BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3030
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25162|ACH4_DROME Acetylcholine receptor subunit beta-like 2 OS=Drosophila
melanogaster GN=nAcRbeta-96A PE=2 SV=3
Length = 519
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 73/89 (82%)
Query: 13 ADADNVIPRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAA 72
D+DNVIPR LTPE+L A VRFIAQHIKDADKDNEIVEDWK+VSMVLDRFFL +FT +
Sbjct: 412 VDSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLS 471
Query: 73 CVLGTCGIIFQAPSLYDNTAPIDIQMTRI 101
CV GT II Q+PSLYD +PID Q++ I
Sbjct: 472 CVFGTLAIICQSPSLYDTRSPIDRQLSEI 500
>sp|P09478|ACH1_DROME Acetylcholine receptor subunit alpha-like 1 OS=Drosophila
melanogaster GN=nAcRalpha-96Aa PE=2 SV=2
Length = 567
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%)
Query: 26 EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAP 85
E+ EG RFIAQH+K+ DK + EDWKYV+MVLDR FL +F ACV+GT II QAP
Sbjct: 476 EMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAP 535
Query: 86 SLYDNTAPIDIQMTRITQ 103
SLYD + PIDI ++I +
Sbjct: 536 SLYDQSQPIDILYSKIAK 553
>sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like OS=Manduca sexta GN=ARA1
PE=2 SV=1
Length = 516
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 25 PEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQA 84
PE+ A +G+ +IA + ++ + EDWKYV+MVLDR FL +FT A V+G+ GII QA
Sbjct: 427 PELHKAIDGINYIADQTRKEEESTRVKEDWKYVAMVLDRPFLWIFTLAVVVGSAGIILQA 486
Query: 85 PSLYDNTAPIDIQMTRI 101
P+LYD APID++++ I
Sbjct: 487 PTLYDERAPIDVRLSEI 503
>sp|Q9N587|ACH6_CAEEL Acetylcholine receptor subunit alpha-type unc-63 OS=Caenorhabditis
elegans GN=unc-63 PE=1 SV=2
Length = 502
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 9 HASLADADNVIPRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCV 68
+++ ++ +PR +P + SA E V +IA H+K+ + D +++EDWKY+S+V+DR FL
Sbjct: 417 NSNREESSFTLPRDNSP-VRSAVESVAYIADHLKNEEDDKQVIEDWKYISVVMDRIFLIT 475
Query: 69 FTAACVLGTCGIIFQAPSLYDNT 91
FT AC GT II +APS+YDNT
Sbjct: 476 FTFACAFGTVVIIARAPSIYDNT 498
>sp|P54247|ACHX_ONCVO Acetylcholine receptor non-alpha chain (Fragment) OS=Onchocerca
volvulus PE=2 SV=1
Length = 436
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 24 TPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
+P ++ AFE V FIAQ +K D++ I EDWK+V+ VLDR FL +F+ AC LGT I+FQ
Sbjct: 365 SPHVIKAFENVCFIAQLLKKKDREAMIDEDWKFVARVLDRLFLLLFSIACFLGTILILFQ 424
Query: 84 APSLYDNTAPID 95
APSLYD I+
Sbjct: 425 APSLYDTRQAIN 436
>sp|P26153|ACHB4_CHICK Neuronal acetylcholine receptor subunit beta-4 (Fragment) OS=Gallus
gallus GN=CHRNB4 PE=2 SV=1
Length = 470
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 22 QLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGII 81
+ +PE+ A +GV FIA+H+K D D ++EDWKYV+MV+DR FL +F CVLGT G+
Sbjct: 397 KFSPEVQEAIDGVSFIAEHMKSDDNDQSVIEDWKYVAMVVDRLFLWIFVLVCVLGTVGLF 456
Query: 82 FQ 83
Q
Sbjct: 457 LQ 458
>sp|P30926|ACHB4_HUMAN Neuronal acetylcholine receptor subunit beta-4 OS=Homo sapiens
GN=CHRNB4 PE=1 SV=2
Length = 498
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 26 EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAP 85
++ A EGV FIAQH+K+ D+D +VEDWKYV+MV+DR FL VF CVLGT G+ P
Sbjct: 423 DVQEALEGVSFIAQHMKNDDEDQSVVEDWKYVAMVVDRLFLWVFMFVCVLGTVGLFL--P 480
Query: 86 SLYDNTA 92
L+ A
Sbjct: 481 PLFQTHA 487
>sp|Q8SPU6|ACHB4_BOVIN Neuronal acetylcholine receptor subunit beta-4 OS=Bos taurus
GN=CHRNB4 PE=2 SV=1
Length = 496
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 26 EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAP 85
++ A EGV FIAQH+K D D ++EDWKYV+MV+DR FL VF CVLGT G+ P
Sbjct: 427 DVQEALEGVSFIAQHMKSDDLDQSVIEDWKYVAMVVDRLFLWVFVVVCVLGTVGLFL--P 484
Query: 86 SLYDNTAP 93
L+ P
Sbjct: 485 PLFQTHTP 492
>sp|P23414|ACH1_SCHGR Acetylcholine receptor subunit alpha-L1 OS=Schistocerca gregaria
PE=2 SV=1
Length = 557
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 10 ASLADADNVIPRQLTP-EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCV 68
SL+D V R+ P E+ A V FI H++ D+ + +DW +V+MVLDR FL +
Sbjct: 457 GSLSD---VATRKKYPFELEKAIHNVLFIQNHMQRQDEFDAEDQDWGFVAMVLDRLFLWI 513
Query: 69 FTAACVLGTCGIIFQAPSLYDNTAPIDIQMTRITQ 103
FT A ++GT I+ +AP+LYD+T PID++++ + Q
Sbjct: 514 FTIASIVGTFAILCEAPALYDDTKPIDMELSSVAQ 548
>sp|Q8R493|ACHB4_MOUSE Neuronal acetylcholine receptor subunit beta-4 OS=Mus musculus
GN=Chrnb4 PE=2 SV=1
Length = 495
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 26 EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAP 85
++ A EGV FIAQH++ D+D ++EDWK+V+MV+DR FL VF C+LGT G+ P
Sbjct: 426 DLQEALEGVSFIAQHLESDDRDQSVIEDWKFVAMVVDRLFLWVFVIVCILGTMGLFL--P 483
Query: 86 SLYDNTAP 93
L+ AP
Sbjct: 484 PLFQIHAP 491
>sp|P12392|ACHB4_RAT Neuronal acetylcholine receptor subunit beta-4 OS=Rattus norvegicus
GN=Chrnb4 PE=2 SV=1
Length = 495
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 26 EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAP 85
++ A EGV FIAQH++ D+D ++EDWK+V+MV+DR FL VF C+LGT G+ P
Sbjct: 426 DLQEALEGVSFIAQHLESDDRDQSVIEDWKFVAMVVDRLFLWVFVFVCILGTMGLFL--P 483
Query: 86 SLYDNTAP 93
L+ AP
Sbjct: 484 PLFQIHAP 491
>sp|Q23022|ACH5_CAEEL Acetylcholine receptor subunit alpha-type unc-38 OS=Caenorhabditis
elegans GN=unc-38 PE=2 SV=1
Length = 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 16 DNVIPRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVL 75
D + +P ++ AFE + FIA+ +K D+D++I EDWKYV+MVLDR FL +F+ AC +
Sbjct: 417 DTIQKMYYSPPVVKAFENICFIAELLKKKDRDDKIDEDWKYVAMVLDRLFLLIFSIACFV 476
Query: 76 GTCGIIFQAPSLYDNTAPIDIQ 97
GT I+ +AP+LYD PID+Q
Sbjct: 477 GTVIILLRAPTLYDTRQPIDLQ 498
>sp|P32297|ACHA3_HUMAN Neuronal acetylcholine receptor subunit alpha-3 OS=Homo sapiens
GN=CHRNA3 PE=1 SV=4
Length = 505
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PEI A + V++IA+++K ++ EI +DWKYV+MV+DR FL VFT C+LGT G+
Sbjct: 437 LSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFL 496
Query: 83 Q 83
Q
Sbjct: 497 Q 497
>sp|P19370|ACHB2_CARAU Neuronal acetylcholine receptor subunit beta-2 (Fragment)
OS=Carassius auratus GN=chrnb2 PE=2 SV=1
Length = 459
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 29 SAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
A +GVRFIA+H+K D D I+EDWKYV+MV+DR FL +F CV+GT G+ Q
Sbjct: 387 EAIDGVRFIAEHMKIEDDDEGIIEDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQ 441
>sp|P09484|ACHB2_CHICK Neuronal acetylcholine receptor subunit beta-2 OS=Gallus gallus
GN=CHRNB2 PE=1 SV=1
Length = 491
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 29 SAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY 88
A EGVRFIA H++ D D + EDWKYV+MV+DR FL +F CV GT G+ Q L+
Sbjct: 415 EAVEGVRFIADHMRSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQP--LF 472
Query: 89 DNTA 92
N A
Sbjct: 473 QNYA 476
>sp|P09480|ACHA2_CHICK Neuronal acetylcholine receptor subunit alpha-2 OS=Gallus gallus
GN=CHRNA2 PE=2 SV=1
Length = 528
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P IL A EGV++IA H++ D D + EDWKYV+MV+DR FL +F C+LGT G +F
Sbjct: 461 LSPSILRALEGVQYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVG-LF 519
Query: 83 QAPSL 87
P L
Sbjct: 520 LPPYL 524
>sp|Q91X60|ACHA2_MOUSE Neuronal acetylcholine receptor subunit alpha-2 OS=Mus musculus
GN=Chrna2 PE=2 SV=1
Length = 512
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P+I A EGV +IA H++ D D+ + EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 445 LSPQIQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVVDRIFLWLFIIVCFLGTIGLFL 504
>sp|Q19AE6|ACHA4_MUSPF Neuronal acetylcholine receptor subunit alpha-4 OS=Mustela putorius
furo GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV++IA H+K D D + EDWKYV+MV+DR FL VF C+LGT G+
Sbjct: 560 LSPALARAVEGVQYIADHLKAEDTDFSVKEDWKYVAMVIDRIFLWVFVIVCLLGTAGLFL 619
>sp|P18845|ACHA3_CARAU Neuronal acetylcholine receptor subunit alpha-3 OS=Carassius
auratus GN=chrna3 PE=2 SV=1
Length = 512
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
++PEI A E V++IA++++ +K E+ +DWKYV+MV+DR FL VF CVLGT G+
Sbjct: 445 VSPEIKQAIESVKYIAENMRSRNKAKEVEDDWKYVAMVIDRIFLWVFVLVCVLGTLGLFL 504
Query: 83 Q 83
Q
Sbjct: 505 Q 505
>sp|P17644|ACH2_DROME Acetylcholine receptor subunit alpha-like 2 OS=Drosophila
melanogaster GN=nAcRalpha-96Ab PE=2 SV=1
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 11 SLADADNVIPRQLTP-EILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVF 69
SL+D V R+ P E+ A V FI H++ D+ N +DW +V+MV+DR FL +F
Sbjct: 476 SLSD---VAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLF 532
Query: 70 TAACVLGTCGIIFQAPSLYDNTAPIDIQMTRITQ 103
A ++GT I+ +APSLYD+T ID+Q++ + +
Sbjct: 533 MIASLVGTFVILGEAPSLYDDTKAIDVQLSDVAK 566
>sp|Q07263|ACHA3_BOVIN Neuronal acetylcholine receptor subunit alpha-3 OS=Bos taurus
GN=CHRNA3 PE=2 SV=1
Length = 495
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PEI A + V++IA+++K ++ EI +DWKYV+MV+DR FL VF C+LGT G+
Sbjct: 427 LSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 486
Query: 83 Q 83
Q
Sbjct: 487 Q 487
>sp|Q5IS52|ACHA2_PANTR Neuronal acetylcholine receptor subunit alpha-2 OS=Pan troglodytes
GN=CHRNA2 PE=2 SV=1
Length = 529
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV +IA H++ D D+ + EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 462 LSPHMQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVIDRIFLWLFIIVCFLGTIGLFL 521
>sp|Q5IS77|ACHA4_PANTR Neuronal acetylcholine receptor subunit alpha-4 OS=Pan troglodytes
GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 13 ADADNVIPRQL--TPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFT 70
A + PR L +P + A EGV++IA H+K D D + EDWKYV+MV+DR FL +F
Sbjct: 548 ARSTKAPPRHLPLSPALTRAVEGVQYIADHLKAEDTDFSVKEDWKYVAMVIDRIFLWMFI 607
Query: 71 AACVLGTCGIIF 82
C+LGT G+
Sbjct: 608 IVCLLGTVGLFL 619
>sp|Q15822|ACHA2_HUMAN Neuronal acetylcholine receptor subunit alpha-2 OS=Homo sapiens
GN=CHRNA2 PE=1 SV=2
Length = 529
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV +IA H++ D D+ + EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 462 LSPHMQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVIDRIFLWLFIIVCFLGTIGLFL 521
>sp|P43681|ACHA4_HUMAN Neuronal acetylcholine receptor subunit alpha-4 OS=Homo sapiens
GN=CHRNA4 PE=1 SV=2
Length = 627
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV++IA H+K D D + EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 560 LSPALTRAVEGVQYIADHLKAEDTDFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 619
>sp|Q8R4G9|ACHA3_MOUSE Neuronal acetylcholine receptor subunit alpha-3 OS=Mus musculus
GN=Chrna3 PE=2 SV=1
Length = 499
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PEI A + V++IA+++K + EI +DWKYV+MV+DR FL VF C+LGT G+
Sbjct: 431 LSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 490
Query: 83 QAPSLYDNT 91
Q D+T
Sbjct: 491 QPLMARDDT 499
>sp|P12390|ACHB2_RAT Neuronal acetylcholine receptor subunit beta-2 OS=Rattus norvegicus
GN=Chrnb2 PE=2 SV=2
Length = 500
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 30 AFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
A +GVRFIA H++ D D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 425 AVDGVRFIADHMRSEDDDQSVREDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQ 478
>sp|P04757|ACHA3_RAT Neuronal acetylcholine receptor subunit alpha-3 OS=Rattus
norvegicus GN=Chrna3 PE=2 SV=1
Length = 499
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PEI A + V++IA+++K + EI +DWKYV+MV+DR FL VF C+LGT G+
Sbjct: 431 LSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 490
Query: 83 QAPSLYDNT 91
Q D+T
Sbjct: 491 QPLMARDDT 499
>sp|O70174|ACHA4_MOUSE Neuronal acetylcholine receptor subunit alpha-4 OS=Mus musculus
GN=Chrna4 PE=2 SV=2
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV++IA H+K D D + EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 562 LSPALTRAVEGVQYIADHLKAEDTDFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 621
>sp|P17787|ACHB2_HUMAN Neuronal acetylcholine receptor subunit beta-2 OS=Homo sapiens
GN=CHRNB2 PE=1 SV=1
Length = 502
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 30 AFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
A +GVRFIA H++ D D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 427 AVDGVRFIADHMRSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 480
>sp|P09483|ACHA4_RAT Neuronal acetylcholine receptor subunit alpha-4 OS=Rattus
norvegicus GN=Chrna4 PE=1 SV=3
Length = 630
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P + A EGV++IA H+K D D + EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 564 LSPALTRAVEGVQYIADHLKAEDTDFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 623
>sp|Q9ERK7|ACHB2_MOUSE Neuronal acetylcholine receptor subunit beta-2 OS=Mus musculus
GN=Chrnb2 PE=2 SV=1
Length = 501
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 30 AFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
A +GVRFIA H++ D D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 426 AVDGVRFIADHMRSEDDDQSVREDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 479
>sp|P09481|ACHA3_CHICK Neuronal acetylcholine receptor subunit alpha-3 OS=Gallus gallus
GN=CHRNA3 PE=2 SV=2
Length = 496
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PE+ A E V++IA+++K ++ EI +DWKYV+MV+DR FL VF C+LGT G+
Sbjct: 428 LSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 487
Query: 83 Q 83
Q
Sbjct: 488 Q 488
>sp|P12389|ACHA2_RAT Neuronal acetylcholine receptor subunit alpha-2 OS=Rattus
norvegicus GN=Chrna2 PE=2 SV=2
Length = 511
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+P+I A EGV +IA ++ D D+ + EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 444 LSPQIQKALEGVHYIADRLRSEDADSSVKEDWKYVAMVVDRIFLWLFIIVCFLGTIGLFL 503
>sp|Q98880|ACHA_DANRE Acetylcholine receptor subunit alpha OS=Danio rerio GN=chrna1 PE=2
SV=1
Length = 456
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 7 TYHASLADADNVIPRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFL 66
TYH+ P P++ SA EGV++IA +K ++ N E+WK+V+MVLD L
Sbjct: 381 TYHS---------PITKNPDVRSAIEGVKYIADTMKSDEESNNAAEEWKFVAMVLDHILL 431
Query: 67 CVFTAACVLGTCGI 80
CVF A C++GT G+
Sbjct: 432 CVFMAVCIIGTLGV 445
>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 OS=Gallus gallus
GN=CHRNA4 PE=1 SV=1
Length = 622
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
++P + A EGV +IA H++ D D + EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 555 MSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 614
>sp|P02711|ACHA_TORMA Acetylcholine receptor subunit alpha OS=Torpedo marmorata GN=CHRNA1
PE=1 SV=1
Length = 461
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 20 PRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCG 79
P P++ SA EGV++IA+H+K ++ + E+WKYV+MV+D LCVF C++GT
Sbjct: 389 PLIKNPDVKSAIEGVKYIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVS 448
Query: 80 I 80
+
Sbjct: 449 V 449
>sp|P02710|ACHA_TORCA Acetylcholine receptor subunit alpha OS=Torpedo californica
GN=CHRNA1 PE=1 SV=1
Length = 461
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 20 PRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCG 79
P P++ SA EGV++IA+H+K ++ + E+WKYV+MV+D LCVF C++GT
Sbjct: 389 PLIKNPDVKSAIEGVKYIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVS 448
Query: 80 I 80
+
Sbjct: 449 V 449
>sp|P49581|ACHA6_CHICK Neuronal acetylcholine receptor subunit alpha-6 OS=Gallus gallus
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 22 QLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGII 81
+ +PE+ V+FIA+++K ++ E+ +DWKYV+MV+DR FL VF CV GT G+
Sbjct: 427 EYSPEVKDVINNVQFIAENMKSQNETKEVEDDWKYVAMVIDRVFLWVFIILCVFGTAGLF 486
Query: 82 FQ 83
Q
Sbjct: 487 IQ 488
>sp|P48181|ACH2_CAEEL Acetylcholine receptor subunit beta-type unc-29 OS=Caenorhabditis
elegans GN=unc-29 PE=2 SV=2
Length = 493
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+ + L A + + +I +H+K ++ +DWKYV+M++DR L VF V GTCGI+F
Sbjct: 405 LSTDALRAIDAIEYITEHLKRDEQHKSFRDDWKYVAMIIDRLLLYVFFGITVGGTCGILF 464
Query: 83 QAPSLY 88
AP ++
Sbjct: 465 SAPHVF 470
>sp|Q15825|ACHA6_HUMAN Neuronal acetylcholine receptor subunit alpha-6 OS=Homo sapiens
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 24 TPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
+PE+ V+FIA+++K ++ E+ +DWKYV+MV+DR FL VF CV GT G+ Q
Sbjct: 426 SPEVEDVINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>sp|Q5IS76|ACHA6_PANTR Neuronal acetylcholine receptor subunit alpha-6 OS=Pan troglodytes
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 24 TPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
+PE+ V+FIA+++K ++ E+ +DWKYV+MV+DR FL VF CV GT G+ Q
Sbjct: 426 SPEVEDVINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>sp|P04755|ACH3_DROME Acetylcholine receptor subunit beta-like 1 OS=Drosophila
melanogaster GN=nAcRbeta-64B PE=2 SV=1
Length = 521
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 23 LTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 82
L+PE A E V FIA+H+++ D + EDWKYV+MV+DR L +F GT GI+
Sbjct: 441 LSPEASKATEAVEFIAEHLRNEDLYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTVGILM 500
Query: 83 QAPSLYD 89
AP +++
Sbjct: 501 DAPHIFE 507
>sp|Q9R0W9|ACHA6_MOUSE Neuronal acetylcholine receptor subunit alpha-6 OS=Mus musculus
GN=Chrna6 PE=2 SV=2
Length = 494
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 24 TPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
+ ++ E V+FIA+++K ++ NE+ +DWKY++MV+DR FL VF CV GT G+ Q
Sbjct: 426 SSDVEDVIESVQFIAENMKSHNETNEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 485
>sp|Q27218|ACH7_CAEEL Acetylcholine receptor subunit beta-type lev-1 OS=Caenorhabditis
elegans GN=lev-1 PE=1 SV=1
Length = 507
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 22 QLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGII 81
+L+PE A + + FI ++ +D + + +DWK+++ V+DRF L F A V GT GII
Sbjct: 412 ELSPEAQRAIDAIEFITENRRDEEITKQFRDDWKFIASVVDRFLLYGFFGATVGGTIGII 471
Query: 82 FQAPSLYD 89
F APS+++
Sbjct: 472 FTAPSVFE 479
>sp|P02709|ACHA_BOVIN Acetylcholine receptor subunit alpha OS=Bos taurus GN=CHRNA1 PE=2
SV=1
Length = 457
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 25 PEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGI 80
PE+ SA EG+++IA+ +K + N E+WKYV+MV+D L VF C++GT +
Sbjct: 390 PEVKSAIEGIKYIAETMKSDQESNNAAEEWKYVAMVMDHILLAVFMLVCIIGTLAV 445
>sp|P43143|ACHA6_RAT Neuronal acetylcholine receptor subunit alpha-6 OS=Rattus
norvegicus GN=Chrna6 PE=2 SV=1
Length = 493
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 25 PEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 83
P++ + V+FIA+++K ++ E+ +DWKY++MV+DR FL VF CV GT G+ Q
Sbjct: 426 PDVEDVIDSVQFIAENMKSHNETKEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 484
>sp|P04756|ACHA_MOUSE Acetylcholine receptor subunit alpha OS=Mus musculus GN=Chrna1 PE=1
SV=1
Length = 457
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 25 PEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGI 80
PE+ SA EGV++IA+ +K + N E+WKYV+MV+D L VF C++GT +
Sbjct: 390 PEVKSAIEGVKYIAETMKSDQESNNAAEEWKYVAMVMDHILLGVFMLVCLIGTLAV 445
>sp|P05377|ACHAB_XENLA Acetylcholine receptor subunit alpha-1-B OS=Xenopus laevis
GN=chrna1-b PE=2 SV=1
Length = 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 20 PRQLTPEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCG 79
P P++ SA EG+++IA+ +K + N+ E+WK+V+MVLD L VF CV+GT
Sbjct: 385 PALKNPDVKSAIEGIKYIAETMKSDQESNKASEEWKFVAMVLDHILLAVFMTVCVIGTLA 444
Query: 80 I 80
+
Sbjct: 445 V 445
>sp|P25108|ACHA_RAT Acetylcholine receptor subunit alpha OS=Rattus norvegicus GN=Chrna1
PE=2 SV=1
Length = 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 25 PEILSAFEGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLCVFTAACVLGTCGI 80
PE+ SA EGV++IA+ +K + N E+WKYV+MV+D L VF C++GT +
Sbjct: 390 PEVKSAIEGVKYIAETMKSDQESNNASEEWKYVAMVMDHILLGVFMLVCLIGTLAV 445
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,995,111
Number of Sequences: 539616
Number of extensions: 1636506
Number of successful extensions: 4118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4003
Number of HSP's gapped (non-prelim): 118
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)