Query psy3043
Match_columns 731
No_of_seqs 349 out of 1483
Neff 4.3
Searched_HMMs 29240
Date Sat Aug 17 00:03:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v60_A BOLA1, riken cDNA 18100 99.9 3.7E-22 1.3E-26 185.6 12.6 108 562-684 3-113 (123)
2 2dhm_A Protein BOLA; stationar 99.9 5.7E-22 1.9E-26 180.4 8.6 85 588-683 9-95 (107)
3 2kdn_A Putative uncharacterize 99.8 1.6E-18 5.6E-23 157.9 9.5 77 589-683 25-103 (108)
4 3o2e_A BOLA-like protein; ssgc 99.8 5.5E-19 1.9E-23 160.2 5.9 76 589-682 24-101 (105)
5 1v9j_A BOLA-like protein riken 99.7 1.5E-18 5E-23 159.3 6.0 76 590-682 32-109 (113)
6 3tr3_A BOLA; cellular processe 99.7 4.4E-17 1.5E-21 142.0 7.4 74 589-682 6-81 (82)
7 2kz0_A BOLA family protein; BO 99.7 3.8E-17 1.3E-21 140.5 5.8 66 590-676 8-75 (76)
8 1xs3_A Hypothetical protein XC 99.7 5.8E-17 2E-21 140.6 6.7 72 589-680 7-80 (80)
9 1ny8_A Protein YRBA; structure 99.6 1.2E-16 4.3E-21 143.1 7.2 72 591-683 9-83 (97)
10 2ki9_A Cannabinoid receptor 2; 27.6 4.2 0.00014 28.6 -2.6 20 243-262 5-24 (33)
11 4grv_A Neurotensin receptor ty 26.2 39 0.0013 36.4 3.5 24 239-262 404-427 (510)
No 1
>1v60_A BOLA1, riken cDNA 1810037G04; stationary phase morphogene, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.87 E-value=3.7e-22 Score=185.57 Aligned_cols=108 Identities=27% Similarity=0.382 Sum_probs=88.2
Q ss_pred ccccccccc-ccccCCCCCccccCChhHHHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEE
Q psy3043 562 DGTSRMASK-RVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLI 640 (731)
Q Consensus 562 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~I 640 (731)
.|.+||+.+ .+-++-.-+ ....+++++|+++|+++| +|.+| +|+|||+.|+||. |||+||+|+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~I~~~L~~~l-~p~~l-------~V~DeS~~H~~~~---G~gsHf~v~I 67 (123)
T 1v60_A 3 SGSSGMATRSCVSRGSAGS----AAAGPVEAAIRAKLEQAL-SPEVL-------ELRNESGGHAVPA---GSETHFRVAV 67 (123)
T ss_dssp SSSCCCCCCCCCCCSCCCC----SSSCHHHHHHHHHHHHHT-CCSEE-------EEEECCCSSSCCT---TCCSEEEEEE
T ss_pred CcchhhhhhhhhhhhccCC----CCCCcHHHHHHHHHHhhC-CCeEE-------EEEECcccccCCC---CCCCeEEEEE
Confidence 466777665 232322211 234668899999999996 99998 9999999999874 7899999999
Q ss_pred ECcCCCCCCHHHHHHH--HHhHHHhcCCCceeeeeccchhhhhhhe
Q psy3043 641 VSDKFEGKGILQRHRK--ETYKKERRSPGKQEGVGSNPAKAWNFIL 684 (731)
Q Consensus 641 VS~~F~G~s~v~RHR~--~aL~~ei~~~i~~~~~~~~~~~~w~~~~ 684 (731)
||++|+||++|+|||+ ++|+|+|+++||++++.+.|.+||++..
T Consensus 68 VS~~F~Gks~v~RHRlVy~aL~~ei~~~IHALsi~t~TP~Ew~~~~ 113 (123)
T 1v60_A 68 VSSRFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKTPAQWRENP 113 (123)
T ss_dssp ECGGGTTCCHHHHHHHHHHHTHHHHTTTCSEEEEEEECTTTTTTCC
T ss_pred EehhhCCCCHHHHHHHHHHHHHHHHcCCcceeEeEecCHHHHHhcc
Confidence 9999999999999999 9999999999999999776667797643
No 2
>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str}
Probab=99.85 E-value=5.7e-22 Score=180.44 Aligned_cols=85 Identities=26% Similarity=0.430 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcC
Q psy3043 588 EVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRS 665 (731)
Q Consensus 588 ~v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~ 665 (731)
.++++|+++|+++| +|.+| +|+|||+.|+||. |||+||+|+|||++|+||++|+|||+ ++|+|+|++
T Consensus 9 ~~~~~I~~~L~~~l-~p~~l-------~V~d~S~~H~~~~---G~gsHf~v~IVS~~F~G~s~v~RHrlVy~~L~~ei~~ 77 (107)
T 2dhm_A 9 MIRERIEEKLRAAF-QPVFL-------EVVDESYRHNVPA---GSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELST 77 (107)
T ss_dssp CHHHHHHHHHHHHT-CCSCC-------EEEECCCCCSSCC---CSCCCEEEEEECGGGSSCCSSHHHHHHHHHTHHHHHT
T ss_pred CHHHHHHHHHHhcC-CCcEE-------EEEECcccccCCC---CCCceEEEEEEchhhCCCCHHHHHHHHHHHHHHHHcC
Confidence 35689999999996 99998 9999999999874 78999999999999999999999999 999999999
Q ss_pred CCceeeeeccchhhhhhh
Q psy3043 666 PGKQEGVGSNPAKAWNFI 683 (731)
Q Consensus 666 ~i~~~~~~~~~~~~w~~~ 683 (731)
+||++++.+.|.+||++.
T Consensus 78 ~IHALsi~t~TP~Ew~~~ 95 (107)
T 2dhm_A 78 TVHALALHTYTIKEWEGL 95 (107)
T ss_dssp TCCCCEEEEECHHHHHTS
T ss_pred CcceEEEEecCHHHHHhc
Confidence 999999977777789763
No 3
>2kdn_A Putative uncharacterized protein PFE0790C; solution structure, ssgcid, seattle structural genomics center for infectious disease; NMR {Plasmodium falciparum}
Probab=99.75 E-value=1.6e-18 Score=157.86 Aligned_cols=77 Identities=30% Similarity=0.498 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCC
Q psy3043 589 VVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSP 666 (731)
Q Consensus 589 v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~ 666 (731)
.+++|+++|+++| +|.+| +|+|||+ |||+||+|+|||++|+||++|+|||+ ++|+|+|++
T Consensus 25 ~~~~I~~~L~~~l-~p~~l-------~V~DeS~---------G~gsHF~v~IVS~~F~Gks~v~RHRlVy~aL~~e~~~- 86 (108)
T 2kdn_A 25 IQKVIEDKLSSAL-KPTFL-------ELVDKSC---------GCGTSFDAVIVSNNFEDKKLLDRHRLVNTILKEELQN- 86 (108)
T ss_dssp HHHHHHHHHHHHH-CCSEE-------EEEECCC---------SSSCCEEEEEECGGGTTCCHHHHHHHHHHHHHHHGGG-
T ss_pred cHHHHHHHHHhhC-CCcEE-------EEEeCCC---------CCCceEEEEEEehhhCCCCHHHHHHHHHHHHHHHHhc-
Confidence 4579999999997 99998 9999996 57899999999999999999999999 999999997
Q ss_pred Cceeeeeccchhhhhhh
Q psy3043 667 GKQEGVGSNPAKAWNFI 683 (731)
Q Consensus 667 i~~~~~~~~~~~~w~~~ 683 (731)
||++++.+.|.+||++.
T Consensus 87 IHALsi~t~TP~Ew~~~ 103 (108)
T 2kdn_A 87 IHAFSMKCHTPLEYDKL 103 (108)
T ss_dssp CSCEEEEEECHHHHHHH
T ss_pred CceEEEEecChHHHHHh
Confidence 99999976666779763
No 4
>3o2e_A BOLA-like protein; ssgcid, iodide, SAD, seattle structural genom center for infectious disease, BOL like protein, unknown FU; 1.95A {Babesia bovis}
Probab=99.75 E-value=5.5e-19 Score=160.25 Aligned_cols=76 Identities=33% Similarity=0.512 Sum_probs=69.4
Q ss_pred HHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCC
Q psy3043 589 VVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSP 666 (731)
Q Consensus 589 v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~ 666 (731)
++++|+++|+++| +|.+| +|+|||+ |||+||+|+|||++|+||++|+|||+ ++|+|+|+ +
T Consensus 24 ~~~~I~~kL~~~l-~p~~l-------~V~D~S~---------g~gsHf~v~IVS~~F~Gks~v~RHRlVy~aL~~ei~-~ 85 (105)
T 3o2e_A 24 SKSIVEERLRSML-SPQFL-------KVTDNSG---------GCGAAFNAYIVSQQFEGKGLLDRQRLVNSAIAAEMP-Q 85 (105)
T ss_dssp CHHHHHHHHHHHH-CCSEE-------EEEECCB---------TTBEEEEEEEECGGGTTCCHHHHHHHHHHHTTTTGG-G
T ss_pred HHHHHHHHHHhhC-CCCEE-------EEEECCC---------CCCcEEEEEEEchHhCCCCHHHHHHHHHHHHHHHHh-c
Confidence 5679999999997 99998 9999996 57899999999999999999999999 99999998 7
Q ss_pred Cceeeeeccchhhhhh
Q psy3043 667 GKQEGVGSNPAKAWNF 682 (731)
Q Consensus 667 i~~~~~~~~~~~~w~~ 682 (731)
||++++.+.+.+||++
T Consensus 86 IHALsi~t~TP~Ew~~ 101 (105)
T 3o2e_A 86 IHAFTMKCLTPGEWEA 101 (105)
T ss_dssp EEEEEEEEECHHHHHH
T ss_pred CceeEEEeCCHHHHHH
Confidence 9999997777777986
No 5
>1v9j_A BOLA-like protein riken cDNA 1110025L05; stationary phase morphogene, stress-induced morphogene, structural genomics; NMR {Mus musculus} SCOP: d.52.6.1
Probab=99.73 E-value=1.5e-18 Score=159.33 Aligned_cols=76 Identities=32% Similarity=0.412 Sum_probs=68.5
Q ss_pred HHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCCC
Q psy3043 590 VSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSPG 667 (731)
Q Consensus 590 ~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~i 667 (731)
+++|+++|+++| +|.+| +|+|||++ |||+||+|+|||++|+||++|+|||+ ++|+|+|++ |
T Consensus 32 ~~~I~~~L~~~l-~p~~l-------~V~DeS~~--------G~gsHF~v~IVS~~F~Gks~V~RHRlVy~aL~eei~~-I 94 (113)
T 1v9j_A 32 ADYLREKLRQDL-EAEHV-------EVEDTTLN--------RCATSFRVLVVSAKFEGKPLLQRHRLVNECLAEELPH-I 94 (113)
T ss_dssp HHHHHHHHHHHH-TCSEE-------EEEECCSS--------SSCCCEEEEEECSHHHHSCHHHHHHHHHHHTTTTGGG-C
T ss_pred HHHHHHHHHhhC-CCcEE-------EEEeccCC--------CCCceEEEEEEchhhCCCCHHHHHHHHHHHHHHHHhc-C
Confidence 468999999996 99998 99999963 67899999999999999999999999 999999997 9
Q ss_pred ceeeeeccchhhhhh
Q psy3043 668 KQEGVGSNPAKAWNF 682 (731)
Q Consensus 668 ~~~~~~~~~~~~w~~ 682 (731)
|++++.+.|.+||++
T Consensus 95 HALsi~t~TP~Ew~~ 109 (113)
T 1v9j_A 95 HAFEQKTLTPEQWTR 109 (113)
T ss_dssp SSEEEEEECHHHHHH
T ss_pred ceEEEEecChHHHHH
Confidence 999997666677975
No 6
>3tr3_A BOLA; cellular processes, stress-induced, unknown function; 2.46A {Coxiella burnetii}
Probab=99.68 E-value=4.4e-17 Score=142.01 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=66.2
Q ss_pred HHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCC
Q psy3043 589 VVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSP 666 (731)
Q Consensus 589 v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~ 666 (731)
..++|+++|+++| +|.++ +|++ |||+||+|+|||++|+||++|+|||+ ++|+|+|+++
T Consensus 6 ~~~~I~~~L~~~l-~~~~l-------~V~~------------g~gshf~v~IVS~~F~G~~~v~Rhr~V~~~L~~~~~~~ 65 (82)
T 3tr3_A 6 TTHDIKQWIETGL-SESRV-------ISAE------------GDGHHFEAVVLCPTFEGQTALTRHRLVYNALGSHMQSD 65 (82)
T ss_dssp CHHHHHHHHHHHS-TTCEE-------EEEE------------ECSSEEEEEEECGGGTTCCHHHHHHHHHHHTGGGGTTT
T ss_pred hHHHHHHHHHhhC-CCcEE-------EEEc------------CCCCeEEEEEEchhhCCCCHHHHHHHHHHHHHHHHcCC
Confidence 3578999999996 99998 8872 57899999999999999999999999 9999999889
Q ss_pred Cceeeeeccchhhhhh
Q psy3043 667 GKQEGVGSNPAKAWNF 682 (731)
Q Consensus 667 i~~~~~~~~~~~~w~~ 682 (731)
+|++++.+.+.+||++
T Consensus 66 iHAL~i~t~Tp~Ew~~ 81 (82)
T 3tr3_A 66 IHALSLKTYTPDEYER 81 (82)
T ss_dssp CSEEEEEEECHHHHHC
T ss_pred cceEEEEeCCHHHHhc
Confidence 9999997777777974
No 7
>2kz0_A BOLA family protein; BOLA protein family, human monocytotropic ehrlichiosis, STRE response, structural genomics; NMR {Ehrlichia chaffeensis}
Probab=99.67 E-value=3.8e-17 Score=140.54 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=59.4
Q ss_pred HHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCCC
Q psy3043 590 VSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSPG 667 (731)
Q Consensus 590 ~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~i 667 (731)
.++|+++|+++| +|.++ +|+||| |||+||+|+|||++|+||++|+|||+ ++|+|+ +|
T Consensus 8 ~~~I~~~L~~~l-~~~~l-------~V~d~S----------G~g~Hf~v~IVS~~F~G~s~v~rHr~Vy~~L~~e---~i 66 (76)
T 2kz0_A 8 QSQLELLIRNAF-PEAEI-------TVTSLV----------GDNNHYSIKVISSQFQGKSKLEQHRMIYKVLDGL---NI 66 (76)
T ss_dssp THHHHHHHHHHC-TTEEE-------EEECCS----------STTSCCEEEEEEGGGTTCCHHHHHHHHHHHTTTS---CC
T ss_pred HHHHHHHHHhhC-CCcEE-------EEEECC----------CCccEEEEEEEchHhCCCCHHHHHHHHHHHhccC---Cc
Confidence 368999999996 99998 999999 35799999999999999999999999 999999 89
Q ss_pred ceeeeeccc
Q psy3043 668 KQEGVGSNP 676 (731)
Q Consensus 668 ~~~~~~~~~ 676 (731)
|++++.+.+
T Consensus 67 HALsi~t~t 75 (76)
T 2kz0_A 67 HAIQIQTGC 75 (76)
T ss_dssp CSSSEEECC
T ss_pred eEEEEEEeC
Confidence 999886543
No 8
>1xs3_A Hypothetical protein XC975; BOLA-like, structural genomics, AN integrated structural and functional genomic project, unknown function; NMR {Synthetic}
Probab=99.67 E-value=5.8e-17 Score=140.57 Aligned_cols=72 Identities=24% Similarity=0.240 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCC
Q psy3043 589 VVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSP 666 (731)
Q Consensus 589 v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~ 666 (731)
..++|+++|+++| +|.++ +|+ | |||+||+|+|||++|+|||+|+|||+ ++|+|+|+++
T Consensus 7 ~~~~I~~~L~~~l-~~~~l-------~V~----G--------~~gsHf~v~IVS~~F~G~~~v~RHrlVy~~L~~e~~~~ 66 (80)
T 1xs3_A 7 DAETIRKLIESGL-PEARV-------DVQ----G--------EDGVHFEATVVSPAFVGKAPLARHRMVYATLGELMGGA 66 (80)
T ss_dssp HHHHHHHHHHHHS-SSCEE-------EEE----S--------CTTSCCEEEEECGGGCSSCCHHHHHHHHHHTTSTTTTC
T ss_pred CHHHHHHHHHhhC-CCcEE-------EEE----c--------CCCCEEEEEEEchhhCCCcHHHHHHHHHHHHHHHHcCC
Confidence 3579999999996 99998 887 1 46899999999999999999999999 9999999988
Q ss_pred Cceeeeeccchhhh
Q psy3043 667 GKQEGVGSNPAKAW 680 (731)
Q Consensus 667 i~~~~~~~~~~~~w 680 (731)
+|++++.+.+.+||
T Consensus 67 iHALsi~t~Tp~E~ 80 (80)
T 1xs3_A 67 IHALQLKTLTPDEA 80 (80)
T ss_dssp CSCCEEEEECGGGC
T ss_pred cceEEEEecCCCCC
Confidence 99999966555555
No 9
>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1
Probab=99.65 E-value=1.2e-16 Score=143.12 Aligned_cols=72 Identities=15% Similarity=0.260 Sum_probs=64.9
Q ss_pred HHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhc-CCC
Q psy3043 591 STVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERR-SPG 667 (731)
Q Consensus 591 ~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~-~~i 667 (731)
++|+++|+++| +|.+| +|+ |||+||+|+|||++|+|||+|+|||+ ++|+|+|+ +++
T Consensus 9 ~~I~~~L~~~l-~p~~l-------~V~-------------G~gsHf~v~IVS~~F~Gks~v~RHRlVy~aL~~e~~~~~I 67 (97)
T 1ny8_A 9 NEIQSVLMNAL-SLQEV-------HVS-------------GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRI 67 (97)
T ss_dssp HHHHHHHHHHH-CCSEE-------EEE-------------ESSSEEEEEEESSTTSSSCHHHHHHHHHTTTHHHHHHHTT
T ss_pred HHHHHHHHhhC-CCcEE-------EEE-------------cCCceEEEEEEChhhCCCCHHHHHHHHHHHHHHHHccCCc
Confidence 58999999997 99998 887 46899999999999999999999999 99999999 689
Q ss_pred ceeeeeccchhhhhhh
Q psy3043 668 KQEGVGSNPAKAWNFI 683 (731)
Q Consensus 668 ~~~~~~~~~~~~w~~~ 683 (731)
|++++.+.|.+||++.
T Consensus 68 HALsi~t~TP~Ew~~~ 83 (97)
T 1ny8_A 68 HAVSIKAYTPAEWARD 83 (97)
T ss_dssp SEEEEEECCHHHHHHH
T ss_pred ceEEeEecChHHHHhh
Confidence 9999977777779864
No 10
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=27.60 E-value=4.2 Score=28.63 Aligned_cols=20 Identities=25% Similarity=0.579 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy3043 243 LTLGSSVLITFILVWLPFLS 262 (731)
Q Consensus 243 lkLg~vVl~tfal~flPFl~ 262 (731)
.+.-+++++.|+++|+|+..
T Consensus 5 ~k~l~~vv~~F~icW~P~~i 24 (33)
T 2ki9_A 5 AKTLGLVLAVLLICWFPVLA 24 (33)
T ss_dssp SSHHHHHHHHHTTTSSHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHH
Confidence 45567888999999999853
No 11
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=26.16 E-value=39 Score=36.36 Aligned_cols=24 Identities=29% Similarity=0.758 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3043 239 IRLLLTLGSSVLITFILVWLPFLS 262 (731)
Q Consensus 239 i~rllkLg~vVl~tfal~flPFl~ 262 (731)
-+|.++..++|+++|++||+||..
T Consensus 404 erk~~k~L~iVv~~F~iCWlPf~i 427 (510)
T 4grv_A 404 LRHGVLVARAVVIAFVVCWLPYHV 427 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999999999999963
Done!