RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3029
(617 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 133 bits (336), Expect = 5e-37
Identities = 52/150 (34%), Positives = 85/150 (56%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT ++ R+ F+ TIG F I + ++KLQ+WDTAGQERFR++ Y
Sbjct: 16 GVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT SF I+ W++ ++ + + ++GNK D+ R+V++E
Sbjct: 76 YRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ G + ETSA + +E+ F +++
Sbjct: 136 KLALDYGIKFMETSAKANINVENAFFTLAR 165
Score = 46.3 bits (109), Expect = 2e-06
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT ++ R+ F+ TIG F I + ++KLQ+
Sbjct: 16 GVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 59
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 133 bits (335), Expect = 6e-37
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++VR++ F+ TIG F +++ KVKLQ+WDTAGQERFR++ Y
Sbjct: 12 GVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+DIT +F IK W K + + ++ L +VGNK+D+E +R V ++
Sbjct: 72 YRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-TRVVTADQGE 130
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+K +G + E+SA D + ++F ++K
Sbjct: 131 ALAKELGIPFIESSAKNDDNVNEIFFTLAK 160
Score = 46.3 bits (109), Expect = 2e-06
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ ++VR++ F+ TIG F +++ KVKLQ+
Sbjct: 12 GVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQI 55
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 128 bits (322), Expect = 4e-35
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 116 GVGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKT ++VR+ F + T+G F ++V KVKLQ+WDTAGQERFRS+
Sbjct: 16 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHA 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A+A LL++D+T SF I+ W+ E+ + L ++GNK D R V RE+
Sbjct: 76 YYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDG 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+K G + ETSA ++ F ++K
Sbjct: 136 EKLAKEYGLPFMETSAKTGLNVDLAFTAIAK 166
Score = 37.5 bits (86), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT ++VR+ F + T+G F ++V KVKLQ+
Sbjct: 16 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQM 60
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 128 bits (321), Expect = 1e-34
Identities = 58/175 (33%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++R+ +++ TIG F + + VKLQ+WDTAGQERFR++ Y
Sbjct: 16 GVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ++V+D+T SF +K W++E+ R ++ +VGNK DL+ R V + A
Sbjct: 76 YRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNIT 289
++ + + ETSAL +ED FL +++ + +SQ++L+ ++ + D N+
Sbjct: 136 EFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNVN 190
Score = 47.2 bits (111), Expect = 1e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ +++R+ +++ TIG F + + VKLQ+
Sbjct: 16 GVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 59
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 124 bits (311), Expect = 1e-33
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 15 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 75 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 135 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 167
Score = 45.6 bits (107), Expect = 3e-06
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT +V R+ +F TIG F + + KVKLQ+
Sbjct: 15 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 58
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 119 bits (300), Expect = 3e-32
Identities = 51/150 (34%), Positives = 81/150 (54%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS + RY F+ T+G F I + ++KLQ+WDTAGQER+R++ Y
Sbjct: 15 SVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +L++DIT SF A++ W ++K + + +VGNK D+E R V+ E
Sbjct: 75 YRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ +G ++E SA + ++ F +
Sbjct: 135 QLADHLGFEFFEASAKDNINVKQTFERLVD 164
Score = 39.1 bits (90), Expect = 4e-04
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS + RY F+ T+G F I + ++KLQ+
Sbjct: 15 SVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 58
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 119 bits (298), Expect = 8e-32
Identities = 58/150 (38%), Positives = 91/150 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F+ TIG F T I V +K Q+WDTAGQER+R + Y
Sbjct: 14 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DI ++ ++ ++ W+KEL+ + D +V+ +VGNK+DL R V +EA
Sbjct: 74 YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAR 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ ++ ETSAL +E+ F N+
Sbjct: 134 AFAEKNNLSFIETSALDSTNVEEAFKNILT 163
Score = 37.2 bits (85), Expect = 0.002
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK++++ R+ F+ TIG F T I V +K Q+
Sbjct: 14 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 57
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 118 bits (295), Expect = 2e-31
Identities = 59/150 (39%), Positives = 91/150 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++ ++ K F TIG F T I V K+KLQ+WDTAGQERFR++ Y
Sbjct: 14 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+V+DIT+ ++ + +W+ + + + V+ ++GNK DLE+ R+V EEA
Sbjct: 74 YRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAK 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ G + E SA + +ED FL +K
Sbjct: 134 QFAEENGLLFLEASAKTGENVEDAFLEAAK 163
Score = 36.4 bits (83), Expect = 0.004
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ ++ ++ K F TIG F T I V K+KLQ+
Sbjct: 14 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 57
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 116 bits (290), Expect = 1e-30
Identities = 51/153 (33%), Positives = 86/153 (56%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R+ F ++ TIG F I+V NK KL +WDTAGQERFR++ P Y
Sbjct: 17 GVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +LV+D+T+ +F + W+ EL+ ++ ++ + +REV+R E
Sbjct: 77 YRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGL 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + E SA G++ F + + +I
Sbjct: 137 KFARKHSMLFIEASAKTCDGVQCAFEELVEKII 169
Score = 38.3 bits (88), Expect = 0.001
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+++R+ F ++ TIG F I+V NK KL +
Sbjct: 17 GVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 60
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 112 bits (281), Expect = 1e-29
Identities = 55/152 (36%), Positives = 91/152 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS++ R++ F + TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 10 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 69
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
R++ AA++V+DIT +SF W+ +++ +++ +VGNKTDL R+V+ EE
Sbjct: 70 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 129
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+K + + ETSA ++ +F V+ L
Sbjct: 130 RKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
Score = 33.8 bits (76), Expect = 0.024
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS++ R++ F + TIG F + + + + ++LQL
Sbjct: 10 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQL 53
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 113 bits (283), Expect = 1e-29
Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE----------NKVKLQVWDTAGQ 165
GVGKT+ + RY F+ T+G F ++ KV LQ+WDTAGQ
Sbjct: 15 GVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQ 74
Query: 166 ERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLV-LCVVGNKTDLE 224
ERFRS+ ++R+A LL+FD+T SF ++ W+ +L+ N + ++GNK DL
Sbjct: 75 ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLP 134
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
REVN +A + G Y+ETSA Q +E +
Sbjct: 135 DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 175
Score = 39.9 bits (92), Expect = 3e-04
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQLRTGLKVSKIPVPT 396
GVGKT+ + RY F+ T+G F ++ KV T
Sbjct: 15 GVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDT 71
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 110 bits (276), Expect = 8e-29
Identities = 60/153 (39%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I K F + TIG F + INVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 15 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT ++ A+ W+ + + + +V+ + GNK DL++ REV EA
Sbjct: 75 YRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEAS 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSAL + +E+ F+ ++ ++
Sbjct: 135 RFAQENELMFLETSALTGENVEEAFVQCARKIL 167
Score = 35.7 bits (81), Expect = 0.006
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
G GK+ ++ ++I K F + TIG F + INVG VKLQ+
Sbjct: 15 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI 58
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 108 bits (269), Expect = 7e-28
Identities = 61/160 (38%), Positives = 100/160 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F +N+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 13 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ +V+ ++GNK+DLES R+V REE
Sbjct: 73 YRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGE 132
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +E+ F+N +K + Q+ L
Sbjct: 133 AFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL 172
Score = 36.0 bits (82), Expect = 0.006
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ +++++ K F TIG F +N+ ++KLQ+
Sbjct: 13 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQI 56
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 100 bits (250), Expect = 2e-25
Identities = 64/150 (42%), Positives = 95/150 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 16 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 76 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ + ETSA + ++F+ ++K
Sbjct: 136 SYADDNSLLFMETSAKTSMNVNEIFMAIAK 165
Score = 32.7 bits (73), Expect = 0.062
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F TIGA+F T + + + VK ++
Sbjct: 16 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 59
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 97.3 bits (241), Expect = 3e-24
Identities = 76/153 (49%), Positives = 110/153 (71%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ T+GASF T K+N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 13 CVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 73 YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAE 132
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +Y TSA Q++GIE++FL++ K +I
Sbjct: 133 SYAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 165
Score = 29.1 bits (64), Expect = 0.95
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 340 GVGKTSMVVRYIGKMFSHHISP 361
VGKTS+V+RY F+
Sbjct: 13 CVGKTSLVLRYCENKFNDKHIT 34
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 97.0 bits (240), Expect = 4e-24
Identities = 67/153 (43%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMY
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ R+V RE
Sbjct: 73 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVARE 132
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E ++ G ++ETSA + + DVFL + +
Sbjct: 133 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGE 165
Score = 32.7 bits (73), Expect = 0.068
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIG 364
VGK+S+V+R++ F+ + PTIG
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIG 37
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 96.1 bits (238), Expect = 9e-24
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ V+++ F PTI F+ +I V + L++ DTAG E+F SM +Y
Sbjct: 13 GVGKSALTVQFVTGTFIEKYDPTIED-FYRKEIEVDSSPSVLEILDTAGTEQFASMRDLY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEA 234
+N +LV+ + SF IK ++ R + + +VGNK DLES REV+ E
Sbjct: 72 IKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEG 131
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++ G + ETSA ++++F + +
Sbjct: 132 RALAEEWGCPFMETSAKSKTMVDELFAEIVR 162
Score = 34.5 bits (78), Expect = 0.018
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ V+++ F PTI +
Sbjct: 13 GVGKSALTVQFVTGTFIEKYDPTIEDFYR 41
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 93.9 bits (232), Expect = 5e-23
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ R++ F +I+PTIGASF T + K +WDTAG ERFR++APMY
Sbjct: 14 GVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 74 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 134 DYADSIHAIFVETSAKNAININELFIEISR 163
Score = 31.1 bits (69), Expect = 0.24
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
GVGK+S++ R++ F +I+PTI
Sbjct: 14 GVGKSSIMWRFVEDSFDPNINPTI 37
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 93.1 bits (230), Expect = 2e-22
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKT +++ Y F PT+ ++ + GE L ++DTAGQE + + P+
Sbjct: 13 AVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY-TLGLFDTAGQEDYDRLRPLS 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR---- 231
Y + L+ F + SF +K + +VG + DL
Sbjct: 72 YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAK 131
Query: 232 --------EEAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSKGLI 268
E A ++ + Y E SAL +G+++VF +
Sbjct: 132 NKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177
Score = 38.8 bits (89), Expect = 7e-04
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN 377
VGKT +++ Y F PT+ ++ + GE
Sbjct: 13 AVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP 50
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 90.0 bits (222), Expect = 1e-21
Identities = 47/151 (31%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ ++++ F PT S+ K+ + +V++ + DTAGQE + ++ Y
Sbjct: 14 GVGKSALTLQFMYDEFVEDYEPTKADSYRK-KVVLDGEEVQIDILDTAGQEDYAAIRDNY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEA 234
+R+ L VF IT+ SFAA + +++ R ++ + +VGNK+DLE R+V+ EEA
Sbjct: 73 FRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEA 132
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ + Y ETSA ++ VF ++ +
Sbjct: 133 KNRADQWNVNYVETSAKTRANVDKVFFDLMR 163
Score = 32.6 bits (73), Expect = 0.067
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ ++++ F PT S+
Sbjct: 14 GVGKSALTLQFMYDEFVEDYEPTKADSYR 42
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 90.0 bits (222), Expect = 2e-21
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ RY+ F + TIG F + V + V +Q+WDTAGQERFRS+ +
Sbjct: 16 GVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPF 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP----LVLCVVGNKTDLESSREVNR 231
YR ++ LL F + SF + W KE D ++GNK D+ R+V+
Sbjct: 76 YRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDIS-ERQVST 134
Query: 232 EEAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSKGLI 268
EEA + + G Y+ETSA + F + ++
Sbjct: 135 EEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 172
Score = 33.8 bits (76), Expect = 0.030
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S++ RY+ F + TIG F + V + V +Q+
Sbjct: 16 GVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 59
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 87.8 bits (216), Expect = 7e-21
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ +++I F PTI +T + + + +L + DTAGQE F +M Y
Sbjct: 15 GVGKSALTIQFIQSYFVTDYDPTIED-SYTKQCVIDDRAARLDILDTAGQEEFGAMREQY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLESSREVNREEA 234
R LLVF +T SF I + +++ R D + +GNK DL+ R+V +EE
Sbjct: 74 MRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEG 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++ + TY E SA ++ F + +
Sbjct: 134 QQLARQLKVTYMEASAKIRMNVDQAFHELVR 164
Score = 32.3 bits (72), Expect = 0.080
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ +++I F PTI S+
Sbjct: 15 GVGKSALTIQFIQSYFVTDYDPTIEDSYT 43
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 87.8 bits (216), Expect = 1e-20
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKT +++ Y F PT+ ++ + G+ L +WDTAGQE + + P+
Sbjct: 15 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPV-NLGLWDTAGQEDYDRLRPLS 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE--- 232
Y + +L+ F + SF ++ R+ + +VG K DL ++ +
Sbjct: 74 YPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKE 133
Query: 233 ---------EAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSKGLIC 269
+ +K IG Y E SAL +G++ VF + ++C
Sbjct: 134 KKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 180
Score = 31.5 bits (70), Expect = 0.16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
VGKT +++ Y F PT+
Sbjct: 15 AVGKTCLLISYTTNAFPGEYIPTV 38
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 87.4 bits (215), Expect = 1e-20
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERF-RSMAPM 174
VGKT + R+ F TIG F +++ ++K+Q+WDTAGQERF +SM
Sbjct: 12 NVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQH 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREE 233
YYRN +A + V+D+T SF ++ W++E K+++ + +VGNK DL S+ +V +
Sbjct: 72 YYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDL 131
Query: 234 AFHYSKSIGGTYYETSALQDQ---GIEDVFLNV 263
A ++ + +ETSA +E +F+ +
Sbjct: 132 AQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
Score = 36.9 bits (84), Expect = 0.002
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKT + R+ F TIG F +++ ++K+QL
Sbjct: 12 NVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 55
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 85.8 bits (211), Expect = 5e-20
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKT +++ Y F PT+ + + VG + L ++DTAGQE + + P+
Sbjct: 19 AVGKTCLLMSYANDAFPEEYVPTVFD-HYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLS 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSRE------- 228
Y + L+ F + SF +K + + ++G + DL +
Sbjct: 78 YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLND 137
Query: 229 -----VNREEAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSK 265
+ E+ +K IG Y E SAL +G++ VF
Sbjct: 138 MKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180
Score = 34.2 bits (77), Expect = 0.024
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN 377
VGKT +++ Y F PT+ + + G+
Sbjct: 19 AVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQ 56
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 84.3 bits (207), Expect = 1e-19
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ ++ I F PTI S+ + GE L + DTAGQE + +M Y
Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETC-LLDILDTAGQEEYSAMRDQY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
R L VF I SF I + +++KR D V V+ ++R V +A
Sbjct: 72 MRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQ 131
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++S G Y ETSA QG+ED F + +
Sbjct: 132 DLARSYGIPYIETSAKTRQGVEDAFYTLVR 161
Score = 33.4 bits (75), Expect = 0.032
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ ++ I F PTI S+
Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTIEDSYR 41
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 83.9 bits (206), Expect = 2e-19
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT +++ F PT+ + A I V +V+L +WDTAG E + + P+
Sbjct: 12 ACGKTCLLIVNSKDQFPEVYVPTVFE-NYVADIEVDGKQVELALWDTAGLEDYDRLRPLS 70
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR---- 231
Y + + L+ F I S I ++ + + +VGNK DL + R
Sbjct: 71 YPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAK 130
Query: 232 --------EEAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSK 265
EE + IG Y E SA G+ +VF ++
Sbjct: 131 MKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 173
Score = 37.3 bits (85), Expect = 0.002
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GKT +++ F PT+ ++
Sbjct: 12 ACGKTCLLIVNSKDQFPEVYVPTVFENYV 40
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 83.5 bits (205), Expect = 2e-19
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ V+++ +F PTI + ++ V + L++ DTAG E+F +M +Y
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIED-SYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLESSREVNREEA 234
+N LV+ IT +F ++ +++ R D V + VGNK DLE R V +E+
Sbjct: 72 MKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQG 131
Query: 235 FHYSKSIGG-TYYETSALQDQGIEDVFLNVSK 265
+ ++ + E+SA + ++F ++ +
Sbjct: 132 QNLARQWCNCAFLESSAKSKINVNEIFYDLVR 163
Score = 34.6 bits (78), Expect = 0.017
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ V+++ +F PTI S+
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIEDSYR 41
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 82.7 bits (203), Expect = 6e-19
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GKT+++ R PTIG + T + +KL VWD GQ R Y
Sbjct: 27 GAGKTTILYRLQIGEVVTTK-PTIGFNVET----LSYKNLKLNVWDLGGQTSIRPYWRCY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLE---SSREVNR 231
Y + A + V D T + + + + + + NK D S+ EV++
Sbjct: 82 YADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSK 141
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
E K + +SA++ +GI +
Sbjct: 142 ELNLVELKDRSWSIVASSAIKGEGITEGL 170
Score = 28.4 bits (62), Expect = 2.1
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
G GKT+++ R PTIG + T + +KL +
Sbjct: 27 GAGKTTILYRLQIGEVVTTK-PTIGFNVET----LSYKNLKLNV 65
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 82.4 bits (202), Expect = 7e-19
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ + F + PT+ +TA + +++L +WDT+G + ++ P+
Sbjct: 12 QCGKTALLHVFAKDCFPENYVPTVFE-NYTASFEIDTQRIELSLWDTSGSPYYDNVRPLS 70
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS--------- 226
Y +++A L+ FDI++ + ++ K + + +VG K+DL +
Sbjct: 71 YPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSN 130
Query: 227 ---REVNREEAFHYSKSIGG-TYYETSALQDQ-GIEDVF 260
V+ ++ + +K IG TY E SALQ + + D+F
Sbjct: 131 HRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 169
Score = 34.6 bits (78), Expect = 0.017
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GKT+++ + F + PT+ ++
Sbjct: 12 QCGKTALLHVFAKDCFPENYVPTVFENYT 40
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 82.1 bits (201), Expect = 7e-19
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+SM+ RY +F+ TIG F +I V + V+L +WDTAGQE F ++ Y
Sbjct: 12 AVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A +LVF T SF AI +W +++ V + +V NK DL + EEA
Sbjct: 72 YRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPT-ALVQNKIDLLDDSCIKNEEAE 130
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+K + +Y TS +D + +VF +++
Sbjct: 131 GLAKRLKLRFYRTSVKEDLNVSEVFKYLAE 160
Score = 31.2 bits (69), Expect = 0.20
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQ 382
VGK+SM+ RY +F+ TIG F +I V + V+L
Sbjct: 12 AVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLM 54
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 81.3 bits (199), Expect = 2e-18
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 7/157 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++ RY+ +S TIGA F T ++ V G+ +QVWDTAGQERF+S+
Sbjct: 12 GVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVA 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTW----VKELKRNVDEPLVLCVVGNKTDLESSREVN 230
+YR A+ +LV+D+T SF IK+W + N E ++GNK D E S+++
Sbjct: 72 FYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 131
Query: 231 REEAF-HYSKSIGG-TYYETSALQDQGIEDVFLNVSK 265
E++ +KS+G + TSA ++ F +++
Sbjct: 132 SEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIAR 168
Score = 33.5 bits (75), Expect = 0.040
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV 379
GVGKTS++ RY+ +S TIGA F T ++ V +KV
Sbjct: 12 GVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKV 51
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 81.3 bits (199), Expect = 2e-18
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ +Y+ K FS+ TIGA F T ++ V + V +Q+WDTAGQERF+S+ +
Sbjct: 12 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAF 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD----EPLVLCVVGNKTDLESSREVNR 231
YR A+ +LVFD+T ++F + +W E E V+GNK DLE+ + +
Sbjct: 72 YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATK 131
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ETSA + +E F +++ +
Sbjct: 132 RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ +Y+ K FS+ TIGA F T ++ V + V +Q+
Sbjct: 12 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 55
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 80.5 bits (197), Expect = 3e-18
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ +++I F PTI +T +V +L + DTAGQE F +M Y
Sbjct: 16 GVGKSALTIQFIQSYFVSDYDPTIED-SYTKICSVDGIPARLDILDTAGQEEFGAMREQY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLESSREVNREEA 234
R + LLVF I SF + ++ R D V VGNK DLES R+V R EA
Sbjct: 75 MRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ S Y+E SA +++ F + +
Sbjct: 135 SAFGASHHVAYFEASAKLRLNVDEAFEQLVR 165
Score = 29.6 bits (65), Expect = 0.75
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQLRT 385
GVGK+++ +++I F PTI S+ G L T
Sbjct: 16 GVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDT 61
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 80.1 bits (196), Expect = 3e-18
Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ + T + V + VWD GQ++ R + Y
Sbjct: 10 AAGKTTILYKLKLGEIV-----TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY 64
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVV----GNKTDLESSREVNR 231
++N + V D + + + + + +V + + ++ E+
Sbjct: 65 FQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD 124
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ H + T A G+ +
Sbjct: 125 KLGLHSLRHRNWYIQATCATSGDGLYEGL 153
Score = 29.6 bits (65), Expect = 0.62
Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 5/43 (11%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQ 382
GKT+++ + T + V +
Sbjct: 10 AAGKTTILYKLKLGEIV-----TTIPTIGFNVETVEYKNISFT 47
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 78.8 bits (193), Expect = 1e-17
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ + I PT+G + T VK VWD GQ++ R + Y
Sbjct: 22 AAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYK----NVKFNVWDVGGQDKIRPLWRHY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLV-LCVVGNKTDLE---SSREVNR 231
Y + V D + + + + + + + NK DL E+
Sbjct: 77 YTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 136
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ + + A G+ +
Sbjct: 137 KLGLTRIRDRNWYVQPSCATSGDGLYEGL 165
Score = 26.5 bits (57), Expect = 8.5
Identities = 4/23 (17%), Positives = 8/23 (34%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPT 362
GKT+++ + I
Sbjct: 22 AAGKTTILYKLKLGQSVTTIPTV 44
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 77.4 bits (189), Expect = 3e-17
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ +++ K+F PTI S+ + L V DTAGQE F +M Y
Sbjct: 14 GVGKSALTIQFFQKIFVPDYDPTIEDSYLK-HTEIDNQWAILDVLDTAGQEEFSAMREQY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPL-VLCVVGNKTDLESSREVNREEA 234
R + L+V+ +T SF + + + + R D + +V NK DL R+V R++
Sbjct: 73 MRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQG 132
Query: 235 FHYSKSIGGTYYETSAL-QDQGIEDVFLNVSK 265
+ Y ETSA ++ F ++ +
Sbjct: 133 KEMATKYNIPYIETSAKDPPLNVDKTFHDLVR 164
Score = 31.2 bits (69), Expect = 0.23
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GVGK+++ +++ K+F PTI S+
Sbjct: 14 GVGKSALTIQFFQKIFVPDYDPTIEDSYL 42
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 76.2 bits (186), Expect = 9e-17
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F PT+ ++ LQ+ DT G +F +M +
Sbjct: 12 GVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSIC-TLQITDTTGSHQFPAMQRLS 70
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD--EPLVLCVVGNKTDLESSREVNREE 233
+A +LV+ IT S +K +++ E + + +VGNK D SREV E
Sbjct: 71 ISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSE 130
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
A +++ + ETSA + ++++F +
Sbjct: 131 AEALARTWKCAFMETSAKLNHNVKELFQEL 160
Score = 33.8 bits (76), Expect = 0.031
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
GVGK+S+V+R++ F PT+
Sbjct: 12 GVGKSSLVLRFVKGTFRESYIPTV 35
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 75.0 bits (183), Expect = 2e-16
Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ ++ H + + N + +WD GQE RS Y
Sbjct: 25 NAGKTTILYQFSMNEVVHTSPT-----IGSNVEEIVINNTRFLMWDIGGQESLRSSWNTY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLE---SSREVNR 231
Y N ++V D T + + + ++ + D + NK D++ + E+++
Sbjct: 80 YTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQ 139
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
K AL +G+
Sbjct: 140 FLKLTSIKDHQWHIQACCALTGEGLCQGL 168
Score = 26.9 bits (58), Expect = 5.4
Identities = 5/35 (14%), Positives = 10/35 (28%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV 374
GKT+++ ++ H N
Sbjct: 25 NAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNT 59
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 73.1 bits (178), Expect = 9e-16
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GKT+ V R++ F T+G + +K VWDTAGQE+F + Y
Sbjct: 13 GTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
Y A A+++FD+T ++ + W ++L R + + + GNK D++ + + F
Sbjct: 73 YIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENI-PIVLCGNKVDIKDRKVKAKSIVF 131
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLH 276
H K++ YY+ SA + E FL +++ L + +L
Sbjct: 132 HRKKNLQ--YYDISAKSNYNFEKPFLWLARKL--IGDPNLE 168
Score = 32.3 bits (72), Expect = 0.077
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFT 369
G GKT+ V R++ F T+G
Sbjct: 13 GTGKTTFVKRHLTGEFEKKYVATLGVEVHP 42
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 72.4 bits (176), Expect = 2e-15
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++VVR++ K F PT+ +++ + + + V +++ DTAGQE +
Sbjct: 12 GVGKSALVVRFLTKRFIWEYDPTLESTYRH-QATIDDEVVSMEILDTAGQEDTIQR-EGH 69
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEA 234
R +LV+DIT SF + L + L +VGNK DL+ SR+V+ EE
Sbjct: 70 MRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEG 129
Query: 235 FHYSKSIGGTYYETSALQDQG-IEDVFLNVSK 265
+ + +YE SA +G I ++F + +
Sbjct: 130 EKLATELACAFYECSACTGEGNITEIFYELCR 161
Score = 34.6 bits (78), Expect = 0.016
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
GVGK+++VVR++ K F PT+
Sbjct: 12 GVGKSALVVRFLTKRFIWEYDPTL 35
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 69.4 bits (168), Expect = 2e-14
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+ ++++ F PTI +F I V + LQ+ DTAGQ+ + Y
Sbjct: 14 SVGKSSLTIQFVEGQFVDSYDPTIENTFTK-LITVNGQEYHLQLVDTAGQDEYSIFPQTY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWV-KELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
+ N +LV+ +T SF IK K L + + +VGNK DL R ++ EE
Sbjct: 73 SIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEG 132
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
++S + E+SA ++Q DVF
Sbjct: 133 KALAESWNAAFLESSAKENQTAVDVF 158
Score = 31.2 bits (69), Expect = 0.17
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
VGK+S+ ++++ F PTI
Sbjct: 14 SVGKSSLTIQFVEGQFVDSYDPTI 37
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 66.9 bits (162), Expect = 1e-13
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ + + SH +PT G + + + KL VWD GQ + R Y
Sbjct: 26 NAGKTTLLKQLASEDISHI-TPTQGFNIKSVQSQ----GFKLNVWDIGGQRKIRPYWRSY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLESSR---EVNR 231
+ N + + V D F + EL + + + NK DL ++ E+
Sbjct: 81 FENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAE 140
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
H + SAL +G++D
Sbjct: 141 GLNLHTIRDRVWQIQSCSALTGEGVQDGM 169
Score = 26.5 bits (57), Expect = 7.6
Identities = 5/23 (21%), Positives = 10/23 (43%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPT 362
GKT+++ + + SH
Sbjct: 26 NAGKTTLLKQLASEDISHITPTQ 48
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 66.3 bits (160), Expect = 2e-13
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++ + G + I V + L V+D Q+ R +
Sbjct: 11 GVGKSALARIFGGVEDGPEA--EAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHC 68
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV-VGNKTDLESSREVNREEA 234
+A ++V+ +T SF +L+R V + VGNK+DL SREV+ +E
Sbjct: 69 MAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEG 128
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ + ETSA ++ +F V +
Sbjct: 129 RACAVVFDCKFIETSAALHHNVQALFEGVVR 159
Score = 28.9 bits (63), Expect = 1.0
Identities = 5/30 (16%), Positives = 10/30 (33%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFT 369
GVGK+++ + G +
Sbjct: 11 GVGKSALARIFGGVEDGPEAEAAGHTYDRS 40
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 65.5 bits (158), Expect = 4e-13
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 8/149 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+ V F+ + PT+G + + + V +++WD GQ RFRSM Y
Sbjct: 12 YSGKTTFVNVIASGQFNEDMIPTVGFNMR----KITKGNVTIKLWDIGGQPRFRSMWERY 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLESS---REVNR 231
R +A + + D A K + L + + + V+GNK DL + +E+
Sbjct: 68 CRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIE 127
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ + Y S + I+
Sbjct: 128 KMNLSAIQDREICCYSISCKEKDNIDITL 156
Score = 31.2 bits (69), Expect = 0.20
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFF 368
GKT+ V F+ + PT+G +
Sbjct: 12 YSGKTTFVNVIASGQFNEDMIPTVGFNMR 40
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 65.1 bits (157), Expect = 5e-13
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 9/149 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ ++ G+ TI + + KL +WD GQ+ RS Y
Sbjct: 12 NAGKTTILKKFNGEDVD-----TISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNY 66
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVN---R 231
+ + + + V D + ++ L L + NK DL + N
Sbjct: 67 FESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQE 126
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+S SA+ + +
Sbjct: 127 ALELDSIRSHHWRIQGCSAVTGEDLLPGI 155
Score = 27.3 bits (59), Expect = 4.0
Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
GKT+++ ++ G+ ISPT+
Sbjct: 12 NAGKTTILKKFNGEDVD-TISPTL 34
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 62.4 bits (150), Expect = 4e-12
Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 9/154 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GKT+++ R T + V +K QVWD G R Y
Sbjct: 15 GAGKTTILYRLQVGEVV-----TTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCY 69
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLE---SSREVNR 231
Y N +A + V D K+ + + + +L V NK D+E +S E+
Sbjct: 70 YSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMAN 129
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
K ++TSA + G+++ + +
Sbjct: 130 SLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVE 163
Score = 27.0 bits (58), Expect = 5.5
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 340 GVGKTSMVVRYIGKMFSHHI 359
G GKT+++ R I
Sbjct: 15 GAGKTTILYRLQVGEVVTTI 34
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 62.4 bits (150), Expect = 5e-12
Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 16/156 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ + T+ ++ + +K +D G + R + Y
Sbjct: 10 NAGKTTLLHMLKNDRLA-----TLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDY 64
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNR--- 231
+ N + + D F + + L + + ++GNK D ++
Sbjct: 65 FPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRS 124
Query: 232 -------EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ + S + G + F
Sbjct: 125 ALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAF 160
Score = 29.3 bits (64), Expect = 0.77
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKIN 373
GKT+++ + + PT + I
Sbjct: 10 NAGKTTLLHMLKNDRLA-TLQPTWHPTSEELAIG 42
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 61.9 bits (149), Expect = 8e-12
Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 13/165 (7%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK+S++ R++ + + + ++ V + + + + +
Sbjct: 15 RSGKSSLIHRFLTGSYQVL--EKTESEQYKKEMLVDGQTHLVLIRE-----EAGAPDAKF 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKR-----NVDEPLVLCVVGNKTDLESSREVN 230
A+A + VF + +SF A+ +L L L ++ S R V
Sbjct: 68 SGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVG 127
Query: 231 REEAFHYSKSIGG-TYYETSALQDQGIEDVFLNVSKGLICLSQES 274
A + +YYET A ++ VF V++ ++ L ++
Sbjct: 128 DARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQ 172
Score = 30.7 bits (68), Expect = 0.30
Identities = 5/44 (11%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GK+S++ R++ + + + ++ V + +
Sbjct: 15 RSGKSSLIHRFLTGSYQVL--EKTESEQYKKEMLVDGQTHLVLI 56
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 58.6 bits (141), Expect = 3e-10
Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 20/162 (12%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK+++V + H+ T G F K V KV ++D GQ R
Sbjct: 16 ESGKSTIVKQM----RILHVVLTSG--IFETKFQVD--KVNFHMFDVGGQRDERRKWIQC 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-----------PLVLCVVGNKTDLE 224
+ + A + V + Y+ L+ ++ + + + NK DL
Sbjct: 68 FNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLL 127
Query: 225 SSREVNREEAF-HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ + + + Y A + G +
Sbjct: 128 AEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKY 169
Score = 30.9 bits (69), Expect = 0.36
Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 13/116 (11%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQLRTGLKVSKIPVPTRNR 399
GK+++V + H+ T G F K V KV +
Sbjct: 16 ESGKSTIVKQM----RILHVVLTSG--IFETKFQVD--KVNFHMFDVGGQRDERRKWIQC 67
Query: 400 EGATTGR-----ITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNA 450
T + + + + + NR+ +S L ++ N
Sbjct: 68 FNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNK 123
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 57.6 bits (138), Expect = 3e-10
Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 43/190 (22%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK++ + + S PT G + V ++ D GQ R
Sbjct: 12 ESGKSTFIKQMRIIHGSG--VPTTGIIEYP----FDLQSVIFRMVDVGGQRSERRKWIHC 65
Query: 176 YRNANAALLVFDITQY-----------HSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE 224
+ N + + + +++Y + + + + + + NK DL
Sbjct: 66 FENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLL 125
Query: 225 SSREVNREEAFHYSKSIGGT--------------------------YYETSALQDQGIED 258
+ + ++ + G + T A + I
Sbjct: 126 EEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRF 185
Query: 259 VFLNVSKGLI 268
VF V ++
Sbjct: 186 VFAAVKDTIL 195
Score = 32.2 bits (72), Expect = 0.10
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFT 369
GK++ + + S PT G +
Sbjct: 12 ESGKSTFIKQMRIIHGSG--VPTTGIIEYP 39
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 57.2 bits (137), Expect = 5e-10
Identities = 23/184 (12%), Positives = 57/184 (30%), Gaps = 23/184 (12%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK++ + + H PT G + V ++ D GQ R
Sbjct: 12 ESGKSTFLKQM---RIIHGQDPTKGIHEYD----FEIKNVPFKMVDVGGQRSERKRWFEC 64
Query: 176 YRNANAALLVFDITQYHSFAAIKTWV-------KELKRNVDEPL----VLCVVGNKTDLE 224
+ + + L + +++ + V+ + + + NKTDL
Sbjct: 65 FDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLL 124
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
+ ++ + G + + + + F + T+++ +
Sbjct: 125 EEKVQVVSIKDYFLEFEGDPHCLRDVQKF--LVECFRGKRRDQQQRPLYHHFTTAI---N 179
Query: 285 SDNI 288
++NI
Sbjct: 180 TENI 183
Score = 32.2 bits (72), Expect = 0.13
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFT 369
GK++ + + H PT G +
Sbjct: 12 ESGKSTFLKQM---RIIHGQDPTKGIHEYD 38
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 56.3 bits (134), Expect = 7e-10
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSH-HISPTIGASFFTAKINVGENKVKLQVWDTA-GQERFRSMAP 173
GVGK+++ + G S +G + + V + + D + +
Sbjct: 13 GVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHD 72
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNRE 232
+ +A L+V+ IT SF +L+R + + +VGNK+DL REV+
Sbjct: 73 HCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVS 132
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E + + ETSA ++++F + +
Sbjct: 133 EGRACAVVFDCKFIETSAAVQHNVKELFEGIVR 165
Score = 27.8 bits (60), Expect = 3.0
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTI 363
GVGK+++ + G S +
Sbjct: 13 GVGKSTLANIFAGVHDSMDSDCEV 36
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 55.0 bits (131), Expect = 3e-09
Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT + VR + + +I S K+N + + + +
Sbjct: 10 DSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRF 68
Query: 176 YRNANAALLVFDITQYHSF----AAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR 231
+A A + V D + A V + L + NK D+ ++
Sbjct: 69 KSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKL 128
Score = 30.8 bits (68), Expect = 0.36
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKIN 373
GKT + VR + + +I S K+N
Sbjct: 10 DSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVN 42
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 52.4 bits (124), Expect = 2e-08
Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 21/161 (13%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKT+++ H+ + + +D G + R + Y
Sbjct: 23 NAGKTTLLHMLKDDRLGQHVPT-----LHPTSEELTIAGMTFTTFDLGGHIQARRVWKNY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVV-GNKTDLESSREVNR--- 231
N + + D + K + L + V ++ GNK D + R
Sbjct: 78 LPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLRE 137
Query: 232 ------------EEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ + + S L+ QG + F
Sbjct: 138 MFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGF 178
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 51.5 bits (122), Expect = 4e-08
Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 46/190 (24%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK+++V + G + + +++D GQ R
Sbjct: 12 ESGKSTIVKQMKIIHE-----AGTGIVE----THFTFKDLHFKMFDVGGQRSERKKWIHC 62
Query: 176 YRNANAALLVFDITQYHSFAAIKT-----------WVKELKRNVDEPLVLCVVGNKTDLE 224
+ A + ++ Y A + + + NK DL
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLF 122
Query: 225 SSREVNREEAFHYSKSIGGT--------------------------YYETSALQDQGIED 258
+ Y + G + T A + ++
Sbjct: 123 EEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQF 182
Query: 259 VFLNVSKGLI 268
VF V+ +I
Sbjct: 183 VFDAVTDVII 192
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 39.6 bits (91), Expect = 5e-04
Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 23/162 (14%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GKTS++ + S + + + D G + R Y
Sbjct: 13 NSGKTSLLTLLTTDSVRPTVVSQEPLSAAD------YDGSGVTLVDFPGHVKLRYKLSDY 66
Query: 176 Y-----RNANAALLVFDITQYHSFAAIKTWVKELKRNVDE----PLVLCVVGNKTDLESS 226
+V ++ ++ + + + + NK++L ++
Sbjct: 67 LKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTA 126
Query: 227 REVNRE--------EAFHYSKSIGGTYYETSALQDQGIEDVF 260
R ++ + + E ++ E+
Sbjct: 127 RPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTL 168
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 34.7 bits (78), Expect = 0.013
Identities = 18/145 (12%), Positives = 43/145 (29%), Gaps = 1/145 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GK+S++ G+ + ++ G + + ++ + + L + DTAG
Sbjct: 11 NAGKSSLLNALAGREAAI-VTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERI 69
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
+ T + E + + ++ E
Sbjct: 70 GIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETL 129
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
S+ G SA +G++ +
Sbjct: 130 GMSEVNGHALIRLSARTGEGVDVLR 154
>d2fwka1 b.38.1.1 (A:24-115) U6 snRNA-associated sm-like protein
LSM5 {Cryptosporidium parvum [TaxId: 5807]}
Length = 92
Score = 31.4 bits (71), Expect = 0.055
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 456 ITLHIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQ 501
I IG+++ V K+F G L+ F + +V+ + + +
Sbjct: 10 IDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADE 55
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 32.4 bits (73), Expect = 0.14
Identities = 30/205 (14%), Positives = 58/205 (28%), Gaps = 32/205 (15%)
Query: 33 KEQLRRKQKEGKIQTSSLTEVSVNLPKLNYQKNN-KNKKKTLIPYLEMLVSNKIKVGLLS 91
++ KI +++ +NL +L + N + + L+ + S+ + V
Sbjct: 8 TGYFKKFNTGRKI----ISQEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVA--- 60
Query: 92 DKFVVGLSINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 151
V G + G GK+S + G + G T + +
Sbjct: 61 ---VTGET----------------GSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPY 101
Query: 152 --ENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDIT-QYHSFAAIKTWVKELKRNV 208
N + WD G Y F I F + + +
Sbjct: 102 KHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMM 161
Query: 209 DEPLVLCVVGNKTDLESSREVNREE 233
+ K D + + E + E
Sbjct: 162 KKEFYFVR--TKVDSDITNEADGEP 184
>d1d3bb_ b.38.1.1 (B:) B core SNRNP protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 81
Score = 29.8 bits (67), Expect = 0.21
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 459 HIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKL-- 516
HI ++ G+ F G K F K L++ + P+ + ++ L
Sbjct: 6 HIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVL 65
Query: 517 ---DDIVRIEA 524
+++V +
Sbjct: 66 LRGENLVSMTV 76
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.1 bits (66), Expect = 0.53
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK++++ +G + ISP + + + E + ++ DT G + +
Sbjct: 15 NVGKSTLLNNLLGVKVAP-ISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEF 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNV------DEPLVLCVVGNKTDLESSREV 229
L E + + + +VGNK D E
Sbjct: 74 MDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEE 133
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVF 260
+ ++ SAL ++ + ++
Sbjct: 134 AMKA--YHELLPEAEPRMLSALDERQVAELK 162
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.1 bits (66), Expect = 0.59
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 8/157 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERF------RS 170
VGK++++ + +G+ S S + E + DT G R
Sbjct: 16 VGKSTLLNKLLGQKISI-TSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRL 74
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN 230
M + LV + + + V R P++ V +++ ++
Sbjct: 75 MNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVI-LAVNKVDNVQEKADLL 133
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
F S+ SA ++ + V K L
Sbjct: 134 PHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHL 170
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 188
Score = 29.6 bits (66), Expect = 0.76
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 423 VATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFEGYLKTFS 482
G PV S GG L + P+ Y + L I ++ G +K F
Sbjct: 35 ATPDGMPVTSMGG---LKVTPDTSYDALDPVDIDALVIPGGLSWEKGTAADLGGLVKRFR 91
Query: 483 KQFELVISMTH 493
+ LV +
Sbjct: 92 DRDRLVAGICA 102
>d1h641_ b.38.1.1 (1:) Archaeal homoheptameric Sm protein {Archaeon
Pyrococcus abyssi [TaxId: 29292]}
Length = 71
Score = 25.8 bits (57), Expect = 3.6
Identities = 9/54 (16%), Positives = 17/54 (31%)
Query: 456 ITLHIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQCIDPNTVV 509
I + V V G +F G L + +V++ + V+
Sbjct: 7 IHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVLADAEMIQDGEVVKRYGKIVI 60
>d1rdsa_ d.1.1.4 (A:) RNase Ms {Molsin (Aspergillus saitoi) [TaxId:
5063]}
Length = 105
Score = 26.3 bits (58), Expect = 4.5
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 13/88 (14%)
Query: 364 GASFFTAKINVGENKVKLQLRTGLKVSKIPVPTRNREG---ATTGRITEPDTMNNNNKKK 420
++++ ++ + K +G + P + EG +G E M++
Sbjct: 9 STCYWSSDVSAAKAKGYSLYESGDTIDDYPHEYHDYEGFDFPVSGTYYEYPIMSDY---- 64
Query: 421 NRVATTGRPVRSRGGPDRLAINPEGVYC 448
V T G P G DR+ N +
Sbjct: 65 -DVYTGGSP-----GADRVIFNGDDELA 86
>d1mgqa_ b.38.1.1 (A:) Archaeal homoheptameric Sm protein {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 74
Score = 25.4 bits (56), Expect = 5.6
Identities = 9/49 (18%), Positives = 21/49 (42%)
Query: 453 MQAITLHIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQ 501
+ A+ + V + ++F G LK+F LV++ +++
Sbjct: 8 LDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVT 56
>d1i4k1_ b.38.1.1 (1:) Archaeal homoheptameric Sm protein {Archaeon
Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]}
Length = 72
Score = 25.4 bits (56), Expect = 5.6
Identities = 9/54 (16%), Positives = 19/54 (35%)
Query: 456 ITLHIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQCIDPNTVV 509
+ + V V G++F G L + LV+ ++ + V+
Sbjct: 8 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNGEVVRKVGSVVI 61
>d1y5ia1 b.52.2.2 (A:1075-1244) Respiratory nitrate reductase 1
alpha chain {Escherichia coli [TaxId: 562]}
Length = 170
Score = 26.9 bits (59), Expect = 6.0
Identities = 5/35 (14%), Positives = 13/35 (37%)
Query: 438 RLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGK 472
L V+ + + + + D + V+ +G
Sbjct: 35 TLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGA 69
>d1y7ba1 b.29.1.23 (A:325-534) Beta-D-xylosidase C-terminal domain
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 210
Score = 27.0 bits (59), Expect = 6.3
Identities = 11/81 (13%), Positives = 21/81 (25%), Gaps = 9/81 (11%)
Query: 304 SLDTPPLTEAETAKFVVGLSINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHISPTI 363
S+ P T + A + NW + V R I + + +
Sbjct: 71 SVSFSPDTFQQAAGLTCYYN---------TENWSTIQVTWNEDKGRVIDIVCCDNFHFDM 121
Query: 364 GASFFTAKINVGENKVKLQLR 384
I + L++
Sbjct: 122 PLKSNVIPIPKDVEYIHLKVE 142
Score = 26.6 bits (58), Expect = 7.3
Identities = 8/60 (13%), Positives = 16/60 (26%)
Query: 109 EANWFWLGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERF 168
NW + V R I + + + I + L+V ++
Sbjct: 91 TENWSTIQVTWNEDKGRVIDIVCCDNFHFDMPLKSNVIPIPKDVEYIHLKVEVRVETYQY 150
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.392
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,211,399
Number of extensions: 101777
Number of successful extensions: 412
Number of sequences better than 10.0: 1
Number of HSP's gapped: 363
Number of HSP's successfully gapped: 131
Length of query: 617
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 526
Effective length of database: 1,158,166
Effective search space: 609195316
Effective search space used: 609195316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.0 bits)