BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy303
         (62 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
           Est2 Complexed With Hexadecanesulfonate
 pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
          Length = 310

 Score = 27.7 bits (60), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 14  IQLEIENFNILLHGFGSKYKV 34
           +++EIENF  L+HGF   Y +
Sbjct: 270 VKVEIENFEDLIHGFAQFYSL 290


>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
           Est2 From Alicyclobacillus Acidocaldarius
          Length = 310

 Score = 27.7 bits (60), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 14  IQLEIENFNILLHGFGSKYKV 34
           +++EIENF  L+HGF   Y +
Sbjct: 270 VKVEIENFEDLIHGFAQFYSL 290


>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
          Length = 310

 Score = 27.7 bits (60), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 14  IQLEIENFNILLHGFGSKYKV 34
           +++EIENF  L+HGF   Y +
Sbjct: 270 VKVEIENFEDLIHGFAQFYSL 290


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.143    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,763,277
Number of Sequences: 62578
Number of extensions: 55044
Number of successful extensions: 125
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122
Number of HSP's gapped (non-prelim): 3
length of query: 62
length of database: 14,973,337
effective HSP length: 33
effective length of query: 29
effective length of database: 12,908,263
effective search space: 374339627
effective search space used: 374339627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)