RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3038
(499 letters)
>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 598
Score = 402 bits (1034), Expect = e-135
Identities = 191/450 (42%), Positives = 262/450 (58%), Gaps = 44/450 (9%)
Query: 31 LRRQYKMYSILGSAALPYEKFQKCLKANVQYRETFDRRRLNEKYGDKVVNRRGPIPAHLL 90
Y + F Q + R RL + YGD VV+ GPIP HLL
Sbjct: 179 AEAWLDEYEDDTFEQQLEDIFADIRPLYQQIHG-YVRFRLRKHYGDAVVSETGPIPMHLL 237
Query: 91 GNMWAQTWGNIYDIVVPYPEKTPPDVSAELVRQGYTVHKMFRTAEEFFTSINMSAMPPEF 150
GNMWAQ W I DIV P+PEK DVSAE+ +Q YT KMF+ ++FFTS+N++ +P +F
Sbjct: 238 GNMWAQQWSEIADIVSPFPEKPLVDVSAEMEKQAYTPLKMFQMGDDFFTSMNLTKLPQDF 297
Query: 151 WERSMLEKPQ-GREVVCHASAWDFHDGKDFRIKMCTRVNEEDLFTIHHEMGHVEYFIQYK 209
W++S++EKP GR++VCHASAWDF+ D RIK CTRV ++ LFT+HHE+GH++YF+QY+
Sbjct: 298 WDKSIIEKPTDGRDLVCHASAWDFYLIDDVRIKQCTRVTQDQLFTVHHELGHIQYFLQYQ 357
Query: 210 DQPMAFREGANPGKNTRGWTALKDGLSFYESWVAEIGLAGTVGSVVMRLLAMQKFVPFPL 269
QP +R GANPG F+E+ +G ++ + L + +
Sbjct: 358 HQPFVYRTGANPG--------------FHEA----VGDVLSLSVSTPKHLEKIGLLKDYV 399
Query: 270 VINRKFGIRTKINSDKTIFMVEAIFLFKIDTFLINTFVNI----MMDLWRWGVFKKDISH 325
+IN LF ++ V + MD +RW +F+ ++
Sbjct: 400 -----RDDEARIN-----------QLFLT---ALDKIVFLPFAFTMDKYRWSLFRGEVDK 440
Query: 326 EEYNKHWWKLRHDYQGVEPPTHRSEDDFDPGAKYHIVASVPYIRYFVSFVIQFQFHRALC 385
+N +WKLR +Y G+EPP RSE DFD AKYHI A V Y+RY VSF+IQFQF+++ C
Sbjct: 441 ANWNCAFWKLRDEYSGIEPPVVRSEKDFDAPAKYHISADVEYLRYLVSFIIQFQFYKSAC 500
Query: 386 EKAGEFDPNDPSKQPLHECDIYRSTEAGNLLKNMLAMGSSKPWPDAMEAITGQREMDASA 445
KAG++DP++ + PL CDIY S AG NML+MG+SKPWPDA+EA G+R M A
Sbjct: 501 IKAGQYDPDNV-ELPLDNCDIYGSARAGAAFHNMLSMGASKPWPDALEAFNGERIMSGKA 559
Query: 446 LLQYFEPLYKWLEEENARTGEHIGWEATDK 475
+ +YFEPL WLE EN + HIGW ++K
Sbjct: 560 IAEYFEPLRVWLEAENIKNNVHIGWITSNK 589
Score = 46.7 bits (110), Expect = 5e-06
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 4 SAEHAQFTKDQWKELIKYPWQTYSNQDLRRQYKMYSILGSAALPYEKFQKCLKANVQYRE 63
SAE A+F K+ + K+ W++Y ++DL+RQ+K + LG AALP + + + L
Sbjct: 44 SAELAKFMKEVASDTTKFQWRSYQSEDLKRQFKALTKLGYAALPEDDYAELLDTLSAMES 103
Query: 64 TF 65
F
Sbjct: 104 NF 105
>d1uzea_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Human
(Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 334 bits (858), Expect = e-109
Identities = 199/470 (42%), Positives = 268/470 (57%), Gaps = 44/470 (9%)
Query: 6 EHAQFTKDQWKELIKYPWQTYSN---QDLRRQYKMYSILGSAALPYEKFQKCLKANVQYR 62
+ + + + ++ Q D ++ S E+ + L+
Sbjct: 149 KAGRAILQFYPKYVELINQAARLNGYVDAGDSWRSMYETPSLEQDLERLFQELQPLYLNL 208
Query: 63 ETFDRRRLNEKYGDKVVNRRGPIPAHLLGNMWAQTWGNIYDIVVPYPEKTPPDVSAELVR 122
+ RR L+ YG + +N GPIPAHLLGNMWAQTW NIYD+VVP+P D + +++
Sbjct: 209 HAYVRRALHRHYGAQHINLEGPIPAHLLGNMWAQTWSNIYDLVVPFPSAPSMDTTEAMLK 268
Query: 123 QGYTVHKMFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRI 181
QG+T +MF+ A++FFTS+ + +PPEFW +SMLEKP GREVVCHASAWDF++GKDFRI
Sbjct: 269 QGWTPRRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRI 328
Query: 182 KMCTRVNEEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPGKNTRGWTALKDGLSFYESW 241
K CT VN EDL HHEMGH++YF+QYKD P+A REGANPG +
Sbjct: 329 KQCTTVNLEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG---------------FHEA 373
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAIFLFKIDTF 301
+ + + + + + L+ + IN +
Sbjct: 374 IGD--------VLALSVSTPKHLHSLNLLSSEGGSDEHDIN----------FLMKMALDK 415
Query: 302 LINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQGVEPPTHRSEDDFDPGAKYHI 361
+ + ++D WRW VF I+ E YN+ WW LR YQG+ PP R++ DFDPGAK+HI
Sbjct: 416 IAFIPFSYLVDQWRWRVFDGSITKENYNQEWWSLRLKYQGLCPPVPRTQGDFDPGAKFHI 475
Query: 362 VASVPYIRYFVSFVIQFQFHRALCEKAGEFDPNDPSKQPLHECDIYRSTEAGNLLKNMLA 421
+SVPYIRYFVSF+IQFQFH ALC+ AG P LH+CDIY+S EAG L +
Sbjct: 476 PSSVPYIRYFVSFIIQFQFHEALCQAAGHTGP-------LHKCDIYQSKEAGQRLATAMK 528
Query: 422 MGSSKPWPDAMEAITGQREMDASALLQYFEPLYKWLEEENARTGEHIGWE 471
+G S+PWP+AM+ ITGQ M ASA+L YF+PL WL EN GE +GW
Sbjct: 529 LGFSRPWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGWP 578
Score = 37.5 bits (86), Expect = 0.004
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 1 MNKSAEHAQFTKDQWKELIKYPWQTYSNQDLRRQYKMYSILGSAALPYEKFQK 53
+ K+ + A T + K+ N ++R K L AALP ++ ++
Sbjct: 43 LQKNMQIANHTLKYGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEE 95
>d2ajfa1 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2, ACE2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 597
Score = 324 bits (831), Expect = e-105
Identities = 139/420 (33%), Positives = 210/420 (50%), Gaps = 44/420 (10%)
Query: 55 LKANVQYRETFDRRRLNEKYGDKVVNRRGPIPAHLLGNMWAQTWGNIYDIVVPYPEKTPP 114
+K ++ + R +L Y + G +PAHLLG+MW + W N+Y + VP+ +K
Sbjct: 215 IKPLYEHLHAYVRAKLMNAYPSYIS-PIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNI 273
Query: 115 DVSAELVRQGYTVHKMFRTAEEFFTSINMSAMPPEFWERSMLEKPQ-GREVVCHASAWDF 173
DV+ +V Q + ++F+ AE+FF S+ + M FWE SML P ++ VCH +AWD
Sbjct: 274 DVTDAMVDQAWDAQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDL 333
Query: 174 HDGKDFRIKMCTRVNEEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPGKNTRGWTALKD 233
DFRI MCT+V +D T HHEMGH++Y + Y QP R GAN G
Sbjct: 334 -GKGDFRILMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG----------- 381
Query: 234 GLSFYESWVAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAI 293
F+E V ++++ P L + G+ + + + +
Sbjct: 382 ---FHE--------------AVGEIMSLSAATPKHL---KSIGLLSPDFQEDNETEINFL 421
Query: 294 FLFKIDTFLINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQGVEPPTHRSEDDF 353
+ F M++ WRW VFK +I +++ K WW+++ + GV P E
Sbjct: 422 LKQALTIVGTLPFT-YMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVGVVEPVPHDETYC 480
Query: 354 DPGAKYHIVASVPYIRYFVSFVIQFQFHRALCEKAGEFDPNDPSKQPLHECDIYRSTEAG 413
DP + +H+ +IRY+ + QFQF ALC+ A PLH+CDI STEAG
Sbjct: 481 DPASLFHVSNDYSFIRYYTRTLYQFQFQEALCQAAKHEG-------PLHKCDISNSTEAG 533
Query: 414 NLLKNMLAMGSSKPWPDAMEAITGQREMDASALLQYFEPLYKWLEEENARTGEHIGWEAT 473
L NML +G S+PW A+E + G + M+ LL YFEPL+ WL+++N +GW
Sbjct: 534 QKLFNMLRLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 591
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 497
Score = 182 bits (463), Expect = 3e-52
Identities = 58/488 (11%), Positives = 135/488 (27%), Gaps = 87/488 (17%)
Query: 7 HAQFTKDQWKELIKY--------PWQTYSNQDLRRQYKM-----------YSILGSAAL- 46
H ++ L++ ++ + L R ++ S S A
Sbjct: 56 HELLLHPEFVNLVEKAKGLENLNEYERGIVRVLDRSIRIARAFPPEFIREVSETTSLATK 115
Query: 47 ---------PYEKFQKCLKANVQYRETFDRRRLNE--KYGDKVVNRRGPIPAHLLGNMWA 95
+ KF+ L + + E Y + + + M+
Sbjct: 116 AWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFE 175
Query: 96 QTWGNIYDIVVPYPEKTPPDVSAELVRQGYTVHKMFRTAEEFFTSINMSAMPPEFWERSM 155
+ ++ E+ L ++ Y M R
Sbjct: 176 VLEKKLKPLLDKILEEGKVPREHPLEKEKYEREWMERVNLWILQKFGFPL---------- 225
Query: 156 LEKPQGREVVCHASAWDFHDGKDFRIKMCTRVNE--EDLFTIHHEMGHVEYFI----QYK 209
+ R V +D RI + + + HE GH Y + ++
Sbjct: 226 --GTRARLDVSAHPFTTEFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFM 283
Query: 210 DQPMAFREGANPGKNTRGWTALKDGLSFYESWVAEIGLAGTVGSVVMRLLA-MQKFVPFP 268
P+A G + G +E + +++ R ++ P
Sbjct: 284 FTPIA--GGVSLG--------------IHE------SQSRFWENIIGRSKEFVELIYPVL 321
Query: 269 LVINRKFGIRTKINSDKTIFMVEAIFLFKI-DTFLINTFVNIMMDLWRWGVFKKDISHEE 327
T + +V F+ D N + + L R + ++I ++
Sbjct: 322 KENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERL-MVSEEIKAKD 380
Query: 328 YNKHWWKLRHDYQGVEPPTHRSEDDFDPGAKYHIVASVPYIRYFVSFVIQFQFHRALCEK 387
+ W G+ P + + + + + Y + ++ Q + + +
Sbjct: 381 LPEMWNDEMERLLGIRPRKYS--EGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKD 438
Query: 388 AGEFDPNDPSKQPLHECDIYRSTEAGNLLKNML-AMGSSKPWPDAMEAITGQREMDASAL 446
+F+ + L+ + GS P + ++ G+ +MDA
Sbjct: 439 IPDFE---------EKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIGE-DMDAEYF 488
Query: 447 LQYFEPLY 454
+++ + Y
Sbjct: 489 VRWVKEKY 496
>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 168
Score = 28.1 bits (62), Expect = 1.6
Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 6/76 (7%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQK-----FVPFPLVINRKFGIRTKINSDKTIFMVEAIFLF 296
VA IG G VGS + L K + R + + A+
Sbjct: 7 VAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAAS 65
Query: 297 KIDTFLINTFVNIMMD 312
T ++ + +
Sbjct: 66 TTKTLPLDDLIAHLKT 81
>d2g17a1 c.2.1.3 (A:1-153,A:309-334)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Salmonella typhimurium [TaxId: 90371]}
Length = 179
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/147 (6%), Positives = 34/147 (23%), Gaps = 4/147 (2%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAIFLFKIDTF 301
+G +G G+ ++ + + + ++ I +
Sbjct: 4 TLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM 63
Query: 302 LINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQGVEPPTHRSEDDFDPGAKYHI 361
+ +D+ + + + + + +D KY+
Sbjct: 64 SDVRDFSADVDVVFLATAHEV--SHDLAPQFLQ--AGCVVFDLSGAFRVNDRAFYEKYYG 119
Query: 362 VASVPYIRYFVSFVIQFQFHRALCEKA 388
+ +++ A
Sbjct: 120 FTHQYPELLEQAVYGLAEWNVDKLNTA 146
>d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId:
562]}
Length = 416
Score = 28.4 bits (63), Expect = 2.2
Identities = 16/95 (16%), Positives = 24/95 (25%), Gaps = 12/95 (12%)
Query: 85 IPAHLLGNMWAQTWGNIYDIVVPYPEKTPPDVSAELVRQGY------------TVHKMFR 132
I A G + A ++ +KT +L GY MF
Sbjct: 304 IHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFD 363
Query: 133 TAEEFFTSINMSAMPPEFWERSMLEKPQGREVVCH 167
A + M + + G V H
Sbjct: 364 LANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSH 398
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor
large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}
Length = 203
Score = 27.1 bits (60), Expect = 4.1
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 180 RIKMCTRVNEEDLFTIHHEMGHVEYFIQYKDQPMA 214
IK E LF + HE G V++F P+
Sbjct: 57 EIKKYPLAKVESLFHLRHEDGSVQFF----STPLP 87
>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde
dehydrogenase {Vibrio cholerae [TaxId: 666]}
Length = 147
Score = 26.6 bits (58), Expect = 4.2
Identities = 13/93 (13%), Positives = 26/93 (27%), Gaps = 8/93 (8%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAIFLFKIDTF 301
V +G G VGSV+M+ + ++ F L+ F + D
Sbjct: 3 VGLVGWRGMVGSVLMQRMVEER--DFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIE 60
Query: 302 LINTFVNIMMDLWRWGVFKKDISHEEYNKHWWK 334
+ ++ + + Y
Sbjct: 61 SLKQLDAVITCQ------GGSYTEKVYPALRQA 87
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 202
Score = 27.0 bits (60), Expect = 4.4
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 180 RIKMCTRVNEEDLFTIHHEMGHVEYFIQYKDQPMA 214
IK E LF+I HE G VE+F + ++
Sbjct: 57 AIKKYPLAKVESLFSIRHENGAVEFF----REALS 87
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde
dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}
Length = 183
Score = 26.9 bits (58), Expect = 4.7
Identities = 12/111 (10%), Positives = 29/111 (26%), Gaps = 12/111 (10%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAIFLFKIDTF 301
+A +G +G G+ ++RLLA ++ + + + + L +
Sbjct: 8 IAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDA 67
Query: 302 LIN------------TFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQ 340
+ T I+ L + +
Sbjct: 68 DFSNVDAVFCCLPHGTTQEIIKGLPQELKIVDLSADFRLRDINEYAEWYGH 118
>d1pj5a4 d.250.1.1 (A:428-742) N,N-dimethylglycine oxidase domain 3
{Arthrobacter globiformis [TaxId: 1665]}
Length = 315
Score = 26.5 bits (57), Expect = 7.2
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 452 PLYKWLEEENARTGEHIGWE 471
P + +E A E GWE
Sbjct: 7 PFHARHKELGAFFLEAGGWE 26
>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 144
Score = 25.9 bits (56), Expect = 7.9
Identities = 16/126 (12%), Positives = 27/126 (21%), Gaps = 7/126 (5%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFV---PFPLVINRKFGIRTKINSDKTIFMVEAIFLFKI 298
VA +G G+VG ++ LL + F L G R F F
Sbjct: 5 VAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSS 64
Query: 299 DTFLINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQGVEPPTHRSEDDFDPGAK 358
+ + + A
Sbjct: 65 VGLAFFAAAAEVSRAHAERARAAGC-SVIDLSGALEPSVAPPVMVSVNAERLASQ---AA 120
Query: 359 YHIVAS 364
+++S
Sbjct: 121 PFLLSS 126
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic,
hybrid between Bacillus amyloliquefaciens and Bacillus
macerans proteins}
Length = 214
Score = 26.4 bits (57), Expect = 8.0
Identities = 11/88 (12%), Positives = 24/88 (27%)
Query: 276 GIRTKINSDKTIFMVEAIFLFKIDTFLINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKL 335
+ + + E +T ++++F + DI + +
Sbjct: 61 CAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQF 120
Query: 336 RHDYQGVEPPTHRSEDDFDPGAKYHIVA 363
+ GV FD +H A
Sbjct: 121 NYYTNGVGGHEKVISLGFDASKGFHTYA 148
>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 146
Score = 25.8 bits (56), Expect = 8.2
Identities = 19/120 (15%), Positives = 32/120 (26%), Gaps = 12/120 (10%)
Query: 242 VAEIGLAGTVGSVVMRLLAMQKFVPFPLVINRKFGIRTKINSDKTIFMVEAIFLFKIDTF 301
V IG G VGSV+M+ + ++ F + F + T
Sbjct: 4 VGFIGWRGMVGSVLMQRMVEER--DFDAIRPVFFSTSQLGQA----------APSFGGTT 51
Query: 302 LINTFVNIMMDLWRWGVFKKDISHEEYNKHWWKLRHDYQGVEPPTHRSEDDFDPGAKYHI 361
+ L + + N+ + KLR S A +
Sbjct: 52 GTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIIL 111
>d1b24a2 d.95.2.1 (A:100-179) DNA endonuclease I-dmoI {Archaeon
Desulfurococcus mobilis [TaxId: 2274]}
Length = 80
Score = 24.5 bits (53), Expect = 9.3
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 217 EGANPGKNTRGWTALKDGLSFYESWVAEIGLAGTV 251
EG K R W K L W+ +G+ T+
Sbjct: 18 EGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTI 52
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.431
Gapped
Lambda K H
0.267 0.0483 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,030,835
Number of extensions: 100147
Number of successful extensions: 278
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 36
Length of query: 499
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 410
Effective length of database: 1,185,626
Effective search space: 486106660
Effective search space used: 486106660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.6 bits)