BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3039
(118 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NXQ|A Chain A, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
pdb|3NXQ|B Chain B, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
Length = 629
Score = 153 bits (386), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/94 (71%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MFR AEEFFTS+ +S MPPEFWE SMLEKP GREVVCHASAWDF++ KDFRIK CTRV
Sbjct: 293 MFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTRVT 352
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+ L T+HHEMGH++Y++QYKD P++ R GANPG
Sbjct: 353 MDQLSTVHHEMGHIQYYLQYKDLPVSLRRGANPG 386
>pdb|2XYD|A Chain A, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
pdb|2XYD|B Chain B, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
Length = 610
Score = 152 bits (385), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/94 (71%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MFR AEEFFTS+ +S MPPEFWE SMLEKP GREVVCHASAWDF++ KDFRIK CTRV
Sbjct: 293 MFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTRVT 352
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+ L T+HHEMGH++Y++QYKD P++ R GANPG
Sbjct: 353 MDQLSTVHHEMGHIQYYLQYKDLPVSLRRGANPG 386
>pdb|2C6N|A Chain A, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain With Lisinopril
pdb|2C6N|B Chain B, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain With Lisinopril
pdb|2C6F|A Chain A, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain
pdb|2C6F|B Chain B, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain
Length = 612
Score = 152 bits (385), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/94 (71%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MFR AEEFFTS+ +S MPPEFWE SMLEKP GREVVCHASAWDF++ KDFRIK CTRV
Sbjct: 293 MFRVAEEFFTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTRVT 352
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+ L T+HHEMGH++Y++QYKD P++ R GANPG
Sbjct: 353 MDQLSTVHHEMGHIQYYLQYKDLPVSLRRGANPG 386
>pdb|3BKK|A Chain A, Tesis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaf
pdb|3BKL|A Chain A, Testis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaw
pdb|3L3N|A Chain A, Testis Ace Co-Crystal Structure With Novel Inhibitor Lisw
Length = 591
Score = 152 bits (384), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/94 (70%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW++SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWQKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|2IUX|A Chain A, Human Tace Mutant G1234
Length = 591
Score = 152 bits (384), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/94 (70%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW++SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWQKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|2IUL|A Chain A, Human Tace G13 Mutant
Length = 591
Score = 152 bits (384), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/94 (70%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW++SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWQKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|2YDM|A Chain A, Structural Characterization Of Angiotensin-I Converting
Enzyme In Complex With A Selenium Analogue Of Captopril
Length = 589
Score = 151 bits (381), Expect = 9e-38, Method: Composition-based stats.
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW +SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|1O8A|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
(Native).
pdb|1UZF|A Chain A, Complex Of The Anti-Hypertensive Drug Captopril An The
Human Testicular Angiotensin I-Converting Enzyme
pdb|4APH|A Chain A, Human Angiotensin-Converting Enzyme In Complex With
Angiotensin-Ii
pdb|4APJ|A Chain A, Human Angiotensin-Converting Enzyme In Complex With Bppb
pdb|1O86|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
In Complex With Lisinopril.
pdb|1UZE|A Chain A, Complex Of The Anti-hypertensive Drug Enalaprilat And The
Human Testicular Angiotensin I-converting Enzyme
Length = 589
Score = 151 bits (381), Expect = 9e-38, Method: Composition-based stats.
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW +SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|2OC2|A Chain A, Structure Of Testis Ace With Rxpa380
Length = 591
Score = 151 bits (381), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW +SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 279 MFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 338
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 339 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 372
>pdb|2XY9|A Chain A, Human Angiotensin Converting Enzyme In Complex With
Phosphinic Tripeptide
Length = 585
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ A++FFTS+ + +PPEFW +SMLEKP GREVVCHASAWDF++GKDFRIK CT VN
Sbjct: 276 MFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVN 335
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
EDL HHEMGH++YF+QYKD P+A REGANPG
Sbjct: 336 LEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG 369
>pdb|2X92|A Chain A, Crystal Structure Of Ance-Ramiprilat Complex
pdb|2X93|A Chain A, Crystal Structure Of Ance-Trandolaprilat Complex
pdb|2X94|A Chain A, Crystal Structure Of Ance-Perindoprilat Complex
pdb|2X95|A Chain A, Crystal Structure Of Ance-Lisinopril-Tryptophan Analogue,
Lisw-S Complex
Length = 599
Score = 134 bits (338), Expect = 9e-33, Method: Composition-based stats.
Identities = 53/94 (56%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ ++FFTS+N++ +P +FW++S++EKP GR++VCHASAWDF+ D RIK CTRV
Sbjct: 283 MFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLTDDVRIKQCTRVT 342
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
++ LFT+HHE+GH++YF+QY+ QP +R GANPG
Sbjct: 343 QDQLFTVHHELGHIQYFLQYQHQPFVYRTGANPG 376
>pdb|2X8Y|A Chain A, Crystal Structure Of Ance
pdb|2X8Z|A Chain A, Crystal Structure Of Ance-Captopril Complex
pdb|2X90|A Chain A, Crystal Structure Of Ance-Enalaprilat Complex
pdb|2X91|A Chain A, Crystal Structure Of Ance-Lisinopril Complex
pdb|2X96|A Chain A, Crystal Structure Of Ance-Rxpa380 Complex
pdb|2X97|A Chain A, Crystal Structure Of Ance-Rxp407 Complex
pdb|2XHM|A Chain A, Crystal Structure Of Ance-K26 Complex
pdb|3ZQZ|A Chain A, Crystal Structure Of Ance In Complex With A Selenium
Analogue Of Captopril
pdb|4AA1|A Chain A, Crystal Structure Of Ance In Complex With Angiotensin-Ii
pdb|4AA2|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
Potentiating Peptide B
pdb|4ASQ|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
pdb|4ASR|A Chain A, Crystal Structure Of Ance In Complex With Thr6-Bradykinin
Length = 598
Score = 134 bits (338), Expect = 9e-33, Method: Composition-based stats.
Identities = 53/94 (56%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ ++FFTS+N++ +P +FW++S++EKP GR++VCHASAWDF+ D RIK CTRV
Sbjct: 283 MFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLTDDVRIKQCTRVT 342
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
++ LFT+HHE+GH++YF+QY+ QP +R GANPG
Sbjct: 343 QDQLFTVHHELGHIQYFLQYQHQPFVYRTGANPG 376
>pdb|1J36|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J36|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J37|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J37|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J38|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J38|B Chain B, Crystal Structure Of Drosophila Ance
Length = 607
Score = 133 bits (334), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/94 (56%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKP-QGREVVCHASAWDFHDGKDFRIKMCTRVN 59
MF+ ++FFTS+N++ +P +FW++S++EKP GR++VCHASAWDF+ D RIK CTRV
Sbjct: 286 MFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLIDDVRIKQCTRVT 345
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
++ LFT+HHE+GH++YF+QY+ QP +R GANPG
Sbjct: 346 QDQLFTVHHELGHIQYFLQYQHQPFVYRTGANPG 379
>pdb|1R42|A Chain A, Native Human Angiotensin Converting Enzyme-related
Carboxypeptidase (ace2)
pdb|1R4L|A Chain A, Inhibitor Bound Human Angiotensin Converting
Enzyme-Related Carboxypeptidase (Ace2)
Length = 615
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKPQG-REVVCHASAWDFHDGKDFRIKMCTRVN 59
+F+ AE+FF S+ + M FWE SML P ++ VCH +AWD G DFRI MCT+V
Sbjct: 307 IFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMCTKVT 365
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+D T HHEMGH++Y + Y QP R GAN G
Sbjct: 366 MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG 399
>pdb|2AJF|A Chain A, Structure Of Sars Coronavirus Spike Receptor-Binding
Domain Complexed With Its Receptor
pdb|2AJF|B Chain B, Structure Of Sars Coronavirus Spike Receptor-Binding
Domain Complexed With Its Receptor
pdb|3KBH|A Chain A, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|B Chain B, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|C Chain C, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|D Chain D, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
Length = 597
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKPQG-REVVCHASAWDFHDGKDFRIKMCTRVN 59
+F+ AE+FF S+ + M FWE SML P ++ VCH +AWD G DFRI MCT+V
Sbjct: 289 IFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMCTKVT 347
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+D T HHEMGH++Y + Y QP R GAN G
Sbjct: 348 MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG 381
>pdb|3SCI|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Human Strain Complexed
With Human Receptor Ace2
pdb|3SCI|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Human Strain Complexed
With Human Receptor Ace2
pdb|3SCJ|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human Receptor Ace2
pdb|3SCJ|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human Receptor Ace2
Length = 603
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKPQG-REVVCHASAWDFHDGKDFRIKMCTRVN 59
+F+ AE+FF S+ + M FWE SML P ++ VCH +AWD G DFRI MCT+V
Sbjct: 289 IFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMCTKVT 347
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+D T HHEMGH++Y + Y QP R GAN G
Sbjct: 348 MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG 381
>pdb|3SCK|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human-Civet Chimeric Receptor Ace2
pdb|3SCK|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human-Civet Chimeric Receptor Ace2
pdb|3SCL|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From Sars Coronavirus Epidemic Strain Complexed With
Human-Civet Chimeric Receptor Ace2
pdb|3SCL|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From Sars Coronavirus Epidemic Strain Complexed With
Human-Civet Chimeric Receptor Ace2
Length = 603
Score = 99.0 bits (245), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKPQG-REVVCHASAWDFHDGKDFRIKMCTRVN 59
+F+ AE+FF S+ + M FWE SML P ++ VCH +AWD G DFRI MCT+V
Sbjct: 289 IFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMCTKVT 347
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+D T HHEMGH++Y + Y QP R GAN G
Sbjct: 348 MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG 381
>pdb|3D0G|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Human Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0G|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Human Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0H|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0H|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0I|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2005-2006 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0I|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2005-2006 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
Length = 597
Score = 99.0 bits (245), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 1 MFRTAEEFFTSINMSAMPPEFWERSMLEKPQG-REVVCHASAWDFHDGKDFRIKMCTRVN 59
+F+ AE+FF S+ + M FWE SML P ++ VCH +AWD G DFRI MCT+V
Sbjct: 289 IFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKG-DFRILMCTKVT 347
Query: 60 EEDLFTIHHEMGHVEYFIQYKDQPMAFREGANPG 93
+D T HHEMGH++Y + Y QP R GAN G
Sbjct: 348 MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEG 381
>pdb|3TED|A Chain A, Crystal Structure Of The Chd1 Dna-Binding Domain In
Complex With A Dna Duplex
Length = 271
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 50 FRIKMCTRVNEEDLFTIHHEMGHVEYFIQ--YKDQPMAFREGANPGKNTRGWVA 101
F K +N E L + ++ +++ I YKD P+ F G N K + W +
Sbjct: 117 FNFKGVKSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSS 170
>pdb|2XB0|X Chain X, Dna-Binding Domain From Saccharomyces Cerevisiae
Chromatin- Remodelling Protein Chd1
Length = 270
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 50 FRIKMCTRVNEEDLFTIHHEMGHVEYFIQ--YKDQPMAFREGANPGKNTRGWVA 101
F K +N E L + ++ +++ I YKD P+ F G N K + W +
Sbjct: 116 FNFKGVKSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSS 169
>pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From
Bacteroides Thetaiotaomicron
Length = 612
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 12 INMSAMPPEFWERSMLE-KPQGREVVCHASAWDFHDGKDFR 51
I+ +P E+WE + K G +C W+FH+ ++ R
Sbjct: 29 IHYPRIPKEYWEHRIKXCKALGXNTICLYVFWNFHEPEEGR 69
>pdb|1NBW|A Chain A, Glycerol Dehydratase Reactivase
pdb|1NBW|C Chain C, Glycerol Dehydratase Reactivase
Length = 607
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 61 EDLFTIHHEMGHVEYF 76
E LF+I HE G VE+F
Sbjct: 472 ESLFSIRHENGAVEFF 487
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,914,159
Number of Sequences: 62578
Number of extensions: 151135
Number of successful extensions: 506
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 459
Number of HSP's gapped (non-prelim): 28
length of query: 118
length of database: 14,973,337
effective HSP length: 81
effective length of query: 37
effective length of database: 9,904,519
effective search space: 366467203
effective search space used: 366467203
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)