RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy3035
         (161 letters)



>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc
           metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A
           {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A*
           2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A*
           2x95_A* 1j36_A* 1j37_A* 1j38_A
          Length = 598

 Score =  175 bits (443), Expect = 1e-52
 Identities = 67/139 (48%), Positives = 91/139 (65%)

Query: 1   MESIYSTAKICQHKNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRNHYK 60
           MES ++  K+C +K+   C+L L+PE+ E+   SRD EEL +YW EF  K+G  VR+ ++
Sbjct: 107 MESNFAKVKVCDYKDSTKCDLALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFE 166

Query: 61  QYVDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEK 120
           +YV+L  + A  NNFT  AE WLD Y+   F  Q+  ++  IRPLY QIH Y R RL + 
Sbjct: 167 RYVELNTKAAKLNNFTSGAEAWLDEYEDDTFEQQLEDIFADIRPLYQQIHGYVRFRLRKH 226

Query: 121 YGDKVVNRRGPIPAHLLGS 139
           YGD VV+  GPIP HLLG+
Sbjct: 227 YGDAVVSETGPIPMHLLGN 245


>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase,
           hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4
           NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A*
           2c6n_A* 2c6f_A*
          Length = 629

 Score =  167 bits (423), Expect = 1e-49
 Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 1   MESIYSTAKICQHKNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRNHYK 60
           M  IYSTAK+C  +    C  +L+P+LT I   SR    L   W  +   +G  ++  Y+
Sbjct: 118 MSRIYSTAKVCLPQKTATC-WSLDPDLTNILASSRSYAMLLFAWEGWHNAAGIPLKPLYE 176

Query: 61  QYVDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEK 120
            +  L NE   ++ FTD   YW   Y++P F D +  L+ Q+ PLYL +HA+ RR L+ +
Sbjct: 177 DFTALSNEAYKQDGFTDTGAYWRSWYNSPTFEDDLEHLYQQLEPLYLNLHAFVRRALHRR 236

Query: 121 YGDKVVNRRGPIPAHLLGS 139
           YGD+ +N RGPIPAHLLG 
Sbjct: 237 YGDRYINLRGPIPAHLLGD 255


>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor,
           enalaprilat, zinc dependant peptidase, anti-hypertensive
           drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB:
           1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A*
           2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
          Length = 589

 Score =  164 bits (416), Expect = 1e-48
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 3/139 (2%)

Query: 1   MESIYSTAKICQHKNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRNHYK 60
           ME+ YS A +C   +     L LEP+LT +   SR  E+L   W  +R K+G+ +   Y 
Sbjct: 106 METTYSVATVC---HPNGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYP 162

Query: 61  QYVDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEK 120
           +YV+L N+ A  N + DA + W   Y+TP     + +L+ +++PLYL +HAY RR L+  
Sbjct: 163 KYVELINQAARLNGYVDAGDSWRSMYETPSLEQDLERLFQELQPLYLNLHAYVRRALHRH 222

Query: 121 YGDKVVNRRGPIPAHLLGS 139
           YG + +N  GPIPAHLLG+
Sbjct: 223 YGAQHINLEGPIPAHLLGN 241


>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na
           open conformation, chloride ION binding site; HET: NAG;
           2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A
           3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A
           3scl_A
          Length = 615

 Score =  147 bits (372), Expect = 2e-42
 Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 1   MESIYSTAKICQHKNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRNHYK 60
           M +IYST K+C   N + C L LEP L EI   S D  E    W  +R + GKQ+R  Y+
Sbjct: 123 MSTIYSTGKVCNPDNPQEC-LLLEPGLNEIMANSLDYNERLWAWESWRSEVGKQLRPLYE 181

Query: 61  QYVDLENEVAVKNNFTDAAEYWLDAYDTP----------DFRDQVAKLWDQIRPLYLQIH 110
           +YV L+NE+A  N++ D  +YW   Y+               + V   +++I+PLY  +H
Sbjct: 182 EYVVLKNEMARANHYEDYGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLYEHLH 241

Query: 111 AYTRRRLNEKYGDKVVNRRGPIPAHLLGSCRQ 142
           AY R +L   Y   +    G +PAHLLG    
Sbjct: 242 AYVRAKLMNAYPSYIS-PIGCLPAHLLGDMWG 272


>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
           acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
           synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
          Length = 2006

 Score = 35.0 bits (80), Expect = 0.008
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 48/175 (27%)

Query: 1   MESI--YSTAKICQHKNEKNCNLTLEPELTEIFIG---SRD-------PEELRHYWTEFR 48
           M SI   +  ++  + N+ N +L   P   ++ I              P+ L       R
Sbjct: 338 MLSISNLTQEQVQDYVNKTNSHL---PAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLR 394

Query: 49  K---KSGK-QVRNHYKQYVDLENEVAVKNNF--TDA---AEYWLDAYDTPDFRDQVAKLW 99
           K    SG  Q R  + +      ++   N F    +   +   + A  +      + K  
Sbjct: 395 KAKAPSGLDQSRIPFSE-----RKLKFSNRFLPVASPFHSHLLVPA--SDLINKDLVKNN 447

Query: 100 DQIRPLYLQIHAY-TR-----RRLNEKYGDKVVN--RRGPI---------PAHLL 137
                  +QI  Y T      R L+    +++V+   R P+           H+L
Sbjct: 448 VSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHIL 502



 Score = 34.6 bits (79), Expect = 0.012
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 61   QYV----DL-ENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIR--PLYLQIH--A 111
            Q      DL +   A ++ +  A  ++ D Y    F      + D +   P+ L IH   
Sbjct: 1627 QEQGMGMDLYKTSKAAQDVWNRADNHFKDTY---GFS-----ILDIVINNPVNLTIHFGG 1678

Query: 112  YTRRRLNEKY 121
               +R+ E Y
Sbjct: 1679 EKGKRIRENY 1688



 Score = 31.9 bits (72), Expect = 0.081
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 41/163 (25%)

Query: 3   SIYSTAKICQHKNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRNHYKQY 62
           + +  A   Q + +   N  L PE TE F    +P        +F              Y
Sbjct: 25  ASFFIAS--QLQEQ--FNKIL-PEPTEGFAADDEPTTPAELVGKFL------------GY 67

Query: 63  VDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQ---IHAYTRRRLNE 119
           V    E +    F       L      +F +            YL+   IHA    +L +
Sbjct: 68  VSSLVEPSKVGQFDQVLNLCLT-----EFENC-----------YLEGNDIHALA-AKLLQ 110

Query: 120 KYGDKVVNRRGPIPAHLLGSCRQTTLEAEKPTKGA---APEEG 159
           +    +V  +  I  ++  +        +K +  A   A  EG
Sbjct: 111 ENDTTLVKTKELIKNYIT-ARIMAKRPFDKKSNSALFRAVGEG 152



 Score = 27.3 bits (60), Expect = 2.5
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 1    MESIYSTAKICQH---KNEKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKSGKQVRN 57
            M+ +Y T+K  Q    + + +   T    + +I     +P  L  +   F  + GK++R 
Sbjct: 1633 MD-LYKTSKAAQDVWNRADNHFKDTYGFSILDIV--INNPVNLTIH---FGGEKGKRIRE 1686

Query: 58   HYKQYV---DLENEVAVKNNFTDAAE 80
            +Y   +    ++ ++  +  F +  E
Sbjct: 1687 NYSAMIFETIVDGKLKTEKIFKEINE 1712


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
           programmed cell death; HET: DTP; 6.90A {Drosophila
           melanogaster} PDB: 3iz8_A*
          Length = 1221

 Score = 31.0 bits (69), Expect = 0.19
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 36/151 (23%)

Query: 16  EKNCNLTLEPELTEIFIGSRDPEELRHYWTEFRKKS--GKQVRNH----YKQYVDL---- 65
             + ++     L  +        ++     +  K S   KQ +         Y++L    
Sbjct: 382 PPSAHIP--TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439

Query: 66  ENEVAVKNNFTDAAEY-WLDAYD----TPDFRD--------------QVAKLWDQIRPLY 106
           ENE A+  +  D   Y     +D     P + D              +  +     R ++
Sbjct: 440 ENEYALHRSIVDH--YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 107 LQIHAYTRRRLNEKYGDKVVNRRGPIPAHLL 137
           L    +  +++  ++     N  G I   L 
Sbjct: 498 LDFR-FLEQKI--RHDSTAWNASGSILNTLQ 525



 Score = 30.6 bits (68), Expect = 0.27
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 11/82 (13%)

Query: 57  NHYKQYVDLE-NEVAVKNN-----FTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIH 110
           +H+  ++D E  E   +       F DA     D  D  D    +    ++I  + +   
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK-EEIDHIIMSKD 59

Query: 111 AYTR-RRLN---EKYGDKVVNR 128
           A +   RL        +++V +
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQK 81



 Score = 26.7 bits (58), Expect = 4.6
 Identities = 11/117 (9%), Positives = 34/117 (29%), Gaps = 20/117 (17%)

Query: 32  IGSRDPEELRHYWTEFRKKSGKQVRNHYKQYVDLENEVAVKNNFTDAA------------ 79
           I     + L   W  ++  +  ++    +  +++      +  F   +            
Sbjct: 333 IAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391

Query: 80  --EYWLDA--YDTPDFRDQVAK---LWDQIRPLYLQIHAYTRRRLNEKYGDKVVNRR 129
               W D    D     +++ K   +  Q +   + I +       +   +  ++R 
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448


>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio}
           PDB: 3e9d_A 3e9e_A
          Length = 265

 Score = 27.1 bits (60), Expect = 2.3
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 7   TAKI--CQHKNEKNCNLTLEPELTEIFIGS---RDPEELRHYWTEFRKKS 51
           TA+I    + +     + L+P L E   G    R  E L++      +  
Sbjct: 65  TAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAAGQSC 114


>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with
           oligonucleotide binding fold, central GTP binding
           domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5
           c.37.1.8
          Length = 307

 Score = 27.1 bits (61), Expect = 2.9
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 5/30 (16%)

Query: 24  EPELTEIFIGSRDPEELRHYWTEFRKKSGK 53
             E T+I     + EEL + + + R+KS  
Sbjct: 236 SLEFTDI-----EEEELGYTFPDIREKSSS 260


>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism,
           oxidoreductase, atomic RESO; HET: FAD; 0.92A
           {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A*
           1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A*
           1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
          Length = 504

 Score = 26.9 bits (59), Expect = 3.0
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 92  RDQVAKLWDQIRPLYLQIHAYTRRRL-NEKYGDKVVNRRGPIPAHLLGSCR 141
           RDQ A   +  + L+ +I+         + +G ++         H LG C 
Sbjct: 398 RDQNAPAVNAAKALFDRINKANGTIYRYDLFGTQLKAFADDFCYHPLGGCV 448


>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
           2.20A {Unidentified}
          Length = 309

 Score = 26.6 bits (59), Expect = 4.0
 Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 2/55 (3%)

Query: 36  DPEELRHYWTEFRKKSGKQ-VRNHYKQYVDLENEVAVKNNFTDAAEYWLDAYDTP 89
              E+  Y   F  +  +       ++ V +  E A           WL A   P
Sbjct: 185 SEAEMAAYRAPFPTRQSRLPTLQWPRE-VPIGGEPAFAEAEVLKNGEWLMASPIP 238


>2rfr_A Uncharacterized protein; structural genomics, joint center for
           structural genomics, J protein structure initiative,
           PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP:
           d.17.4.28
          Length = 155

 Score = 26.3 bits (58), Expect = 4.1
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 53  KQVRNHYKQYVDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIHA 111
           +++   Y    D  +  A+   + +  EY +  + T   R  +A L D      L    
Sbjct: 22  RELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALMADG 80


>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural
           genomics, joint center for structu genomics, JCSG; 2.05A
           {Pseudomonas putida} SCOP: a.25.1.7
          Length = 206

 Score = 26.1 bits (57), Expect = 5.1
 Identities = 9/48 (18%), Positives = 14/48 (29%)

Query: 38  EELRHYWTEFRKKSGKQVRNHYKQYVDLENEVAVKNNFTDAAEYWLDA 85
             L      F     K    HY+ Y+ L +    + +     E    A
Sbjct: 135 PHLDEELGRFYHGLLKSEARHYQGYLKLAHNYGDEADIARCVELVRAA 182


>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue;
           Zn-binding domain, rossmann fold domain; HET: MYK NAD;
           2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
          Length = 290

 Score = 26.1 bits (58), Expect = 6.1
 Identities = 6/29 (20%), Positives = 10/29 (34%), Gaps = 1/29 (3%)

Query: 89  PDFRDQVAKLWDQIRPLYLQ-IHAYTRRR 116
           P FR     +W +  P     I  + +  
Sbjct: 63  PSFRGSSNSIWSKYDPRIYGTIWGFWKYP 91


>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin,
           structural genomics, PSI, protein STR initiative; HET:
           MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
          Length = 220

 Score = 25.9 bits (56), Expect = 7.3
 Identities = 5/40 (12%), Positives = 19/40 (47%)

Query: 82  WLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEKY 121
           +++ + + +F + V ++   +  L  +   + + R  E +
Sbjct: 152 FINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVF 191


>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET:
           PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A*
           1to9_A* 1tyh_A
          Length = 263

 Score = 25.5 bits (55), Expect = 7.9
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 61  QYVDLENEVAVKNNFTDAAEYWLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEK 120
            Y ++  ++   +      + W+  Y    FR QV +  ++   L        R ++ E 
Sbjct: 165 LYYEVGEKLLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKEN 224

Query: 121 Y 121
           +
Sbjct: 225 F 225


>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
          photosynthetic reaction center, peripheral antenna;
          HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
          Length = 154

 Score = 25.3 bits (54), Expect = 8.2
 Identities = 7/25 (28%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 49 KKSGKQVRNHYKQYV-DLENEVAVK 72
          K++ K+++   K Y  D    +A+K
Sbjct: 19 KQALKKLQASLKLYADDSAPALAIK 43


>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A
           {Helicobacter pylori} PDB: 2rd3_A
          Length = 221

 Score = 25.4 bits (55), Expect = 8.4
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 59  YKQYVDLENEVAVKNNFTDAAEY--WLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRR 116
              Y+ +   ++   N  + A Y  W+  Y + +F+  V    + +  L L        +
Sbjct: 140 GWSYLVIAQNLSQIPNALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEK 199

Query: 117 LNEKY 121
           L E +
Sbjct: 200 LKEIF 204


>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain,
           TENA/THI-4/PQQC family, AT3G16990, struct genomics,
           protein structure initiative; HET: HMH; 2.10A
           {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
          Length = 221

 Score = 25.4 bits (55), Expect = 8.4
 Identities = 1/40 (2%), Positives = 7/40 (17%)

Query: 82  WLDAYDTPDFRDQVAKLWDQIRPLYLQIHAYTRRRLNEKY 121
               +    F+   + + +                  +  
Sbjct: 164 ACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVL 203


>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A
           {Coxiella burnetii}
          Length = 113

 Score = 25.0 bits (55), Expect = 8.4
 Identities = 6/30 (20%), Positives = 13/30 (43%), Gaps = 3/30 (10%)

Query: 99  WDQIRPLYLQIHAYTRRRLNE---KYGDKV 125
           WD  +P+Y Q+       + +     G+ +
Sbjct: 4   WDDKKPIYQQLRDKIVEAIIDGSYVEGEMI 33


>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
           {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
          Length = 316

 Score = 25.4 bits (56), Expect = 9.5
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 36  DPEELRHYWTEFRKKSGKQ-VRNHYKQYVDLENEVAVKNNFTDAAEYWLDAYDTP 89
             EE+  Y T F     ++ V    ++ + +  E A       +A   L A   P
Sbjct: 190 GDEEMAPYRTPFPTPESRRPVLAFPRE-LPIAGEPADVYEALQSAHAALAASSYP 243


>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic,
           complete proteome, direct protein sequencing, Fe4S4,
           iron, iron sulfur cluster; HET: 2MD MGD; 2.27A
           {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A*
           1fdo_A* 1aa6_A*
          Length = 715

 Score = 25.6 bits (57), Expect = 9.6
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 104 PLYLQIHAYTRRRLNEKYGD--KVVNRRGPI 132
           P Y QI+    +RL  +      V +R+G I
Sbjct: 605 PGYAQINTEDAKRLGIEDEALVWVHSRKGKI 635


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.316    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0747    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,563,385
Number of extensions: 147531
Number of successful extensions: 474
Number of sequences better than 10.0: 1
Number of HSP's gapped: 468
Number of HSP's successfully gapped: 49
Length of query: 161
Length of database: 6,701,793
Length adjustment: 86
Effective length of query: 75
Effective length of database: 4,300,587
Effective search space: 322544025
Effective search space used: 322544025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.2 bits)