Query psy3031
Match_columns 136
No_of_seqs 180 out of 435
Neff 5.9
Searched_HMMs 46136
Date Fri Aug 16 23:45:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3031.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3031hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0303|consensus 100.0 1E-37 2.2E-42 262.9 7.9 88 1-88 1-104 (472)
2 PF08953 DUF1899: Domain of un 100.0 4.4E-31 9.6E-36 174.1 4.5 65 4-68 1-65 (65)
3 KOG0303|consensus 99.9 6.5E-25 1.4E-29 185.6 2.7 90 43-132 8-129 (472)
4 KOG1445|consensus 99.9 3.9E-22 8.4E-27 176.7 7.1 86 1-88 1-102 (1012)
5 PTZ00421 coronin; Provisional 99.8 2.2E-18 4.8E-23 150.1 9.0 101 8-113 3-137 (493)
6 KOG1445|consensus 99.7 6.3E-17 1.4E-21 143.9 8.9 82 5-88 550-650 (1012)
7 PF08953 DUF1899: Domain of un 99.6 7.1E-17 1.5E-21 106.5 0.8 59 43-101 5-64 (65)
8 PTZ00420 coronin; Provisional 99.6 1.7E-15 3.6E-20 134.3 8.2 104 1-113 1-137 (568)
9 PTZ00421 coronin; Provisional 98.7 1.7E-08 3.6E-13 88.4 5.6 70 43-114 3-88 (493)
10 PTZ00420 coronin; Provisional 98.5 1.2E-07 2.6E-12 84.6 4.4 70 44-114 5-87 (568)
11 PRK03629 tolB translocation pr 82.5 7.3 0.00016 33.3 7.7 43 70-113 378-429 (429)
12 KOG0264|consensus 79.9 2.1 4.7E-05 37.4 3.5 42 71-115 278-330 (422)
13 KOG0277|consensus 79.4 2.5 5.5E-05 35.3 3.6 46 69-114 12-73 (311)
14 PRK02889 tolB translocation pr 76.4 15 0.00032 31.3 7.7 43 70-113 375-426 (427)
15 KOG1034|consensus 70.4 7.1 0.00015 33.6 4.2 46 69-114 139-194 (385)
16 PRK01742 tolB translocation pr 69.1 23 0.0005 30.1 7.1 44 70-114 376-428 (429)
17 KOG0293|consensus 68.8 7.6 0.00017 34.4 4.1 38 77-114 235-282 (519)
18 KOG0277|consensus 66.7 16 0.00034 30.7 5.4 56 55-113 36-116 (311)
19 KOG0269|consensus 66.3 21 0.00045 33.8 6.6 32 8-41 73-104 (839)
20 PRK05137 tolB translocation pr 66.1 36 0.00079 28.8 7.7 44 70-114 381-435 (435)
21 PRK00178 tolB translocation pr 61.1 52 0.0011 27.6 7.8 42 71-113 379-429 (430)
22 PRK01029 tolB translocation pr 60.7 50 0.0011 28.4 7.6 43 71-114 376-427 (428)
23 PRK04792 tolB translocation pr 60.4 54 0.0012 28.2 7.9 42 71-113 398-448 (448)
24 PF08662 eIF2A: Eukaryotic tra 56.7 19 0.00041 27.5 4.0 58 55-114 47-113 (194)
25 KOG0293|consensus 55.4 27 0.00058 31.1 5.1 43 71-114 445-495 (519)
26 PRK04922 tolB translocation pr 42.7 1.4E+02 0.0031 25.3 7.6 41 71-112 384-433 (433)
27 KOG2315|consensus 35.3 55 0.0012 29.9 4.0 19 94-112 263-281 (566)
28 KOG2055|consensus 34.4 98 0.0021 27.9 5.3 84 8-101 292-376 (514)
29 COG5276 Uncharacterized conser 34.1 3.1E+02 0.0067 23.7 9.3 60 29-101 166-225 (370)
30 KOG0302|consensus 33.7 1.2E+02 0.0025 26.9 5.6 45 67-114 301-360 (440)
31 KOG0647|consensus 33.5 47 0.001 28.4 3.1 39 69-111 31-82 (347)
32 KOG0973|consensus 33.0 35 0.00075 33.0 2.5 13 101-114 129-141 (942)
33 KOG0273|consensus 32.0 1.6E+02 0.0035 26.6 6.3 72 37-113 288-371 (524)
34 KOG0264|consensus 31.6 52 0.0011 29.0 3.1 44 69-115 231-286 (422)
35 KOG1274|consensus 30.3 1.3E+02 0.0028 29.1 5.7 64 46-114 191-283 (933)
36 KOG1523|consensus 28.6 1.9E+02 0.0041 25.0 5.9 72 38-113 69-158 (361)
37 KOG2066|consensus 27.5 1.5E+02 0.0033 28.4 5.6 68 40-114 45-125 (846)
38 KOG1274|consensus 25.4 3.1E+02 0.0068 26.7 7.2 24 89-112 199-243 (933)
39 PRK01742 tolB translocation pr 25.4 3.4E+02 0.0074 22.9 7.1 30 69-99 207-236 (429)
40 PRK04043 tolB translocation pr 24.6 4.5E+02 0.0098 22.5 8.0 28 71-99 373-400 (419)
41 PRK05137 tolB translocation pr 24.4 3.5E+02 0.0076 22.8 7.0 30 69-99 205-234 (435)
42 KOG0269|consensus 23.7 1E+02 0.0023 29.4 3.8 43 71-114 226-276 (839)
43 KOG2394|consensus 23.4 1E+02 0.0022 28.5 3.5 39 70-112 295-343 (636)
44 KOG0389|consensus 22.4 75 0.0016 30.6 2.6 19 96-114 843-863 (941)
45 PF09969 DUF2203: Uncharacteri 21.2 76 0.0016 22.9 2.0 23 114-136 75-97 (120)
46 KOG2919|consensus 20.6 2.2E+02 0.0048 24.8 4.9 56 58-114 180-263 (406)
No 1
>KOG0303|consensus
Probab=100.00 E-value=1e-37 Score=262.90 Aligned_cols=88 Identities=56% Similarity=1.012 Sum_probs=86.0
Q ss_pred CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031 1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------ 68 (136)
Q Consensus 1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------ 68 (136)
|++|+||+|||||||||+.|+|+||+|||++..+||++|||+|+||+||.|.++|||+|.|||+.++|
T Consensus 1 m~~~~vR~SKfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GH 80 (472)
T KOG0303|consen 1 MSRHVVRSSKFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGH 80 (472)
T ss_pred CcchhhhhhhhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----ccCccccCCCceEEEEEeec
Q psy3031 69 ----WDSTFCAVNPKFLAIIVESA 88 (136)
Q Consensus 69 ----~D~~f~p~n~~~lAv~~e~~ 88 (136)
.|..|||||++.||+++||+
T Consensus 81 t~~vLDi~w~PfnD~vIASgSeD~ 104 (472)
T KOG0303|consen 81 TAPVLDIDWCPFNDCVIASGSEDT 104 (472)
T ss_pred cccccccccCccCCceeecCCCCc
Confidence 59999999999999999988
No 2
>PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins. The function is unknown. ; PDB: 2B4E_A 2AQ5_A.
Probab=99.97 E-value=4.4e-31 Score=174.13 Aligned_cols=65 Identities=71% Similarity=1.137 Sum_probs=40.3
Q ss_pred CcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc
Q psy3031 4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS 68 (136)
Q Consensus 4 r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g 68 (136)
||||+||||||||+++|||.||+|||+++++||+|+||||+||+|++|+++|||+++|||++++|
T Consensus 1 r~vR~SKfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~~G 65 (65)
T PF08953_consen 1 RFVRSSKFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNKTG 65 (65)
T ss_dssp ------TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT--E
T ss_pred CcccccccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCCCC
Confidence 68999999999999999999999999999999999999999999999998899999999999986
No 3
>KOG0303|consensus
Probab=99.90 E-value=6.5e-25 Score=185.55 Aligned_cols=90 Identities=38% Similarity=0.742 Sum_probs=85.1
Q ss_pred CCcEEEEeeecC-CCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc--------------cceeee
Q psy3031 43 NPKFLAIIVESA-GGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY--------------HPALAV 107 (136)
Q Consensus 43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~--------------~~vld~ 107 (136)
.+||+||..|.. ...||..|+++++.||++||++||+|||+++|++|||+|+||||+++ +||||+
T Consensus 8 ~SKfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi 87 (472)
T KOG0303|consen 8 SSKFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDI 87 (472)
T ss_pred hhhhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCcccccccc
Confidence 589999999976 45799999999999999999999999999999999999999999886 799999
Q ss_pred ecccccc-----------------CCCcceeeccCCCCceee
Q psy3031 108 EWSLTFD-----------------TSNGVMFPLYDPDTNLVY 132 (136)
Q Consensus 108 ~~~p~~d-----------------~~~g~~~~~~d~d~~l~~ 132 (136)
+||||+| |++||.++++.|.+.|.|
T Consensus 88 ~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~g 129 (472)
T KOG0303|consen 88 DWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYG 129 (472)
T ss_pred ccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEee
Confidence 9999998 899999999999999876
No 4
>KOG1445|consensus
Probab=99.86 E-value=3.9e-22 Score=176.68 Aligned_cols=86 Identities=28% Similarity=0.351 Sum_probs=82.4
Q ss_pred CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031 1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------ 68 (136)
Q Consensus 1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------ 68 (136)
|+|| |++|||||...+++|||.|+.+|++++.+.++|.|++++.|+|++|+. -||.++|+|++..|
T Consensus 1 MawR-F~aSKfknt~p~vPk~E~~i~di~vG~~~~~~n~I~aS~~flAFn~e~-~G~~lgvlPl~~~Gr~~r~i~~l~~H 78 (1012)
T KOG1445|consen 1 MAWR-FAASKFKNTTPKVPKKEETIFDIPVGNLSCTNNGIHASADFLAFNIEG-EGGKLGVLPLTAKGRRTRDIGILAAH 78 (1012)
T ss_pred Cccc-cchhhcccCCCCCCchhhheeecccccccccCCCcccccceEEEeecC-CCceEEEEeccccCccccccceeecc
Confidence 9999 999999999999999999999999999999999999999999999996 57899999999988
Q ss_pred ----ccCccccCCCceEEEEEeec
Q psy3031 69 ----WDSTFCAVNPKFLAIIVESA 88 (136)
Q Consensus 69 ----~D~~f~p~n~~~lAv~~e~~ 88 (136)
+|..|+||.+.+||+++.|.
T Consensus 79 ~d~VtDl~FspF~D~LLAT~S~D~ 102 (1012)
T KOG1445|consen 79 GDQVTDLGFSPFADELLATCSRDE 102 (1012)
T ss_pred cceeeccCccccchhhhhcccCCC
Confidence 69999999999999999876
No 5
>PTZ00421 coronin; Provisional
Probab=99.76 E-value=2.2e-18 Score=150.08 Aligned_cols=101 Identities=23% Similarity=0.320 Sum_probs=83.8
Q ss_pred ccCCceeecccCcccccccccccccCccC-CCceeeCCcEEEEeeecCCCceEEEecCCCCc----------------cc
Q psy3031 8 SSKFRHVYGTALKREFCYDNIRVSKSSWD-STFCAVNPKFLAIIVESAGGGAFIVLPLNKSS----------------WD 70 (136)
Q Consensus 8 ~SKfRHv~g~~~kke~~~~~ir~s~~~~d-~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g----------------~D 70 (136)
+||||||||+++|||.||+|||+++.+|| +++|++|.+|+|++|+..|| .+|+++++.| +|
T Consensus 3 ~sk~rh~~g~~~k~~~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg--~~v~~~~~~G~~~~~~~~l~GH~~~V~~ 80 (493)
T PTZ00421 3 VSRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGS--TAVLKHTDYGKLASNPPILLGQEGPIID 80 (493)
T ss_pred cccccccccccCCcccceeccccccccCCCCCcEeECCceEEEEEecCCc--eEEeeccccccCCCCCceEeCCCCCEEE
Confidence 69999999999999999999999999999 89999999999999997554 4788887655 57
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCC-----------------Cccceeeeeccccc
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLN-----------------KYHPALAVEWSLTF 113 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~-----------------~~~~vld~~~~p~~ 113 (136)
..|+|+|+++||++++++ .+-|--+. ....|..++|+|..
T Consensus 81 v~fsP~d~~~LaSgS~Dg---tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~ 137 (493)
T PTZ00421 81 VAFNPFDPQKLFTASEDG---TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA 137 (493)
T ss_pred EEEcCCCCCEEEEEeCCC---EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC
Confidence 889999999999998765 33333221 12678999999864
No 6
>KOG1445|consensus
Probab=99.69 E-value=6.3e-17 Score=143.86 Aligned_cols=82 Identities=29% Similarity=0.399 Sum_probs=70.2
Q ss_pred cccccCCceeecccCcccccccccccc---cCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc-------------
Q psy3031 5 VVRSSKFRHVYGTALKREFCYDNIRVS---KSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------- 68 (136)
Q Consensus 5 ~vr~SKfRHv~g~~~kke~~~~~ir~s---~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------- 68 (136)
+-+.|||||+.|++.+|+.+|+|+|-- ...+++.||+ |.+++|||+.. .||.++|+.+++.|
T Consensus 550 ~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfca-n~~rvAVPL~g-~gG~iai~el~~PGrLPDgv~p~l~Ng 627 (1012)
T KOG1445|consen 550 VGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCA-NNKRVAVPLAG-SGGVIAIYELNEPGRLPDGVMPGLFNG 627 (1012)
T ss_pred eccchheeeccCccccchhhhhhhhcccccCCCccCceee-ccceEEEEecC-CCceEEEEEcCCCCCCCcccccccccC
Confidence 446799999999999999999998733 3444555555 99999999885 58899999999999
Q ss_pred ---ccCccccCCCceEEEEEeec
Q psy3031 69 ---WDSTFCAVNPKFLAIIVESA 88 (136)
Q Consensus 69 ---~D~~f~p~n~~~lAv~~e~~ 88 (136)
+|+.|.||++..||++.|++
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg 650 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDG 650 (1012)
T ss_pred ceeeecccCCCChHHeeecccCc
Confidence 69999999999999999986
No 7
>PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins. The function is unknown. ; PDB: 2B4E_A 2AQ5_A.
Probab=99.62 E-value=7.1e-17 Score=106.47 Aligned_cols=59 Identities=47% Similarity=0.750 Sum_probs=37.6
Q ss_pred CCcEEEEeeecC-CCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc
Q psy3031 43 NPKFLAIIVESA-GGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY 101 (136)
Q Consensus 43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~ 101 (136)
.+||+++..+.. ...+|..|+++.+.||.++|++|++|||+.||++|||+|+||||+++
T Consensus 5 ~SKfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~~ 64 (65)
T PF08953_consen 5 SSKFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNKT 64 (65)
T ss_dssp --TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT--
T ss_pred ccccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCCC
Confidence 589999999977 44799999999999999999999999999999999999999999986
No 8
>PTZ00420 coronin; Provisional
Probab=99.60 E-value=1.7e-15 Score=134.27 Aligned_cols=104 Identities=21% Similarity=0.288 Sum_probs=85.8
Q ss_pred CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031 1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------ 68 (136)
Q Consensus 1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------ 68 (136)
|+ |+ |||||+||++.+ .||+|||+++..|++++|++|++|+|++|+..|||.++++++.+.+
T Consensus 1 m~-~~---~~~~~~~~~~~~--~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~ 74 (568)
T PTZ00420 1 MY-NV---PLIKNLYPDPSN--NLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHT 74 (568)
T ss_pred CC-cc---chhhhcCCchhh--CeeccEEccccccCceeEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCC
Confidence 67 63 999999999887 6799999999999999999999999999998889999999987543
Q ss_pred ---ccCccccCCCceEEEEEeecCCceEEEEeCC------------------Cccceeeeeccccc
Q psy3031 69 ---WDSTFCAVNPKFLAIIVESAGGGAFIVLPLN------------------KYHPALAVEWSLTF 113 (136)
Q Consensus 69 ---~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~------------------~~~~vld~~~~p~~ 113 (136)
+|..|+|+++++||++++++ .+-|--+. ....|..++|+|..
T Consensus 75 ~~V~~lafsP~~~~lLASgS~Dg---tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g 137 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGSEDL---TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMN 137 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCC
Confidence 57899999999999998765 33333221 12578899999854
No 9
>PTZ00421 coronin; Provisional
Probab=98.72 E-value=1.7e-08 Score=88.41 Aligned_cols=70 Identities=23% Similarity=0.316 Sum_probs=61.1
Q ss_pred CCcEEEEeeecC-CCceEEEecCCCCccc-CccccCCCceEEEEEeecCCceEEEEeCCCc--------------cceee
Q psy3031 43 NPKFLAIIVESA-GGGAFIVLPLNKSSWD-STFCAVNPKFLAIIVESAGGGAFIVLPLNKY--------------HPALA 106 (136)
Q Consensus 43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D-~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~--------------~~vld 106 (136)
.+||+|+..+.. ...+|..|+++..+|| .+++++|++|+|+.|+..||+ +|+|+++. ++|++
T Consensus 3 ~sk~rh~~g~~~k~~~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~--~v~~~~~~G~~~~~~~~l~GH~~~V~~ 80 (493)
T PTZ00421 3 VSRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGST--AVLKHTDYGKLASNPPILLGQEGPIID 80 (493)
T ss_pred cccccccccccCCcccceeccccccccCCCCCcEeECCceEEEEEecCCce--EEeeccccccCCCCCceEeCCCCCEEE
Confidence 489999999977 4479999999999999 899999999999999987765 78888653 68999
Q ss_pred eecccccc
Q psy3031 107 VEWSLTFD 114 (136)
Q Consensus 107 ~~~~p~~d 114 (136)
++|+||++
T Consensus 81 v~fsP~d~ 88 (493)
T PTZ00421 81 VAFNPFDP 88 (493)
T ss_pred EEEcCCCC
Confidence 99999865
No 10
>PTZ00420 coronin; Provisional
Probab=98.49 E-value=1.2e-07 Score=84.59 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=63.1
Q ss_pred CcEEEEeeecCCCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc-------------cceeeeecc
Q psy3031 44 PKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY-------------HPALAVEWS 110 (136)
Q Consensus 44 ~kfiAv~~~~~gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~-------------~~vld~~~~ 110 (136)
++|++++.+. -..+|..|+++...+|++++++|++|+|+.|+..|||++.|+++.+. ++|++++|+
T Consensus 5 ~~~~~~~~~~-~~~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafs 83 (568)
T PTZ00420 5 PLIKNLYPDP-SNNLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFN 83 (568)
T ss_pred chhhhcCCch-hhCeeccEEccccccCceeEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEc
Confidence 7899999885 35689999999999999999999999999999999999999998642 689999999
Q ss_pred cccc
Q psy3031 111 LTFD 114 (136)
Q Consensus 111 p~~d 114 (136)
|+++
T Consensus 84 P~~~ 87 (568)
T PTZ00420 84 PCFS 87 (568)
T ss_pred CCCC
Confidence 9864
No 11
>PRK03629 tolB translocation protein TolB; Provisional
Probab=82.48 E-value=7.3 Score=33.30 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=30.9
Q ss_pred cCccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031 70 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF 113 (136)
Q Consensus 70 D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~ 113 (136)
++.|.| |.++|+..+++.+.+.+.++.++.. +.+.+.+|+|++
T Consensus 378 ~p~~Sp-DG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~~p~Wsp~~ 429 (429)
T PRK03629 378 TPSIAP-NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 429 (429)
T ss_pred CceECC-CCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcCCcccCCCC
Confidence 356664 7778888888777666777776432 567888999874
No 12
>KOG0264|consensus
Probab=79.88 E-value=2.1 Score=37.43 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=33.1
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCCC---c--------cceeeeeccccccC
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLNK---Y--------HPALAVEWSLTFDT 115 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~---~--------~~vld~~~~p~~d~ 115 (136)
..|.|+|...||+++-+. .+++.-+-. . ..|+-+.|+|.+++
T Consensus 278 ~~fnp~~~~ilAT~S~D~---tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~et 330 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSADK---TVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNET 330 (422)
T ss_pred EEeCCCCCceEEeccCCC---cEEEeechhcccCceeccCCCcceEEEEeCCCCCc
Confidence 578899999999997554 777765422 1 78999999999985
No 13
>KOG0277|consensus
Probab=79.39 E-value=2.5 Score=35.26 Aligned_cols=46 Identities=22% Similarity=0.412 Sum_probs=36.1
Q ss_pred ccCccccCCCceEEEEEe----ecCCceEEEEeCCCc------------cceeeeecccccc
Q psy3031 69 WDSTFCAVNPKFLAIIVE----SAGGGAFIVLPLNKY------------HPALAVEWSLTFD 114 (136)
Q Consensus 69 ~D~~f~p~n~~~lAv~~e----~~gGG~f~V~pl~~~------------~~vld~~~~p~~d 114 (136)
---.|+||-+++||++.- -.|+|.+.|+.+... .-+.|++||+..+
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e 73 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHE 73 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCc
Confidence 345899999999999864 347899999988532 4668999999886
No 14
>PRK02889 tolB translocation protein TolB; Provisional
Probab=76.40 E-value=15 Score=31.28 Aligned_cols=43 Identities=9% Similarity=0.276 Sum_probs=28.7
Q ss_pred cCccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031 70 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF 113 (136)
Q Consensus 70 D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~ 113 (136)
+..|.| |.++|+..++..|...+.++.++.. +.+.+.+|+|++
T Consensus 375 ~p~~sp-dg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~wsp~~ 426 (427)
T PRK02889 375 SPSFAP-NGRYILYATQQGGRSVLAAVSSDGRIKQRLSVQGGDVREPSWGPFM 426 (427)
T ss_pred CceECC-CCCEEEEEEecCCCEEEEEEECCCCceEEeecCCCCCCCCccCCCC
Confidence 345655 6778888888776666666665332 456778888874
No 15
>KOG1034|consensus
Probab=70.37 E-value=7.1 Score=33.63 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=31.5
Q ss_pred ccCccccCCCceEEEEEeecC--------CceEEEEe-C-CCccceeeeecccccc
Q psy3031 69 WDSTFCAVNPKFLAIIVESAG--------GGAFIVLP-L-NKYHPALAVEWSLTFD 114 (136)
Q Consensus 69 ~D~~f~p~n~~~lAv~~e~~g--------GG~f~V~p-l-~~~~~vld~~~~p~~d 114 (136)
.+..|+|.+|++|..+++|-. +=.++|+- + ..-.+||.++|++-.|
T Consensus 139 Neik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd 194 (385)
T KOG1034|consen 139 NEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGD 194 (385)
T ss_pred hhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCC
Confidence 478999999999999998762 00011111 0 1117999999998876
No 16
>PRK01742 tolB translocation protein TolB; Provisional
Probab=69.07 E-value=23 Score=30.09 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=26.6
Q ss_pred cCccccCCCceEEEEEeecCCceEEEEeCCC---------ccceeeeecccccc
Q psy3031 70 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNK---------YHPALAVEWSLTFD 114 (136)
Q Consensus 70 D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~---------~~~vld~~~~p~~d 114 (136)
...|.| |.++|+..+.+++..-+.++.++. .+.+.+.+|+|+++
T Consensus 376 ~~~~sP-dG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~~~ 428 (429)
T PRK01742 376 SPSISP-NGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPYLT 428 (429)
T ss_pred CceECC-CCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCCCC
Confidence 346766 666888877654433333333211 15678899999875
No 17
>KOG0293|consensus
Probab=68.78 E-value=7.6 Score=34.44 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.2
Q ss_pred CCceEEEEEeecCCceEEEEeCCCc----------cceeeeecccccc
Q psy3031 77 NPKFLAIIVESAGGGAFIVLPLNKY----------HPALAVEWSLTFD 114 (136)
Q Consensus 77 n~~~lAv~~e~~gGG~f~V~pl~~~----------~~vld~~~~p~~d 114 (136)
|.+|||+++-++--+-|.|++..+. .||+-|.|||.+-
T Consensus 235 nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr 282 (519)
T KOG0293|consen 235 NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR 282 (519)
T ss_pred CCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC
Confidence 7889999999888788888887662 6999999999773
No 18
>KOG0277|consensus
Probab=66.70 E-value=16 Score=30.65 Aligned_cols=56 Identities=16% Similarity=0.417 Sum_probs=41.3
Q ss_pred CCceEEEecCCCCc--------------ccCccccCCCceEEEEEeecCCceEEEEeCCCc-----------cceeeeec
Q psy3031 55 GGGAFIVLPLNKSS--------------WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY-----------HPALAVEW 109 (136)
Q Consensus 55 gGG~~~Vlpls~~g--------------~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~-----------~~vld~~~ 109 (136)
|+|.+-++.++..+ -|-.|++.+++.++++ +|-|++.+..+..+ .+|-.++|
T Consensus 36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a---~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdw 112 (311)
T KOG0277|consen 36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAA---SGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDW 112 (311)
T ss_pred cCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEE---ecCceEEEeccCCCCcchhHHHhhhhheEEecc
Confidence 56777777776333 4789999999999998 45568777665443 68889999
Q ss_pred cccc
Q psy3031 110 SLTF 113 (136)
Q Consensus 110 ~p~~ 113 (136)
|+-.
T Consensus 113 n~~~ 116 (311)
T KOG0277|consen 113 NTVR 116 (311)
T ss_pred cccc
Confidence 8654
No 19
>KOG0269|consensus
Probab=66.35 E-value=21 Score=33.79 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=14.4
Q ss_pred ccCCceeecccCcccccccccccccCccCCCcee
Q psy3031 8 SSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCA 41 (136)
Q Consensus 8 ~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~ia 41 (136)
.=|-+|-+++-..+-....|++-+ +-++|+||
T Consensus 73 ~~~~~~~~k~kqn~~~S~~DVkW~--~~~~NlIA 104 (839)
T KOG0269|consen 73 SEKCNHRFKTKQNKFYSAADVKWG--QLYSNLIA 104 (839)
T ss_pred Ccceeeecccccceeeehhhcccc--cchhhhhe
Confidence 344455554333333333455544 34455554
No 20
>PRK05137 tolB translocation protein TolB; Provisional
Probab=66.10 E-value=36 Score=28.85 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=27.7
Q ss_pred cCccccCCCceEEEEEeecCC---ceEEEEeCCCc--------cceeeeecccccc
Q psy3031 70 DSTFCAVNPKFLAIIVESAGG---GAFIVLPLNKY--------HPALAVEWSLTFD 114 (136)
Q Consensus 70 D~~f~p~n~~~lAv~~e~~gG---G~f~V~pl~~~--------~~vld~~~~p~~d 114 (136)
+..|.| |.++|+...+..+. ..+.++.++.. +.+-+-+|+|+++
T Consensus 381 ~p~~sp-DG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l~~~~~~~~p~Wsp~~~ 435 (435)
T PRK05137 381 GPTWAP-NGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREVPTPGDASDPAWSPLLP 435 (435)
T ss_pred CCeECC-CCCEEEEEEccCCCCCcceEEEEECCCCceEEccCCCCccCcccCCCCC
Confidence 456666 66788887775544 35666766432 4456778888764
No 21
>PRK00178 tolB translocation protein TolB; Provisional
Probab=61.05 E-value=52 Score=27.57 Aligned_cols=42 Identities=17% Similarity=0.334 Sum_probs=27.6
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF 113 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~ 113 (136)
..|.| |.+.|+...+..|.+.+.++.++.. +.+-+.+|+|++
T Consensus 379 p~~sp-dg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~ws~~~ 429 (430)
T PRK00178 379 PSVAP-NGTMLIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSPYL 429 (430)
T ss_pred ceECC-CCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccCCCC
Confidence 45665 7788888887766666777766321 345667777764
No 22
>PRK01029 tolB translocation protein TolB; Provisional
Probab=60.72 E-value=50 Score=28.36 Aligned_cols=43 Identities=7% Similarity=0.107 Sum_probs=25.0
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeecccccc
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTFD 114 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~d 114 (136)
..|.| |.+.|+...+..+.+.+.++.++.- +.+...+|+|+.|
T Consensus 376 p~wSp-DG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~~ 427 (428)
T PRK01029 376 PSWAI-DSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAFPS 427 (428)
T ss_pred eEECC-CCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCCCC
Confidence 34444 5567776666555566666665321 3455667777654
No 23
>PRK04792 tolB translocation protein TolB; Provisional
Probab=60.37 E-value=54 Score=28.21 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=25.0
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF 113 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~ 113 (136)
+.|+| |.+.|+..++..|...+.++.++.. +.+-+.+|+|++
T Consensus 398 ps~sp-dG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~~~g~~~~p~Wsp~~ 448 (448)
T PRK04792 398 PSVAP-NGTMVIYSTTYQGKQVLAAVSIDGRFKARLPAGQGEVKSPAWSPFL 448 (448)
T ss_pred ceECC-CCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccCCCC
Confidence 34554 5667777777655555666665332 344566777763
No 24
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=56.66 E-value=19 Score=27.47 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=31.2
Q ss_pred CCceEEEecCCCCc--ccCccccCCCceEEEEEeecCCceEEEEeCCC-------ccceeeeecccccc
Q psy3031 55 GGGAFIVLPLNKSS--WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNK-------YHPALAVEWSLTFD 114 (136)
Q Consensus 55 gGG~~~Vlpls~~g--~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~-------~~~vld~~~~p~~d 114 (136)
.+..+..+.+.+.+ .|..|+|-+.+|+++..+ .. ..+.+.-+.- ..++-.|.|||.-.
T Consensus 47 ~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~-~~-~~v~lyd~~~~~i~~~~~~~~n~i~wsP~G~ 113 (194)
T PF08662_consen 47 KNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS-MP-AKVTLYDVKGKKIFSFGTQPRNTISWSPDGR 113 (194)
T ss_pred CCCccceeeccCCCceEEEEECcCCCEEEEEEcc-CC-cccEEEcCcccEeEeecCCCceEEEECCCCC
Confidence 34567777776654 688888866555444321 11 1233332211 14556677777653
No 25
>KOG0293|consensus
Probab=55.36 E-value=27 Score=31.12 Aligned_cols=43 Identities=28% Similarity=0.336 Sum_probs=32.8
Q ss_pred CccccCCCceEEEEEeec--------CCceEEEEeCCCccceeeeecccccc
Q psy3031 71 STFCAVNPKFLAIIVESA--------GGGAFIVLPLNKYHPALAVEWSLTFD 114 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~--------gGG~f~V~pl~~~~~vld~~~~p~~d 114 (136)
++|---|++|+|.++||+ .|=+++|++ .....|--++|||-+-
T Consensus 445 SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~Ls-GHs~~vNcVswNP~~p 495 (519)
T KOG0293|consen 445 SCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLS-GHSKTVNCVSWNPADP 495 (519)
T ss_pred eccCCCCcceEEecCCCceEEEEEccCCceeEeec-CCcceeeEEecCCCCH
Confidence 788888999999999987 455566655 3346778899999763
No 26
>PRK04922 tolB translocation protein TolB; Provisional
Probab=42.69 E-value=1.4e+02 Score=25.27 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=25.9
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeecccc
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLT 112 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~ 112 (136)
..|+ .|.++|+..++..|.+.+.++.++.. +.+-+.+|+|+
T Consensus 384 p~~s-pdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~~~~p~wsp~ 433 (433)
T PRK04922 384 PSFA-PNGSMVLYATREGGRGVLAAVSTDGRVRQRLVSADGEVREPAWSPY 433 (433)
T ss_pred ceEC-CCCCEEEEEEecCCceEEEEEECCCCceEEcccCCCCCCCCccCCC
Confidence 3443 35678888888766667777766432 34566677663
No 27
>KOG2315|consensus
Probab=35.30 E-value=55 Score=29.86 Aligned_cols=19 Identities=37% Similarity=0.632 Sum_probs=16.9
Q ss_pred EEEeCCCccceeeeecccc
Q psy3031 94 IVLPLNKYHPALAVEWSLT 112 (136)
Q Consensus 94 ~V~pl~~~~~vld~~~~p~ 112 (136)
.++||.+.+||-|+.|||-
T Consensus 263 ~~V~L~k~GPVhdv~W~~s 281 (566)
T KOG2315|consen 263 VSVPLLKEGPVHDVTWSPS 281 (566)
T ss_pred EEEecCCCCCceEEEECCC
Confidence 6789999999999999964
No 28
>KOG2055|consensus
Probab=34.35 E-value=98 Score=27.89 Aligned_cols=84 Identities=25% Similarity=0.266 Sum_probs=46.9
Q ss_pred ccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCC-CceEEEecCCCCcccCccccCCCceEEEEEe
Q psy3031 8 SSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAG-GGAFIVLPLNKSSWDSTFCAVNPKFLAIIVE 86 (136)
Q Consensus 8 ~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~g-GG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e 86 (136)
.+|++-.+|.. +..+....|+ -|++||+-..+.=++.+-.+. +--++-+++.-.-.|+.|..-...++|++
T Consensus 292 ~~k~~~~~g~e---~~~~e~FeVS---hd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~-- 363 (514)
T KOG2055|consen 292 VTKLKPPYGVE---EKSMERFEVS---HDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASG-- 363 (514)
T ss_pred cccccCCCCcc---cchhheeEec---CCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEc--
Confidence 45555555555 2334444443 467777665543333333322 23566667766668888885443344433
Q ss_pred ecCCceEEEEeCCCc
Q psy3031 87 SAGGGAFIVLPLNKY 101 (136)
Q Consensus 87 ~~gGG~f~V~pl~~~ 101 (136)
|=|.+-|.-|.+.
T Consensus 364 --~~GeV~v~nl~~~ 376 (514)
T KOG2055|consen 364 --GTGEVYVWNLRQN 376 (514)
T ss_pred --CCceEEEEecCCc
Confidence 3358888888775
No 29
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=34.15 E-value=3.1e+02 Score=23.70 Aligned_cols=60 Identities=15% Similarity=0.304 Sum_probs=44.0
Q ss_pred ccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc
Q psy3031 29 RVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY 101 (136)
Q Consensus 29 r~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~ 101 (136)
|-..++||...++.+.+|.-+.|-- +| +.++.++. |.+|+|+..- +.|+|.-.|.+....
T Consensus 166 rya~~~~d~~~v~ISGn~AYvA~~d-~G--L~ivDVSn--------p~sPvli~~~--n~g~g~~sv~vsdnr 225 (370)
T COG5276 166 RYALPGGDTHDVAISGNYAYVAWRD-GG--LTIVDVSN--------PHSPVLIGSY--NTGPGTYSVSVSDNR 225 (370)
T ss_pred eeccCCCCceeEEEecCeEEEEEeC-CC--eEEEEccC--------CCCCeEEEEE--ecCCceEEEEecCCe
Confidence 4455678888889999988888773 33 56777764 6778877544 677899899988775
No 30
>KOG0302|consensus
Probab=33.67 E-value=1.2e+02 Score=26.86 Aligned_cols=45 Identities=22% Similarity=0.382 Sum_probs=33.2
Q ss_pred CcccCccccCCCc--eEEEEEeecCCceEEEEeCCCc-------------cceeeeecccccc
Q psy3031 67 SSWDSTFCAVNPK--FLAIIVESAGGGAFIVLPLNKY-------------HPALAVEWSLTFD 114 (136)
Q Consensus 67 ~g~D~~f~p~n~~--~lAv~~e~~gGG~f~V~pl~~~-------------~~vld~~~~p~~d 114 (136)
...|.|-+.+|.+ +||++.++ |.+-|--|-+. +||.-|+|+|..|
T Consensus 301 h~sDVNVISWnr~~~lLasG~Dd---Gt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~ 360 (440)
T KOG0302|consen 301 HNSDVNVISWNRREPLLASGGDD---GTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHED 360 (440)
T ss_pred cCCceeeEEccCCcceeeecCCC---ceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccC
Confidence 3358887777765 68888775 47777665332 8999999999987
No 31
>KOG0647|consensus
Probab=33.53 E-value=47 Score=28.43 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=22.7
Q ss_pred ccCccccCCCceE-EEEEeecCCceEEEEeCCC------------ccceeeeeccc
Q psy3031 69 WDSTFCAVNPKFL-AIIVESAGGGAFIVLPLNK------------YHPALAVEWSL 111 (136)
Q Consensus 69 ~D~~f~p~n~~~l-Av~~e~~gGG~f~V~pl~~------------~~~vld~~~~p 111 (136)
-+..|+|-..++| |..|+. .+=+-.+++ .+||||+.|+-
T Consensus 31 S~l~FSP~~~~~~~A~SWD~----tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd 82 (347)
T KOG0647|consen 31 SALAFSPQADNLLAAGSWDG----TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD 82 (347)
T ss_pred heeEeccccCceEEecccCC----ceEEEEEecCCcccchhhhccCCCeEEEEEcc
Confidence 4567888666666 554441 222222222 28999999983
No 32
>KOG0973|consensus
Probab=32.97 E-value=35 Score=33.01 Aligned_cols=13 Identities=38% Similarity=0.480 Sum_probs=10.9
Q ss_pred ccceeeeecccccc
Q psy3031 101 YHPALAVEWSLTFD 114 (136)
Q Consensus 101 ~~~vld~~~~p~~d 114 (136)
.+.|+|+.|+| +|
T Consensus 129 ~~DV~Dv~Wsp-~~ 141 (942)
T KOG0973|consen 129 DSDVLDVNWSP-DD 141 (942)
T ss_pred CCccceeccCC-Cc
Confidence 38999999999 44
No 33
>KOG0273|consensus
Probab=31.99 E-value=1.6e+02 Score=26.58 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=47.1
Q ss_pred CCceeeCC-cEEEEeeecCCCceEEEecCCCCc-ccCccccCCCceEEEEEeecCCceEEEEeCCCc----------cce
Q psy3031 37 STFCAVNP-KFLAIIVESAGGGAFIVLPLNKSS-WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY----------HPA 104 (136)
Q Consensus 37 ~n~iaan~-kfiAv~~~~~gGG~~~Vlpls~~g-~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~----------~~v 104 (136)
++||.+.. .=..+.|++-.|-+...+++-... .|..|.-++. +|+++-+ |++-|..++.. ++|
T Consensus 288 G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~--F~ts~td---~~i~V~kv~~~~P~~t~~GH~g~V 362 (524)
T KOG0273|consen 288 GTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDE--FATSSTD---GCIHVCKVGEDRPVKTFIGHHGEV 362 (524)
T ss_pred CCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCce--EeecCCC---ceEEEEEecCCCcceeeecccCce
Confidence 55554333 455677776555677777776655 7788865544 5555443 58888888664 688
Q ss_pred eeeeccccc
Q psy3031 105 LAVEWSLTF 113 (136)
Q Consensus 105 ld~~~~p~~ 113 (136)
-.+.|||-.
T Consensus 363 ~alk~n~tg 371 (524)
T KOG0273|consen 363 NALKWNPTG 371 (524)
T ss_pred EEEEECCCC
Confidence 888888754
No 34
>KOG0264|consensus
Probab=31.56 E-value=52 Score=29.04 Aligned_cols=44 Identities=5% Similarity=0.092 Sum_probs=34.1
Q ss_pred ccCccccCCCceEEEEEeecCCceEEEEeCCC------------ccceeeeeccccccC
Q psy3031 69 WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNK------------YHPALAVEWSLTFDT 115 (136)
Q Consensus 69 ~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~------------~~~vld~~~~p~~d~ 115 (136)
-|..|.+.+...++.+.+++ .+.+.-+-+ +++|.-++||||++.
T Consensus 231 eDV~~h~~h~~lF~sv~dd~---~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ 286 (422)
T KOG0264|consen 231 EDVAWHPLHEDLFGSVGDDG---KLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEF 286 (422)
T ss_pred ehhhccccchhhheeecCCC---eEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCc
Confidence 48999999999999998864 555443321 179999999999973
No 35
>KOG1274|consensus
Probab=30.29 E-value=1.3e+02 Score=29.13 Aligned_cols=64 Identities=16% Similarity=0.285 Sum_probs=45.9
Q ss_pred EEEEeeecCCCceEEEecCCCCc-----------------------ccCccccCCCceEEEEEeecCCceEEEEeCC---
Q psy3031 46 FLAIIVESAGGGAFIVLPLNKSS-----------------------WDSTFCAVNPKFLAIIVESAGGGAFIVLPLN--- 99 (136)
Q Consensus 46 fiAv~~~~~gGG~~~Vlpls~~g-----------------------~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~--- 99 (136)
+.-..|+ +.||.+++.++...- .|..|+|. .+|||.+.-+ |.++|--.+
T Consensus 191 ~~~~aW~-Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn-G~YiAAs~~~---g~I~vWnv~t~~ 265 (933)
T KOG1274|consen 191 CTRLAWH-PKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN-GKYIAASTLD---GQILVWNVDTHE 265 (933)
T ss_pred eeeeeec-CCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC-CcEEeeeccC---CcEEEEecccch
Confidence 3345566 467888888876654 36788887 8899998654 468888776
Q ss_pred ---Cccceeeeecccccc
Q psy3031 100 ---KYHPALAVEWSLTFD 114 (136)
Q Consensus 100 ---~~~~vld~~~~p~~d 114 (136)
+..-|--++|-|+-+
T Consensus 266 ~~~~~~~Vc~~aw~p~~n 283 (933)
T KOG1274|consen 266 RHEFKRAVCCEAWKPNAN 283 (933)
T ss_pred hccccceeEEEecCCCCC
Confidence 446777788888765
No 36
>KOG1523|consensus
Probab=28.56 E-value=1.9e+02 Score=24.99 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=48.6
Q ss_pred CceeeCCcEEEEeeecCCCc----eEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc------------
Q psy3031 38 TFCAVNPKFLAIIVESAGGG----AFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY------------ 101 (136)
Q Consensus 38 n~iaan~kfiAv~~~~~gGG----~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~------------ 101 (136)
+...|+.-.=|+.|+...|| .+.++++++-++=.+|.|- .+.+||+ +|+=-+.|-=+|+.
T Consensus 69 rIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~-enkFAVg---Sgar~isVcy~E~ENdWWVsKhikkP 144 (361)
T KOG1523|consen 69 RIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPK-ENKFAVG---SGARLISVCYYEQENDWWVSKHIKKP 144 (361)
T ss_pred ceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCc-CceEEec---cCccEEEEEEEecccceehhhhhCCc
Confidence 44455555556778864454 5889999999988888886 5566776 22233454445553
Q ss_pred --cceeeeeccccc
Q psy3031 102 --HPALAVEWSLTF 113 (136)
Q Consensus 102 --~~vld~~~~p~~ 113 (136)
+.|+-++|-|.+
T Consensus 145 irStv~sldWhpnn 158 (361)
T KOG1523|consen 145 IRSTVTSLDWHPNN 158 (361)
T ss_pred cccceeeeeccCCc
Confidence 688999999877
No 37
>KOG2066|consensus
Probab=27.52 E-value=1.5e+02 Score=28.38 Aligned_cols=68 Identities=19% Similarity=0.341 Sum_probs=45.2
Q ss_pred eeeCCcEEEEeeecCCCceEEEecCCCCcccCcccc----CCCceEEEEEeecCCceEEEEeCCCc---------cceee
Q psy3031 40 CAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCA----VNPKFLAIIVESAGGGAFIVLPLNKY---------HPALA 106 (136)
Q Consensus 40 iaan~kfiAv~~~~~gGG~~~Vlpls~~g~D~~f~p----~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld 106 (136)
|+.+.+|+|+=.- .|.+-.....-+- +.+|+. -..+++|+|++|+ .+.|.-+..+ -|+..
T Consensus 45 ~av~~~~~~~GtH---~g~v~~~~~~~~~-~~~~~~s~~~~~Gey~asCS~DG---kv~I~sl~~~~~~~~~df~rpiks 117 (846)
T KOG2066|consen 45 CAVHDKFFALGTH---RGAVYLTTCQGNP-KTNFDHSSSILEGEYVASCSDDG---KVVIGSLFTDDEITQYDFKRPIKS 117 (846)
T ss_pred HHhhcceeeeccc---cceEEEEecCCcc-cccccccccccCCceEEEecCCC---cEEEeeccCCccceeEecCCccee
Confidence 4556788876533 3565555444333 556655 4578999999986 6677766443 58889
Q ss_pred eecccccc
Q psy3031 107 VEWSLTFD 114 (136)
Q Consensus 107 ~~~~p~~d 114 (136)
|++.|..-
T Consensus 118 ial~Pd~~ 125 (846)
T KOG2066|consen 118 IALHPDFS 125 (846)
T ss_pred EEeccchh
Confidence 99998854
No 38
>KOG1274|consensus
Probab=25.38 E-value=3.1e+02 Score=26.71 Aligned_cols=24 Identities=25% Similarity=0.530 Sum_probs=16.2
Q ss_pred CCceEEEEeCCCc---------------------cceeeeecccc
Q psy3031 89 GGGAFIVLPLNKY---------------------HPALAVEWSLT 112 (136)
Q Consensus 89 gGG~f~V~pl~~~---------------------~~vld~~~~p~ 112 (136)
=||.|+|.|++.+ +.+-|++|+|.
T Consensus 199 k~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 199 KGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN 243 (933)
T ss_pred CCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence 3567777777654 34678888876
No 39
>PRK01742 tolB translocation protein TolB; Provisional
Probab=25.37 E-value=3.4e+02 Score=22.94 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=20.3
Q ss_pred ccCccccCCCceEEEEEeecCCceEEEEeCC
Q psy3031 69 WDSTFCAVNPKFLAIIVESAGGGAFIVLPLN 99 (136)
Q Consensus 69 ~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~ 99 (136)
.+..|+| +.+.||..+...+...+.+..+.
T Consensus 207 ~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~ 236 (429)
T PRK01742 207 MSPAWSP-DGSKLAYVSFENKKSQLVVHDLR 236 (429)
T ss_pred ccceEcC-CCCEEEEEEecCCCcEEEEEeCC
Confidence 5678888 56777887765555566666664
No 40
>PRK04043 tolB translocation protein TolB; Provisional
Probab=24.63 E-value=4.5e+02 Score=22.55 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=14.5
Q ss_pred CccccCCCceEEEEEeecCCceEEEEeCC
Q psy3031 71 STFCAVNPKFLAIIVESAGGGAFIVLPLN 99 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~ 99 (136)
+.|+| |.++|+...+.++...+.++.++
T Consensus 373 p~~SP-DG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 373 PRFSS-DGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred eEECC-CCCEEEEEEccCCcEEEEEEecC
Confidence 34444 45556666555444445555553
No 41
>PRK05137 tolB translocation protein TolB; Provisional
Probab=24.37 E-value=3.5e+02 Score=22.82 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=20.9
Q ss_pred ccCccccCCCceEEEEEeecCCceEEEEeCC
Q psy3031 69 WDSTFCAVNPKFLAIIVESAGGGAFIVLPLN 99 (136)
Q Consensus 69 ~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~ 99 (136)
....|+| |.+.||..+...+.+.+.+..++
T Consensus 205 ~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~ 234 (435)
T PRK05137 205 LTPRFSP-NRQEITYMSYANGRPRVYLLDLE 234 (435)
T ss_pred EeeEECC-CCCEEEEEEecCCCCEEEEEECC
Confidence 3456777 66788888776666677777764
No 42
>KOG0269|consensus
Probab=23.72 E-value=1e+02 Score=29.35 Aligned_cols=43 Identities=19% Similarity=0.182 Sum_probs=32.1
Q ss_pred CccccCCCceEEEEE--------eecCCceEEEEeCCCccceeeeecccccc
Q psy3031 71 STFCAVNPKFLAIIV--------ESAGGGAFIVLPLNKYHPALAVEWSLTFD 114 (136)
Q Consensus 71 ~~f~p~n~~~lAv~~--------e~~gGG~f~V~pl~~~~~vld~~~~p~~d 114 (136)
-+|.| |-.+||++. +..++=++-.+.++.++||--++|-|..-
T Consensus 226 ~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~ 276 (839)
T KOG0269|consen 226 LNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARS 276 (839)
T ss_pred EeecC-CCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCcc
Confidence 57889 999999974 43344455555666679999999999874
No 43
>KOG2394|consensus
Probab=23.37 E-value=1e+02 Score=28.45 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=28.2
Q ss_pred cCccccCCCceEEEEEeecCCceEEEEeCCCc----------cceeeeecccc
Q psy3031 70 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY----------HPALAVEWSLT 112 (136)
Q Consensus 70 D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~----------~~vld~~~~p~ 112 (136)
.+.|.| +.++||+.+||+ -+=|+-.+.. +-.|-+.|+|.
T Consensus 295 ~f~FS~-DG~~LA~VSqDG---fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPD 343 (636)
T KOG2394|consen 295 EFAFSP-DGKYLATVSQDG---FLRIFDFDTQELLGVMKSYFGGLLCVCWSPD 343 (636)
T ss_pred ceeEcC-CCceEEEEecCc---eEEEeeccHHHHHHHHHhhccceEEEEEcCC
Confidence 578889 999999999986 4444433322 67788888874
No 44
>KOG0389|consensus
Probab=22.44 E-value=75 Score=30.61 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=13.4
Q ss_pred EeCCCccce--eeeecccccc
Q psy3031 96 LPLNKYHPA--LAVEWSLTFD 114 (136)
Q Consensus 96 ~pl~~~~~v--ld~~~~p~~d 114 (136)
|-|.--..| -|++||||+|
T Consensus 843 INLt~An~VIihD~dFNP~dD 863 (941)
T KOG0389|consen 843 INLTCANTVIIHDIDFNPYDD 863 (941)
T ss_pred ecccccceEEEeecCCCCccc
Confidence 444443333 7999999999
No 45
>PF09969 DUF2203: Uncharacterized conserved protein (DUF2203); InterPro: IPR018699 This family has no known function.
Probab=21.17 E-value=76 Score=22.94 Aligned_cols=23 Identities=35% Similarity=0.369 Sum_probs=16.4
Q ss_pred cCCCcceeeccCCCCceeeeecC
Q psy3031 114 DTSNGVMFPLYDPDTNLVYLCGK 136 (136)
Q Consensus 114 d~~~g~~~~~~d~d~~l~~~~~~ 136 (136)
|.+.||+-=-+.=|..-+|||||
T Consensus 75 d~~~gLvDFPa~~dg~~v~LCWk 97 (120)
T PF09969_consen 75 DLDPGLVDFPAKLDGREVYLCWK 97 (120)
T ss_pred CCcceeEeCCcccCCCEEEEEeC
Confidence 45667665556667788999997
No 46
>KOG2919|consensus
Probab=20.56 E-value=2.2e+02 Score=24.77 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=40.1
Q ss_pred eEEEecCCCCccc--------------------CccccCCCceEEEEEe--------ecCCceEEEEeCCCccceeeeec
Q psy3031 58 AFIVLPLNKSSWD--------------------STFCAVNPKFLAIIVE--------SAGGGAFIVLPLNKYHPALAVEW 109 (136)
Q Consensus 58 ~~~Vlpls~~g~D--------------------~~f~p~n~~~lAv~~e--------~~gGG~f~V~pl~~~~~vld~~~ 109 (136)
++-|+.++++|.| +.|.|.+++.+|+++- +-++++++++= ++.+-|.-+.|
T Consensus 180 cirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg-gh~gGvThL~~ 258 (406)
T KOG2919|consen 180 CIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG-GHGGGVTHLQW 258 (406)
T ss_pred eEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec-ccCCCeeeEEe
Confidence 5677777777743 6789999999999863 23556666544 66678888888
Q ss_pred ccccc
Q psy3031 110 SLTFD 114 (136)
Q Consensus 110 ~p~~d 114 (136)
+|+-+
T Consensus 259 ~edGn 263 (406)
T KOG2919|consen 259 CEDGN 263 (406)
T ss_pred ccCcC
Confidence 87653
Done!