00000026699 GeneID:490418 KEGG:cfa:490418
NextBio:20863445 Uniprot:E2RQ15
Length = 213
Score = 326 (119.8 bits), Expect = 9.9e-29, P = 9.9e-29
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLHQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>DICTYBASE|DDB_G0271984 [details] [associations]
symbol:rab5A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0271984
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000007
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P20339
RefSeq:XP_645357.1 ProteinModelPortal:Q86JP3 SMR:Q86JP3
PRIDE:Q86JP3 EnsemblProtists:DDB0229401 GeneID:8618246
KEGG:ddi:DDB_G0271984 OMA:VDLQESN ProtClustDB:CLSZ2431305
Uniprot:Q86JP3
Length = 201
Score = 324 (119.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 65/152 (42%), Positives = 98/152 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ ++APMYY
Sbjct: 20 VGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYY 79
Query: 177 RNANAALLVFDITQYHSFA-AIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DI SF AIK WVKEL+R +V+ + GNK DL + R+V EA
Sbjct: 80 RGAQAAIVVYDIRSEDSFERAIK-WVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQ 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F+ ++K L
Sbjct: 139 QYAEENGLLFMETSAKTSQNVNELFVEIAKKL 170
>GENEDB_PFALCIPARUM|PF13_0119 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 324 (119.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 72/181 (39%), Positives = 107/181 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV-KLQVWDTAGQERFRSMAPM 174
GVGK++++ R+ F+ TIG F T I + NK+ K Q+WDTAGQER+R++
Sbjct: 21 GVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSA 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A ALLV+DIT+ +SF I+ W+KEL+ N D +V+ +VGNK+DL+ R +N +A
Sbjct: 81 YYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
Y+K + ETSAL+ +E F + + + Q+ T + DN+ S PR
Sbjct: 141 TQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKN-----DDNL-SIQPR 194
Query: 295 G 295
G
Sbjct: 195 G 195
>UNIPROTKB|Q76NM4 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 324 (119.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 72/181 (39%), Positives = 107/181 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV-KLQVWDTAGQERFRSMAPM 174
GVGK++++ R+ F+ TIG F T I + NK+ K Q+WDTAGQER+R++
Sbjct: 21 GVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSA 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A ALLV+DIT+ +SF I+ W+KEL+ N D +V+ +VGNK+DL+ R +N +A
Sbjct: 81 YYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
Y+K + ETSAL+ +E F + + + Q+ T + DN+ S PR
Sbjct: 141 TQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKN-----DDNL-SIQPR 194
Query: 295 G 295
G
Sbjct: 195 G 195
>MGI|MGI:104640 [details] [associations]
symbol:Rab17 "RAB17, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:104640 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0016324
GO:GO:0043025 GO:GO:0030425 GO:GO:0016323 GO:GO:0051963
PROSITE:PS51419 GO:GO:0050773 GO:GO:0032456 GO:GO:0046847
GO:GO:0055038 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:64284
KO:K07909 OMA:KLLFMET OrthoDB:EOG4JT06J GO:GO:0002415 EMBL:X70804
EMBL:AK009707 EMBL:AK075591 EMBL:BC013170 EMBL:BC051071 EMBL:M79307
IPI:IPI00116768 PIR:A46434 RefSeq:NP_001153197.2 RefSeq:NP_033024.1
UniGene:Mm.279780 ProteinModelPortal:P35292 SMR:P35292
MINT:MINT-1340501 STRING:P35292 PhosphoSite:P35292 PaxDb:P35292
PRIDE:P35292 Ensembl:ENSMUST00000027529 Ensembl:ENSMUST00000131428
GeneID:19329 KEGG:mmu:19329 InParanoid:P35292 NextBio:296301
Bgee:P35292 CleanEx:MM_RAB17 Genevestigator:P35292
GermOnline:ENSMUSG00000026304 Uniprot:P35292
Length = 214
Score = 324 (119.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 66/173 (38%), Positives = 114/173 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ + FS+ + PT+G +FFT +++G + +KL++WDTAGQE+++S+ +Y+
Sbjct: 30 VGKTSLALRYMKQDFSN-VLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+++L++ +V+ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGK 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
+++S + ETSA + + ++F V++ L+ Q + T S R + + +
Sbjct: 149 EFAESKSLLFMETSAKLNYQVSEIFNTVAQELL---QRAGDTGSSRPQEGEAV 198
>UNIPROTKB|Q9H0T7 [details] [associations]
symbol:RAB17 "Ras-related protein Rab-17" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0002415
"immunoglobulin transcytosis in epithelial cells mediated by
polymeric immunoglobulin receptor" evidence=ISS] [GO:0032401
"establishment of melanosome localization" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0032456
"endocytic recycling" evidence=ISS] [GO:0045056 "transcytosis"
evidence=ISS] [GO:0046847 "filopodium assembly" evidence=ISS]
[GO:0050773 "regulation of dendrite development" evidence=ISS]
[GO:0051489 "regulation of filopodium assembly" evidence=ISS]
[GO:0051963 "regulation of synapse assembly" evidence=ISS]
[GO:0016323 "basolateral plasma membrane" evidence=ISS] [GO:0016324
"apical plasma membrane" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042470 "melanosome" evidence=ISS] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISS] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 EMBL:CH471063 GO:GO:0043025
GO:GO:0030425 GO:GO:0016323 GO:GO:0051963 PROSITE:PS51419
GO:GO:0050773 GO:GO:0032456 GO:GO:0046847 GO:GO:0055038
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AL136645 EMBL:AK022600
EMBL:CR457282 EMBL:AC104667 EMBL:BC000929 EMBL:BC050426
IPI:IPI00007866 RefSeq:NP_071894.1 UniGene:Hs.44278
ProteinModelPortal:Q9H0T7 SMR:Q9H0T7 IntAct:Q9H0T7
MINT:MINT-1422334 STRING:Q9H0T7 PhosphoSite:Q9H0T7 DMDM:37999892
PaxDb:Q9H0T7 PRIDE:Q9H0T7 DNASU:64284 Ensembl:ENST00000264601
GeneID:64284 KEGG:hsa:64284 UCSC:uc002vwz.2 CTD:64284
GeneCards:GC02M238499 HGNC:HGNC:16523 HPA:HPA035176 MIM:602206
neXtProt:NX_Q9H0T7 PharmGKB:PA34105 InParanoid:Q9H0T7 KO:K07909
OMA:KLLFMET OrthoDB:EOG4JT06J PhylomeDB:Q9H0T7 GenomeRNAi:64284
NextBio:66211 ArrayExpress:Q9H0T7 Bgee:Q9H0T7 CleanEx:HS_RAB17
Genevestigator:Q9H0T7 GermOnline:ENSG00000124839 GO:GO:0002415
Uniprot:Q9H0T7
Length = 212
Score = 322 (118.4 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 68/159 (42%), Positives = 103/159 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVD--EPLVLCVVGNKTDLESSREVNREEA 234
R ANAALLV+DIT+ SF + W+K+L+ + E LV+ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVM-LVGNKTDLSQEREVTFQEG 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
++ S + ETSA + + +VF V++ L+ S E
Sbjct: 148 KEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDE 186
>UNIPROTKB|F1NWF1 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:DYKFLFK
EMBL:AADN02004733 EMBL:AADN02004734 IPI:IPI00589217
Ensembl:ENSGALT00000027882 Uniprot:F1NWF1
Length = 199
Score = 321 (118.1 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 15 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 75 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAA 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 135 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 173
>UNIPROTKB|Q17QB7 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9913 "Bos
taurus" [GO:0031985 "Golgi cisterna" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005801 "cis-Golgi network"
evidence=ISS] [GO:0007030 "Golgi organization" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC118448
IPI:IPI00709312 RefSeq:NP_001069697.1 UniGene:Bt.91675
ProteinModelPortal:Q17QB7 SMR:Q17QB7 Ensembl:ENSBTAT00000003135
GeneID:540583 KEGG:bta:540583 CTD:27314 InParanoid:Q17QB7 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G NextBio:20878714 Uniprot:Q17QB7
Length = 203
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>UNIPROTKB|E2RG98 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
EMBL:AAEX03012758 RefSeq:XP_533993.1 ProteinModelPortal:E2RG98
SMR:E2RG98 Ensembl:ENSCAFT00000007438 GeneID:476787 KEGG:cfa:476787
NextBio:20852396 Uniprot:E2RG98
Length = 203
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>UNIPROTKB|Q15771 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
[GO:0031985 "Golgi cisterna" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005795 "Golgi stack" evidence=TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005802 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0007030 GO:GO:0005801 GO:GO:0031985
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:27314 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:U57092 EMBL:AF498956
EMBL:CR542106 EMBL:BC014213 IPI:IPI00302030 PIR:JC4962
RefSeq:NP_055303.2 UniGene:Hs.40758 PDB:2EW1 PDBsum:2EW1
ProteinModelPortal:Q15771 SMR:Q15771 IntAct:Q15771 STRING:Q15771
PhosphoSite:Q15771 DMDM:38258937 PaxDb:Q15771 PRIDE:Q15771
DNASU:27314 Ensembl:ENST00000260056 Ensembl:ENST00000527633
Ensembl:ENST00000533486 GeneID:27314 KEGG:hsa:27314 UCSC:uc001ozu.3
GeneCards:GC11M082692 HGNC:HGNC:9770 MIM:605693 neXtProt:NX_Q15771
PharmGKB:PA34121 InParanoid:Q15771 PhylomeDB:Q15771
EvolutionaryTrace:Q15771 GenomeRNAi:27314 NextBio:50315
ArrayExpress:Q15771 Bgee:Q15771 CleanEx:HS_RAB30
Genevestigator:Q15771 GermOnline:ENSG00000137502 Uniprot:Q15771
Length = 203
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>MGI|MGI:1923235 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005801
"cis-Golgi network" evidence=ISO] [GO:0005802 "trans-Golgi network"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031985 "Golgi cisterna" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923235
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:27314
KO:K07917 OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:AF399756 EMBL:AK017185
EMBL:AK142206 EMBL:BC017550 IPI:IPI00331205 RefSeq:NP_083770.2
UniGene:Mm.389966 ProteinModelPortal:Q923S9 SMR:Q923S9
STRING:Q923S9 PhosphoSite:Q923S9 PaxDb:Q923S9 PRIDE:Q923S9
Ensembl:ENSMUST00000032879 Ensembl:ENSMUST00000107180 GeneID:75985
KEGG:mmu:75985 InParanoid:Q923S9 NextBio:344381 Bgee:Q923S9
CleanEx:MM_RAB30 Genevestigator:Q923S9
GermOnline:ENSMUSG00000030643 Uniprot:Q923S9
Length = 203
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>UNIPROTKB|D4AA97 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1309507 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473956 OMA:DYKFLFK OrthoDB:EOG43XV4G
IPI:IPI00781739 UniGene:Rn.161854 SMR:D4AA97
Ensembl:ENSRNOT00000055380 Uniprot:D4AA97
Length = 203
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 63/159 (39%), Positives = 98/159 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+S++ Y ETSA + +E +FL+++ LI ++++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>UNIPROTKB|E1C6J7 [details] [associations]
symbol:RAB17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 CTD:64284 KO:K07909 OMA:KLLFMET
GeneTree:ENSGT00640000091139 EMBL:AADN02034487 IPI:IPI00574832
RefSeq:XP_421874.2 UniGene:Gga.8154 Ensembl:ENSGALT00000006196
GeneID:424017 KEGG:gga:424017 NextBio:20826403 Uniprot:E1C6J7
Length = 213
Score = 318 (117.0 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 62/153 (40%), Positives = 98/153 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ RY+ F + PT+G SFFT I + +KL++WDTAGQE++ S+ +YY
Sbjct: 30 VGKSSLAYRYVKNDFKESL-PTVGCSFFTQTIQLETATIKLEIWDTAGQEKYHSVCHLYY 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRN-VDEPLVLCVVGNKTDLESSREVNREEAF 235
R A+AALLV+D+T + K W+ EL++ + + +V+ +VGNKTDL REV E+
Sbjct: 89 RGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVGNKTDLADEREVAAEDGE 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++S + ETSA + + DVF+ V++ L+
Sbjct: 149 EFARSRSLLFMETSAKSNHQVNDVFMAVAQELL 181
>FB|FBgn0015791 [details] [associations]
symbol:Rab14 "Rab14" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 HSSP:P07560 CTD:51552 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA ChiTaRS:RAB14 UniGene:Dm.6742 GeneID:34840
KEGG:dme:Dmel_CG4212 FlyBase:FBgn0015791 GenomeRNAi:34840
NextBio:790484 RefSeq:NP_788056.1 ProteinModelPortal:Q86BK8
SMR:Q86BK8 STRING:Q86BK8 PRIDE:Q86BK8 EnsemblMetazoa:FBtr0080627
UCSC:CG4212-RB InParanoid:Q86BK8 PhylomeDB:Q86BK8
ArrayExpress:Q86BK8 Bgee:Q86BK8 Uniprot:Q86BK8
Length = 239
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 65/160 (40%), Positives = 101/160 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F + TIG F T I V + K+KLQ+WDTAGQERFR++
Sbjct: 44 MGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRAVTRS 103
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK+DLES+REV EE
Sbjct: 104 YYRGAAGALMVYDITRRSTYNHLSSWLTDT-RNLTNPSTVIFLIGNKSDLESTREVTYEE 162
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
A ++ G + E SA+ Q +E+ FL ++ + QE
Sbjct: 163 AKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQE 202
>UNIPROTKB|F1N8Z3 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101805
IPI:IPI00582079 OMA:KIGPQHS EMBL:AADN02021993 EMBL:AADN02021994
Ensembl:ENSGALT00000024914 Ensembl:ENSGALT00000036736
Uniprot:F1N8Z3
Length = 197
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 60
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 61 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 120
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 121 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 160
>UNIPROTKB|Q90965 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862 KO:K07877
OrthoDB:EOG41G354 EMBL:X84220 IPI:IPI00582079 PIR:S52325
RefSeq:NP_990559.1 UniGene:Gga.16919 HSSP:P61019
ProteinModelPortal:Q90965 SMR:Q90965 PRIDE:Q90965 GeneID:396153
KEGG:gga:396153 InParanoid:Q90965 NextBio:20816209
ArrayExpress:Q90965 Uniprot:Q90965
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|G1K288 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 OMA:KIGPQHS EMBL:AAEX03015816
Ensembl:ENSCAFT00000011465 Uniprot:G1K288
Length = 232
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 36 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 95
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 96 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 155
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 156 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 195
>UNIPROTKB|P61105 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0042470 "melanosome" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0000139 GO:GO:0016192 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0033116 HOVERGEN:HBG009351 HOGENOM:HOG000233968
EMBL:M35521 PIR:A39648 RefSeq:NP_001003318.1 UniGene:Cfa.44676
ProteinModelPortal:P61105 SMR:P61105 STRING:P61105 PRIDE:P61105
GeneID:404009 KEGG:cfa:404009 CTD:5862 InParanoid:P61105 KO:K07877
OrthoDB:EOG41G354 BindingDB:P61105 NextBio:20817496 Uniprot:P61105
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|P61019 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 Reactome:REACT_115566
GO:GO:0007264 GO:GO:0000139 Reactome:REACT_21300 GO:GO:0005789
GO:GO:0015031 GO:GO:0043025 GO:GO:0003924 PROSITE:PS51419
GO:GO:0006888 eggNOG:COG1100 GO:GO:0019003 EMBL:CH471068
GO:GO:0033116 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862
KO:K07877 OrthoDB:EOG41G354 OMA:KIGPQHS EMBL:X12953 EMBL:M28213
EMBL:AF498930 EMBL:BT019695 EMBL:AK297576 EMBL:AK312344
EMBL:AC068389 EMBL:AC079065 EMBL:BC008929 IPI:IPI00031169
IPI:IPI00794561 PIR:B34323 RefSeq:NP_001229573.1 RefSeq:NP_002856.1
UniGene:Hs.369017 PDB:1Z0A PDBsum:1Z0A ProteinModelPortal:P61019
SMR:P61019 DIP:DIP-316N IntAct:P61019 MINT:MINT-5001132
STRING:P61019 PhosphoSite:P61019 DMDM:46577636 PaxDb:P61019
PRIDE:P61019 DNASU:5862 Ensembl:ENST00000262646
Ensembl:ENST00000531289 GeneID:5862 KEGG:hsa:5862 UCSC:uc003xud.2
GeneCards:GC08P061429 HGNC:HGNC:9763 HPA:CAB018781 MIM:179509
neXtProt:NX_P61019 PharmGKB:PA162400618 PhylomeDB:P61019
BindingDB:P61019 ChiTaRS:RAB2A EvolutionaryTrace:P61019
GenomeRNAi:5862 NextBio:22766 ArrayExpress:P61019 Bgee:P61019
CleanEx:HS_RAB2A Genevestigator:P61019 GermOnline:ENSG00000104388
Uniprot:P61019
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|Q01971 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862 OrthoDB:EOG41G354
EMBL:X68071 PIR:S23979 RefSeq:NP_001095172.1 UniGene:Ocu.1928
ProteinModelPortal:Q01971 SMR:Q01971 GeneID:100009281
Uniprot:Q01971
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|Q4R4X6 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 GO:GO:0019003 GO:GO:0033116 HOVERGEN:HBG009351
HSSP:P61019 EMBL:AB169319 EMBL:AB169768 ProteinModelPortal:Q4R4X6
SMR:Q4R4X6 PRIDE:Q4R4X6 BindingDB:Q4R4X6 Uniprot:Q4R4X6
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|Q5R6B6 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264
GO:GO:0000139 GO:GO:0016192 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101805 CTD:5862 KO:K07877
HSSP:P61019 OMA:KIGPQHS EMBL:CR860575 RefSeq:NP_001126581.1
UniGene:Pab.18716 ProteinModelPortal:Q5R6B6 SMR:Q5R6B6 PRIDE:Q5R6B6
Ensembl:ENSPPYT00000021711 GeneID:100173573 KEGG:pon:100173573
InParanoid:Q5R6B6 BindingDB:Q5R6B6 Uniprot:Q5R6B6
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>MGI|MGI:1928750 [details] [associations]
symbol:Rab2a "RAB2A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1928750 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0043025 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862 KO:K07877
OrthoDB:EOG41G354 OMA:KIGPQHS ChiTaRS:RAB2A EMBL:X95403
EMBL:AK079071 EMBL:AK135421 EMBL:AK146179 EMBL:AK150030
EMBL:AK159607 EMBL:AK160333 EMBL:AK163320 IPI:IPI00137227
RefSeq:NP_067493.1 UniGene:Mm.397471 UniGene:Mm.467703
ProteinModelPortal:P53994 SMR:P53994 IntAct:P53994 STRING:P53994
PhosphoSite:P53994 PaxDb:P53994 PRIDE:P53994
Ensembl:ENSMUST00000060232 GeneID:59021 KEGG:mmu:59021
InParanoid:P53994 NextBio:314584 Bgee:P53994 CleanEx:MM_RAB2A
Genevestigator:P53994 GermOnline:ENSMUSG00000047187 Uniprot:P53994
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>ZFIN|ZDB-GENE-011212-2 [details] [associations]
symbol:rab2a "RAB2A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-011212-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 EMBL:CR450710 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00690000101805 CTD:5862 KO:K07877 OrthoDB:EOG41G354
OMA:KIGPQHS EMBL:CR847864 EMBL:BC044459 IPI:IPI00506330
RefSeq:NP_958862.1 UniGene:Dr.76947 SMR:Q803J3
Ensembl:ENSDART00000003940 GeneID:140617 KEGG:dre:140617
InParanoid:Q803J3 NextBio:20797028 Uniprot:Q803J3
Length = 212
Score = 317 (116.6 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 62/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|E1BC58 [details] [associations]
symbol:RAB2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045921 GeneTree:ENSGT00690000101805 CTD:84932
KO:K07878 EMBL:DAAA02028311 IPI:IPI00710123 RefSeq:NP_001179594.1
UniGene:Bt.105603 PRIDE:E1BC58 Ensembl:ENSBTAT00000061077
GeneID:528574 KEGG:bta:528574 OMA:ITXDLES NextBio:20874858
Uniprot:E1BC58
Length = 216
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + Q+ L
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL 175
>UNIPROTKB|E2RLX7 [details] [associations]
symbol:RAB2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045921 GeneTree:ENSGT00690000101805
OMA:RRDTFTH CTD:84932 KO:K07878 EMBL:AAEX03009855
RefSeq:XP_532625.2 ProteinModelPortal:E2RLX7
Ensembl:ENSCAFT00000038495 GeneID:475402 KEGG:cfa:475402
Uniprot:E2RLX7
Length = 216
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + Q+ L
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL 175
>UNIPROTKB|Q8WUD1 [details] [associations]
symbol:RAB2B "Ras-related protein Rab-2B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 EMBL:CH471078
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0045921 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:RRDTFTH OrthoDB:EOG41G354 EMBL:AF468652
EMBL:AK315354 EMBL:BC020839 IPI:IPI00102896 RefSeq:NP_116235.2
UniGene:Hs.22399 PDB:2A5J PDBsum:2A5J ProteinModelPortal:Q8WUD1
SMR:Q8WUD1 IntAct:Q8WUD1 STRING:Q8WUD1 PhosphoSite:Q8WUD1
DMDM:28436385 PaxDb:Q8WUD1 PRIDE:Q8WUD1 DNASU:84932
Ensembl:ENST00000397762 GeneID:84932 KEGG:hsa:84932 UCSC:uc010tls.2
CTD:84932 GeneCards:GC14M021927 H-InvDB:HIX0011509 HGNC:HGNC:20246
HPA:HPA050292 MIM:607466 neXtProt:NX_Q8WUD1 PharmGKB:PA134865942
InParanoid:Q8WUD1 KO:K07878 PhylomeDB:Q8WUD1
EvolutionaryTrace:Q8WUD1 GenomeRNAi:84932 NextBio:75368
ArrayExpress:Q8WUD1 Bgee:Q8WUD1 CleanEx:HS_RAB2B
Genevestigator:Q8WUD1 GermOnline:ENSG00000129472 Uniprot:Q8WUD1
Length = 216
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + Q+ L
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL 175
>UNIPROTKB|F1S8J6 [details] [associations]
symbol:RAB2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045921
GeneTree:ENSGT00690000101805 OMA:RRDTFTH KO:K07878 EMBL:FP340603
EMBL:CU695044 RefSeq:XP_003128612.1 Ensembl:ENSSSCT00000027841
GeneID:100516623 KEGG:ssc:100516623 Uniprot:F1S8J6
Length = 216
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + Q+ L
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL 175
>MGI|MGI:1923588 [details] [associations]
symbol:Rab2b "RAB2B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923588
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0000139 GO:GO:0016192 GO:GO:0005789 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0045921 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:RRDTFTH CTD:84932 KO:K07878 EMBL:AK038393
EMBL:AK044202 EMBL:AK160249 EMBL:AK160351 EMBL:BC046334
IPI:IPI00187430 RefSeq:NP_766189.1 UniGene:Mm.32870
ProteinModelPortal:P59279 SMR:P59279 STRING:P59279
PhosphoSite:P59279 PaxDb:P59279 PRIDE:P59279
Ensembl:ENSMUST00000022765 Ensembl:ENSMUST00000167116 GeneID:76338
KEGG:mmu:76338 InParanoid:P59279 ChiTaRS:RAB2B NextBio:344953
Bgee:P59279 CleanEx:MM_RAB2B Genevestigator:P59279
GermOnline:ENSMUSG00000022159 Uniprot:P59279
Length = 216
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 64/181 (35%), Positives = 110/181 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL---HTSS--LRVYDSDNITS 290
+++ G + ETSA +E+ ++N +K + Q+ L H + +++ +ITS
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSITS 195
Query: 291 A 291
+
Sbjct: 196 S 196
>RGD|1562478 [details] [associations]
symbol:Rab17 "RAB17, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1562478 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 OMA:KLLFMET
GeneTree:ENSGT00640000091139 IPI:IPI00767844
Ensembl:ENSRNOT00000026918 UCSC:RGD:1562478 Uniprot:F1M7S7
Length = 185
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 60/153 (39%), Positives = 105/153 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ + FS+ + PT+G +FFT +++G + +KL++WDTAGQE++ S+ +Y+
Sbjct: 2 VGKTSLALRYMKQDFSN-VLPTVGCAFFTKVVDLGSSSLKLEIWDTAGQEKYHSVCHLYF 60
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+++L++ +V+ +VGNKTDL REV +E
Sbjct: 61 RGANAALLVYDITRKDSFHKAQQWLEDLEKEFHPGEVVVMLVGNKTDLGEEREVTFQEGK 120
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++S + E+SA + + ++F +++ L+
Sbjct: 121 EFAESKSLLFMESSAKLNYQVSEIFNTIAQELL 153
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 68/179 (37%), Positives = 101/179 (56%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T I +K QVWDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI + ++ +++ W+ EL+ N D + + +VGNK+DL REV+ +EA
Sbjct: 83 YRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNITSANP 293
+S+ T+ ETSAL +E F N+ + +S+ S T DS+ T P
Sbjct: 143 EFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGPQTTIDSNTETIILP 201
>FB|FBgn0014009 [details] [associations]
symbol:Rab2 "Rab2" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0005525 "GTP
binding" evidence=IEA;NAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 EMBL:AE013599
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 KO:K07976 HSSP:P07560 GeneTree:ENSGT00690000101805
OMA:KIGPQHS EMBL:BT003315 EMBL:D84313 RefSeq:NP_477090.1
UniGene:Dm.3039 SMR:O18333 IntAct:O18333 MINT:MINT-954068
EnsemblMetazoa:FBtr0086124 GeneID:35577 KEGG:dme:Dmel_CG3269
UCSC:CG3269-RA CTD:35577 FlyBase:FBgn0014009 InParanoid:O18333
OrthoDB:EOG49ZW59 GenomeRNAi:35577 NextBio:794118 Uniprot:O18333
Length = 213
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DL+S REV +EE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGV 175
>UNIPROTKB|E9PMJ1 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00978752
ProteinModelPortal:E9PMJ1 SMR:E9PMJ1 Ensembl:ENST00000531021
ArrayExpress:E9PMJ1 Bgee:E9PMJ1 Uniprot:E9PMJ1
Length = 168
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 61/149 (40%), Positives = 92/149 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
+S++ Y ETSA + +E +FL+++
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLA 167
>TAIR|locus:2018698 [details] [associations]
symbol:RABA1i "RAB GTPase homolog A1I" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC010155 EMBL:AC007508
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 ProtClustDB:CLSN2679642
EMBL:DQ056467 IPI:IPI00536131 RefSeq:NP_174177.1 UniGene:At.51281
ProteinModelPortal:Q9S810 SMR:Q9S810 PaxDb:Q9S810 PRIDE:Q9S810
EnsemblPlants:AT1G28550.1 GeneID:839755 KEGG:ath:AT1G28550
TAIR:At1g28550 InParanoid:Q9S810 OMA:HDSRATI PhylomeDB:Q9S810
Genevestigator:Q9S810 Uniprot:Q9S810
Length = 218
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 68/180 (37%), Positives = 106/180 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FSH TIG F T I + VK Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++ W+KEL+ + D +V+ +VGNK DL R ++ EEA
Sbjct: 83 YRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAISTEEAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
+++ + ETSAL+ +++ F V L+Q S + D+ T+A P+G
Sbjct: 143 AFAERENTFFMETSALEAVNVDNAFTEV------LTQIYRVVSKKALEAGDDPTTALPKG 196
>TAIR|locus:2057624 [details] [associations]
symbol:ArRABA1h "RAB GTPase homolog A1H" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:U78721 KO:K07976
HOGENOM:HOG000233968 EMBL:DQ446594 IPI:IPI00538868 PIR:F84750
RefSeq:NP_180943.4 UniGene:At.66305 ProteinModelPortal:Q1PEX3
SMR:Q1PEX3 PaxDb:Q1PEX3 PRIDE:Q1PEX3 EnsemblPlants:AT2G33870.1
GeneID:817957 KEGG:ath:AT2G33870 TAIR:At2g33870 InParanoid:P93020
OMA:ELRTHAD PhylomeDB:Q1PEX3 ProtClustDB:CLSN2679642
Genevestigator:Q1PEX3 Uniprot:Q1PEX3
Length = 218
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 69/180 (38%), Positives = 105/180 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FSH TIG F T I V + VK Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++ W+KEL+ + D V+ +VGNK DL R ++ EE
Sbjct: 83 YRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTEEVK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
+++ + ETSAL+ +E+ F V L+Q S + D+ T+A P+G
Sbjct: 143 DFAERENTFFMETSALEAINVENAFTEV------LTQIYRVVSKKALDAGDDPTTALPKG 196
>ZFIN|ZDB-GENE-040718-250 [details] [associations]
symbol:rab30 "RAB30, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-250 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
OrthoDB:EOG43XV4G EMBL:CR538726 EMBL:BC076437 IPI:IPI00506069
RefSeq:NP_001002750.1 UniGene:Dr.32093 SMR:Q6DGB3
Ensembl:ENSDART00000055220 GeneID:437023 KEGG:dre:437023
InParanoid:Q6DGB3 NextBio:20831438 Uniprot:Q6DGB3
Length = 201
Score = 315 (115.9 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 65/153 (42%), Positives = 93/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 17 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQERFRSITQSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ + +V +VGNK DL REV R+ A
Sbjct: 77 YRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLADKREVLRQRAE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S Y ETSA + +E +FL+++ LI
Sbjct: 137 EFADSQSMLYLETSAKESDNVEKLFLDLACELI 169
>SGD|S000001722 [details] [associations]
symbol:YPT52 "Rab family GTPase, similar to Ypt51p and Ypt53p
and to mammalian rab5" species:4932 "Saccharomyces cerevisiae"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISS;IDA;IMP] [GO:0005770
"late endosome" evidence=IMP] [GO:0006623 "protein targeting to
vacuole" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001722
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006897 EMBL:BK006944
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006623 eggNOG:COG1100
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00600000084435
EMBL:X76174 EMBL:Z28239 PIR:S38083 RefSeq:NP_012939.1
ProteinModelPortal:P36018 SMR:P36018 DIP:DIP-2121N IntAct:P36018
MINT:MINT-541697 STRING:P36018 PaxDb:P36018 PeptideAtlas:P36018
PRIDE:P36018 EnsemblFungi:YKR014C GeneID:853884 KEGG:sce:YKR014C
CYGD:YKR014c OMA:PTSRTCC OrthoDB:EOG4S1XHJ NextBio:975177
Genevestigator:P36018 GermOnline:YKR014C Uniprot:P36018
Length = 234
Score = 270 (100.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 57/116 (49%), Positives = 77/116 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-----GENK---VKLQVWDTAGQERF 168
VGK+S+V R++ F TIGA+F + I + E K +K ++WDTAGQER+
Sbjct: 14 VGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERY 73
Query: 169 RSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL 223
+S+APMYYRNANAAL+V+DITQ S + WV ELK V D+ LV+ ++GNK DL
Sbjct: 74 KSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDL 129
Score = 69 (29.3 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 227 REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSD 286
R ++ EEA Y++ G + E SA +G++++F ++ + L L ++ + + R
Sbjct: 153 RAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLKKDEILSKQNRQIGGG 212
Query: 287 N 287
N
Sbjct: 213 N 213
>RGD|68323 [details] [associations]
symbol:Rab2a "RAB2A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0003924 "GTPase activity" evidence=IEA;ISO;ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISO;ISS;IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA;ISO;ISS] [GO:0032482 "Rab protein signal transduction"
evidence=IC] [GO:0033116 "endoplasmic reticulum-Golgi intermediate
compartment membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:68323 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 GO:GO:0015031 GO:GO:0043025 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 GO:GO:0032482 CTD:5862
KO:K07877 OrthoDB:EOG41G354 EMBL:J02999 IPI:IPI00202570 PIR:B39963
RefSeq:NP_113906.1 UniGene:Rn.44916 ProteinModelPortal:P05712
SMR:P05712 IntAct:P05712 STRING:P05712 PhosphoSite:P05712
World-2DPAGE:0004:P05712 PRIDE:P05712 GeneID:65158 KEGG:rno:65158
UCSC:RGD:68323 InParanoid:P05712 NextBio:614017 ArrayExpress:P05712
Genevestigator:P05712 GermOnline:ENSRNOG00000005963 Uniprot:P05712
Length = 212
Score = 314 (115.6 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F T+G F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
>TAIR|locus:2124092 [details] [associations]
symbol:RABA1d "RAB GTPase homolog A1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0032588 "trans-Golgi network
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0007264 GO:GO:0031901
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588 EMBL:AL161549
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL035526
KO:K07976 HOGENOM:HOG000233968 ProtClustDB:CLSN2685455
EMBL:BT003901 EMBL:BT004936 EMBL:AK228509 IPI:IPI00535318
PIR:T04872 RefSeq:NP_193615.1 UniGene:At.24230 HSSP:P20339
ProteinModelPortal:Q9SN35 SMR:Q9SN35 IntAct:Q9SN35 PaxDb:Q9SN35
PRIDE:Q9SN35 EnsemblPlants:AT4G18800.1 GeneID:827614
KEGG:ath:AT4G18800 TAIR:At4g18800 InParanoid:Q9SN35 OMA:AMGTRDD
PhylomeDB:Q9SN35 Genevestigator:Q9SN35 Uniprot:Q9SN35
Length = 214
Score = 314 (115.6 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 65/186 (34%), Positives = 111/186 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T +NV E +K Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++ W++EL+ + D +V+ +VGNK+DL V E+A
Sbjct: 83 YRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNITSANPR 294
++++ + ETSAL+ +E+ F V + +S++++ DS N+ S +
Sbjct: 143 SFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGE----DSGNVPSKGEK 198
Query: 295 GVVEIT 300
V+++
Sbjct: 199 IDVDVS 204
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 314 (115.6 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 60/148 (40%), Positives = 94/148 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T +NV + +K Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++TW+KEL+ + D +V+ +VGNK+DL V E+A
Sbjct: 83 YRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ + ETSAL+ +E+ F V
Sbjct: 143 SFAEKESLYFMETSALEATNVENAFAEV 170
>DICTYBASE|DDB_G0282847 [details] [associations]
symbol:rab5B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0282847 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P20339
RefSeq:XP_639358.1 ProteinModelPortal:Q54RX9 PRIDE:Q54RX9
EnsemblProtists:DDB0229394 GeneID:8623798 KEGG:ddi:DDB_G0282847
OMA:GQNINEL Uniprot:Q54RX9
Length = 214
Score = 312 (114.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 64/155 (41%), Positives = 95/155 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ GKT + R + F S TIGA+F + V +KL++WDTAGQER+RS+ PM
Sbjct: 58 MNTGKTCISSRLVRNEFGPTDS-TIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPM 116
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT+ ++F +K WV EL+++ L+L + GNK DL + REV +E
Sbjct: 117 YYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-REVQVDEV 175
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLI 268
Y +G ++ETSA Q I ++F + + LI
Sbjct: 176 NRYISELGNAIFFETSAASGQNINELFTEICRRLI 210
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 312 (114.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 58/156 (37%), Positives = 96/156 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F ++V K+KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAI 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS 271
++ G ++ETSA +++ F ++++ ++ S
Sbjct: 138 KLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKS 173
>TAIR|locus:2194095 [details] [associations]
symbol:RABA6b "RAB GTPase homolog A6B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AC034107 EMBL:AC069551 UniGene:At.22394
KO:K07976 HOGENOM:HOG000233968 EMBL:AK228658 IPI:IPI00535023
RefSeq:NP_173258.2 ProteinModelPortal:Q0WQN4 SMR:Q0WQN4
EnsemblPlants:AT1G18200.1 GeneID:838399 KEGG:ath:AT1G18200
TAIR:At1g18200 InParanoid:Q0WQN4 OMA:TRRITFK Genevestigator:Q0WQN4
Uniprot:Q0WQN4
Length = 229
Score = 312 (114.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 63/147 (42%), Positives = 93/147 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK++++ R+ F PTIG F + VG+ +K Q+WDTAGQERFR++ YY
Sbjct: 24 VGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRAITSSYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A ALL++DIT+ +F I+ W+ EL+ V+ +VGNK+DL SREV EE
Sbjct: 84 RGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVEEEEGKT 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNV 263
++S G + ETSAL++Q +E+ FL++
Sbjct: 144 LAESEGLYFLETSALENQNVEEAFLSM 170
>TAIR|locus:2052479 [details] [associations]
symbol:RAB7A "RAB GTPase homolog 7A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007019 PANTHER:PTHR24070
KO:K07976 HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071852
EMBL:BT024593 EMBL:AK229492 EMBL:AY084960 IPI:IPI00535065
IPI:IPI00891361 PIR:C84606 RefSeq:NP_001118357.1 RefSeq:NP_565521.1
UniGene:At.14268 ProteinModelPortal:Q9SJ11 SMR:Q9SJ11 PaxDb:Q9SJ11
PRIDE:Q9SJ11 ProMEX:Q9SJ11 EnsemblPlants:AT2G21880.1 GeneID:816724
KEGG:ath:AT2G21880 TAIR:At2g21880 InParanoid:Q948K7 OMA:TKELHID
PhylomeDB:Q9SJ11 ProtClustDB:CLSN2688325 Genevestigator:Q9SJ11
Uniprot:Q9SJ11
Length = 212
Score = 312 (114.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 72/183 (39%), Positives = 110/183 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ +Y+ K F+ TIGA F T ++++ E V LQ+WDTAGQERF+S+ +
Sbjct: 19 GVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQSLGAAF 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKE-LKR-NVDEP--LVLCVVGNKTDLE--SSREV 229
YR A+ +LV+D+ SF + W E LK+ N EP ++GNKTD++ +SR V
Sbjct: 79 YRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDVDGGNSRVV 138
Query: 230 NREEAFHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL--RVYDSD 286
+ + A + S G Y+ETSA +D I++ FL+V+ I LS E ++ + R D
Sbjct: 139 SNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAH--IALSNERKQSNDIYPRGQYHD 196
Query: 287 NIT 289
++T
Sbjct: 197 SVT 199
>ZFIN|ZDB-GENE-041212-69 [details] [associations]
symbol:rab25a "RAB25, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041212-69 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:57111 EMBL:BC086715 IPI:IPI00488879 RefSeq:NP_001008641.1
UniGene:Dr.81751 ProteinModelPortal:Q5PRC5 SMR:Q5PRC5 GeneID:494098
KEGG:dre:494098 InParanoid:Q5PRC5 NextBio:20865605
ArrayExpress:Q5PRC5 Uniprot:Q5PRC5
Length = 210
Score = 312 (114.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 61/148 (41%), Positives = 93/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+H TIG F T + V +K Q+WDTAG ER+R++ Y
Sbjct: 20 GVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGLERYRAITSAY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT++ ++ +++ W+KEL + D +V+ +VGNK DL + R V EEA
Sbjct: 80 YRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDLATVRTVPTEEAK 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
++ + G + ETSAL+ +E FL V
Sbjct: 140 DFADANGLLFMETSALESTNVESAFLEV 167
>UNIPROTKB|Q3B7V5 [details] [associations]
symbol:Rab2b "RCG61209, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1309117 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH474040
GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OMA:RRDTFTH OrthoDB:EOG41G354
CTD:84932 KO:K07878 EMBL:BC107443 IPI:IPI00365888
RefSeq:NP_001032734.1 UniGene:Rn.85120 SMR:Q3B7V5 IntAct:Q3B7V5
STRING:Q3B7V5 Ensembl:ENSRNOT00000060467 GeneID:305853
KEGG:rno:305853 InParanoid:Q3B7V5 NextBio:655133
Genevestigator:Q3B7V5 Uniprot:Q3B7V5
Length = 215
Score = 311 (114.5 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 60/160 (37%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ ++N +K + Q+ L
Sbjct: 136 AFAREHGLIFMETSAKTACNVEEAYINTAKEIHRKIQQGL 175
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 311 (114.5 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 61/148 (41%), Positives = 93/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T I+V + VK Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++ W+KEL+ + D +V+ VGNK DL R V+ E+A
Sbjct: 83 YRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ + ETSAL+ +E+ F V
Sbjct: 143 AFAERENTFFMETSALESMNVENAFTEV 170
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 310 (114.2 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 61/148 (41%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+ F+ TIG F T I + K+K Q+WDTAGQER+R++ Y
Sbjct: 20 GVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+V+DIT+ SF + W+KEL+ + D +V+ +VGNKTDL R V+ EEA
Sbjct: 80 YRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQ 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
++ ++ ETSA+ +E+ F V
Sbjct: 140 AFAAENNLSFIETSAMDASNVEEAFQTV 167
>SGD|S000005037 [details] [associations]
symbol:YPT53 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003924
"GTPase activity" evidence=ISS;IMP;IDA] [GO:0005770 "late endosome"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000005037 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006897
EMBL:BK006947 GO:GO:0005770 PROSITE:PS51419 EMBL:DQ115393
GO:GO:0006623 EMBL:X85811 eggNOG:COG1100 EMBL:AF458969
EMBL:AF458970 EMBL:AF458971 EMBL:AF458972 EMBL:AF458975
EMBL:AF458976 EMBL:AF458977 EMBL:AF458978 EMBL:AF458979
EMBL:AF458980 EMBL:AF458981 RefSeq:NP_014314.3 GeneID:855639
KEGG:sce:YNL085W RefSeq:NP_014306.3 GeneID:855631 KEGG:sce:YNL093W
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139
OrthoDB:EOG47WRXZ EMBL:X76175 EMBL:Z71369 EMBL:AY558420 PIR:S45168
ProteinModelPortal:P36019 SMR:P36019 DIP:DIP-2025N IntAct:P36019
MINT:MINT-384797 STRING:P36019 PaxDb:P36019 PRIDE:P36019
EnsemblFungi:YNL093W CYGD:YNL093w OMA:SIVVRFA NextBio:979842
ArrayExpress:P36019 Genevestigator:P36019 GermOnline:YNL093W
Uniprot:P36019
Length = 220
Score = 310 (114.2 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 73/194 (37%), Positives = 108/194 (55%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F PTIGA+F T +I +K ++WDTAGQERF +APMYY
Sbjct: 23 VGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF- 235
RNA AAL+VFD+T SF + WV+EL V +V+ +VGNK DL ++ + N A
Sbjct: 83 RNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMK 142
Query: 236 -----HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS 290
+ + Y+E SA + I +F + + + C Q + +S+ +D IT
Sbjct: 143 APAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKVPCPEQNTRQSST---HDR-TITD 198
Query: 291 ANPRGVVEITPLSS 304
N R +E T + S
Sbjct: 199 -NQRIDLESTTVES 211
>TAIR|locus:2124593 [details] [associations]
symbol:RABA1e "RAB GTPase homolog A1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 EMBL:AL161548 eggNOG:COG1100 EMBL:AL021710
KO:K07976 HOGENOM:HOG000233968 EMBL:BT010933 EMBL:BT011645
IPI:IPI00520128 PIR:T04539 RefSeq:NP_193578.1 UniGene:At.27918
HSSP:P35278 ProteinModelPortal:O49513 SMR:O49513 PaxDb:O49513
PRIDE:O49513 EnsemblPlants:AT4G18430.1 GeneID:827574
KEGG:ath:AT4G18430 TAIR:At4g18430 InParanoid:O49513 OMA:AHEDSPG
PhylomeDB:O49513 ProtClustDB:CLSN2915845 Genevestigator:O49513
Uniprot:O49513
Length = 217
Score = 310 (114.2 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 63/148 (42%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T ++V E +K Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT++ +F ++ W+KEL+ + D +V+ +VGNK DL R V EEA
Sbjct: 83 YRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAVPTEEAR 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+S+ + ETSAL +E F +V
Sbjct: 143 SFSERENMFFMETSALDATNVEQAFTHV 170
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 309 (113.8 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 61/179 (34%), Positives = 103/179 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F +++ K+KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAD 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-------QESLHTSSLRVYDSDN 287
++ G ++ETSA +++ F ++++ ++ S H++ L+ D N
Sbjct: 138 KLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLGNSNKPHSTDLKTCDKKN 196
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 309 (113.8 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 61/179 (34%), Positives = 103/179 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F +++ K+KLQVWDTAGQERF+++ Y
Sbjct: 57 GVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 116
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 117 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAD 176
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-------QESLHTSSLRVYDSDN 287
++ G ++ETSA +++ F ++++ ++ S H++ L+ D N
Sbjct: 177 KLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLGNSNKPHSTDLKTCDKKN 235
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 57/156 (36%), Positives = 96/156 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F +++ K+KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAD 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS 271
++ G ++ETSA +++ F ++++ ++ S
Sbjct: 138 KLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 57/156 (36%), Positives = 96/156 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F +++ K+KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAD 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS 271
++ G ++ETSA +++ F ++++ ++ S
Sbjct: 138 KLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 61/148 (41%), Positives = 94/148 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FS TIG F T I+V E VK Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T++ +F ++ W+KEL+ + + +V+ +VGNK DL R V+ E+A
Sbjct: 83 YRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ + ETSAL+ +E+ F V
Sbjct: 143 AFAERENTFFMETSALEALNVENAFTEV 170
>WB|WBGene00004271 [details] [associations]
symbol:rab-7 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0001555 "oocyte growth" evidence=IMP] [GO:0031090
"organelle membrane" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0090387 "phagolysosome
assembly involved in apoptotic cell clearance" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0007264
GO:GO:0030670 GO:GO:0002119 GO:GO:0015031 GO:GO:0008219
GO:GO:0018996 GO:GO:0003924 GO:GO:0010171 GO:GO:0040011
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0019915
GO:GO:0043652 eggNOG:COG1100 GO:GO:0001555 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH HSSP:P32939
EMBL:Z66516 GO:GO:0090387 PIR:T26119 RefSeq:NP_496549.1
ProteinModelPortal:Q23146 SMR:Q23146 IntAct:Q23146 STRING:Q23146
PaxDb:Q23146 EnsemblMetazoa:W03C9.3.1 EnsemblMetazoa:W03C9.3.2
EnsemblMetazoa:W03C9.3.3 GeneID:174834 KEGG:cel:CELE_W03C9.3
UCSC:W03C9.3.1 CTD:174834 WormBase:W03C9.3 InParanoid:Q23146
NextBio:885704 Uniprot:Q23146
Length = 209
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 72/185 (38%), Positives = 107/185 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ +Y+ + FS+ TIGA F T +N+ + V LQ+WDTAGQERF+S+ +
Sbjct: 19 GVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAF 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKEL-----KRNVDE-PLVLCVVGNKTDLESSREV 229
YR A+ +L FD+T SF ++ +W E R+ D P VL +GNK DLES R V
Sbjct: 79 YRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL--LGNKVDLESQRAV 136
Query: 230 NREEAFHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
+ + A + ++ G YYE SA + +E FL +++ L++ES T+ + D I
Sbjct: 137 SSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARD--ALARESQETNDFPEFP-DQI 193
Query: 289 TSANP 293
NP
Sbjct: 194 R-LNP 197
>WB|WBGene00006833 [details] [associations]
symbol:unc-108 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0043277 "apoptotic cell clearance" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0001845
"phagolysosome assembly" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0090390 "phagosome acidification
involved in apoptotic cell clearance" evidence=IGI;IMP] [GO:0090387
"phagolysosome assembly involved in apoptotic cell clearance"
evidence=IGI;IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0040007
GO:GO:0007264 GO:GO:0045335 GO:GO:0002119 GO:GO:0015031
GO:GO:0030424 GO:GO:0003924 GO:GO:0040011 GO:GO:0005764
GO:GO:0005802 GO:GO:0005769 GO:GO:0043652 eggNOG:COG1100
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
OMA:KIGPQHS KO:K07878 EMBL:FO080750 PIR:T25796 RefSeq:NP_491233.1
ProteinModelPortal:O01577 SMR:O01577 IntAct:O01577 PaxDb:O01577
EnsemblMetazoa:F53F10.4.1 EnsemblMetazoa:F53F10.4.2 GeneID:171956
KEGG:cel:CELE_F53F10.4 UCSC:F53F10.4 CTD:171956 WormBase:F53F10.4
InParanoid:O01577 NextBio:873411 ArrayExpress:O01577 GO:GO:0090387
GO:GO:0090390 Uniprot:O01577
Length = 214
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 59/160 (36%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F + + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ + +V+ ++GNK+DLE+ REV REE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F++ +K + QE +
Sbjct: 136 AFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGV 175
>UNIPROTKB|O01577 [details] [associations]
symbol:unc-108 "Protein UNC-108" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0040007
GO:GO:0007264 GO:GO:0045335 GO:GO:0002119 GO:GO:0015031
GO:GO:0030424 GO:GO:0003924 GO:GO:0040011 GO:GO:0005764
GO:GO:0005802 GO:GO:0005769 GO:GO:0043652 eggNOG:COG1100
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
OMA:KIGPQHS KO:K07878 EMBL:FO080750 PIR:T25796 RefSeq:NP_491233.1
ProteinModelPortal:O01577 SMR:O01577 IntAct:O01577 PaxDb:O01577
EnsemblMetazoa:F53F10.4.1 EnsemblMetazoa:F53F10.4.2 GeneID:171956
KEGG:cel:CELE_F53F10.4 UCSC:F53F10.4 CTD:171956 WormBase:F53F10.4
InParanoid:O01577 NextBio:873411 ArrayExpress:O01577 GO:GO:0090387
GO:GO:0090390 Uniprot:O01577
Length = 214
Score = 308 (113.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 59/160 (36%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F + + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ + +V+ ++GNK+DLE+ REV REE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F++ +K + QE +
Sbjct: 136 AFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGV 175
>ASPGD|ASPL0000044057 [details] [associations]
symbol:AN2474 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:BN001307 eggNOG:COG1100 EMBL:AACD01000041
HOGENOM:HOG000233968 RefSeq:XP_660078.1 ProteinModelPortal:Q5BAF6
EnsemblFungi:CADANIAT00009194 GeneID:2874893 KEGG:ani:AN2474.2
OMA:GWDCCHE OrthoDB:EOG4XH38V Uniprot:Q5BAF6
Length = 307
Score = 284 (105.0 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 60/126 (47%), Positives = 83/126 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKI--NVGENKVKLQVWDTAGQERFRSMA 172
GVGKTS+V RY+ F+ + T+GASF T ++ + + V+LQ+WDTAGQERFRS++
Sbjct: 16 GVGKTSLVQRYVKNSFNASATTSTVGASFVTKRVLDSASDTLVRLQIWDTAGQERFRSIS 75
Query: 173 PMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV---DEPLVLCVVGNKTDLESSREV 229
+YYR ANA LL +DIT SF + W+ ELKRN+ DEP+V+ VVG K+D+ +
Sbjct: 76 RLYYRGANACLLCYDITDESSFNEMTGWLHELKRNLTSDDEPIVIHVVGTKSDIVADDPG 135
Query: 230 NREEAF 235
R F
Sbjct: 136 RRRVPF 141
Score = 47 (21.6 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 231 REEAFHYSKSIG-GTYYETSALQDQGIEDVFLNVSKGLI 268
R F + + IG +E SA +G+E+VF +++ L+
Sbjct: 190 RSSGF-WGQDIGWDCCHEISAKDGEGVEEVFRVIARKLV 227
>RGD|1306489 [details] [associations]
symbol:Rab5b "RAB5B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=ISO] [GO:0030139 "endocytic vesicle"
evidence=ISO] [GO:0030742 "GTP-dependent protein binding"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1306489 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 IPI:IPI00564419 PRIDE:D3ZMT3
Ensembl:ENSRNOT00000051269 UCSC:RGD:1306489 ArrayExpress:D3ZMT3
Uniprot:D3ZMT3
Length = 167
Score = 307 (113.1 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 56/116 (48%), Positives = 79/116 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE 232
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V E
Sbjct: 91 RGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYE 146
>TAIR|locus:2027874 [details] [associations]
symbol:RABA6a "RAB GTPase homolog A6A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0044036 "cell wall macromolecule metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC012679 UniGene:At.17986
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY084805
IPI:IPI00532426 PIR:D96763 RefSeq:NP_177505.1 UniGene:At.34968
ProteinModelPortal:Q9C9U7 SMR:Q9C9U7 PaxDb:Q9C9U7 PRIDE:Q9C9U7
EnsemblPlants:AT1G73640.1 GeneID:843698 KEGG:ath:AT1G73640
TAIR:At1g73640 InParanoid:Q9C9U7 OMA:GRIHEVV PhylomeDB:Q9C9U7
ProtClustDB:CLSN2679879 Genevestigator:Q9C9U7 Uniprot:Q9C9U7
Length = 233
Score = 307 (113.1 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 62/145 (42%), Positives = 92/145 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK++++ R+ F PTIG F ++VG+ +K Q+WDTAGQERFR++ YY
Sbjct: 24 VGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRAITSSYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A ALL++DIT+ +F IK W+ EL+ + V+ +VGNK+DL SREV +E
Sbjct: 84 RGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQSREVEEDEGKT 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFL 261
++S G + ETSAL++ +E+ FL
Sbjct: 144 LAESEGLYFLETSALENVNVEEAFL 168
>ZFIN|ZDB-GENE-030826-20 [details] [associations]
symbol:rab14 "RAB14, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-030826-20 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:51552
GeneTree:ENSGT00690000101805 KO:K07881 OrthoDB:EOG4MGS89
EMBL:CU914564 EMBL:CU856237 EMBL:CU861659 EMBL:BC045374
EMBL:BC153493 IPI:IPI00493186 RefSeq:NP_958903.1
RefSeq:XP_002662217.1 UniGene:Dr.7872 SMR:Q7ZVX4 STRING:Q7ZVX4
Ensembl:ENSDART00000066568 Ensembl:ENSDART00000111072
Ensembl:ENSDART00000124616 GeneID:100332590 GeneID:373104
KEGG:dre:100332590 KEGG:dre:373104 InParanoid:Q7ZVX4 OMA:ANDQTAS
NextBio:20813371 Uniprot:Q7ZVX4
Length = 215
Score = 307 (113.1 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/152 (41%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V KVKLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>DICTYBASE|DDB_G0281337 [details] [associations]
symbol:rab14 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005764 "lysosome" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000331 "contractile
vacuole" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0281337
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
GO:GO:0016020 GenomeReviews:CM000152_GR GO:GO:0015031 GO:GO:0005768
EMBL:AAFI02000040 GO:GO:0005764 GO:GO:0000331 PROSITE:PS51419
eggNOG:COG1100 KO:K07881 OMA:GVQHKPA EMBL:U02927 RefSeq:XP_640740.1
ProteinModelPortal:P36410 SMR:P36410 MINT:MINT-6947926 PRIDE:P36410
EnsemblProtists:DDB0214821 GeneID:8623016 KEGG:ddi:DDB_G0281337
Uniprot:P36410
Length = 206
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/185 (36%), Positives = 108/185 (58%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ F TIG F T ++V K+KLQ+WDTAGQERFR++
Sbjct: 17 MGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRS 76
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A ALLV+DIT+ ++ + TW+ + RN+ P V+ ++GNK DLE R+V EE
Sbjct: 77 YYRGAAGALLVYDITRRITYNHLTTWLTDA-RNLTNPNTVIMLIGNKKDLEGQRDVTYEE 135
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
A ++K G + E+SA + +E+ FL +K LI +S+ ++ + IT P
Sbjct: 136 ASAFAKQNGLIFVESSAKTGENVEEAFLRTAK-LIF---QSVQEGNVDLIPDGGITKNPP 191
Query: 294 RGVVE 298
+ + +
Sbjct: 192 QTITD 196
>UNIPROTKB|Q5ZKU5 [details] [associations]
symbol:RAB14 "Ras-related protein Rab-14" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0032456 "endocytic recycling" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0009790 "embryo development"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0006895 "Golgi to endosome
transport" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008543 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0015031 GO:GO:0009790
PROSITE:PS51419 GO:GO:0006895 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AJ719989
IPI:IPI00582881 RefSeq:NP_001012814.1 UniGene:Gga.16164 HSSP:P61106
ProteinModelPortal:Q5ZKU5 SMR:Q5ZKU5 PRIDE:Q5ZKU5
Ensembl:ENSGALT00000002236 GeneID:417119 KEGG:gga:417119 CTD:51552
GeneTree:ENSGT00690000101805 InParanoid:Q5ZKU5 KO:K07881
OMA:GVQHKPA OrthoDB:EOG4MGS89 NextBio:20820473 Uniprot:Q5ZKU5
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|Q3ZBG1 [details] [associations]
symbol:RAB14 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0032456
"endocytic recycling" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0009790 "embryo development" evidence=IEA]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=IEA] [GO:0006895 "Golgi to endosome transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008543
GO:GO:0007264 GO:GO:0015031 GO:GO:0005622 GO:GO:0009790
GO:GO:0006895 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:51552 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA OrthoDB:EOG4MGS89 EMBL:DAAA02024795
EMBL:BC103315 IPI:IPI00718291 RefSeq:NP_001124226.1
UniGene:Bt.39706 SMR:Q3ZBG1 Ensembl:ENSBTAT00000023671
GeneID:539180 KEGG:bta:539180 InParanoid:Q3ZBG1 NextBio:20877830
Uniprot:Q3ZBG1
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|E2R0K4 [details] [associations]
symbol:RAB14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0032456 "endocytic recycling" evidence=IEA] [GO:0019003 "GDP
binding" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=IEA] [GO:0006895 "Golgi to endosome
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008543 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 GO:GO:0009790 GO:GO:0006895 GO:GO:0019003 CTD:51552
GeneTree:ENSGT00690000101805 KO:K07881 OMA:GVQHKPA
EMBL:AAEX03008182 RefSeq:XP_532048.2 ProteinModelPortal:E2R0K4
SMR:E2R0K4 PRIDE:E2R0K4 Ensembl:ENSCAFT00000005849 GeneID:474818
KEGG:cfa:474818 NextBio:20850763 Uniprot:E2R0K4
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|J9NWA7 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 EMBL:AAEX03015816
Ensembl:ENSCAFT00000045662 Uniprot:J9NWA7
Length = 214
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/162 (38%), Positives = 100/162 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNK--TDLESSREVNREE 233
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK +DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKRFSDLESRREVKKEE 135
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + QE +
Sbjct: 136 GEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 177
>UNIPROTKB|P61106 [details] [associations]
symbol:RAB14 "Ras-related protein Rab-14" species:9606
"Homo sapiens" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0005770 "late endosome" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0042175 "nuclear outer
membrane-endoplasmic reticulum membrane network" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005791 "rough
endoplasmic reticulum" evidence=ISS] [GO:0030140 "trans-Golgi
network transport vesicle" evidence=ISS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0046907
"intracellular transport" evidence=NAS] [GO:0006895 "Golgi to
endosome transport" evidence=ISS;TAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=NAS] [GO:0003924 "GTPase
activity" evidence=IDA;NAS] [GO:0019003 "GDP binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009790 "embryo development"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0032456 "endocytic recycling" evidence=IDA]
[GO:0055037 "recycling endosome" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA;NAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0048471 GO:GO:0008543 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0015031 GO:GO:0016324
GO:GO:0005791 GO:GO:0003924 EMBL:CH471090 GO:GO:0005795
GO:GO:0032880 GO:GO:0005764 GO:GO:0005770 GO:GO:0055037
GO:GO:0009790 PROSITE:PS51419 GO:GO:0030140 GO:GO:0005769
GO:GO:0032456 GO:GO:0007589 GO:GO:0007269 GO:GO:0006895
GO:GO:0042175 eggNOG:COG1100 GO:GO:0019003 GO:GO:0042599
GO:GO:0045176 HOVERGEN:HBG009351 EMBL:AL137068 CTD:51552 KO:K07881
OMA:GVQHKPA OrthoDB:EOG4MGS89 EMBL:AF152463 EMBL:AF203689
EMBL:AY553875 EMBL:AF112206 EMBL:AL162081 EMBL:AK023524
EMBL:AK090889 EMBL:AF498949 EMBL:CR457394 EMBL:BC006081
IPI:IPI00291928 RefSeq:NP_057406.2 UniGene:Hs.371563 PDB:1Z0F
PDB:4DRZ PDBsum:1Z0F PDBsum:4DRZ ProteinModelPortal:P61106
SMR:P61106 IntAct:P61106 MINT:MINT-2882831 STRING:P61106
PhosphoSite:P61106 DMDM:85700392 PaxDb:P61106 PeptideAtlas:P61106
PRIDE:P61106 DNASU:51552 Ensembl:ENST00000373840
Ensembl:ENST00000451303 GeneID:51552 KEGG:hsa:51552 UCSC:uc004blc.3
GeneCards:GC09M123940 HGNC:HGNC:16524 HPA:HPA026419 MIM:612673
neXtProt:NX_P61106 PharmGKB:PA34104 InParanoid:P61106 ChiTaRS:RAB14
EvolutionaryTrace:P61106 GenomeRNAi:51552 NextBio:55334 Bgee:P61106
CleanEx:HS_RAB14 Genevestigator:P61106 GermOnline:ENSG00000119396
Uniprot:P61106
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|F2Z5N8 [details] [associations]
symbol:RAB14 "Ras-related protein Rab-14" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0032456
"endocytic recycling" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0009790 "embryo development" evidence=IEA]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=IEA] [GO:0006895 "Golgi to endosome transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008543
GO:GO:0007264 GO:GO:0015031 GO:GO:0005622 GO:GO:0009790
GO:GO:0006895 GO:GO:0019003 GeneTree:ENSGT00690000101805
OMA:GVQHKPA EMBL:CU467561 ProteinModelPortal:F2Z5N8 SMR:F2Z5N8
PRIDE:F2Z5N8 Ensembl:ENSSSCT00000006064 Uniprot:F2Z5N8
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|Q52NJ6 [details] [associations]
symbol:RAB14 "Ras-related protein Rab-14" species:9823 "Sus
scrofa" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032880 "regulation of
protein localization" evidence=ISS] [GO:0032456 "endocytic
recycling" evidence=ISS] [GO:0006895 "Golgi to endosome transport"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=ISS]
[GO:0009790 "embryo development" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008543 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0015031 GO:GO:0003924
GO:GO:0032880 GO:GO:0055037 GO:GO:0009790 PROSITE:PS51419
GO:GO:0032456 GO:GO:0006895 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P61106 CTD:51552
KO:K07881 OrthoDB:EOG4MGS89 EMBL:AY996809 RefSeq:NP_001026953.1
UniGene:Ssc.94409 ProteinModelPortal:Q52NJ6 SMR:Q52NJ6
STRING:Q52NJ6 PRIDE:Q52NJ6 GeneID:595112 KEGG:ssc:595112
Uniprot:Q52NJ6
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>UNIPROTKB|Q5R8Z8 [details] [associations]
symbol:RAB14 "Ras-related protein Rab-14" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006895 "Golgi to endosome transport"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0032456
"endocytic recycling" evidence=ISS] [GO:0032880 "regulation of
protein localization" evidence=ISS] [GO:0045335 "phagocytic
vesicle" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008543 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0015031 GO:GO:0003924
GO:GO:0032880 GO:GO:0055037 GO:GO:0009790 PROSITE:PS51419
GO:GO:0032456 GO:GO:0006895 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P61106 CTD:51552 KO:K07881 EMBL:CR859599 RefSeq:NP_001126022.1
UniGene:Pab.18962 UniGene:Pab.3284 ProteinModelPortal:Q5R8Z8
SMR:Q5R8Z8 PRIDE:Q5R8Z8 GeneID:100461766 KEGG:pon:100461766
Uniprot:Q5R8Z8
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>MGI|MGI:1915615 [details] [associations]
symbol:Rab14 "RAB14, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001948 "glycoprotein binding" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005764 "lysosome" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005770 "late endosome" evidence=ISO] [GO:0005791 "rough
endoplasmic reticulum" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006895 "Golgi to endosome transport"
evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007589 "body fluid secretion"
evidence=ISO] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0030133 "transport vesicle" evidence=ISO] [GO:0030140
"trans-Golgi network transport vesicle" evidence=ISO] [GO:0032456
"endocytic recycling" evidence=ISO] [GO:0032880 "regulation of
protein localization" evidence=ISO] [GO:0042175 "nuclear outer
membrane-endoplasmic reticulum membrane network" evidence=ISO]
[GO:0045176 "apical protein localization" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] [GO:0097208 "alveolar lamellar body" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1915615
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0048471
GO:GO:0008543 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0015031 GO:GO:0016324 GO:GO:0005791
GO:GO:0003924 GO:GO:0005795 GO:GO:0032880 GO:GO:0005764
GO:GO:0005770 GO:GO:0055037 GO:GO:0009790 PROSITE:PS51419
GO:GO:0030140 GO:GO:0032456 GO:GO:0007589 GO:GO:0006895
GO:GO:0042175 eggNOG:COG1100 GO:GO:0019003 GO:GO:0042599
GO:GO:0045176 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:51552
GeneTree:ENSGT00690000101805 KO:K07881 OMA:GVQHKPA
OrthoDB:EOG4MGS89 ChiTaRS:RAB14 EMBL:AK002704 EMBL:BC009085
EMBL:BC025139 EMBL:BC056648 IPI:IPI00126042 RefSeq:NP_080973.1
UniGene:Mm.198264 ProteinModelPortal:Q91V41 SMR:Q91V41
IntAct:Q91V41 STRING:Q91V41 PhosphoSite:Q91V41 UCD-2DPAGE:Q91V41
PaxDb:Q91V41 PRIDE:Q91V41 Ensembl:ENSMUST00000028238 GeneID:68365
KEGG:mmu:68365 InParanoid:Q91V41 NextBio:327068 Bgee:Q91V41
CleanEx:MM_RAB14 Genevestigator:Q91V41
GermOnline:ENSMUSG00000026878 Uniprot:Q91V41
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>RGD|1307095 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1307095 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005811 GO:GO:0015031
GO:GO:0030100 GO:GO:0030139 GO:GO:0007032 OrthoDB:EOG4Z0B6M
OMA:VDLQESN IPI:IPI00564330 Ensembl:ENSRNOT00000040235
UCSC:RGD:1307095 ArrayExpress:D4ABV4 Uniprot:D4ABV4
Length = 232
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/142 (44%), Positives = 87/142 (61%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V E F
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAV---EFFP 148
Query: 237 YSKSIGGTYYETSALQDQGIED 258
T + TS L+ Q D
Sbjct: 149 CHLPSPPTLFLTSELEAQAYAD 170
>RGD|620881 [details] [associations]
symbol:Rab14 "RAB14, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0001948 "glycoprotein binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=ISO;ISS;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding"
evidence=IEA;ISO;ISS] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005764 "lysosome" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005770 "late endosome" evidence=IDA] [GO:0005791
"rough endoplasmic reticulum" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=ISO;ISS;NAS] [GO:0006895 "Golgi to
endosome transport" evidence=IEA;ISO;ISS;TAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA;NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0007589 "body fluid
secretion" evidence=IMP] [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=IEA;ISO;ISS] [GO:0009790
"embryo development" evidence=IEA;ISO;ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IEA;ISO;ISS] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030140 "trans-Golgi network
transport vesicle" evidence=IDA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0032456 "endocytic recycling"
evidence=IEA;ISO;ISS] [GO:0032880 "regulation of protein
localization" evidence=IEA;ISO;IDA;IMP] [GO:0042175 "nuclear outer
membrane-endoplasmic reticulum membrane network" evidence=IDA]
[GO:0045176 "apical protein localization" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0046907 "intracellular
transport" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IEA;ISO;ISS] [GO:0097208 "alveolar lamellar body"
evidence=IDA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620881 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0048471 GO:GO:0008543 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0015031 GO:GO:0016324
GO:GO:0005791 GO:GO:0003924 GO:GO:0005795 GO:GO:0032880
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0055037
GO:GO:0009790 PROSITE:PS51419 GO:GO:0030140 GO:GO:0005769
GO:GO:0032456 GO:GO:0007589 GO:GO:0007269 GO:GO:0006895
GO:GO:0042175 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045176
HOVERGEN:HBG009351 GO:GO:0001948 HOGENOM:HOG000233968 CTD:51552
KO:K07881 OrthoDB:EOG4MGS89 EMBL:M83680 IPI:IPI00196794 PIR:E42148
RefSeq:NP_446041.1 UniGene:Rn.6008 ProteinModelPortal:P61107
SMR:P61107 IntAct:P61107 STRING:P61107 PhosphoSite:P61107
PRIDE:P61107 GeneID:94197 KEGG:rno:94197 UCSC:RGD:620881
InParanoid:P61107 NextBio:617858 ArrayExpress:P61107
Genevestigator:P61107 GermOnline:ENSRNOG00000018901 Uniprot:P61107
Length = 215
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 306 (112.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/161 (39%), Positives = 99/161 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F TIG F T + V VK Q+WDTAGQER+R++ Y
Sbjct: 22 GVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T+ +F + W+KEL+ + D +V+ ++GNKTDL+ R V E+A
Sbjct: 82 YRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQ 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV-SKGLICLSQESL 275
Y++ G ++ ETSAL+ +E F + S+ +S++S+
Sbjct: 142 SYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI 182
>DICTYBASE|DDB_G0268760 [details] [associations]
symbol:rabQ "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0268760 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000150_GR GO:GO:0015031 EMBL:AAFI02000004
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P61106
RefSeq:XP_646937.1 ProteinModelPortal:Q55ET3 PRIDE:Q55ET3
EnsemblProtists:DDB0229365 GeneID:8616625 KEGG:ddi:DDB_G0268760
OMA:DTTIGVE Uniprot:Q55ET3
Length = 204
Score = 305 (112.4 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 61/161 (37%), Positives = 97/161 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+++++ K FS + TIG F T I + +K+KL++WDTAGQE FRS+ YY
Sbjct: 16 VGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYY 75
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A+ ALL +DIT+ SF + W+ E+++ +V+ ++GNK D + R + EE
Sbjct: 76 RGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAK 135
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHT 277
+K ++ETSA + +E VF VSK ++ L ++ T
Sbjct: 136 NAKENDILFFETSAKDYESVESVFDGVSKKVLSLIKQGTLT 176
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 305 (112.4 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 59/151 (39%), Positives = 93/151 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
+++ ++ ETSAL +E+ F N+ G
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTG 171
>TAIR|locus:2082672 [details] [associations]
symbol:ARA6 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0015031 "protein transport" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0010009 "external side of endosome membrane" evidence=IDA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005768 "endosome" evidence=IDA] [GO:0006623 "protein targeting
to vacuole" evidence=RCA] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0016197 "endosomal transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0031901 EMBL:AL049655
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 PROSITE:PS51419
GO:GO:0045022 GO:GO:0005769 eggNOG:COG1100 HSSP:P01112
GO:GO:0010009 KO:K07976 HOGENOM:HOG000233968 EMBL:AB007766
EMBL:BT002860 EMBL:BT004392 EMBL:AK316975 IPI:IPI00525135
IPI:IPI00846477 PIR:T06736 RefSeq:NP_001078287.1 RefSeq:NP_567008.1
UniGene:At.3115 ProteinModelPortal:Q9CB01 SMR:Q9CB01 IntAct:Q9CB01
STRING:Q9CB01 PaxDb:Q9CB01 PRIDE:Q9CB01 EnsemblPlants:AT3G54840.1
GeneID:824649 KEGG:ath:AT3G54840 TAIR:At3g54840 InParanoid:Q9CB01
OMA:ADLHEKR PhylomeDB:Q9CB01 ProtClustDB:CLSN2689166
Genevestigator:Q9CB01 Uniprot:Q9CB01
Length = 202
Score = 305 (112.4 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 61/153 (39%), Positives = 93/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
GVGK+ +V+R++ F T+GASF + I + ++ VK ++WDTAGQER+ ++AP+
Sbjct: 43 GVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPL 102
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A A++V+DIT SF + WVKEL+++ +V+ +VGNK DL REV E+
Sbjct: 103 YYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDG 162
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ G + ETSA I +F + K L
Sbjct: 163 MELAEKNGMFFIETSAKTADNINQLFEEIGKRL 195
>UNIPROTKB|F1PNL2 [details] [associations]
symbol:RAB17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:64284 KO:K07909
OMA:KLLFMET GeneTree:ENSGT00640000091139 EMBL:AAEX03014484
EMBL:AAEX03014485 RefSeq:XP_848805.1 Ensembl:ENSCAFT00000019472
GeneID:607120 KEGG:cfa:607120 Uniprot:F1PNL2
Length = 213
Score = 304 (112.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 61/153 (39%), Positives = 99/153 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT + +G +K ++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVELGAVSLKFEIWDTAGQEKYHSICHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+++L+R V +V+ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFCKAQQWLQDLERQVPAGEVVVMLVGNKTDLGEQREVTFQEGK 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++S + E SA + + +VF +++ L+
Sbjct: 149 EFAESKRLLFMEASAKLNHQVTEVFSALARELL 181
>MGI|MGI:105069 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001671 "ATPase activator activity" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IDA] [GO:0016020
"membrane" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0019905 "syntaxin binding" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0032482 "Rab protein
signal transduction" evidence=ISO] [GO:0032593 "insulin-responsive
compartment" evidence=ISO] [GO:0032781 "positive regulation of
ATPase activity" evidence=ISO] [GO:0035255 "ionotropic glutamate
receptor binding" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0051117 "ATPase
binding" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] Reactome:REACT_88307 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:105069 GO:GO:0005525 TIGRFAMs:TIGR00231
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0016020 GO:GO:0008565
GO:GO:0005768 GO:GO:0003924 GO:GO:0030100 PROSITE:PS51419
EMBL:CH466525 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AC147266 OrthoDB:EOG4WM4VM EMBL:D86563 EMBL:AB232591
EMBL:AK136566 EMBL:AK161877 IPI:IPI00113127 UniGene:Mm.9221
ProteinModelPortal:P56371 SMR:P56371 MINT:MINT-255793 STRING:P56371
PhosphoSite:P56371 PaxDb:P56371 PRIDE:P56371
Ensembl:ENSMUST00000117702 Ensembl:ENSMUST00000118535
InParanoid:P56371 CleanEx:MM_RAB4A Genevestigator:P56371
GermOnline:ENSMUSG00000019478 Uniprot:P56371
Length = 218
Score = 304 (112.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 61/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 23 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +VL + GNK DL++ REV EA
Sbjct: 83 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 143 RFAQENELMFLETSALTGENVEEAFMQCARKIL 175
>WB|WBGene00008671 [details] [associations]
symbol:F11A5.3 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0019915 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
EMBL:Z92830 PIR:T20749 RefSeq:NP_507083.1 UniGene:Cel.4154
ProteinModelPortal:O17788 SMR:O17788 EnsemblMetazoa:F11A5.3
GeneID:184330 KEGG:cel:CELE_F11A5.3 UCSC:F11A5.3 CTD:184330
WormBase:F11A5.3 InParanoid:O17788 NextBio:924368 Uniprot:O17788
Length = 201
Score = 304 (112.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 58/149 (38%), Positives = 98/149 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+ ++F + T+G F + + + KV+L+VWDT GQE FRS+ Y
Sbjct: 16 GVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA ALLV+DIT SF ++ W+ +L+++ +V+ ++GNK+DL++ R+V EE
Sbjct: 76 YRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
++K G T+ ETSA ++ +E F+N +
Sbjct: 136 AFAKKNGLTFMETSAKANKHVEKAFVNTA 164
>FB|FBgn0015790 [details] [associations]
symbol:Rab11 "Rab11" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0048477
"oogenesis" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0007317 "regulation of pole plasm oskar mRNA
localization" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0006897 "endocytosis"
evidence=IDA;IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IMP]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0030140 "trans-Golgi
network transport vesicle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0001745 "compound eye
morphogenesis" evidence=IMP] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0048749 "compound eye development"
evidence=IGI] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0030723 "ovarian fusome organization" evidence=IMP] [GO:0034334
"adherens junction maintenance" evidence=IMP] [GO:0045169 "fusome"
evidence=IDA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0060187 "cell
pole" evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IMP]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0007112 "male
meiosis cytokinesis" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0000916 "actomyosin
contractile ring contraction" evidence=IMP] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0045478 "fusome organization" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046664 "dorsal closure, amnioserosa morphology change"
evidence=IMP] [GO:0007394 "dorsal closure, elongation of leading
edge cells" evidence=IMP] [GO:2000039 "regulation of trichome
morphogenesis" evidence=IGI;IMP] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005635
GO:GO:0048471 GO:GO:0008103 GO:GO:0007264 GO:GO:0005811
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0006897
GO:GO:0043195 GO:GO:0022416 GO:GO:0031532 GO:GO:0007298
GO:GO:0000916 GO:GO:0030140 GO:GO:0016360 GO:GO:0032154
GO:GO:0019730 GO:GO:0007112 GO:GO:0030718 GO:GO:0030723
GO:GO:0007349 GO:GO:0045169 GO:GO:0048137 GO:GO:0050807
GO:GO:0042078 GO:GO:0042052 GO:GO:0007317 GO:GO:0046664
GO:GO:2000039 GO:GO:0007394 GO:GO:0034334 GO:GO:0070732
GO:GO:0048210 GO:GO:0060187 HSSP:P07560
GeneTree:ENSGT00690000101664 KO:K07904 OMA:ERSAHDE EMBL:AY070528
EMBL:AY113404 EMBL:D84315 EMBL:AB035354 RefSeq:NP_477170.1
RefSeq:NP_599137.1 UniGene:Dm.3038 SMR:O18335 IntAct:O18335
MINT:MINT-758893 STRING:O18335 EnsemblMetazoa:FBtr0084010
EnsemblMetazoa:FBtr0084011 GeneID:42501 KEGG:dme:Dmel_CG5771
UCSC:CG5771-RA CTD:42501 FlyBase:FBgn0015790 InParanoid:O18335
OrthoDB:EOG4DNCMD ChiTaRS:Rab11 GenomeRNAi:42501 NextBio:829121
Uniprot:O18335
Length = 214
Score = 303 (111.7 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 58/148 (39%), Positives = 93/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W++EL+ + D+ +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F N+
Sbjct: 141 LFAERNGLSFIETSALDSTNVETAFQNI 168
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 303 (111.7 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 60/158 (37%), Positives = 94/158 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F+ TIG F I V KVKLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT S+ I+ W+K +K N + ++GNK D+E+ R+V++E
Sbjct: 78 YRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKETGE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
+K G ++ETSA +E+ F ++++ ++ S +
Sbjct: 138 KLAKEHGIRFFETSAKSSINVEESFTSLARDILLKSNK 175
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>POMBASE|SPAC4C5.02c [details] [associations]
symbol:ryh1 "GTPase Ryh1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO] [GO:0071470 "cellular response to osmotic stress"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC4C5.02c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003924 GO:GO:0010008 GO:GO:0071470 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0042147 KO:K07976 HOGENOM:HOG000233968
EMBL:X52475 PIR:S12789 RefSeq:NP_593249.1 ProteinModelPortal:P17608
SMR:P17608 STRING:P17608 PRIDE:P17608 EnsemblFungi:SPAC4C5.02c.1
GeneID:2543529 KEGG:spo:SPAC4C5.02c OMA:PNENESS OrthoDB:EOG44BFBD
NextBio:20804539 Uniprot:P17608
Length = 201
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/168 (34%), Positives = 104/168 (61%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS++ R++ F + TIG F + + + + V+LQ+WDTAGQERFRS+ P Y
Sbjct: 22 VGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+++ A++V+DIT ++SF + W+++++ + +++ +VGNKTDL R+V +EE
Sbjct: 82 RDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEK 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
+K + + ETSA ++ +F +++ L E++ T S ++ D
Sbjct: 142 KAKELKIMHMETSAKAGHNVKLLFRKIAQMLP--GMENVETQSTQMID 187
>RGD|3529 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001671 "ATPase activator activity"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA;ISO;ISS;IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISO;ISS;IDA;TAS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005768 "endosome" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS;IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA;ISO] [GO:0015031 "protein transport"
evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0019003
"GDP binding" evidence=IEA;ISO;ISS] [GO:0019905 "syntaxin binding"
evidence=IPI] [GO:0030100 "regulation of endocytosis"
evidence=IEA;ISO] [GO:0032482 "Rab protein signal transduction"
evidence=IC;IMP] [GO:0032593 "insulin-responsive compartment"
evidence=IDA] [GO:0032781 "positive regulation of ATPase activity"
evidence=IDA] [GO:0035255 "ionotropic glutamate receptor binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0051117 "ATPase binding" evidence=IDA] [GO:0055037
"recycling endosome" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:3529 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0008565 GO:GO:0003924 GO:GO:0055037 GO:GO:0030100
PROSITE:PS51419 GO:GO:0001671 GO:GO:0032593 GO:GO:0051117
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5867 KO:K07879 EMBL:X06890 EMBL:BC062016
IPI:IPI00325763 PIR:S01766 RefSeq:NP_037151.2 UniGene:Rn.3016
ProteinModelPortal:P05714 SMR:P05714 STRING:P05714 PRIDE:P05714
Ensembl:ENSRNOT00000023771 GeneID:25532 KEGG:rno:25532 UCSC:RGD:3529
InParanoid:P05714 NextBio:607033 ArrayExpress:P05714
Genevestigator:P05714 GermOnline:ENSRNOG00000017467 Uniprot:P05714
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 23 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 83 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 143 RFAQENELMFLETSALTGENVEEAFMQCARKIL 175
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 60/148 (40%), Positives = 93/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I+V VK Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D+ +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
Y++ ++ ETSAL +E F N+
Sbjct: 141 IYAERNQLSFIETSALDSTNVEAAFTNI 168
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 60/148 (40%), Positives = 93/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I+V VK Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D+ +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
Y++ ++ ETSAL +E F N+
Sbjct: 141 IYAERNQLSFIETSALDSTNVEAAFTNI 168
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 302 (111.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ ++ ETSAL +E+ F N+
Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNI 168
>FB|FBgn0016701 [details] [associations]
symbol:Rab4 "Rab4" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006897
"endocytosis" evidence=TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0006897 HSSP:P01112 KO:K07976
GeneTree:ENSGT00690000101805 OMA:SPNIVIL EMBL:AB035670
RefSeq:NP_523777.1 RefSeq:NP_725696.1 RefSeq:NP_995877.1
UniGene:Dm.2700 SMR:Q7KY04 STRING:Q7KY04 EnsemblMetazoa:FBtr0086829
EnsemblMetazoa:FBtr0086830 GeneID:36992 KEGG:dme:Dmel_CG4921
UCSC:CG4921-RA CTD:36992 FlyBase:FBgn0016701 InParanoid:Q7KY04
OrthoDB:EOG4V9S6N ChiTaRS:RAB4A GenomeRNAi:36992 NextBio:801393
Uniprot:Q7KY04
Length = 213
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 63/153 (41%), Positives = 90/153 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ +I F S TIG F + +NVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 18 GSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSVTRSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D T SF A+ W+ + + +V+ +VGNK DLE +R+V EA
Sbjct: 78 YRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFLEAS 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSA + +E+ FL SK ++
Sbjct: 138 TFAQENELIFLETSAKTGENVEEAFLKCSKTIL 170
>UNIPROTKB|E1C8H0 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AADN02035654 EMBL:AADN02035655 EMBL:AADN02035652
EMBL:AADN02035653 IPI:IPI00591536 Ensembl:ENSGALT00000018060
Uniprot:E1C8H0
Length = 213
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 18 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 78 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 138 RFAQENELMFLETSALTGENVEEAFVQCARKIL 170
>UNIPROTKB|Q2TBH7 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00690000101805 EMBL:BC110198 IPI:IPI00843020
RefSeq:NP_001033774.1 UniGene:Bt.91385 ProteinModelPortal:Q2TBH7
SMR:Q2TBH7 STRING:Q2TBH7 PRIDE:Q2TBH7 Ensembl:ENSBTAT00000049768
GeneID:615849 KEGG:bta:615849 CTD:5867 InParanoid:Q2TBH7 KO:K07879
OrthoDB:EOG4WM4VM NextBio:20899821 Uniprot:Q2TBH7
Length = 218
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 23 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 83 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 143 RFAQENELMFLETSALTGENVEEAFVQCARKIL 175
>UNIPROTKB|E2QTP7 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AAEX03002724 Ensembl:ENSCAFT00000019425 Uniprot:E2QTP7
Length = 218
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 23 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 83 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 143 RFAQENELMFLETSALTGENVEEAFVQCARKIL 175
>UNIPROTKB|P20338 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0008565 GO:GO:0003924 EMBL:CH471098
GO:GO:0055037 GO:GO:0030100 PROSITE:PS51419 GO:GO:0001671
GO:GO:0032593 eggNOG:COG1100 GO:GO:0019003 EMBL:AL117350
HOVERGEN:HBG009351 CTD:5867 KO:K07879 OrthoDB:EOG4WM4VM EMBL:M28211
EMBL:AY585832 EMBL:AF498934 EMBL:AK313807 EMBL:AL162595
EMBL:BC002438 EMBL:BC004309 IPI:IPI00480056 PIR:E34323
RefSeq:NP_004569.2 UniGene:Hs.296169 PDB:1YU9 PDB:1Z0K PDB:2BMD
PDB:2BME PDBsum:1YU9 PDBsum:1Z0K PDBsum:2BMD PDBsum:2BME
ProteinModelPortal:P20338 SMR:P20338 DIP:DIP-372N IntAct:P20338
MINT:MINT-1376149 STRING:P20338 PhosphoSite:P20338 DMDM:29337213
PaxDb:P20338 PRIDE:P20338 DNASU:5867 Ensembl:ENST00000366690
GeneID:5867 KEGG:hsa:5867 UCSC:uc001hth.3 GeneCards:GC01P229406
HGNC:HGNC:9781 HPA:CAB004990 MIM:179511 neXtProt:NX_P20338
PharmGKB:PA34141 InParanoid:P20338 EvolutionaryTrace:P20338
GenomeRNAi:5867 NextBio:22786 Bgee:P20338 CleanEx:HS_RAB4A
Genevestigator:P20338 GermOnline:ENSG00000168118 Uniprot:P20338
Length = 218
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 23 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 83 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 143 RFAQENELMFLETSALTGENVEEAFVQCARKIL 175
>UNIPROTKB|F1RG36 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:CU469126 Ensembl:ENSSSCT00000011158 ArrayExpress:F1RG36
Uniprot:F1RG36
Length = 215
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 20 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 80 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 140 RFAQENELMFLETSALTGENVEEAFVQCARKIL 172
>RGD|1304742 [details] [associations]
symbol:Rab37 "RAB37, member of RAS oncogene family"
species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1304742 RGD:2319982 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104031
IPI:IPI00392981 Ensembl:ENSRNOT00000038103 ArrayExpress:F1M5M8
Uniprot:F1M5M8
Length = 196
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 62/153 (40%), Positives = 90/153 (58%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++V++ GK S T+G F + V +VKLQ+WDTAGQERFRS+
Sbjct: 12 GVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQERFRSVTHA 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A A LL++DIT SF I+ W+ E+ +V+ ++GNK D+ S R + E+
Sbjct: 72 YYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDG 131
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ G + ETSA +E FL ++K L
Sbjct: 132 ETLAREYGVPFMETSAKTGMNVELAFLAIAKEL 164
>RGD|2319982 [details] [associations]
symbol:LOC100364984 "rCG35079-like" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1304742 RGD:2319982 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 IPI:IPI00392981
Ensembl:ENSRNOT00000038103 ArrayExpress:F1M5M8 Uniprot:F1M5M8
Length = 196
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 62/153 (40%), Positives = 90/153 (58%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++V++ GK S T+G F + V +VKLQ+WDTAGQERFRS+
Sbjct: 12 GVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQERFRSVTHA 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A A LL++DIT SF I+ W+ E+ +V+ ++GNK D+ S R + E+
Sbjct: 72 YYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDG 131
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ G + ETSA +E FL ++K L
Sbjct: 132 ETLAREYGVPFMETSAKTGMNVELAFLAIAKEL 164
>SGD|S000001856 [details] [associations]
symbol:YPT1 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0048211
"Golgi vesicle docking" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0000149 "SNARE binding" evidence=IDA;IPI]
[GO:0035494 "SNARE complex disassembly" evidence=IMP] [GO:0005795
"Golgi stack" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0090114 "COPII-coated vesicle budding"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=IEA;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IGI;IMP]
[GO:0048194 "Golgi vesicle budding" evidence=IGI] [GO:0034498
"early endosome to Golgi transport" evidence=IMP] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0016236 "macroautophagy"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000001856 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0000139 GO:GO:0006461
GO:GO:0005789 GO:GO:0003924 GO:GO:0005795 EMBL:D50617 EMBL:BK006940
GO:GO:0005802 PROSITE:PS51419 GO:GO:0048194 GO:GO:0032456
GO:GO:0016236 eggNOG:COG1100 GO:GO:0006890 GO:GO:0032258
GO:GO:0000407 GO:GO:0034498 PDB:3CUE PDBsum:3CUE GO:GO:0000149
PDB:1UKV PDB:2BCG PDBsum:1UKV PDBsum:2BCG HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 KO:K07874 OMA:MIMASEI GO:GO:0090114
GO:GO:0035494 GO:GO:0048211 EMBL:X00209 OrthoDB:EOG49W5QK
EMBL:AY558467 PIR:S56216 RefSeq:NP_116615.1 PDB:1YZN PDBsum:1YZN
ProteinModelPortal:P01123 SMR:P01123 DIP:DIP-2019N IntAct:P01123
MINT:MINT-389361 STRING:P01123 PaxDb:P01123 PeptideAtlas:P01123
PRIDE:P01123 EnsemblFungi:YFL038C GeneID:850505 KEGG:sce:YFL038C
CYGD:YFL038c EvolutionaryTrace:P01123 NextBio:966209
Genevestigator:P01123 GermOnline:YFL038C Uniprot:P01123
Length = 206
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 58/174 (33%), Positives = 103/174 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++R+ +++ TIG F + + VKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ++V+D+T SF +K W++E+ R ++ +VGNK DL+ R V + A
Sbjct: 78 YRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNI 288
++ + + ETSAL +ED FL +++ + +SQ++L+ ++ + D N+
Sbjct: 138 EFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNV 191
>ZFIN|ZDB-GENE-040426-1207 [details] [associations]
symbol:rab14l "RAB14, member RAS oncogene family,
like" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-1207
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HSSP:P01112 HOGENOM:HOG000233968
KO:K07881 OrthoDB:EOG4MGS89 EMBL:BC058341 IPI:IPI00485157
RefSeq:NP_956977.1 UniGene:Dr.82947 ProteinModelPortal:Q6PE19
SMR:Q6PE19 STRING:Q6PE19 PRIDE:Q6PE19 GeneID:393656 KEGG:dre:393656
CTD:393656 InParanoid:Q6PE19 NextBio:20814664 Bgee:Q6PE19
Uniprot:Q6PE19
Length = 215
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 61/152 (40%), Positives = 94/152 (61%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T + V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYR A AL+V+DIT+ ++ + +W+ + RN+ P V+ ++GNK DLE+ R+V EE
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLGSWLTDA-RNLTNPNTVIILIGNKADLEAQRDVTYEE 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
A +++ G + E SA + +ED FL +K
Sbjct: 139 AKQFAEENGLLFLEASAKTGENVEDAFLEAAK 170
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 301 (111.0 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 67/179 (37%), Positives = 105/179 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V VK Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYD---SDNITS 290
+++ G ++ ETSAL +E F + + +SQ+ + S R D S+N+ S
Sbjct: 141 AFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--SDRRDNDMSPSNNVVS 197
>UNIPROTKB|K7ERQ8 [details] [associations]
symbol:K7ERQ8 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 InterPro:IPR009464
Pfam:PF00071 Pfam:PF06466 PRINTS:PR00449 SMART:SM00175
TIGRFAMs:TIGR00231 EMBL:AC105024 EMBL:AC099811 EMBL:AC003104
Ensembl:ENST00000592574 Uniprot:K7ERQ8
Length = 282
Score = 300 (110.7 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 68/175 (38%), Positives = 98/175 (56%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V + A
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQ-ANE 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE---SLHTSSLRVYDSDNI 288
K G + ++ N+S+ +C S E + H S L D I
Sbjct: 151 TCKCNGWKNPKPPTAPRMDLQQPAANLSE--LCRSCEHPLADHVSHLENVSEDEI 203
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 300 (110.7 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 56/156 (35%), Positives = 95/156 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F++ TIG F + + ++KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V +E+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQAD 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS 271
++ G ++ETSA +++ F ++++ ++ S
Sbjct: 138 KLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKS 173
>ZFIN|ZDB-GENE-050320-28 [details] [associations]
symbol:rab6bb "RAB6B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050320-28 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OrthoDB:EOG4NP74D OMA:PEGMIDI
EMBL:BX649390 EMBL:BC091529 IPI:IPI00503279 RefSeq:NP_001013485.1
UniGene:Dr.28607 SMR:Q5BJD1 Ensembl:ENSDART00000042255
GeneID:541339 KEGG:dre:541339 InParanoid:Q5BJD1 NextBio:20879155
Uniprot:Q5BJD1
Length = 208
Score = 300 (110.7 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 68/197 (34%), Positives = 107/197 (54%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS++ R++ F + TIG F + + + + V+LQ+WDTAGQERFRS+ P Y
Sbjct: 24 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++ A++V+DIT +SF W+ +++ +++ +VGNKTDLE R++ EE
Sbjct: 84 RDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVIIMLVGNKTDLEEKRQITIEEGEQ 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGV 296
+K + + ETSA ++ +F V+ L ESL DN N G+
Sbjct: 144 RAKELNVMFIETSAKTGSNVKQLFRRVAAALP--GMESL---------DDN----NKEGM 188
Query: 297 VEITPLSSLDTPPLTEA 313
++I L PP TE+
Sbjct: 189 IDIK-LDKQPDPPATES 204
>TAIR|locus:2118500 [details] [associations]
symbol:RABG3A "RAB GTPase homolog G3A" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0005774
GO:GO:0007264 EMBL:CP002687 GO:GO:0015031 KO:K07976 IPI:IPI00938875
RefSeq:NP_001154217.1 UniGene:At.26414 ProteinModelPortal:F4JKR6
SMR:F4JKR6 PRIDE:F4JKR6 EnsemblPlants:AT4G09720.3 GeneID:826558
KEGG:ath:AT4G09720 OMA:NEHEQDI Uniprot:F4JKR6
Length = 217
Score = 230 (86.0 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ +Y+ K FS TIGA F T ++ +GE V LQ+WDTAGQERF+S+ +
Sbjct: 18 GVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAF 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKE-LKR 206
YR A+ LV+D+ SF ++TW +E LK+
Sbjct: 78 YRGADCCALVYDVNVLRSFDNLETWHEEFLKQ 109
Score = 95 (38.5 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 197 IKTW-VKELKRNVDEPLVLCVVGNKTDLE--SSREVNREEAFHYSKSIGGT-YYETSALQ 252
I W + E + + V+GNK D++ SSR V+ ++A + S G Y+ETSA
Sbjct: 113 IGMWTIAEASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKD 172
Query: 253 DQGIEDVFLNVSKGLICLSQESLHTSSLRVYD-SDNITSANPRG 295
D +++ FL ++K L+ E H + D +T P+G
Sbjct: 173 DFNVDEAFLTIAK--TALANE--HEQDIYFQGIPDAVTENEPKG 212
>DICTYBASE|DDB_G0276007 [details] [associations]
symbol:DDB_G0276007 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0276007 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AAFI02000013
eggNOG:COG1100 RefSeq:XP_001134601.1 ProteinModelPortal:Q1ZXK9
EnsemblProtists:DDB0233191 GeneID:8620262 KEGG:ddi:DDB_G0276007
Uniprot:Q1ZXK9
Length = 212
Score = 299 (110.3 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 62/169 (36%), Positives = 99/169 (58%)
Query: 118 GKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYR 177
GKTS+VVR + + FS PT+GA F + +KL+VWDTAGQE+F S+APMY++
Sbjct: 33 GKTSLVVRLVRETFSKESQPTVGAMFLNKTFQFSTHFIKLEVWDTAGQEKFNSLAPMYFK 92
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS-REVNREEAFH 236
+ A++VFD++ SF K W E K + EP ++ ++GNK DL + + + ++
Sbjct: 93 KSKVAIIVFDLSDRQSFVKAKMWNNEFKTHATEPAIMILIGNKCDLNKTVLQSDIDDFIR 152
Query: 237 YSK--SIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLH-TSSLRV 282
K SI TY+E SA ++ + ++F ++ G I +E T +L+V
Sbjct: 153 EEKENSIDFTYFEASAKENTNVNNIFETIA-GKIPWKEEIRERTEALQV 200
>GENEDB_PFALCIPARUM|PFL1500w [details] [associations]
symbol:Rab2 "Rab2, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0016787
EMBL:AE014188 KO:K07976 GenomeReviews:AE014188_GR
HOGENOM:HOG000233968 HSSP:P07560 OMA:RRDTFTH RefSeq:XP_001350706.1
ProteinModelPortal:Q8I5A9 SMR:Q8I5A9 PRIDE:Q8I5A9
EnsemblProtists:PFL1500w:mRNA GeneID:811352 KEGG:pfa:PFL1500w
EuPathDB:PlasmoDB:PF3D7_1231100 ProtClustDB:CLSZ2432247
Uniprot:Q8I5A9
Length = 213
Score = 299 (110.3 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 60/150 (40%), Positives = 93/150 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F IN+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 17 GVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDTAGQESFRSITRSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + W+ E+++N + + + +VGNK DLE REV+ EE
Sbjct: 77 YRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCDLER-REVSAEEGA 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ G + ETSA + +E+ FL ++
Sbjct: 136 QFARQNGLIFLETSAKTAKNVEEAFLYTAR 165
>UNIPROTKB|K7ERI8 [details] [associations]
symbol:K7ERI8 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 TIGRFAMs:TIGR00231 EMBL:AC105024 EMBL:AC099811
EMBL:AC003104 Ensembl:ENST00000592248 Uniprot:K7ERI8
Length = 161
Score = 299 (110.3 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 55/113 (48%), Positives = 77/113 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREV 229
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V
Sbjct: 92 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAV 144
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 299 (110.3 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 60/165 (36%), Positives = 98/165 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++VR++ F+ TIG F +++ KVKLQ+WDTAGQERFR++ Y
Sbjct: 30 GVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+D+T +F IK W K + + ++ L +VGNK+D+E+ R V ++
Sbjct: 90 YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET-RVVTADQGE 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
+K +G + E+SA D + ++F ++K L QE + ++ L
Sbjct: 149 ALAKELGIPFIESSAKNDDNVNEIFFTLAK----LIQEKIDSNKL 189
>WB|WBGene00004276 [details] [associations]
symbol:rab-14 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0090390
"phagosome acidification involved in apoptotic cell clearance"
evidence=IGI;IMP] [GO:0090387 "phagolysosome assembly involved in
apoptotic cell clearance" evidence=IGI;IMP] [GO:0045335 "phagocytic
vesicle" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
GO:GO:0015031 GO:GO:0005802 GO:GO:0005769 EMBL:Z79601
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA GO:GO:0090387 GO:GO:0090390 PIR:T23530
RefSeq:NP_510572.1 ProteinModelPortal:Q93874 SMR:Q93874
EnsemblMetazoa:K09A9.2.1 EnsemblMetazoa:K09A9.2.2 GeneID:181649
KEGG:cel:CELE_K09A9.2 UCSC:K09A9.2.1 CTD:181649 WormBase:K09A9.2
InParanoid:Q93874 NextBio:914820 ArrayExpress:Q93874 Uniprot:Q93874
Length = 210
Score = 299 (110.3 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 65/180 (36%), Positives = 102/180 (56%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AL+V+DIT+ ++ + +W+ + K + + ++GNK DLE R+V EEA
Sbjct: 80 YYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
+++ G T+ E SA +ED FL +K + +++ SL + +D T P+
Sbjct: 140 KAFAEENGLTFLECSAKTGSNVEDAFLETAKQIY----QNIQDGSLDLNAAD--TGVQPK 193
>TAIR|locus:2130624 [details] [associations]
symbol:RABB1C "AT4G17170" species:3702 "Arabidopsis
thaliana" [GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525
"GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005773
GO:GO:0007264 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 GO:GO:0006888 EMBL:Z97343 eggNOG:COG1100
EMBL:AL161545 KO:K07976 HOGENOM:HOG000233968 HSSP:P07560
ProtClustDB:PLN03108 EMBL:Y09314 EMBL:BT002513 EMBL:BT006251
IPI:IPI00517670 PIR:E71440 PIR:H85191 RefSeq:NP_193450.1
UniGene:At.22725 ProteinModelPortal:P92963 SMR:P92963 IntAct:P92963
PaxDb:P92963 PRIDE:P92963 EnsemblPlants:AT4G17170.1 GeneID:827428
KEGG:ath:AT4G17170 TAIR:At4g17170 InParanoid:P92963 OMA:RRDTFTH
PhylomeDB:P92963 Genevestigator:P92963 Uniprot:P92963
Length = 211
Score = 283 (104.7 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 57/168 (33%), Positives = 94/168 (55%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + +KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ + + + ++GNK DL R V+ EE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVY 283
++K G + E SA Q +E+ F+ + + Q+ + S Y
Sbjct: 136 QFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESY 183
Score = 38 (18.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 386 GLKVSK--IPVPTRNREGATT 404
G+KV IP P+ R+G+T+
Sbjct: 184 GIKVGYGGIPGPSGGRDGSTS 204
>ASPGD|ASPL0000062894 [details] [associations]
symbol:srgE species:162425 "Emericella nidulans"
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0071852
"fungal-type cell wall organization or biogenesis" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 OMA:ERSAHDE ProteinModelPortal:C8VTZ0
EnsemblFungi:CADANIAT00002359 Uniprot:C8VTZ0
Length = 210
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 89/148 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 19 GTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI+++ ++ + W+KEL+ + D +V+ +VGNK+DL R V EEA
Sbjct: 79 YRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAK 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
++ ++ ETSAL +E F N+
Sbjct: 139 QFASENNLSFIETSALDASNVELAFQNI 166
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|E1BLD5 [details] [associations]
symbol:RAB37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030141 "secretory granule" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0030141 GO:GO:0005793
GeneTree:ENSGT00700000104031 OMA:IHEYAQS EMBL:DAAA02049538
EMBL:DAAA02049539 EMBL:DAAA02049540 EMBL:DAAA02049541
EMBL:DAAA02049542 EMBL:DAAA02049543 EMBL:DAAA02049544
EMBL:DAAA02049545 EMBL:DAAA02049546 EMBL:DAAA02049547
EMBL:DAAA02049548 EMBL:DAAA02049549 EMBL:DAAA02049550
EMBL:DAAA02049551 EMBL:DAAA02049552 EMBL:DAAA02049553
EMBL:DAAA02049554 EMBL:DAAA02049555 EMBL:DAAA02049556
IPI:IPI00689178 UniGene:Bt.103470 ProteinModelPortal:E1BLD5
Ensembl:ENSBTAT00000010645 NextBio:20898856 Uniprot:E1BLD5
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 63/170 (37%), Positives = 96/170 (56%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++V++ GK S T+G F + V +VKLQ+WDTAGQERFRS+
Sbjct: 32 GVGKTSLLVQFDQGKFVPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHA 91
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A A LL++DIT SF I+ W+ E+ +V+ ++GNK D+ + R + E+
Sbjct: 92 YYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSTERVIRSEDG 151
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
++ G + ETSA +E FL ++K L ++ S ++ D
Sbjct: 152 EMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRARRQADEPSFQIRD 201
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|Q29RR0 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9913 "Bos
taurus" [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0035272 "exocrine
system development" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031
EMBL:BC114066 IPI:IPI00702165 RefSeq:NP_001039674.1
UniGene:Bt.13735 ProteinModelPortal:Q29RR0 SMR:Q29RR0 PRIDE:Q29RR0
Ensembl:ENSBTAT00000000348 GeneID:515675 KEGG:bta:515675 CTD:25837
InParanoid:Q29RR0 KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9
NextBio:20871955 GO:GO:0035272 Uniprot:Q29RR0
Length = 256
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 62/153 (40%), Positives = 93/153 (60%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKT ++VR+ G + T+G F ++V KVKLQ+WDTAGQERFRS+
Sbjct: 73 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHA 132
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A+A LL++D+T SF +I+ W+ E++ + + +VL ++GNK D R V RE+A
Sbjct: 133 YYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDA 192
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+K G + ETSA ++ F ++K L
Sbjct: 193 EKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|A8MSP2 [details] [associations]
symbol:RAB37 "cDNA FLJ45130 fis, clone BRAWH3037428, highly
similar to Homo sapiens RAB37, member RAS oncogene family (RAB37),
transcript variant 3, mRNA" species:9606 "Homo sapiens" [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:CH471099 HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805
HOGENOM:HOG000233968 OrthoDB:EOG4VMFG9 UniGene:Hs.351413
HGNC:HGNC:30268 ChiTaRS:RAB37 EMBL:AK127073 IPI:IPI00788648
SMR:A8MSP2 STRING:A8MSP2 Ensembl:ENST00000340415 UCSC:uc002jld.2
Uniprot:A8MSP2
Length = 182
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/151 (40%), Positives = 89/151 (58%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++V++ GK S T+G F + V +VKLQ+WDTAGQERFRS+
Sbjct: 32 GVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHA 91
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A A LL++DIT SF I+ W+ E+ +V+ ++GNK D+ S R + E+
Sbjct: 92 YYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDG 151
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++ G + ETSA +E FL ++K
Sbjct: 152 ETLAREYGVPFLETSAKTGMNVELAFLAIAK 182
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>RGD|1311286 [details] [associations]
symbol:Rab39a "RAB39A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0090383
"phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1311286 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 EMBL:CH473975
GeneTree:ENSGT00690000101664 CTD:54734 KO:K07924 OMA:VEDGWDG
OrthoDB:EOG43JC5J IPI:IPI00203760 RefSeq:NP_001101618.1
UniGene:Rn.228440 Ensembl:ENSRNOT00000011913 GeneID:315668
KEGG:rno:315668 UCSC:RGD:1311286 NextBio:669630 Uniprot:D3ZZP2
Length = 217
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 70/168 (41%), Positives = 96/168 (57%)
Query: 117 VGKTSMVVRYIGKMF----SHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSM 171
VGK+ ++ R+ F S PT+G FF+ + + K +KLQ+WDTAGQERFRS+
Sbjct: 19 VGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSI 78
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVN 230
YYRN+ LVFDIT SF +K W++E K +V +V +VG+K DL S R+V+
Sbjct: 79 TRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVS 138
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIE--------DVFLNVSKGLICL 270
REEA SK G Y ETSA +E D++ + KG IC+
Sbjct: 139 REEAEKLSKDCGMKYIETSAKDATNVEESFTILARDIYELIKKGDICI 186
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTI 168
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 67/180 (37%), Positives = 102/180 (56%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T + V VK Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T+ +F + W+KELK + D +V+ +VGNK+DL V E+
Sbjct: 83 YRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGK 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y++ + ETSAL+ +ED F V L+Q TS +V ++ ++ P+G
Sbjct: 143 SYAEQESLCFMETSALEATNVEDAFAEV------LTQIYRITSKKQVEAGEDGNASVPKG 196
>TAIR|locus:2140079 [details] [associations]
symbol:RABA4B "RAB GTPase homolog A4B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IDA]
[GO:0032588 "trans-Golgi network membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0031901 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596 GO:GO:0032456
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:CLSN2685897 EMBL:U46926 EMBL:AY072448
EMBL:AY128914 EMBL:AY088624 IPI:IPI00516291 PIR:T06105
RefSeq:NP_195709.1 UniGene:At.1649 UniGene:At.48966
ProteinModelPortal:Q9SMQ6 SMR:Q9SMQ6 STRING:Q9SMQ6 PaxDb:Q9SMQ6
PRIDE:Q9SMQ6 EnsemblPlants:AT4G39990.1 GeneID:830160
KEGG:ath:AT4G39990 TAIR:At4g39990 InParanoid:Q9SMQ6 OMA:FEHIPRW
PhylomeDB:Q9SMQ6 Genevestigator:Q9SMQ6 Uniprot:Q9SMQ6
Length = 224
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/144 (38%), Positives = 91/144 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ ++ R+ FS TIG F T +++ + +K Q+WDTAGQER+R++ YY
Sbjct: 28 VGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRAVTSAYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A+LV+D+T+ +F I W++EL+ + D+ +V+ ++GNK+DLE R V E+A
Sbjct: 88 RGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKE 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVF 260
+++ G + ETSAL +E+ F
Sbjct: 148 FAEKEGLFFLETSALNATNVENSF 171
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 55/145 (37%), Positives = 93/145 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS + TIG F +++ +VKLQ+WDTAGQERFR++ Y
Sbjct: 20 GVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W++E++ N D + +VGNK + R V +A
Sbjct: 80 YRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS-VQKVLVGNKCEENERRVVLESDAR 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+Y++S+ +++ETSA +D+ +E +F
Sbjct: 139 NYAQSMNISFFETSAKEDKNVEPMF 163
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 57/160 (35%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D +S+ V +A
Sbjct: 78 YRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPNSKVVETNDAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ +G + +ETSA ++ +E++F +++ ++ +ES+
Sbjct: 137 KFAEQMGISLFETSAKENVNVEEMFNCITELVLRAKKESV 176
>ZFIN|ZDB-GENE-040822-15 [details] [associations]
symbol:rab4b "RAB4B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040822-15 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:BC080219 IPI:IPI00495099 RefSeq:NP_001004002.1
UniGene:Dr.85594 ProteinModelPortal:Q68EK7 SMR:Q68EK7 PRIDE:Q68EK7
GeneID:445498 KEGG:dre:445498 InParanoid:Q68EK7 NextBio:20832167
Uniprot:Q68EK7
Length = 213
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 59/152 (38%), Positives = 91/152 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I F + TIG F + +NVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 18 GTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + +V+ + GNK DL++ REV EA
Sbjct: 78 YRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEAS 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + ETSAL + +E+ FL ++ +
Sbjct: 138 RFAQENELMFLETSALTGENVEEAFLKCARSI 169
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 63/148 (42%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRY-IGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
G GKT +V R+ G H TIG F I V ++KLQ+WDTAGQERFR++
Sbjct: 31 GTGKTCIVDRFKTGNYIERH-GNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTITQS 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+AN L+V+DIT+ SF+ ++ W++E++R +++ +VGNK DLE REV+ EEA
Sbjct: 90 YYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEA 149
Query: 235 FHYSKSIGGTYY--ETSALQDQGIEDVF 260
+ I + ETSA ++ +ED F
Sbjct: 150 RQMCQYIPEILFVMETSAKENMNVEDAF 177
>DICTYBASE|DDB_G0272138 [details] [associations]
symbol:rab2B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0272138 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000008 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:Q15907 OMA:EEGLFFM RefSeq:XP_645208.1
ProteinModelPortal:Q559X6 SMR:Q559X6 PRIDE:Q559X6
EnsemblProtists:DDB0229402 GeneID:8618381 KEGG:ddi:DDB_G0272138
Uniprot:Q559X6
Length = 202
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 52/144 (36%), Positives = 96/144 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK++++++++ K F+ + TIG F + IN+ + ++KLQ+WDTAGQE+FRS+ YY
Sbjct: 35 VGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYY 94
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A++V+DIT+ SF ++ +W+ + ++ + ++GNK DLE++R+V+ EA
Sbjct: 95 RGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKE 154
Query: 237 YSKSIGGTYYETSALQDQGIEDVF 260
+++ G ++ETSA +++ F
Sbjct: 155 FAEKNGLMFFETSAKTALNVDEAF 178
>FB|FBgn0052670 [details] [associations]
symbol:Rab9Fb "Rab at 9Fb" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
KO:K07976 HSSP:P07560 GeneTree:ENSGT00700000104049 EMBL:BT024998
RefSeq:NP_727472.1 UniGene:Dm.31082 SMR:Q8IR98
EnsemblMetazoa:FBtr0073401 GeneID:32029 KEGG:dme:Dmel_CG32670
UCSC:CG32670-RA CTD:32029 FlyBase:FBgn0052670 InParanoid:Q8IR98
OMA:KTCLLQR OrthoDB:EOG4RN8RG GenomeRNAi:32029 NextBio:776451
Uniprot:Q8IR98
Length = 214
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 60/154 (38%), Positives = 91/154 (59%)
Query: 115 LGVGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
+GVGK+ +++R+ F+ H+ T+G F + + V LQ+WDTAG ERF+S+ P
Sbjct: 16 IGVGKSCLLMRFSDNRFTEKHVC-TVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLLP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
YYR A+ LLV+DIT SF I W+KE++R E + + +VGNK D +R+V E+
Sbjct: 75 SYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQ 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
F+Y+ +YE SA + DVF +S G+
Sbjct: 135 GFNYANHRALGFYEVSAKSGANVNDVFNMLSVGI 168
>UNIPROTKB|F1PDF8 [details] [associations]
symbol:RAB39B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 EMBL:AAEX03027097
Ensembl:ENSCAFT00000031217 Uniprot:F1PDF8
Length = 210
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 61/153 (39%), Positives = 94/153 (61%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ G+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 17 VGKSCLIRRFEGR-FAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E K +V +V +VG+K DL++ R+V R EA
Sbjct: 76 YRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F ++++ +
Sbjct: 136 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 168
>UNIPROTKB|I3LR74 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9823 "Sus
scrofa" [GO:2000286 "receptor internalization involved in canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0001726 "ruffle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 GO:GO:0005769 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 GeneTree:ENSGT00640000091139
OMA:RAVDFQV Ensembl:ENSSSCT00000027025 Uniprot:I3LR74
Length = 148
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 55/114 (48%), Positives = 77/114 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN 230
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+
Sbjct: 91 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVD 144
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 55/153 (35%), Positives = 93/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F+ TIG F +++ ++KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V RE+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ ++ETSA +++ F ++++ ++
Sbjct: 138 KLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/147 (39%), Positives = 89/147 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ ++ R+ FS TIG F T + + +K Q+WDTAGQER+R++ YY
Sbjct: 26 VGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQERYRAVTSAYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A+LV+DIT+ SF + W++EL+ + D+ +V+ ++GNKTDL + R V E+A
Sbjct: 86 RGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKE 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ + ETSAL +E FL V
Sbjct: 146 FAQRENLFFMETSALDSNNVEPSFLTV 172
>ZFIN|ZDB-GENE-050417-216 [details] [associations]
symbol:zgc:112183 "zgc:112183" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-050417-216 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 KO:K07914
EMBL:BC093248 IPI:IPI00507050 RefSeq:NP_001017715.1
UniGene:Dr.81352 ProteinModelPortal:Q567B0 SMR:Q567B0 GeneID:550410
KEGG:dre:550410 NextBio:20879659 Uniprot:Q567B0
Length = 230
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 71/209 (33%), Positives = 109/209 (52%)
Query: 80 LVSNKIKVGLLSDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYI-GKMFSHHI 135
L N +K G + S+N F+ LG VGKT ++VR+ G +
Sbjct: 8 LTENGVKNGTSRNVLERCASVNEYFDIAFKV--MLLGDSAVGKTCVLVRFKDGAFLGGNF 65
Query: 136 SPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFA 195
T+G F + V KVKLQ+WDTAGQERFRS+ YYR+A A LL++DIT+ SF
Sbjct: 66 IATVGIDFRNKVVTVDNMKVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITRKSSFD 125
Query: 196 AIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQG 255
I+ W+ E+ + +V+ ++GNK+D+ + R + EE +K G + ETSA
Sbjct: 126 NIRAWLTEIYEYAQKDVVIMLLGNKSDMAAERVITHEEGEKLAKEYGVPFMETSAKTGVN 185
Query: 256 IEDVFLNVSKGLICLSQESLHTSSLRVYD 284
+E F +++ L + E H +++D
Sbjct: 186 VELAFHAIARELKHRNLEQPHEPKFKIHD 214
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 65/187 (34%), Positives = 103/187 (55%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R+ F T+G F + + K++LQ+WDTAGQERF S+ Y
Sbjct: 45 GVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAY 104
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT+ +F + W+K + + E L +VGNK D ES R ++R++A
Sbjct: 105 YRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESDRAISRQQAE 164
Query: 236 HYSKSIGGTYY-ETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
++ I G + E SA + ++++FL + + LS+ L S + S+++ S P
Sbjct: 165 RFASRISGMRFCEASAKDNFNVDEIFLKLVDDI--LSKMPLEVPSKEL--SNSVLSLQPE 220
Query: 295 GVVEITP 301
EI P
Sbjct: 221 P--EIPP 225
>DICTYBASE|DDB_G0292406 [details] [associations]
symbol:rab4 "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0292406
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000155_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000190 eggNOG:COG1100 KO:K07976 HSSP:P61019 OMA:SPNIVIL
RefSeq:XP_629589.1 ProteinModelPortal:Q54DA7 SMR:Q54DA7
PRIDE:Q54DA7 EnsemblProtists:DDB0229407 GeneID:8628649
KEGG:ddi:DDB_G0292406 Uniprot:Q54DA7
Length = 205
Score = 295 (108.9 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ ++ R+I F + TIG F + +++ VKLQ+WDTAGQERFRS+ YY
Sbjct: 18 VGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + LV+D+T S+ I W+ ++K + + +VGNK DL REV EA
Sbjct: 78 RGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASR 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC-LSQESLHTSSLRVY---DSDNIT 289
++ G + ETSAL +G+E++FL ++ ++ + ++ L V DS N+T
Sbjct: 138 IAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSGEVNLEHLGVQISSDSGNVT 194
>UNIPROTKB|Q148J4 [details] [associations]
symbol:RAB2A "RAB2A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101805 CTD:5862
OrthoDB:EOG41G354 OMA:KIGPQHS EMBL:DAAA02038385 EMBL:BC118271
IPI:IPI00695881 RefSeq:NP_001068822.1 UniGene:Bt.64131 SMR:Q148J4
Ensembl:ENSBTAT00000001253 GeneID:508373 KEGG:bta:508373
NextBio:20868488 Uniprot:Q148J4
Length = 189
Score = 295 (108.9 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 57/143 (39%), Positives = 91/143 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ + +V+ ++GNK+DLES REV +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIED 258
+++ G + ETSA +E+
Sbjct: 136 AFAREHGLIFMETSAKTASNVEE 158
>UNIPROTKB|Q2TA29 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0072659 "protein localization to
plasma membrane" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175
GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:Q15907 EMBL:BC111143
IPI:IPI00695221 RefSeq:NP_001033251.1 UniGene:Bt.44630
ProteinModelPortal:Q2TA29 SMR:Q2TA29 STRING:Q2TA29 PRIDE:Q2TA29
GeneID:534708 KEGG:bta:534708 CTD:8766 InParanoid:Q2TA29 KO:K07904
OrthoDB:EOG4RR6J7 NextBio:20876511 Uniprot:Q2TA29
Length = 216
Score = 295 (108.9 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 58/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKNGLSFIETSALDYTNVEAAFQTI 168
>MGI|MGI:2442855 [details] [associations]
symbol:Rab39 "RAB39, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0090383 "phagosome
acidification" evidence=ISO] [GO:0090385 "phagosome-lysosome
fusion" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2442855 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 CleanEx:MM_RAB39 KO:K07924 OMA:VEDGWDG
OrthoDB:EOG43JC5J EMBL:AK049038 EMBL:AK053487 EMBL:BC049787
IPI:IPI00221836 RefSeq:NP_780771.1 UniGene:Mm.290285
ProteinModelPortal:Q8BHD0 SMR:Q8BHD0 STRING:Q8BHD0
PhosphoSite:Q8BHD0 PaxDb:Q8BHD0 PRIDE:Q8BHD0
Ensembl:ENSMUST00000068449 GeneID:270160 KEGG:mmu:270160 CTD:270160
InParanoid:Q8BHD0 NextBio:393265 Bgee:Q8BHD0 Genevestigator:Q8BHD0
GermOnline:ENSMUSG00000055069 Uniprot:Q8BHD0
Length = 217
Score = 295 (108.9 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 69/168 (41%), Positives = 96/168 (57%)
Query: 117 VGKTSMVVRYI-GKMFSHH---ISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSM 171
VGK+ ++ R+ G+ H PT+G FF+ + + K +KLQ+WDTAGQERFRS+
Sbjct: 19 VGKSCLLHRFTQGRFPGLHSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSI 78
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVN 230
YYRN+ LVFDIT SF +K W++E K +V +V +VG+K DL S R+V+
Sbjct: 79 TRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVS 138
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIE--------DVFLNVSKGLICL 270
REEA S G Y ETSA +E D++ + KG IC+
Sbjct: 139 REEAERLSTDCGMKYIETSAKDATNVEESFTILTRDIYELIKKGEICI 186
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 295 (108.9 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 55/153 (35%), Positives = 92/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++R+ F+ TIG F + + ++KLQVWDTAGQERF+++ Y
Sbjct: 18 GVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W+K +K N + ++GNK D+E+ R+V RE+A
Sbjct: 78 YRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ ++ETSA +++ F ++++ ++
Sbjct: 138 RLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
>FB|FBgn0015797 [details] [associations]
symbol:Rab6 "Rab6" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0001745 "compound
eye morphogenesis" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007293 "germarium-derived egg chamber formation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008103 "oocyte
microtubule cytoskeleton polarization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0006887
"exocytosis" evidence=IMP] [GO:0031982 "vesicle" evidence=ISS]
[GO:0045467 "R7 cell development" evidence=IMP] [GO:0060078
"regulation of postsynaptic membrane potential" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007411 GO:GO:0008103
GO:GO:0007264 EMBL:AE014134 GO:GO:0015031 GO:GO:0045467
GO:GO:0003924 GO:GO:0006887 eggNOG:COG1100 GO:GO:0007293
GO:GO:0045451 KO:K07976 GO:GO:0060078 GeneTree:ENSGT00600000084341
OMA:TTKWIED EMBL:AY060261 EMBL:D84314 RefSeq:NP_477172.1
UniGene:Dm.4067 PDB:2Y8E PDBsum:2Y8E SMR:O18334 MINT:MINT-828566
STRING:O18334 EnsemblMetazoa:FBtr0080361 GeneID:34636
KEGG:dme:Dmel_CG6601 UCSC:CG6601-RA CTD:34636 FlyBase:FBgn0015797
InParanoid:O18334 OrthoDB:EOG45X6C4 EvolutionaryTrace:O18334
GenomeRNAi:34636 NextBio:789437 Uniprot:O18334
Length = 208
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 63/183 (34%), Positives = 105/183 (57%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS++ R++ F + TIG F + + + + V+LQ+WDTAGQERFRS+ P Y
Sbjct: 23 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++ A++V+DIT +SF W+ +++ +++ +VGNKTDL R+V+ EE
Sbjct: 83 RDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL-SQESLHTSSLR---VYDSDNITSAN 292
+K + + ETSA ++ +F V+ L + S E+ + ++ + DS N T +
Sbjct: 143 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDMQEVVLKDSPNETK-D 201
Query: 293 PRG 295
P G
Sbjct: 202 PEG 204
>UNIPROTKB|Q17QU4 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0050808 "synapse organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0050808 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J EMBL:BC118177
IPI:IPI00691206 RefSeq:NP_001069563.1 UniGene:Bt.55967
ProteinModelPortal:Q17QU4 PRIDE:Q17QU4 Ensembl:ENSBTAT00000026354
GeneID:537560 KEGG:bta:537560 CTD:116442 InParanoid:Q17QU4
KO:K07925 OMA:TKSDRRC NextBio:20877158 Uniprot:Q17QU4
Length = 213
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 60/153 (39%), Positives = 92/153 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 19 VGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E K +V +V +VG+K DL++ R+V R EA
Sbjct: 79 YRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F ++++ +
Sbjct: 139 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
>UNIPROTKB|E2RLP0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 EMBL:AAEX03014730 EMBL:AAEX03014731
EMBL:AAEX03014732 Ensembl:ENSCAFT00000016115 Uniprot:E2RLP0
Length = 201
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 56/160 (35%), Positives = 98/160 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GV K+S+++R+ FS I TIG F + + KVKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVVKSSLLLRFADNTFSASILTTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SF +K W+ E+ +N D+ + +VGNK D + V E+A+
Sbjct: 78 YRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVETEDAY 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ +G +ETSA ++ +E++F +++ ++ +++L
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>UNIPROTKB|Q96DA2 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0050808
"synapse organization" evidence=ISS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
Orphanet:777 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL356738 HOGENOM:HOG000233968 OrthoDB:EOG43JC5J CTD:116442
KO:K07925 OMA:TKSDRRC EMBL:AY052478 EMBL:AL834460 EMBL:BC009714
IPI:IPI00060801 RefSeq:NP_741995.1 UniGene:Hs.632832
ProteinModelPortal:Q96DA2 SMR:Q96DA2 STRING:Q96DA2
PhosphoSite:Q96DA2 DMDM:27734447 PaxDb:Q96DA2 PeptideAtlas:Q96DA2
PRIDE:Q96DA2 DNASU:116442 Ensembl:ENST00000369454 GeneID:116442
KEGG:hsa:116442 UCSC:uc004fne.3 GeneCards:GC0XM154487
HGNC:HGNC:16499 HPA:HPA001114 MIM:300271 MIM:300774
neXtProt:NX_Q96DA2 PharmGKB:PA34131 InParanoid:Q96DA2
PhylomeDB:Q96DA2 GenomeRNAi:116442 NextBio:79915 Bgee:Q96DA2
CleanEx:HS_RAB39B Genevestigator:Q96DA2 GermOnline:ENSG00000155961
Uniprot:Q96DA2
Length = 213
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 60/153 (39%), Positives = 92/153 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 19 VGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E K +V +V +VG+K DL++ R+V R EA
Sbjct: 79 YRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F ++++ +
Sbjct: 139 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
>UNIPROTKB|F2Z552 [details] [associations]
symbol:LOC100516775 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0016192
GO:GO:0015031 GO:GO:0050808 GeneTree:ENSGT00690000101664 KO:K07925
OMA:TKSDRRC EMBL:CU861979 RefSeq:XP_003135565.1
ProteinModelPortal:F2Z552 PRIDE:F2Z552 Ensembl:ENSSSCT00000022617
GeneID:100516775 KEGG:ssc:100516775 Uniprot:F2Z552
Length = 213
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 60/153 (39%), Positives = 92/153 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 19 VGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E K +V +V +VG+K DL++ R+V R EA
Sbjct: 79 YRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F ++++ +
Sbjct: 139 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
>MGI|MGI:1915040 [details] [associations]
symbol:Rab39b "RAB39B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0050808 "synapse organization" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1915040
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
CTD:116442 KO:K07925 EMBL:AK039013 EMBL:AK048981 EMBL:AK160737
EMBL:BC050853 EMBL:BC052472 IPI:IPI00272230 RefSeq:NP_780331.1
UniGene:Mm.45148 ProteinModelPortal:Q8BHC1 SMR:Q8BHC1
PhosphoSite:Q8BHC1 PaxDb:Q8BHC1 PRIDE:Q8BHC1
Ensembl:ENSMUST00000033545 GeneID:67790 KEGG:mmu:67790
InParanoid:Q8BHC1 NextBio:325571 Bgee:Q8BHC1 CleanEx:MM_RAB39B
Genevestigator:Q8BHC1 GermOnline:ENSMUSG00000031202 Uniprot:Q8BHC1
Length = 213
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 60/153 (39%), Positives = 92/153 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 19 VGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E K +V +V +VG+K DL++ R+V R EA
Sbjct: 79 YRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F ++++ +
Sbjct: 139 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
>TAIR|locus:2065858 [details] [associations]
symbol:RABA5d "RAB GTPase homolog A5D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007071 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 ProtClustDB:CLSN2683060
EMBL:BT009720 EMBL:AK227705 EMBL:AY085494 IPI:IPI00523233
PIR:G84723 RefSeq:NP_180726.1 UniGene:At.14359 UniGene:At.66393
ProteinModelPortal:Q9SIP0 SMR:Q9SIP0 PaxDb:Q9SIP0 PRIDE:Q9SIP0
EnsemblPlants:AT2G31680.1 GeneID:817724 KEGG:ath:AT2G31680
TAIR:At2g31680 InParanoid:Q9SIP0 OMA:ISRRSTF PhylomeDB:Q9SIP0
Genevestigator:Q9SIP0 Uniprot:Q9SIP0
Length = 219
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 62/166 (37%), Positives = 100/166 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK++++ RY F+ H TIG F T + + +VK Q+WDTAGQERFR++ YY
Sbjct: 23 VGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQERFRAVTSAYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AL+V+DI++ +F ++ W+ ELK + D + +VGNK DLES R V+ EE
Sbjct: 83 RGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVSVEEGKA 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC-LSQESLHTSSLR 281
+++ G + ETSAL ++ F V + + +S++ L++ + +
Sbjct: 143 LAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYK 188
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 56/152 (36%), Positives = 88/152 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT ++ R+ F++ TIG F I + K+KLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF IK W++ ++ + + ++GNK D+E REV+R+
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ G + ETSA + I++ F +++ +
Sbjct: 138 QLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>WB|WBGene00004275 [details] [associations]
symbol:rab-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0040010 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
KO:K07904 EMBL:Z93391 RefSeq:NP_001251691.1
ProteinModelPortal:Q1ZXR4 SMR:Q1ZXR4 PaxDb:Q1ZXR4
EnsemblMetazoa:W04G5.2a GeneID:4363014 KEGG:cel:CELE_W04G5.2
UCSC:W04G5.2 CTD:4363014 WormBase:W04G5.2a InParanoid:Q1ZXR4
NextBio:959487 Uniprot:Q1ZXR4
Length = 198
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 61/148 (41%), Positives = 95/148 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ PTIG F T I+V VK+Q+WDTAG ERFR A Y
Sbjct: 18 GVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI+++ ++ +++ W+K L+ + +E +V+ +VGNK+DL S V +EA
Sbjct: 78 YRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL--SHAVPTDEAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
Y++ ++ ETSAL + +E F N+
Sbjct: 136 IYAERNHISFIETSALDNTNVEAAFTNI 163
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 56/152 (36%), Positives = 88/152 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT ++ R+ F++ TIG F I + K+KLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF IK W++ ++ + + ++GNK D+E REV+R+
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ G + ETSA + I++ F +++ +
Sbjct: 138 QLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>ZFIN|ZDB-GENE-070620-7 [details] [associations]
symbol:zgc:165464 "zgc:165464" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070620-7 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
KO:K07925 OMA:TKSDRRC EMBL:CT025910 EMBL:BC142804 IPI:IPI00485605
RefSeq:NP_001092211.1 UniGene:Dr.111079 Ensembl:ENSDART00000019199
GeneID:562596 KEGG:dre:562596 NextBio:20884483 Uniprot:A5PLA1
Length = 213
Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 59/153 (38%), Positives = 92/153 (60%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+ ++ R+ F+ PT+G FF+ + + K +KLQ+WDTAGQERFRS+ Y
Sbjct: 19 VGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLESSREVNREEA 234
YRN+ LL+FDIT SF + W++E + +V +V +VG+K DLE R+V+++EA
Sbjct: 79 YRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFILVGHKCDLEQQRQVSQQEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + G Y ETSA +E F +++ +
Sbjct: 139 EKLAAAYGMRYVETSARDAINVEKAFTELTRDI 171
>DICTYBASE|DDB_G0271736 [details] [associations]
symbol:rabC "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0271736
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000006
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 EMBL:L21013
RefSeq:XP_645455.1 ProteinModelPortal:P34143 PRIDE:P34143
EnsemblProtists:DDB0185061 GeneID:8618083 KEGG:ddi:DDB_G0271736
OMA:PPSQQNC Uniprot:P34143
Length = 196
Score = 293 (108.2 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 54/147 (36%), Positives = 91/147 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN--KVKLQVWDTAGQERFRSMAP 173
GVGK+S++VR+ FS H +PT+G F I E VKLQ+WDTAGQERF+S+
Sbjct: 16 GVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETGQTVKLQLWDTAGQERFKSITQ 75
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
+YR ++ ++V+D+T SF K WV+++ + + +++ +VGNK+D+ + R+V E+
Sbjct: 76 TFYRGSHGVIVVYDVTDPKSFERCKNWVEDINQYTQDGMIIILVGNKSDMVAQRKVTFEQ 135
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVF 260
++ + + E SA ++ G+ VF
Sbjct: 136 GQEMAEQLKTKFLEVSAKENNGVTQVF 162
>UNIPROTKB|O97572 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9986
"Oryctolagus cuniculus" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 OrthoDB:EOG4QFWF4
EMBL:AF050174 RefSeq:NP_001075503.1 UniGene:Ocu.2322
ProteinModelPortal:O97572 SMR:O97572 PRIDE:O97572 GeneID:100008682
Uniprot:O97572
Length = 207
Score = 293 (108.2 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 65/165 (39%), Positives = 103/165 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ +Y+ K FS+ TIGA F T ++ V + V +Q+WDTAGQERF+S++ +
Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAF 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKE--LKRNVDEP--LVLCVVGNKTDLESSREV-- 229
YR A+ +LVFD+T ++F + +W E ++ + +P V+GNK DLE+ R+V
Sbjct: 78 YRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLEN-RQVAT 136
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
R +A+ YSK+ Y+ETSA + +E F +++ L QE+
Sbjct: 137 KRAQAWSYSKN-NIPYFETSAKEAINVEQAFQTIARN--ALKQET 178
>RGD|620890 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=ISO;ISS]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA;ISO;IDA;TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0019002 "GMP binding" evidence=ISO;ISS] [GO:0030658 "transport
vesicle membrane" evidence=IEA] [GO:0030667 "secretory granule
membrane" evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=IDA] [GO:0035272 "exocrine system development"
evidence=ISO;IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO;ISS] [GO:0045055 "regulated secretory
pathway" evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 293 (108.2 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 65/170 (38%), Positives = 97/170 (57%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKT ++VR+ G + T+G F ++V KVKLQ+WDTAGQERFRS+
Sbjct: 74 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHA 133
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A+A LL++DIT SF I+ W+ E++ + +VL ++GNK D R V RE+
Sbjct: 134 YYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDG 193
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
+K G + ETSA ++ F ++K L S ++ R++D
Sbjct: 194 EKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFRLHD 243
>UNIPROTKB|P51156 [details] [associations]
symbol:Rab26 "Ras-related protein Rab-26" species:10116
"Rattus norvegicus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 293 (108.2 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 65/170 (38%), Positives = 97/170 (57%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKT ++VR+ G + T+G F ++V KVKLQ+WDTAGQERFRS+
Sbjct: 74 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHA 133
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A+A LL++DIT SF I+ W+ E++ + +VL ++GNK D R V RE+
Sbjct: 134 YYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDG 193
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
+K G + ETSA ++ F ++K L S ++ R++D
Sbjct: 194 EKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFRLHD 243
>ZFIN|ZDB-GENE-031118-188 [details] [associations]
symbol:rab11al "RAB11a, member RAS oncogene family,
like" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-188
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
KO:K07904 EMBL:BC055141 IPI:IPI00491156 RefSeq:NP_956417.1
UniGene:Dr.79024 ProteinModelPortal:Q7SY35 SMR:Q7SY35 STRING:Q7SY35
PRIDE:Q7SY35 GeneID:386994 KEGG:dre:386994 CTD:386994
InParanoid:Q7SY35 OrthoDB:EOG4C87T9 NextBio:20814108
ArrayExpress:Q7SY35 Bgee:Q7SY35 Uniprot:Q7SY35
Length = 216
Score = 293 (108.2 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 59/148 (39%), Positives = 91/148 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I+V VK Q+WDTAGQER+R++ Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTAGQERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ + W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 81 YRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVPMDEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
+++ G ++ ETSAL +E F +
Sbjct: 141 AFAEKHGLSFLETSALDSSNVELAFQTI 168
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 292 (107.8 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 62/181 (34%), Positives = 105/181 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ FS TIG F +++ +VKLQ+WDTAGQERFR++ Y
Sbjct: 18 GVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITSTY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + ++V+D+T SFA ++ W++E++ N D + +VGNK D + V E+A
Sbjct: 78 YRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKVVITEDAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI-TSANPR 294
++K + +ETSA + +E++FL++++ ++ L TS D + NP+
Sbjct: 137 RFAKQMDIELFETSAKDNINVENMFLSITRQVL---DHKLRTSP-NEQQKDTLHLKPNPK 192
Query: 295 G 295
G
Sbjct: 193 G 193
WARNING: HSPs involving 1528 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 617 599 0.00085 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1778
No. of states in DFA: 616 (65 KB)
Total size of DFA: 324 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.92u 0.08s 50.00t Elapsed: 00:00:12
Total cpu time: 49.95u 0.08s 50.03t Elapsed: 00:00:12
Start: Thu Aug 15 13:40:52 2013 End: Thu Aug 15 13:41:04 2013
WARNINGS ISSUED: 2