Query psy3045
Match_columns 267
No_of_seqs 189 out of 1492
Neff 11.5
Searched_HMMs 29240
Date Sat Aug 17 00:18:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 1.1E-33 3.8E-38 219.1 25.3 221 11-266 3-237 (284)
2 2yd9_A Receptor-type tyrosine- 100.0 4.4E-33 1.5E-37 217.9 21.5 224 10-265 3-249 (304)
3 3b43_A Titin; I-SET IG fold, e 100.0 3E-32 1E-36 230.4 24.3 222 11-266 3-242 (570)
4 3b43_A Titin; I-SET IG fold, e 100.0 1.6E-31 5.5E-36 226.0 24.1 213 11-262 288-518 (570)
5 1qz1_A Neural cell adhesion mo 100.0 2E-31 6.7E-36 207.1 22.3 215 13-265 2-240 (291)
6 3kld_A Contactin 4, axcam, BIG 100.0 8.3E-32 2.9E-36 217.2 19.7 246 12-266 4-340 (384)
7 2wim_A N-CAM 2, NCAM2, neural 100.0 4.9E-31 1.7E-35 204.8 22.9 218 12-266 3-239 (291)
8 3qs7_E FL cytokine receptor; i 100.0 8.6E-31 3E-35 213.3 24.5 240 14-265 49-370 (423)
9 1cs6_A Axonin-1; neural cell a 100.0 4.8E-31 1.7E-35 212.6 20.7 246 12-266 3-339 (382)
10 3dmk_A DOWN syndrome cell adhe 100.0 9.5E-31 3.2E-35 229.9 23.9 225 12-266 245-474 (816)
11 3p3y_A Neurofascin; IG domains 100.0 8.7E-31 3E-35 212.5 21.3 249 11-265 14-356 (404)
12 1bih_A Hemolin; insect immunit 100.0 5.1E-31 1.8E-35 213.3 18.4 247 11-265 4-353 (395)
13 3laf_A Deleted in colorectal c 100.0 2.3E-30 7.8E-35 210.0 19.8 224 12-266 120-357 (403)
14 2v5m_A Dscam; neurobiology SPL 100.0 6.6E-30 2.3E-34 206.3 20.4 246 12-265 2-351 (388)
15 2o26_X MAST/stem cell growth f 100.0 2.3E-29 7.9E-34 195.4 21.7 207 11-261 10-229 (290)
16 2ec8_A MAST/stem cell growth f 100.0 3.3E-29 1.1E-33 210.0 24.2 237 11-265 34-358 (524)
17 3o4o_C Interleukin-1 receptor 100.0 1.9E-30 6.7E-35 205.8 15.9 223 10-263 15-272 (339)
18 4dep_C Interleukin-1 receptor 100.0 6.6E-30 2.3E-34 203.6 18.4 217 23-264 15-273 (349)
19 2y25_A Myomesin; structural pr 100.0 6.4E-31 2.2E-35 206.6 12.2 229 11-266 5-267 (317)
20 3ejj_X Macrophage colony-stimu 100.0 3.8E-29 1.3E-33 194.0 21.6 216 12-264 3-230 (289)
21 2ec8_A MAST/stem cell growth f 100.0 1.6E-29 5.4E-34 211.9 18.9 215 11-262 209-447 (524)
22 1itb_B Type 1 interleukin-1 re 100.0 1.6E-29 5.3E-34 198.6 16.2 216 23-266 13-254 (315)
23 3qs9_E FL cytokine receptor; i 100.0 3.4E-28 1.2E-32 203.0 23.0 233 23-266 56-371 (527)
24 3rjd_A High affinity immunoglo 100.0 9.7E-29 3.3E-33 189.0 17.9 204 13-263 1-217 (262)
25 1ry7_B FGFR-3, fibroblast grow 100.0 6.8E-30 2.3E-34 202.3 11.7 229 23-264 16-269 (334)
26 1e07_A Carcinoembryonic antige 100.0 3.8E-27 1.3E-31 202.0 27.8 233 24-265 298-603 (642)
27 4dkd_C Macrophage colony-stimu 100.0 1.2E-28 4.2E-33 191.4 15.6 215 11-263 2-229 (292)
28 3qs9_E FL cytokine receptor; i 100.0 4.8E-28 1.6E-32 202.1 19.1 199 23-262 235-448 (527)
29 3dmk_A DOWN syndrome cell adhe 100.0 6.1E-28 2.1E-32 212.2 19.8 239 12-262 428-755 (816)
30 3oq3_B IFN-alpha/beta binding 100.0 3.2E-27 1.1E-31 186.6 20.3 201 23-262 37-273 (329)
31 3laf_A Deleted in colorectal c 100.0 8.4E-27 2.9E-31 189.0 21.5 219 12-265 20-265 (403)
32 3mjg_X Beta-type platelet-deri 100.0 1.7E-27 5.9E-32 184.7 16.8 213 14-262 1-222 (289)
33 2rcj_C Light chain; immunoglob 100.0 6.3E-27 2.2E-31 196.0 21.0 216 23-263 8-263 (523)
34 2wng_A Tyrosine-protein phosph 100.0 5.7E-28 2E-32 190.7 13.9 217 15-264 5-265 (327)
35 2y23_A Myomesin; structural pr 100.0 7E-27 2.4E-31 183.1 19.9 217 23-265 9-266 (312)
36 2oz4_A Intercellular adhesion 100.0 5.2E-27 1.8E-31 179.9 18.2 203 10-261 3-225 (265)
37 3vh8_G Killer cell immunoglobu 100.0 3.5E-27 1.2E-31 185.3 17.5 214 11-263 22-259 (316)
38 4fqp_A Poliovirus receptor; im 100.0 8.5E-28 2.9E-32 188.6 13.5 212 23-264 8-261 (313)
39 4fom_A Poliovirus receptor-rel 100.0 2.1E-28 7.3E-33 191.6 9.7 214 23-264 7-256 (308)
40 3u83_A Poliovirus receptor-rel 100.0 2.4E-27 8.2E-32 187.3 15.8 220 13-264 14-276 (331)
41 2rcj_C Light chain; immunoglob 99.9 1.3E-26 4.3E-31 194.2 19.5 223 12-265 113-367 (523)
42 2nzi_A Titin; IG-domain, FNIII 99.9 3.6E-26 1.2E-30 178.6 19.5 221 10-261 1-251 (305)
43 1e07_A Carcinoembryonic antige 99.9 2.1E-25 7.1E-30 191.2 25.2 200 23-265 211-425 (642)
44 2ocw_A Polymeric-immunoglobuli 99.9 1.9E-25 6.6E-30 189.5 24.7 244 10-264 109-489 (585)
45 1wio_A CD4, T-cell surface gly 99.9 1.9E-26 6.4E-31 184.6 17.1 180 25-264 106-326 (363)
46 2a38_A Titin; Z1Z2, structural 99.9 1.3E-26 4.3E-31 169.3 14.6 172 11-215 3-193 (194)
47 1wio_A CD4, T-cell surface gly 99.9 6.1E-27 2.1E-31 187.4 13.7 198 23-264 2-224 (363)
48 2j8h_A Titin, connectin; cardi 99.9 2.4E-26 8.3E-31 168.3 15.6 176 10-216 1-196 (197)
49 2yd1_A Tyrosine-protein phosph 99.9 5.2E-26 1.8E-30 168.5 16.5 180 10-218 3-201 (212)
50 2ocw_A Polymeric-immunoglobuli 99.9 3.2E-24 1.1E-28 182.0 28.2 234 23-260 8-376 (585)
51 2jll_A NCAM2, neural cell adhe 99.9 1.7E-24 5.7E-29 174.8 24.1 212 13-260 1-239 (389)
52 1qgc_4 Protein (immunoglobulin 99.9 1.9E-26 6.7E-31 188.9 12.6 220 13-263 116-387 (438)
53 1z7z_I Intercellular adhesion 99.9 9.3E-26 3.2E-30 185.5 16.6 203 16-264 2-234 (450)
54 1z7z_I Intercellular adhesion 99.9 1.4E-25 5E-30 184.4 16.4 195 25-263 198-412 (450)
55 1qgc_4 Protein (immunoglobulin 99.9 6.6E-26 2.3E-30 185.8 13.4 207 23-258 9-257 (438)
56 3lcy_A Titin; A-BAND, IG tande 99.9 4.9E-25 1.7E-29 161.2 16.6 173 10-216 4-195 (197)
57 2c5d_C AXL oncogene, tyrosine- 99.9 3.1E-25 1.1E-29 162.2 15.3 171 12-215 1-191 (195)
58 2wv3_A Neuroplastin; igcam, me 99.9 1.8E-24 6.2E-29 157.4 19.2 165 12-216 2-189 (190)
59 1rhf_A Tyrosine-protein kinase 99.9 4.6E-25 1.6E-29 159.4 15.7 164 13-215 2-181 (182)
60 1f97_A Junction adhesion molec 99.9 1.3E-24 4.6E-29 160.7 18.4 172 14-216 2-206 (212)
61 1za6_B IGG heavy chain; immuno 99.9 4.2E-26 1.4E-30 181.3 10.7 216 23-264 8-287 (344)
62 2yd6_A PTPRD protein; hydrolas 99.9 1E-24 3.5E-29 161.6 17.0 178 10-216 3-203 (212)
63 2v5m_A Dscam; neurobiology SPL 99.9 8.9E-25 3E-29 176.3 18.0 163 23-215 220-387 (388)
64 2va4_A NCAM2, N-CAM 2, neural 99.9 7.8E-25 2.7E-29 159.5 15.9 168 12-215 1-191 (192)
65 1epf_A NCAM, protein (neural c 99.9 6.5E-25 2.2E-29 159.8 15.0 167 13-215 2-189 (191)
66 2iep_A Muscle-specific kinase 99.9 8.3E-25 2.8E-29 159.4 15.0 170 11-216 5-189 (192)
67 2v44_A NCAM2, neural cell adhe 99.9 3.2E-24 1.1E-28 155.9 17.8 165 16-216 5-186 (189)
68 2rik_A Titin; I-SET IG fold, p 99.9 4.7E-24 1.6E-28 164.9 19.2 174 11-216 96-283 (284)
69 3grw_A Fibroblast growth facto 99.9 4.8E-24 1.6E-28 160.9 17.7 184 8-217 6-218 (241)
70 4fa8_A Secreted protein BARF1; 99.9 7E-25 2.4E-29 160.8 12.6 157 24-209 2-194 (203)
71 2v5t_A NCAM2, N-CAM 2, neural 99.9 4.2E-24 1.4E-28 155.2 16.6 171 13-216 2-187 (189)
72 1hzh_H IGG, immunoglobulin hea 99.9 1E-24 3.6E-29 179.7 14.5 216 23-264 8-296 (457)
73 3k0w_A Mucosa-associated lymph 99.9 3.6E-24 1.2E-28 159.3 15.7 178 12-216 17-201 (218)
74 2wqr_A IG epsilon chain C regi 99.9 2.6E-25 9E-30 175.2 10.0 228 10-264 4-264 (323)
75 1iga_A IGA1; immunoglobulin; N 99.9 2.6E-23 8.7E-28 172.2 21.6 118 146-265 259-396 (475)
76 1igt_B IGG2A intact antibody - 99.9 9.4E-25 3.2E-29 179.3 12.4 225 26-263 134-390 (444)
77 2v9r_A Roundabout homolog 1; p 99.9 1.8E-24 6.2E-29 160.0 12.6 183 12-228 8-210 (212)
78 3kld_A Contactin 4, axcam, BIG 99.9 5.4E-24 1.9E-28 171.6 15.9 160 23-216 213-382 (384)
79 3ojm_B Fibroblast growth facto 99.9 1.9E-23 6.5E-28 156.5 17.8 180 12-217 14-221 (231)
80 1igt_B IGG2A intact antibody - 99.9 2.2E-24 7.6E-29 177.1 13.8 216 23-264 8-287 (444)
81 3v2a_R Vascular endothelial gr 99.9 2.8E-25 9.6E-30 194.1 8.6 218 14-259 224-462 (772)
82 3jz7_A MCAR, CAR, coxsackievir 99.9 1.2E-23 4.2E-28 155.7 16.1 165 23-216 8-211 (214)
83 1nbq_A JAM, junctional adhesio 99.9 2.4E-24 8.4E-29 158.9 11.9 168 13-211 4-201 (209)
84 3sgj_C Human FCG3A receptor; r 99.9 1.8E-24 6.2E-29 159.1 10.4 167 11-223 5-180 (204)
85 3rbs_A Myomesin-1; immunoglobu 99.9 7.7E-24 2.6E-28 156.0 13.4 170 13-215 3-205 (207)
86 2vr9_A Roundabout 1, ROBO; imm 99.9 8.3E-24 2.8E-28 157.1 12.6 172 11-215 7-204 (217)
87 1fnl_A Low affinity immunoglob 99.9 8.5E-24 2.9E-28 151.9 11.8 161 10-216 4-173 (175)
88 3p3y_A Neurofascin; IG domains 99.9 6.5E-23 2.2E-27 166.2 17.9 170 13-216 219-402 (404)
89 1bih_A Hemolin; insect immunit 99.9 2.1E-23 7.3E-28 168.6 15.0 161 23-215 220-394 (395)
90 1qz1_A Neural cell adhesion mo 99.9 5.2E-23 1.8E-27 159.5 16.3 173 11-216 98-289 (291)
91 1f2q_A High affinity immunoglo 99.9 1.1E-23 3.7E-28 151.5 11.4 159 12-216 3-170 (176)
92 1cs6_A Axonin-1; neural cell a 99.9 4.4E-23 1.5E-27 166.1 15.6 166 13-216 206-381 (382)
93 1igy_B IGG1 intact antibody MA 99.9 2.8E-25 9.6E-30 181.9 2.7 222 26-264 130-381 (434)
94 3mj6_A Junctional adhesion mol 99.9 2.3E-22 7.9E-27 154.1 18.4 188 14-239 6-257 (268)
95 1igy_B IGG1 intact antibody MA 99.9 1.3E-24 4.5E-29 177.9 6.1 215 23-263 7-276 (434)
96 3s97_C Contactin-1; carbonic a 99.9 1.3E-22 4.3E-27 148.8 15.3 169 23-216 16-200 (201)
97 4f80_A Butyrophilin subfamily 99.9 1.4E-22 4.7E-27 151.6 15.8 163 23-216 12-212 (226)
98 3qs7_E FL cytokine receptor; i 99.9 6.4E-23 2.2E-27 167.0 15.0 166 23-218 235-415 (423)
99 2fbo_J V1V2;, variable region- 99.9 1.3E-22 4.3E-27 153.9 15.1 160 23-207 10-239 (250)
100 3bp6_B Programmed cell death 1 99.9 2.3E-22 7.7E-27 147.7 15.9 160 23-217 10-193 (202)
101 2ny1_B T-cell surface glycopro 99.9 1.6E-22 5.5E-27 146.3 14.7 157 23-217 3-179 (184)
102 2d3v_A Leukocyte immunoglobuli 99.9 5.9E-23 2E-27 150.2 12.3 159 12-204 4-179 (196)
103 1hzh_H IGG, immunoglobulin hea 99.9 1.1E-23 3.6E-28 173.7 9.3 232 13-264 132-400 (457)
104 1uct_A Immunoglobulin alpha FC 99.9 3.2E-22 1.1E-26 148.6 16.3 159 11-204 7-180 (218)
105 1ugn_A LIR1, leukocyte immunog 99.9 6.9E-23 2.4E-27 150.1 12.6 160 12-205 4-181 (198)
106 2wim_A N-CAM 2, NCAM2, neural 99.9 4.6E-22 1.6E-26 154.2 17.2 173 12-217 97-284 (291)
107 1b6u_A KIR2DL3, P58 killer cel 99.9 1.9E-22 6.6E-27 153.1 14.5 210 12-259 6-240 (257)
108 3p2t_A Leukocyte immunoglobuli 99.9 7.9E-23 2.7E-27 149.5 11.7 160 12-205 4-179 (196)
109 1ry7_B FGFR-3, fibroblast grow 99.9 8.1E-22 2.8E-26 155.8 18.3 180 13-217 119-327 (334)
110 2r15_A Myomesin-1; sarcomeric 99.9 4.2E-22 1.4E-26 147.3 15.3 175 28-216 15-209 (212)
111 3v2a_R Vascular endothelial gr 99.9 1.7E-22 5.7E-27 176.6 15.3 210 23-264 134-373 (772)
112 3sbw_C Programmed cell death 1 99.9 8E-22 2.7E-26 146.9 16.3 164 23-216 9-210 (222)
113 2ifg_A High affinity nerve gro 99.9 4.6E-23 1.6E-27 163.9 10.0 168 10-216 155-344 (347)
114 1oll_A NK receptor; immune sys 99.9 2.6E-22 8.9E-27 145.7 13.1 159 12-204 3-172 (188)
115 3r4d_A CEA-related cell adhesi 99.9 4.5E-22 1.5E-26 146.7 14.1 158 23-209 7-191 (208)
116 3ry4_A Low affinity immunoglob 99.9 1.5E-22 5E-27 144.6 11.0 149 12-206 3-159 (170)
117 1p6f_A NKP46, natural cytotoxi 99.9 4.7E-22 1.6E-26 149.8 14.2 185 11-229 5-203 (242)
118 1vca_A VCAM-D1,2, human vascul 99.9 2.9E-22 1E-26 147.1 12.6 147 24-206 10-179 (202)
119 2gi7_A GPVI protein; IG-like d 99.9 1.9E-22 6.3E-27 146.0 11.3 152 11-205 6-168 (184)
120 3u83_A Poliovirus receptor-rel 99.9 4E-22 1.4E-26 157.4 14.1 177 12-216 129-319 (331)
121 3b5h_A Cervical EMMPRIN, HAB18 99.9 4.7E-21 1.6E-25 138.5 18.3 153 23-216 6-182 (184)
122 1hng_A CD2; T lymphocyte adhes 99.9 1.6E-22 5.5E-27 145.2 9.9 155 23-213 4-172 (176)
123 2yd9_A Receptor-type tyrosine- 99.9 7E-22 2.4E-26 154.2 14.1 169 14-216 109-290 (304)
124 4fqp_A Poliovirus receptor; im 99.9 2.3E-21 8E-26 151.9 16.9 181 11-223 115-308 (313)
125 4frw_A Poliovirus receptor-rel 99.9 5.6E-22 1.9E-26 146.9 11.9 167 23-217 7-211 (218)
126 3mj8_L Stimulatory hamster ant 99.9 1.1E-22 3.6E-27 150.7 7.9 160 24-208 9-204 (213)
127 1jbj_A CD3 epsilon and gamma e 99.9 1.7E-22 5.7E-27 146.5 8.2 163 26-207 10-179 (186)
128 2x1w_L Vascular endothelial gr 99.9 2.7E-21 9.1E-26 143.2 13.9 164 23-216 15-206 (213)
129 3oq3_B IFN-alpha/beta binding 99.9 5E-21 1.7E-25 151.1 16.1 161 24-215 137-328 (329)
130 1itb_B Type 1 interleukin-1 re 99.9 9.1E-21 3.1E-25 148.6 17.5 176 13-216 100-313 (315)
131 2a38_A Titin; Z1Z2, structural 99.9 2.3E-21 8E-26 141.3 13.1 126 141-266 12-148 (194)
132 3ejj_X Macrophage colony-stimu 99.9 5.2E-21 1.8E-25 148.1 15.4 169 16-216 92-280 (289)
133 1lk3_L 9D7 light chain; antige 99.9 3E-21 1E-25 142.6 12.4 160 23-208 8-203 (210)
134 3d9a_L Light chain of hyhel10 99.9 9.4E-22 3.2E-26 145.6 9.6 163 23-211 9-207 (213)
135 3pv7_A B7-H6, IG-like domain-c 99.9 1.8E-21 6.3E-26 147.5 11.2 165 23-217 11-224 (248)
136 3nl4_L Antigen binding fragmen 99.9 1.3E-21 4.5E-26 144.8 10.2 160 14-201 2-198 (213)
137 2zg1_A Sialic acid-binding IG- 99.9 3E-20 1E-24 137.6 16.9 164 23-215 8-211 (214)
138 1zvo_C Myeloma immunoglobulin 99.9 7.2E-20 2.5E-24 152.7 20.7 216 23-263 8-341 (512)
139 1zvo_C Myeloma immunoglobulin 99.9 8E-20 2.7E-24 152.4 20.6 230 29-264 149-446 (512)
140 2o26_X MAST/stem cell growth f 99.9 4.8E-21 1.6E-25 148.5 12.0 173 12-216 90-287 (290)
141 2if7_A SLAM family member 6; N 99.9 4.7E-21 1.6E-25 139.6 11.1 156 23-208 6-183 (193)
142 2y23_A Myomesin; structural pr 99.9 3.3E-21 1.1E-25 150.8 10.9 170 13-215 106-310 (312)
143 2ghw_B Anti-SARS SCFV antibody 99.9 5.4E-20 1.8E-24 139.3 17.2 168 23-204 10-228 (247)
144 1nqb_A Single-chain antibody f 99.8 2.8E-20 9.7E-25 141.5 15.4 153 23-204 8-219 (256)
145 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.6E-20 5.4E-25 137.8 13.3 156 12-203 7-183 (201)
146 2c5d_C AXL oncogene, tyrosine- 99.8 2.3E-20 8E-25 136.1 14.1 126 137-265 5-151 (195)
147 2yd6_A PTPRD protein; hydrolas 99.8 5.1E-20 1.7E-24 136.2 15.8 125 141-265 13-152 (212)
148 3r06_A Anti-mouse CD3epsilon a 99.8 3.9E-21 1.3E-25 142.3 9.8 167 14-208 2-204 (213)
149 2yd1_A Tyrosine-protein phosph 99.8 1.1E-19 3.8E-24 134.3 17.7 131 135-265 7-154 (212)
150 4fom_A Poliovirus receptor-rel 99.8 7E-21 2.4E-25 148.8 11.7 165 23-216 122-299 (308)
151 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 1.2E-19 4.1E-24 138.1 17.9 180 14-206 4-235 (256)
152 2dru_A Chimera of CD48 antigen 99.8 1.9E-20 6.6E-25 134.7 12.6 151 23-210 7-174 (180)
153 3k0w_A Mucosa-associated lymph 99.8 8.9E-20 3E-24 135.5 16.5 130 136-265 20-162 (218)
154 3tv3_L PGT128 light chain, IG 99.8 2.5E-21 8.5E-26 143.1 7.8 161 24-209 9-203 (211)
155 3juy_B 3B3 single chain varian 99.8 4.5E-20 1.6E-24 140.5 15.0 176 13-204 6-243 (256)
156 1ccz_A Protein (CD58); LFA-3, 99.8 2.2E-20 7.5E-25 133.3 12.4 152 23-212 3-166 (171)
157 3esu_F Antibody 14B7* light ch 99.8 1.4E-19 4.8E-24 137.2 17.5 177 14-202 5-231 (250)
158 2p1y_A Bispecific alpha/beta T 99.8 8.8E-20 3E-24 137.3 16.2 165 23-204 8-222 (238)
159 2pet_A Lutheran blood group gl 99.8 5.1E-21 1.7E-25 143.3 9.0 155 23-203 8-211 (231)
160 2y25_A Myomesin; structural pr 99.8 4.5E-20 1.5E-24 144.6 14.7 176 24-216 107-314 (317)
161 2xzc_L FAB A.17 light chain; i 99.8 4E-20 1.4E-24 137.1 13.7 161 23-209 8-207 (216)
162 3uzq_A Anti-dengue MAB 4E11; d 99.8 6.4E-20 2.2E-24 139.4 15.1 168 23-204 9-230 (253)
163 2j8h_A Titin, connectin; cardi 99.8 5.7E-20 1.9E-24 134.2 14.2 129 138-266 8-149 (197)
164 3sob_L Antibody light chain; b 99.8 1E-20 3.5E-25 142.3 10.2 170 14-211 25-230 (237)
165 2j6e_L IGM, FAB light chain; a 99.8 1.1E-20 3.6E-25 142.0 9.9 168 14-209 21-227 (234)
166 2c1o_A IGK-C protein; FAB frag 99.8 8E-21 2.7E-25 144.5 9.3 167 13-207 38-245 (254)
167 4dep_C Interleukin-1 receptor 99.8 1.7E-20 5.9E-25 149.1 11.5 165 23-216 128-332 (349)
168 1rhf_A Tyrosine-protein kinase 99.8 1.3E-19 4.3E-24 130.7 14.8 124 139-265 7-143 (182)
169 3s96_B 3B5H10 FAB light chain; 99.8 9.7E-21 3.3E-25 140.6 9.2 160 24-208 9-211 (218)
170 1f3r_B FV antibody fragment; I 99.8 6.6E-20 2.3E-24 139.6 14.0 168 23-204 8-232 (257)
171 3gkz_A Anti-methamphetamine si 99.8 1.8E-19 6.2E-24 137.2 16.3 167 23-204 16-235 (257)
172 1hnf_A CD2; T lymphocyte adhes 99.8 1.6E-19 5.6E-24 129.8 15.1 156 23-214 7-178 (182)
173 4fmk_A Poliovirus receptor-rel 99.8 2E-20 7E-25 139.1 10.7 168 23-219 9-219 (225)
174 2c1o_A IGK-C protein; FAB frag 99.8 1.5E-20 5.1E-25 142.9 10.1 159 75-265 11-200 (254)
175 1q0x_L FAB 9B1, light chain; a 99.8 1.7E-20 5.7E-25 138.8 10.0 159 23-206 8-204 (212)
176 3mjg_X Beta-type platelet-deri 99.8 1.4E-19 4.9E-24 140.0 15.6 155 25-217 105-278 (289)
177 1mq8_A ICAM-1, intercellular a 99.8 2E-20 6.9E-25 143.6 10.4 205 23-264 7-234 (291)
178 1sy6_A T-cell surface glycopro 99.8 2E-20 6.7E-25 137.5 9.8 167 27-215 15-202 (204)
179 3umt_A SCFV heavy chain and li 99.8 1E-19 3.4E-24 138.5 13.9 169 23-204 10-231 (256)
180 4i0k_A CD276 antigen; immunogl 99.8 1.1E-20 3.9E-25 140.6 8.3 166 23-216 3-205 (222)
181 1qok_A MFE-23 recombinant anti 99.8 2.5E-19 8.6E-24 138.3 16.0 167 23-204 34-254 (282)
182 1epf_A NCAM, protein (neural c 99.8 1.2E-19 3.9E-24 131.9 13.1 122 139-263 7-142 (191)
183 1nfd_E H57 FAB; complex (immun 99.8 7.7E-21 2.6E-25 140.6 6.9 160 23-207 7-202 (212)
184 4dkd_C Macrophage colony-stimu 99.8 5.5E-20 1.9E-24 142.5 11.9 165 23-217 97-281 (292)
185 4fa8_A Secreted protein BARF1; 99.8 1.2E-20 4.2E-25 138.2 7.7 115 145-262 4-147 (203)
186 3lcy_A Titin; A-BAND, IG tande 99.8 1.3E-19 4.3E-24 132.3 13.0 124 140-266 13-148 (197)
187 3omz_A Human vdelta1 gamma del 99.8 6.8E-20 2.3E-24 139.7 11.9 177 13-203 2-231 (259)
188 3auv_A SC-DSFV derived from th 99.8 3E-19 1E-23 137.5 15.5 174 13-203 12-235 (276)
189 3ux9_B SCFV antibody; five hel 99.8 3.3E-19 1.1E-23 135.7 15.5 173 23-204 10-236 (256)
190 2iep_A Muscle-specific kinase 99.8 1.5E-19 5.2E-24 131.4 13.0 124 140-266 13-145 (192)
191 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 3.6E-20 1.2E-24 138.0 9.2 163 23-211 8-217 (222)
192 1moe_A Anti-CEA MAB T84.66; an 99.8 7.7E-19 2.6E-23 132.3 16.6 158 23-203 9-220 (240)
193 1c1e_H Catalytic antibody 1E9 99.8 4.5E-20 1.6E-24 137.1 9.6 160 23-208 8-211 (219)
194 2znx_A SCFV; fluorotryptohpan, 99.8 2.3E-19 7.7E-24 135.5 13.4 170 16-203 4-222 (242)
195 2wv3_A Neuroplastin; igcam, me 99.8 6.5E-19 2.2E-23 127.9 15.2 116 144-263 12-136 (190)
196 1dr9_A B7-1 (CD80), T lymphocy 99.8 5.3E-19 1.8E-23 129.6 14.7 160 23-212 2-196 (201)
197 3rjd_A High affinity immunoglo 99.8 1.9E-19 6.4E-24 137.3 12.5 148 23-207 90-249 (262)
198 3pl6_D MBP peptide / T-cell re 99.8 1.4E-19 4.8E-24 138.7 10.9 171 13-207 26-242 (268)
199 1dee_B IGM RF 2A2; FAB-IBP com 99.8 4.2E-19 1.4E-23 132.3 13.2 163 23-210 8-220 (223)
200 1mju_H Immunoglobulin MS6-12; 99.8 9.5E-20 3.3E-24 136.2 9.7 165 23-213 8-213 (227)
201 3bqu_C 3H6 FAB light chain; be 99.8 4.1E-21 1.4E-25 144.1 1.9 166 13-206 23-224 (233)
202 2v44_A NCAM2, neural cell adhe 99.8 1.4E-18 4.9E-23 125.9 15.0 119 141-263 9-138 (189)
203 4dzb_B Vbeta2 (MAIT T cell rec 99.8 2.3E-19 7.9E-24 135.7 10.8 169 16-208 4-222 (246)
204 3rbs_A Myomesin-1; immunoglobu 99.8 1.9E-18 6.5E-23 127.1 15.0 121 143-266 11-162 (207)
205 2fbj_H IGA-kappa J539 FAB (hea 99.8 8.4E-19 2.9E-23 130.4 13.2 160 23-208 8-212 (220)
206 3bkj_L WO2 IGG2A FAB fragment 99.8 1.8E-19 6.1E-24 136.8 9.7 166 14-207 35-241 (252)
207 3d9a_H Heavy chain of hyhel10 99.8 9.7E-20 3.3E-24 134.5 8.0 160 23-209 8-206 (210)
208 2v5t_A NCAM2, N-CAM 2, neural 99.8 9.1E-19 3.1E-23 126.9 13.0 125 141-266 9-143 (189)
209 2r15_A Myomesin-1; sarcomeric 99.8 1.7E-18 5.9E-23 127.8 14.6 118 149-266 17-162 (212)
210 2oz4_A Intercellular adhesion 99.8 6.2E-19 2.1E-23 134.8 12.6 151 23-216 106-263 (265)
211 2d3v_A Leukocyte immunoglobuli 99.8 7.8E-19 2.7E-23 128.2 12.5 116 145-263 15-140 (196)
212 1pz5_B Heavy chain of FAB (SYA 99.8 2.3E-19 8E-24 133.4 9.5 162 23-210 8-214 (220)
213 3eow_R Poliovirus receptor; im 99.8 1.6E-19 5.5E-24 134.3 7.7 163 23-215 7-210 (221)
214 1svz_A Immunoglobulin;, single 99.8 2.3E-18 7.8E-23 130.3 14.1 165 23-203 9-228 (247)
215 3p2t_A Leukocyte immunoglobuli 99.8 1.4E-18 4.6E-23 126.9 12.4 116 145-263 15-140 (196)
216 2nzi_A Titin; IG-domain, FNIII 99.8 1.8E-18 6.2E-23 134.8 13.8 127 137-266 7-149 (305)
217 2va4_A NCAM2, N-CAM 2, neural 99.8 1.8E-18 6.1E-23 125.6 12.9 118 143-264 13-139 (192)
218 3vh8_G Killer cell immunoglobu 99.8 7.1E-19 2.4E-23 138.0 11.2 157 13-205 119-296 (316)
219 2gjj_A A21 single-chain antibo 99.8 7.4E-18 2.5E-22 128.7 16.4 178 13-203 5-239 (264)
220 1dn0_B IGM-kappa cold agglutin 99.8 2.2E-18 7.4E-23 129.2 13.0 167 23-214 8-224 (232)
221 1gsm_A Madcam-1, mucosal addre 99.8 1.7E-17 5.8E-22 120.8 17.3 161 16-214 8-202 (210)
222 3fku_X Neutralizing antibody F 99.8 2.9E-18 9.9E-23 132.1 13.9 166 23-204 8-234 (280)
223 1hxm_B Gamma-delta T-cell rece 99.8 2.4E-18 8.2E-23 129.8 13.2 177 14-215 2-227 (242)
224 2jll_A NCAM2, neural cell adhe 99.8 2.2E-18 7.5E-23 138.9 13.7 121 142-265 8-144 (389)
225 1f97_A Junction adhesion molec 99.8 2.1E-18 7E-23 127.3 12.3 123 139-264 6-149 (212)
226 2gi7_A GPVI protein; IG-like d 99.8 3.3E-18 1.1E-22 123.6 13.1 115 145-263 18-134 (184)
227 3m8o_H Immunoglobulin A1 heavy 99.8 5.5E-18 1.9E-22 126.0 14.5 158 23-206 8-212 (221)
228 1ugn_A LIR1, leukocyte immunog 99.8 2.6E-18 8.8E-23 125.6 12.4 116 145-263 15-141 (198)
229 2gki_A Nuclease; anti-DNA anti 99.8 7.7E-18 2.6E-22 130.5 15.6 168 23-204 30-258 (291)
230 1uct_A Immunoglobulin alpha FC 99.8 3.1E-18 1.1E-22 127.0 12.7 117 145-263 19-147 (218)
231 1op3_H FAB 2G12, heavy chain; 99.8 7E-19 2.4E-23 131.3 9.2 158 23-206 8-214 (225)
232 2pet_A Lutheran blood group gl 99.8 6E-18 2.1E-22 126.5 14.3 126 141-266 7-165 (231)
233 2wbj_D OB TCR; transmembrane, 99.8 8.5E-18 2.9E-22 129.5 15.2 172 13-208 24-247 (279)
234 3bae_H WO2 IGG2A FAB fragment 99.8 1.2E-18 3.9E-23 130.4 10.0 161 23-209 8-218 (228)
235 2vr9_A Roundabout 1, ROBO; imm 99.8 2.5E-18 8.4E-23 127.5 11.6 126 136-263 11-151 (217)
236 3sgj_C Human FCG3A receptor; r 99.8 5.2E-18 1.8E-22 124.6 13.1 116 141-263 14-131 (204)
237 3o4o_C Interleukin-1 receptor 99.8 5E-19 1.7E-23 140.1 8.2 163 23-214 128-332 (339)
238 2v9r_A Roundabout homolog 1; p 99.8 1.5E-18 5.3E-23 128.0 10.3 124 140-265 15-156 (212)
239 3liz_H 4C3 monoclonal antibody 99.8 9.6E-19 3.3E-23 132.9 8.9 167 23-215 8-218 (253)
240 3ojm_B Fibroblast growth facto 99.8 7.7E-18 2.6E-22 125.8 13.7 123 142-264 27-165 (231)
241 1vca_A VCAM-D1,2, human vascul 99.8 5.3E-18 1.8E-22 124.3 12.3 116 145-263 12-136 (202)
242 3nl4_L Antigen binding fragmen 99.8 4.7E-18 1.6E-22 125.6 11.9 124 141-264 8-158 (213)
243 3q5y_A TCR N15 beta; IG, T cel 99.8 2E-18 6.8E-23 130.1 10.0 169 15-207 4-214 (240)
244 3grw_A Fibroblast growth facto 99.8 1.1E-17 3.8E-22 125.9 14.0 125 141-265 22-162 (241)
245 1fnl_A Low affinity immunoglob 99.8 8.6E-18 3E-22 120.4 12.4 118 139-263 12-131 (175)
246 3nl4_H Antigen binding fragmen 99.8 1.5E-18 5E-23 128.6 8.4 164 23-212 7-209 (215)
247 3qib_D 2B4 beta chain; IG doma 99.8 6.4E-18 2.2E-22 129.6 12.0 171 14-208 28-246 (270)
248 1f2q_A High affinity immunoglo 99.8 7.7E-18 2.6E-22 120.7 11.6 117 140-263 10-128 (176)
249 1jbj_A CD3 epsilon and gamma e 99.8 5.2E-18 1.8E-22 122.7 10.6 116 145-265 10-148 (186)
250 2vol_A Murine IGG FC; FC, zinc 99.8 2.8E-19 9.7E-24 131.7 3.7 155 27-206 15-197 (207)
251 4ei6_B Vbeta16 XV19 type II na 99.8 6.1E-18 2.1E-22 127.8 11.0 169 14-206 3-219 (245)
252 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 7.1E-18 2.4E-22 129.2 11.3 180 13-203 15-254 (268)
253 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.4E-17 5E-22 121.9 12.3 117 144-263 17-148 (201)
254 1nbq_A JAM, junctional adhesio 99.7 5.4E-18 1.8E-22 124.7 9.8 123 140-265 10-152 (209)
255 3mtr_A N-CAM-1, NCAM-1, neural 99.7 3.8E-17 1.3E-21 121.0 14.4 167 12-216 18-208 (215)
256 3nfj_J T cell receptor beta ch 99.7 2.7E-17 9.1E-22 124.3 13.8 164 23-208 9-221 (245)
257 2wng_A Tyrosine-protein phosph 99.7 2.5E-17 8.7E-22 129.7 14.2 125 139-265 8-163 (327)
258 2xqy_G A13-D6.3 monoclonal ant 99.7 7E-18 2.4E-22 128.5 10.5 158 23-206 14-214 (261)
259 3mj8_L Stimulatory hamster ant 99.7 1.4E-17 4.9E-22 123.0 12.0 122 143-264 9-159 (213)
260 1oll_A NK receptor; immune sys 99.7 1.6E-17 5.4E-22 120.4 11.5 115 145-262 14-138 (188)
261 3to4_D NKT vbeta2 (mouse varia 99.7 2.9E-17 1E-21 124.7 13.2 161 23-205 9-218 (253)
262 3s97_C Contactin-1; carbonic a 99.7 1.3E-17 4.4E-22 121.9 10.8 124 141-264 15-156 (201)
263 3d9a_L Light chain of hyhel10 99.7 1.9E-17 6.4E-22 122.4 11.8 125 141-265 8-158 (213)
264 2fbo_J V1V2;, variable region- 99.7 2.6E-17 9E-22 124.5 12.8 124 141-264 9-179 (250)
265 1hng_A CD2; T lymphocyte adhes 99.7 2.1E-17 7.1E-22 118.4 11.6 113 145-265 7-139 (176)
266 3bp6_B Programmed cell death 1 99.7 3.9E-17 1.3E-21 119.7 13.1 117 142-262 10-144 (202)
267 3bn9_D E2 FAB heavy chain; ant 99.7 1.5E-17 5E-22 126.3 11.0 158 23-206 8-219 (257)
268 2rgs_A I, IG gamma-2B heavy ch 99.7 3.8E-19 1.3E-23 132.0 2.0 169 11-206 7-205 (218)
269 3r4d_A CEA-related cell adhesi 99.7 6.8E-17 2.3E-21 118.8 13.8 119 145-266 10-154 (208)
270 1lk3_L 9D7 light chain; antige 99.7 3.2E-17 1.1E-21 120.9 12.1 125 141-265 7-157 (210)
271 1c5d_H Monoclonal antibody aga 99.7 2.2E-17 7.6E-22 122.2 11.0 160 23-208 8-207 (215)
272 1oga_E TRBC1, T-cell receptor 99.7 7.9E-17 2.7E-21 122.2 13.4 170 15-208 5-220 (252)
273 3r06_A Anti-mouse CD3epsilon a 99.7 5.6E-17 1.9E-21 119.8 11.4 124 141-264 8-157 (213)
274 2wqr_A IG epsilon chain C regi 99.7 4.2E-18 1.4E-22 134.0 5.1 157 23-206 121-309 (323)
275 1ypz_F T-cell receptor gamma c 99.7 7.4E-17 2.5E-21 120.7 11.6 162 23-208 9-218 (230)
276 3ry4_A Low affinity immunoglob 99.7 1.1E-16 3.8E-21 113.9 11.8 117 140-263 10-128 (170)
277 1bec_A 14.3.D T cell antigen r 99.7 4.3E-17 1.5E-21 122.6 10.0 162 23-206 7-212 (238)
278 1gsm_A Madcam-1, mucosal addre 99.7 2.4E-16 8.1E-21 114.8 13.2 114 144-264 17-142 (210)
279 1dr9_A B7-1 (CD80), T lymphocy 99.7 7.8E-17 2.7E-21 117.9 10.6 116 145-264 5-150 (201)
280 2w59_A IGY FCU3-4; immunoglobu 99.7 4.5E-18 1.5E-22 127.4 3.9 169 10-206 9-217 (231)
281 3b5h_A Cervical EMMPRIN, HAB18 99.7 2.3E-16 7.8E-21 113.8 12.7 105 145-257 9-120 (184)
282 1b6u_A KIR2DL3, P58 killer cel 99.7 2.2E-16 7.6E-21 119.7 13.0 117 144-263 16-147 (257)
283 3s96_B 3B5H10 FAB light chain; 99.7 1E-16 3.4E-21 118.8 10.8 122 143-264 9-166 (218)
284 2if7_A SLAM family member 6; N 99.7 2.6E-16 8.9E-21 114.5 12.5 122 141-264 5-153 (193)
285 3qib_D 2B4 beta chain; IG doma 99.7 1.2E-16 4.3E-21 122.4 11.2 154 75-264 3-194 (270)
286 3tv3_L PGT128 light chain, IG 99.7 1.1E-16 3.8E-21 118.1 10.5 120 143-264 9-156 (211)
287 3o3u_N Maltose-binding peripla 99.7 3.8E-16 1.3E-20 132.4 15.1 156 23-206 374-566 (581)
288 3qhz_H Human monoclonal antibo 99.7 3.9E-17 1.3E-21 122.3 7.5 166 23-214 8-226 (232)
289 1q0x_L FAB 9B1, light chain; a 99.7 1.3E-16 4.3E-21 117.8 10.0 124 141-264 7-160 (212)
290 3sob_L Antibody light chain; b 99.7 1.7E-16 5.7E-21 119.1 10.5 124 141-264 31-180 (237)
291 2xzc_L FAB A.17 light chain; i 99.7 3.6E-16 1.2E-20 115.7 12.0 125 141-265 7-160 (216)
292 1ypz_E T cell receptor delta, 99.7 2.8E-16 9.6E-21 115.5 11.0 151 23-205 9-197 (207)
293 3pv7_A B7-H6, IG-like domain-c 99.7 3.1E-16 1.1E-20 118.6 11.6 118 141-262 10-161 (248)
294 1i1c_A IGG2A, IG gamma-2A chai 99.7 7E-18 2.4E-22 126.8 2.4 156 27-207 29-212 (239)
295 1p6f_A NKP46, natural cytotoxi 99.7 3.7E-16 1.3E-20 117.6 11.8 116 145-263 17-142 (242)
296 2ifg_A High affinity nerve gro 99.7 4.6E-17 1.6E-21 129.3 6.7 117 142-265 166-290 (347)
297 3sbw_C Programmed cell death 1 99.7 1.7E-15 5.7E-20 112.5 14.6 119 141-263 8-159 (222)
298 3jz7_A MCAR, CAR, coxsackievir 99.7 3.4E-16 1.2E-20 115.4 10.2 115 142-259 8-160 (214)
299 2x1w_L Vascular endothelial gr 99.7 4.3E-16 1.5E-20 115.1 10.7 119 142-262 15-148 (213)
300 1c1e_H Catalytic antibody 1E9 99.7 2E-16 6.7E-21 117.4 8.9 120 143-262 9-167 (219)
301 3u2s_H PG9 heavy chain; greek 99.7 1.3E-16 4.4E-21 120.6 7.9 164 23-212 7-233 (248)
302 1l6x_A Immunoglobulin gamma-1 99.7 1.2E-17 4E-22 123.0 2.1 154 28-206 16-197 (207)
303 4f80_A Butyrophilin subfamily 99.7 6.5E-16 2.2E-20 115.2 11.5 113 144-261 14-159 (226)
304 3n9g_H FAB fragment of MAB CR4 99.7 8.1E-16 2.8E-20 115.0 12.0 165 23-215 8-223 (230)
305 1nfd_E H57 FAB; complex (immun 99.7 1.7E-16 5.8E-21 117.1 8.2 125 141-265 6-159 (212)
306 3bkj_L WO2 IGG2A FAB fragment 99.7 4.8E-16 1.6E-20 117.9 10.6 125 141-265 41-196 (252)
307 3knb_A Titin; IG-like, titin, 99.7 2.7E-16 9.4E-21 101.5 7.6 87 12-104 4-99 (100)
308 4frw_A Poliovirus receptor-rel 99.7 2.4E-15 8.2E-20 111.0 13.8 121 141-263 6-160 (218)
309 2ny1_B T-cell surface glycopro 99.7 5.1E-16 1.7E-20 112.0 9.6 108 144-262 5-138 (184)
310 3shs_A HOC head outer capsid p 99.7 1.2E-14 3.9E-19 107.3 16.5 194 23-257 10-230 (304)
311 2rgs_A I, IG gamma-2B heavy ch 99.7 5.9E-17 2E-21 120.2 4.6 119 146-264 23-162 (218)
312 2vol_A Murine IGG FC; FC, zinc 99.7 5.7E-17 2E-21 119.3 4.5 119 146-264 15-154 (207)
313 3tv3_H PGT128 heavy chain, IG 99.7 2E-16 6.8E-21 119.0 7.4 165 23-213 8-233 (239)
314 4dzb_B Vbeta2 (MAIT T cell rec 99.6 5.6E-16 1.9E-20 117.0 9.8 124 141-264 8-170 (246)
315 2ghw_B Anti-SARS SCFV antibody 99.6 1.3E-15 4.4E-20 115.1 11.8 118 144-261 12-177 (247)
316 1ccz_A Protein (CD58); LFA-3, 99.6 6.1E-16 2.1E-20 110.2 9.3 108 145-263 6-132 (171)
317 3knb_B Obscurin-like protein 1 99.6 6.8E-16 2.3E-20 100.8 8.4 79 138-216 17-104 (107)
318 1hnf_A CD2; T lymphocyte adhes 99.6 2.3E-15 7.8E-20 108.1 11.4 111 144-262 9-141 (182)
319 1moe_A Anti-CEA MAB T84.66; an 99.6 3E-15 1E-19 112.6 12.3 118 141-258 8-158 (240)
320 3knb_A Titin; IG-like, titin, 99.6 9.1E-16 3.1E-20 99.0 8.0 78 139-216 10-98 (100)
321 3knb_B Obscurin-like protein 1 99.6 8.9E-16 3E-20 100.3 7.7 87 11-105 11-106 (107)
322 3sob_H Antibody heavy chain, l 99.6 2.9E-15 1E-19 113.8 11.6 163 23-213 31-247 (256)
323 3bqu_C 3H6 FAB light chain; be 99.6 1.3E-16 4.4E-21 119.5 4.0 125 141-265 30-180 (233)
324 2p1y_A Bispecific alpha/beta T 99.6 5.4E-15 1.8E-19 111.0 12.8 116 141-259 7-165 (238)
325 2zg1_A Sialic acid-binding IG- 99.6 4.9E-15 1.7E-19 109.3 12.4 119 141-262 7-168 (214)
326 1iga_A IGA1; immunoglobulin; N 99.6 4E-15 1.4E-19 123.1 13.1 155 26-206 258-443 (475)
327 2aty_A Complement receptor chi 99.6 1.6E-15 5.3E-20 121.7 10.2 154 27-205 180-361 (376)
328 3iu4_H CHP3 FAB heavy chain; a 99.6 6.1E-16 2.1E-20 117.9 7.3 158 23-208 8-215 (263)
329 3pl6_D MBP peptide / T-cell re 99.6 2.7E-15 9.3E-20 114.8 10.6 126 138-264 30-191 (268)
330 1sy6_A T-cell surface glycopro 99.6 2E-15 6.9E-20 110.7 9.3 109 146-264 15-154 (204)
331 1nqb_A Single-chain antibody f 99.6 6.9E-15 2.4E-19 111.7 12.4 117 142-261 8-168 (256)
332 3mlr_H Human monoclonal anti-H 99.6 3.3E-15 1.1E-19 111.4 10.2 158 23-208 8-217 (226)
333 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 2.6E-15 8.9E-20 111.6 9.6 118 145-262 11-170 (222)
334 3nfj_J T cell receptor beta ch 99.6 4.1E-15 1.4E-19 112.2 10.7 124 141-264 8-169 (245)
335 2j6e_L IGM, FAB light chain; a 99.6 9.8E-16 3.4E-20 114.8 6.9 124 141-264 26-180 (234)
336 3o3u_N Maltose-binding peripla 99.6 1.4E-14 4.9E-19 122.7 14.6 123 141-265 373-517 (581)
337 1f3r_B FV antibody fragment; I 99.6 2.6E-15 8.7E-20 114.2 9.0 117 145-261 11-181 (257)
338 3d9a_H Heavy chain of hyhel10 99.6 1.2E-15 4.1E-20 112.4 6.9 118 144-262 10-161 (210)
339 1i1c_A IGG2A, IG gamma-2A chai 99.6 4.1E-16 1.4E-20 117.2 4.5 119 146-264 29-168 (239)
340 3mj6_A Junctional adhesion mol 99.6 9.5E-15 3.3E-19 111.6 12.1 112 141-258 12-158 (268)
341 3f8u_B Tapasin; endoplasmic re 99.6 9E-15 3.1E-19 115.7 11.7 162 15-204 158-388 (401)
342 2dru_A Chimera of CD48 antigen 99.6 1.6E-14 5.3E-19 103.7 12.0 111 143-263 8-142 (180)
343 4acp_A IG gamma-1 chain C regi 99.6 4.3E-16 1.5E-20 116.9 4.0 118 146-263 36-174 (240)
344 2w59_A IGY FCU3-4; immunoglobu 99.6 8.8E-16 3E-20 114.9 5.6 121 144-264 23-163 (231)
345 4ei6_B Vbeta16 XV19 type II na 99.6 1E-14 3.6E-19 110.0 11.5 123 141-264 9-169 (245)
346 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 3E-14 1E-18 108.2 13.7 118 140-258 9-173 (256)
347 1za6_B IGG heavy chain; immuno 99.6 3.6E-15 1.2E-19 118.3 8.9 120 143-262 9-163 (344)
348 1qok_A MFE-23 recombinant anti 99.6 2.5E-14 8.5E-19 110.3 13.2 120 142-262 34-204 (282)
349 2eo9_A Roundabout homolog 1; b 99.6 1E-14 3.5E-19 97.2 9.6 101 136-237 10-117 (118)
350 1mju_H Immunoglobulin MS6-12; 99.6 9.8E-15 3.4E-19 108.9 10.5 121 142-262 8-164 (227)
351 3esu_F Antibody 14B7* light ch 99.6 2.2E-14 7.4E-19 108.5 12.5 119 140-258 10-170 (250)
352 3auv_A SC-DSFV derived from th 99.6 1.6E-14 5.4E-19 111.0 11.8 119 140-258 18-173 (276)
353 3q5y_A TCR N15 beta; IG, T cel 99.6 1.2E-14 4.1E-19 109.3 10.9 123 141-264 9-167 (240)
354 2cqv_A MLCK, myosin light chai 99.6 3E-14 1E-18 94.3 11.7 83 137-219 10-101 (114)
355 3omz_A Human vdelta1 gamma del 99.6 2.3E-14 7.8E-19 109.0 12.5 119 141-259 9-175 (259)
356 4i0k_A CD276 antigen; immunogl 99.6 2.7E-15 9.3E-20 111.4 7.2 117 145-263 6-154 (222)
357 3gkz_A Anti-methamphetamine si 99.6 1.5E-14 5.2E-19 109.9 11.5 115 144-258 18-179 (257)
358 1hxm_A Gamma-delta T-cell rece 99.6 6.2E-14 2.1E-18 104.5 14.3 150 23-204 9-197 (229)
359 1iam_A ICAM-1, CD54, intercell 99.6 4E-14 1.4E-18 100.8 12.4 146 23-205 7-166 (185)
360 3juy_B 3B3 single chain varian 99.6 2.9E-14 9.8E-19 108.3 12.4 119 139-257 11-186 (256)
361 2wbj_D OB TCR; transmembrane, 99.6 1E-14 3.5E-19 112.2 10.0 126 139-264 29-195 (279)
362 3bae_H WO2 IGG2A FAB fragment 99.6 8.2E-15 2.8E-19 109.4 9.0 119 144-262 10-173 (228)
363 3umt_A SCFV heavy chain and li 99.6 2.8E-14 9.5E-19 108.4 11.9 115 144-258 12-175 (256)
364 1svz_A Immunoglobulin;, single 99.6 4E-14 1.4E-18 106.9 12.6 118 141-258 8-166 (247)
365 1op3_H FAB 2G12, heavy chain; 99.6 1E-14 3.6E-19 108.6 9.3 119 144-262 10-171 (225)
366 2znx_A SCFV; fluorotryptohpan, 99.6 3.5E-14 1.2E-18 106.9 12.2 118 141-258 8-161 (242)
367 1c5d_H Monoclonal antibody aga 99.6 1.1E-14 3.8E-19 107.6 9.2 119 144-262 10-165 (215)
368 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.2E-14 7.6E-19 95.4 9.6 96 133-228 6-123 (126)
369 1bec_A 14.3.D T cell antigen r 99.6 3.7E-14 1.2E-18 106.5 12.0 123 141-264 6-166 (238)
370 2cqv_A MLCK, myosin light chai 99.6 5.6E-14 1.9E-18 93.0 11.4 90 10-107 4-102 (114)
371 4acp_A IG gamma-1 chain C regi 99.6 6.2E-16 2.1E-20 116.0 2.0 167 13-205 22-217 (240)
372 1dee_B IGM RF 2A2; FAB-IBP com 99.6 2.2E-14 7.5E-19 106.7 10.4 120 144-263 10-171 (223)
373 1pz5_B Heavy chain of FAB (SYA 99.6 1.3E-14 4.3E-19 107.7 8.9 119 143-261 9-167 (220)
374 1ow0_A IG alpha-1 chain C regi 99.6 3.6E-16 1.2E-20 115.6 0.5 157 23-206 12-200 (214)
375 3kvq_A Vascular endothelial gr 99.6 3.1E-14 1E-18 93.3 9.7 77 141-217 17-100 (108)
376 3nl4_H Antigen binding fragmen 99.6 1.4E-14 4.6E-19 107.2 8.8 119 144-262 9-163 (215)
377 3uzq_A Anti-dengue MAB 4E11; d 99.6 3.4E-14 1.2E-18 107.7 11.2 118 141-258 8-174 (253)
378 1wit_A Twitchin 18TH IGSF modu 99.6 2.3E-14 7.7E-19 91.3 8.5 75 141-215 9-92 (93)
379 3eow_R Poliovirus receptor; im 99.6 6.3E-15 2.1E-19 109.4 6.8 115 143-261 8-157 (221)
380 2fbj_H IGA-kappa J539 FAB (hea 99.5 2.4E-14 8.1E-19 106.3 9.8 118 144-262 10-166 (220)
381 2dm2_A Palladin; beta-sandwich 99.5 7.6E-14 2.6E-18 91.7 10.8 82 137-218 11-103 (110)
382 1l6x_A Immunoglobulin gamma-1 99.5 8.1E-15 2.8E-19 107.7 6.5 118 147-264 16-154 (207)
383 3bfo_A Mucosa-associated lymph 99.5 5E-14 1.7E-18 89.2 9.4 76 140-215 9-85 (91)
384 2xqy_G A13-D6.3 monoclonal ant 99.5 2.8E-14 9.6E-19 108.6 9.4 121 142-262 14-172 (261)
385 2dav_A SLOW MYBP-C, myosin-bin 99.5 5.2E-14 1.8E-18 93.6 9.4 90 13-104 7-111 (126)
386 3to4_D NKT vbeta2 (mouse varia 99.5 3.1E-14 1.1E-18 107.9 9.5 123 141-264 8-169 (253)
387 2edn_A Myosin-binding protein 99.5 3.8E-14 1.3E-18 93.2 8.4 91 13-105 12-117 (118)
388 1oga_E TRBC1, T-cell receptor 99.5 1.3E-13 4.5E-18 104.4 12.2 124 140-264 9-168 (252)
389 4fmk_A Poliovirus receptor-rel 99.5 1.4E-13 4.9E-18 101.8 12.1 118 142-262 9-163 (225)
390 3ux9_B SCFV antibody; five hel 99.5 1.2E-13 4.2E-18 104.8 11.9 116 142-258 10-173 (256)
391 1g1c_A Immunoglobulin-like dom 99.5 5.3E-14 1.8E-18 90.6 8.4 76 141-216 12-97 (99)
392 1wit_A Twitchin 18TH IGSF modu 99.5 5.6E-14 1.9E-18 89.4 8.2 87 12-102 1-92 (93)
393 2gjj_A A21 single-chain antibo 99.5 1.6E-13 5.5E-18 104.6 12.1 117 141-258 12-177 (264)
394 2kdg_A Myotilin; immonoglobuli 99.5 7.3E-14 2.5E-18 90.1 8.8 76 141-216 12-97 (100)
395 2kkq_A Myotilin; unknown funct 99.5 7.8E-14 2.7E-18 92.6 9.0 91 10-107 12-112 (116)
396 1dn0_B IGM-kappa cold agglutin 99.5 1E-13 3.6E-18 103.6 10.7 120 144-263 10-171 (232)
397 2ckn_A Basic fibroblast growth 99.5 1E-13 3.4E-18 88.6 9.0 84 11-102 7-94 (95)
398 2edj_A Roundabout homolog 2; K 99.5 1.3E-13 4.5E-18 88.9 9.5 78 139-216 13-97 (100)
399 3m8o_H Immunoglobulin A1 heavy 99.5 6.6E-14 2.2E-18 103.9 9.2 118 143-262 9-167 (221)
400 1mq8_A ICAM-1, intercellular a 99.5 8.6E-15 2.9E-19 112.4 4.4 158 26-216 97-281 (291)
401 3cx2_A Myosin-binding protein 99.5 4.3E-13 1.5E-17 87.8 12.0 86 13-103 4-107 (108)
402 2ckn_A Basic fibroblast growth 99.5 1.9E-13 6.6E-18 87.2 10.0 80 135-215 10-94 (95)
403 2kkq_A Myotilin; unknown funct 99.5 1.3E-13 4.6E-18 91.4 9.5 84 134-217 15-109 (116)
404 2ens_A Advanced glycosylation 99.5 3E-14 1E-18 91.2 6.1 77 139-215 15-91 (96)
405 2yr3_A Myosin light chain kina 99.5 6E-14 2.1E-18 90.4 7.5 92 4-102 2-98 (99)
406 1u2h_A APEG-1, aortic preferen 99.5 8.6E-14 2.9E-18 89.6 8.2 76 141-216 12-97 (99)
407 1ow0_A IG alpha-1 chain C regi 99.5 2.2E-15 7.5E-20 111.4 0.3 123 141-265 11-153 (214)
408 3cx2_A Myosin-binding protein 99.5 1.7E-13 5.6E-18 89.8 9.3 82 135-216 5-107 (108)
409 3bn9_D E2 FAB heavy chain; ant 99.5 4.3E-14 1.5E-18 107.2 7.4 119 144-262 10-176 (257)
410 2eo9_A Roundabout homolog 1; b 99.5 2.3E-13 7.7E-18 90.6 10.1 92 10-108 5-102 (118)
411 3qp3_A Titin; I-SET IG-like, s 99.5 9.6E-14 3.3E-18 90.1 8.1 77 141-217 15-100 (103)
412 3u1s_H FAB PGT145 heavy chain; 99.5 5.9E-14 2E-18 107.2 8.1 159 23-209 31-257 (267)
413 2dm3_A KIAA0992 protein, palla 99.5 3.8E-14 1.3E-18 93.2 6.2 81 138-218 13-103 (110)
414 2yr3_A Myosin light chain kina 99.5 8.1E-14 2.8E-18 89.7 7.4 75 141-215 18-98 (99)
415 2bk8_A Connectin, M1, titin he 99.5 3.8E-13 1.3E-17 86.2 10.4 77 141-217 8-94 (97)
416 2xot_A Amphoterin-induced prot 99.5 1.8E-13 6.2E-18 109.1 10.6 99 141-254 253-360 (361)
417 1hxm_B Gamma-delta T-cell rece 99.5 2.1E-13 7.3E-18 102.6 10.2 123 141-263 8-177 (242)
418 2aty_A Complement receptor chi 99.5 1.5E-13 5.3E-18 110.1 9.9 119 146-264 180-319 (376)
419 3irg_A Titin; IG-like, titin, 99.5 1.3E-13 4.3E-18 88.9 7.6 86 12-103 4-98 (100)
420 3liz_H 4C3 monoclonal antibody 99.5 1.1E-13 3.7E-18 104.9 8.4 118 144-261 10-166 (253)
421 2yuz_A Myosin-binding protein 99.5 3E-13 1E-17 87.1 9.2 80 133-216 6-94 (100)
422 3puc_A Titin; I-SET IG-like do 99.5 1.9E-13 6.6E-18 87.9 8.3 76 141-216 13-97 (99)
423 2dm2_A Palladin; beta-sandwich 99.5 1.2E-13 4.1E-18 90.8 7.1 91 10-107 5-105 (110)
424 3irg_B Obscurin-like protein 1 99.5 2.5E-13 8.5E-18 88.7 8.4 76 141-216 20-104 (107)
425 2edj_A Roundabout homolog 2; K 99.5 2.4E-13 8.4E-18 87.6 8.3 89 10-105 5-99 (100)
426 2gki_A Nuclease; anti-DNA anti 99.5 4.5E-13 1.6E-17 103.6 10.9 116 143-258 31-202 (291)
427 3mtr_A N-CAM-1, NCAM-1, neural 99.5 1.6E-12 5.4E-17 96.0 13.3 115 142-261 26-157 (215)
428 3bn3_B ICAM-5, intercellular a 99.5 4.8E-13 1.6E-17 96.0 10.1 152 15-205 4-174 (196)
429 3qp3_A Titin; I-SET IG-like, s 99.5 2.5E-13 8.4E-18 88.1 7.9 87 11-105 6-101 (103)
430 1g1c_A Immunoglobulin-like dom 99.5 2.6E-13 8.8E-18 87.3 7.9 86 11-104 3-98 (99)
431 1nct_A Titin; cell adhesion, g 99.5 9E-14 3.1E-18 90.7 5.7 80 137-216 17-105 (106)
432 2yuz_A Myosin-binding protein 99.5 2.6E-13 8.8E-18 87.4 7.7 87 10-107 4-98 (100)
433 1gl4_B Basement membrane-speci 99.4 9.5E-13 3.3E-17 84.5 10.2 77 140-216 16-97 (98)
434 1gxe_A Myosin binding protein 99.4 5.2E-13 1.8E-17 91.1 9.4 76 141-216 25-138 (139)
435 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 5.1E-13 1.8E-17 102.1 10.5 118 141-258 22-190 (268)
436 2kdg_A Myotilin; immonoglobuli 99.4 3.5E-13 1.2E-17 86.9 8.0 87 12-104 4-98 (100)
437 3irg_A Titin; IG-like, titin, 99.4 3.3E-13 1.1E-17 86.9 7.9 76 141-216 12-98 (100)
438 3kvq_A Vascular endothelial gr 99.4 3.6E-13 1.2E-17 88.1 8.0 89 10-106 7-102 (108)
439 2lu7_A Obscurin-like protein 1 99.4 5.6E-13 1.9E-17 82.7 8.4 69 143-216 5-82 (84)
440 1waa_A Titin; metal binding pr 99.4 5.9E-13 2E-17 84.4 8.7 82 11-104 3-92 (93)
441 3irg_B Obscurin-like protein 1 99.4 3.3E-13 1.1E-17 88.1 7.7 87 11-105 11-106 (107)
442 2e7c_A Myosin-binding protein 99.4 9.8E-13 3.3E-17 87.5 10.0 75 142-216 32-114 (118)
443 2edn_A Myosin-binding protein 99.4 4.1E-13 1.4E-17 88.3 7.9 83 135-217 13-116 (118)
444 3caf_A Fibroblast growth facto 99.4 4.7E-13 1.6E-17 86.3 7.9 74 142-215 16-99 (100)
445 1fhg_A Telokin; immunoglobulin 99.4 5.2E-13 1.8E-17 93.2 8.5 74 143-216 50-133 (154)
446 2cr3_A Basic fibroblast growth 99.4 1.1E-12 3.9E-17 84.3 9.2 74 142-216 11-89 (99)
447 1he7_A High affinity nerve gro 99.4 5.5E-13 1.9E-17 88.6 7.7 69 148-216 14-98 (126)
448 1x44_A Myosin-binding protein 99.4 1.2E-12 4E-17 84.9 9.1 83 13-107 7-99 (103)
449 1u2h_A APEG-1, aortic preferen 99.4 3.2E-13 1.1E-17 86.9 6.2 86 12-104 4-98 (99)
450 1gl4_B Basement membrane-speci 99.4 1.8E-12 6E-17 83.2 9.6 83 13-103 9-97 (98)
451 3puc_A Titin; I-SET IG-like do 99.4 6.9E-13 2.4E-17 85.3 7.7 85 12-104 5-98 (99)
452 1x44_A Myosin-binding protein 99.4 1.6E-12 5.5E-17 84.2 9.5 80 133-217 6-96 (103)
453 3s35_X Vascular endothelial gr 99.4 4.4E-13 1.5E-17 89.7 6.7 82 144-228 18-118 (122)
454 3m45_A Cell adhesion molecule 99.4 1.6E-12 5.4E-17 84.9 9.2 91 12-105 5-107 (108)
455 1waa_A Titin; metal binding pr 99.4 1.8E-12 6.2E-17 82.1 9.0 78 134-216 5-91 (93)
456 1ypz_F T-cell receptor gamma c 99.4 9.3E-13 3.2E-17 98.3 8.7 123 141-263 8-175 (230)
457 3s35_X Vascular endothelial gr 99.4 3.3E-12 1.1E-16 85.5 10.3 90 23-112 16-118 (122)
458 1nct_A Titin; cell adhesion, g 99.4 4.2E-13 1.4E-17 87.5 5.7 85 11-103 12-105 (106)
459 4hwu_A Fibroblast growth facto 99.4 2.8E-12 9.5E-17 81.8 9.4 75 141-217 8-87 (95)
460 1wwb_X Protein (brain derived 99.4 1.3E-12 4.5E-17 84.6 7.9 70 147-216 14-97 (103)
461 3shs_A HOC head outer capsid p 99.4 5E-12 1.7E-16 93.4 11.8 119 144-264 12-143 (304)
462 1fhg_A Telokin; immunoglobulin 99.4 2.5E-12 8.5E-17 89.8 9.6 91 10-108 38-138 (154)
463 3fku_X Neutralizing antibody F 99.4 3.6E-12 1.2E-16 98.0 11.4 116 141-257 7-177 (280)
464 3caf_A Fibroblast growth facto 99.4 1.2E-12 4E-17 84.4 7.2 89 12-102 3-99 (100)
465 2dm3_A KIAA0992 protein, palla 99.4 1.4E-12 4.6E-17 85.6 7.4 91 11-107 7-105 (110)
466 4hwu_A Fibroblast growth facto 99.4 3.2E-12 1.1E-16 81.5 8.8 77 23-105 9-88 (95)
467 2lvc_A Obscurin-like protein 1 99.4 4.2E-12 1.4E-16 80.0 8.9 58 145-203 17-83 (91)
468 2e7c_A Myosin-binding protein 99.4 2.6E-12 9E-17 85.4 8.2 90 12-106 20-117 (118)
469 2lvc_A Obscurin-like protein 1 99.4 4E-12 1.4E-16 80.1 8.4 71 13-89 4-82 (91)
470 2edf_A Obscurin; beta-sandwich 99.4 4.3E-12 1.5E-16 82.2 8.8 79 134-217 8-95 (103)
471 3tv3_H PGT128 heavy chain, IG 99.4 1.9E-12 6.4E-17 97.2 8.0 119 144-262 10-183 (239)
472 2eny_A Obscurin; beta-sandwich 99.4 5.3E-12 1.8E-16 81.9 9.1 85 11-107 6-100 (104)
473 3qhz_H Human monoclonal antibo 99.4 1.9E-12 6.7E-17 96.7 7.9 117 145-261 11-174 (232)
474 2edf_A Obscurin; beta-sandwich 99.3 3.6E-12 1.2E-16 82.5 8.1 85 11-107 6-98 (103)
475 2xot_A Amphoterin-induced prot 99.3 2.1E-12 7.3E-17 102.9 8.4 102 23-166 254-359 (361)
476 3u2s_H PG9 heavy chain; greek 99.3 2.4E-12 8.1E-17 97.2 8.0 119 143-261 8-183 (248)
477 2yuv_A Myosin-binding protein 99.3 9.7E-12 3.3E-16 80.0 9.6 86 10-106 4-97 (100)
478 2k1m_A Myosin-binding protein 99.3 1.5E-11 5E-16 78.4 10.2 81 11-103 6-94 (95)
479 1gxe_A Myosin binding protein 99.3 3.6E-12 1.2E-16 86.9 7.6 81 23-103 26-138 (139)
480 2e6p_A Obscurin-like protein 1 99.3 5.7E-12 1.9E-16 81.8 8.2 69 144-217 20-97 (104)
481 3so5_A LIG-3, leucine-rich rep 99.3 5E-12 1.7E-16 83.0 7.9 81 135-215 11-111 (112)
482 1iam_A ICAM-1, CD54, intercell 99.3 3.5E-11 1.2E-15 85.7 12.5 119 141-263 6-131 (185)
483 2edk_A Myosin-binding protein 99.3 1.1E-12 3.6E-17 84.8 4.3 89 10-104 5-99 (101)
484 2dlt_A Myosin binding protein 99.3 5.9E-12 2E-16 82.0 8.0 78 136-216 10-96 (106)
485 2bk8_A Connectin, M1, titin he 99.3 1.4E-11 4.7E-16 78.8 9.4 76 23-104 9-94 (97)
486 2dm7_A KIAA1556 protein; beta- 99.3 2E-11 6.8E-16 79.7 10.3 84 11-106 6-96 (108)
487 3so5_A LIG-3, leucine-rich rep 99.3 6.4E-12 2.2E-16 82.5 8.0 90 11-102 8-111 (112)
488 2ens_A Advanced glycosylation 99.3 2.6E-12 9.1E-17 82.1 6.0 82 8-102 5-93 (96)
489 2cr6_A KIAA1556 protein, obscu 99.3 6E-12 2.1E-16 83.2 7.7 76 137-216 16-101 (115)
490 2cr3_A Basic fibroblast growth 99.3 5.2E-12 1.8E-16 81.2 7.2 78 23-106 11-92 (99)
491 2edk_A Myosin-binding protein 99.3 2.6E-12 8.9E-17 82.9 5.7 78 134-216 8-98 (101)
492 2edh_A Obscurin; structural ge 99.3 2E-11 6.9E-16 80.4 10.0 84 12-107 18-108 (113)
493 2eny_A Obscurin; beta-sandwich 99.3 1.5E-11 5.3E-16 79.6 9.1 81 133-217 7-97 (104)
494 2lu7_A Obscurin-like protein 1 99.3 4.9E-12 1.7E-16 78.4 6.4 72 23-104 4-83 (84)
495 2v5y_A Receptor-type tyrosine- 99.3 4.4E-11 1.5E-15 104.1 14.7 177 29-246 90-285 (731)
496 3qr2_A Basigin; CD147, EMMPRIN 99.3 6.5E-12 2.2E-16 85.8 7.5 72 137-208 24-117 (137)
497 2k1m_A Myosin-binding protein 99.3 3.7E-11 1.3E-15 76.5 10.5 75 137-216 11-94 (95)
498 4f9p_D 103.2 anti-BTN3A1 antib 99.3 3.1E-10 1E-14 82.7 16.4 171 24-202 9-228 (254)
499 2e6p_A Obscurin-like protein 1 99.3 8.9E-12 3E-16 80.8 7.5 89 11-107 5-100 (104)
500 4f9l_D 20.1 anti-BTN3A1 antibo 99.3 4E-11 1.4E-15 87.8 11.5 167 23-202 9-231 (259)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.1e-33 Score=219.08 Aligned_cols=221 Identities=23% Similarity=0.389 Sum_probs=176.3
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... ...............|.|.+++..|+|.|+|
T Consensus 3 ~~pP~~~~~p--~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 3 MAPPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR--PGGNYKMTLVENTATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCCEEEECC--CCEEEETTCCEEEEEEEESSSCCEEEEEETTEECC--SSSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEccc--cceEecCCCcEEEEEEEEcCCCCEEEEEECCEECc--CCCcEEEEEcCCEEEEEEecCCcccCEEEEE
Confidence 4689998888 7889999999999999987 99999633211 1101111111235689999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+.|..+..+..+.|.|..++...... .....+.+|+.+.|.|.+.+.|.+.
T Consensus 79 ~~~n~~g~~~~~~~l~V~~~p~~~~~~----------------------------~~~~~v~~g~~~~l~C~~~g~p~~~ 130 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQEPPRFIKKL----------------------------EPSRIVKQDEHTRYECKIGGSPEIK 130 (284)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEECC----------------------------CSEEEEETTCCEEEEEEEESSSCCE
T ss_pred EEEECCceEEEEEEEEccCCCcccccC----------------------------CCceEecCCceEEEEEEEeeeCCCE
Confidence 999998888888888887654422211 1223578899999999999999999
Q ss_pred EEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecC
Q psy3045 166 ISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPG 236 (267)
Q Consensus 166 ~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g 236 (267)
+.|++++..+.... ...|.|.++..+|+|.|+|.+.|..+.......+.|. .+|.+...+....+.+|
T Consensus 131 v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~~~~~~~~~g 207 (284)
T 2rik_A 131 VLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK---EPPVFRKKPHPVETLKG 207 (284)
T ss_dssp EEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE---CCCBCCSCCCCEEECTT
T ss_pred EEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe---cCCcceeCCCcceecCC
Confidence 99999998876442 3568999999999999999999999887777777776 57888777777788999
Q ss_pred CcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 237 PNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 237 ~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+.|.|.+.|.|.|.+.|+++|+.+..+.
T Consensus 208 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~ 237 (284)
T 2rik_A 208 ADVHLECELQGTPPFQVSWHKDKRELRSGK 237 (284)
T ss_dssp CCEEEEEECBSSSCCEEEEEETTEEECBTT
T ss_pred CeEEEEEEEEecCCCEEEEEECCEECcCCC
Confidence 999999999999999999999999887553
No 2
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-33 Score=217.86 Aligned_cols=224 Identities=26% Similarity=0.435 Sum_probs=171.0
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE------EeeEEEEeeccc-
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ------VSGTLIIKEAKV- 77 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~- 77 (267)
+..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... ..+... ....|.|.+++.
T Consensus 3 ~~~~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~-------~~~~~~~~~~~~~~~~L~i~~~~~~ 73 (304)
T 2yd9_A 3 GEEPPRFIKEP--KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVN-------SQRFETIEFDESAGAVLRIQPLRTP 73 (304)
T ss_dssp -CCCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEC--------------CTTEEEEEETTTTEEEEEECSCCTT
T ss_pred CccCCeeeecC--CceEecCCCeEEEEEEEEEeCCCeEEEEECCEECC-------CCceEEEEecCCCceEEEEeccccc
Confidence 46789999888 7899999999999999987 99999643221 112111 125799999998
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccC-CceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVE-PTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~-~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.|+|.|+|.+.|..|.....+.|.|...+..... +.. ...+....+..|+.+.|.|
T Consensus 74 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i-----------------------~~~~~~~~v~~g~~v~l~C 130 (304)
T 2yd9_A 74 RDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNI-----------------------DMGPQLKVVERTRTATMLC 130 (304)
T ss_dssp TTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEE-----------------------EECCCCEEEETTSCEEECC
T ss_pred CCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCee-----------------------ecCCccEEEeCCCeEEEEE
Confidence 9999999999999888777888888765332111 111 1122334788899999999
Q ss_pred EeCCCCCceEEEEECCccCCCC---------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEE-EEEEEecccCCCeeec
Q psy3045 157 KYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS-GELKLGGRFDPPVIKE 226 (267)
Q Consensus 157 ~~~~~p~~~~~W~~~~~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~-~~l~v~~~~~~p~~~~ 226 (267)
.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+..... ..+.+.+...+|.+..
T Consensus 131 ~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~ 210 (304)
T 2yd9_A 131 AASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSI 210 (304)
T ss_dssp EEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEE
T ss_pred ECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEe
Confidence 9999999999999999876532 34589999999999999999999988765432 4566654445788887
Q ss_pred CCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 227 SFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+
T Consensus 211 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~ 249 (304)
T 2yd9_A 211 LPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPE 249 (304)
T ss_dssp CCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCS
T ss_pred cCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCc
Confidence 777778899999999999999999999999999998754
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3e-32 Score=230.41 Aligned_cols=222 Identities=23% Similarity=0.404 Sum_probs=175.1
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceE--EE--EeeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRV--KQ--VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~--~~--~~~~l~i~~~~~~d~G 81 (267)
..||.|...+ .++.+.+|+++.|.|.+.+ +.|+|++.... ...+. .. ...+|.|.++..+|+|
T Consensus 3 ~~pP~f~~~~--~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~------~~~~~~~~~~~~~~~L~I~~v~~~D~G 74 (570)
T 3b43_A 3 MEPPYFIEPL--EHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLR------SAPAYKMQFKNNVASLVINKVDHSDVG 74 (570)
T ss_dssp CCCCEEEECC--CCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCC------CCSSEEEECCTTEEEEEESSCCGGGCE
T ss_pred CCCCcceEEC--CceEEcCCCEEEEEEEEccCCCCEEEEEECCEEcc------CCCCEEEEEECCEEEEEEccCChhhCE
Confidence 4689998776 7899999999999999987 99999743221 11222 11 2368999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
.|+|.+.|..|.......+.|..... .+ .+........+..|+.+.|.|.+.|.
T Consensus 75 ~Y~C~a~N~~g~~~~~~~l~v~~~~~---~p-----------------------~~~~~~~~~~~~~G~~v~l~C~~~g~ 128 (570)
T 3b43_A 75 EYTCKAENSVGAVASSAVLVIKERKL---PP-----------------------SFARKLKDVHETLGFPVAFECRINGS 128 (570)
T ss_dssp EEEEEEEETTEEEEEEEEEEECCCCC---CC-----------------------EESSCCCCEEEETTSCEEEEEEEESS
T ss_pred EEEEEEEeCCceEEEEEEEEECCCCC---CC-----------------------cccccCCCeEecCCCeEEEEEEEccC
Confidence 99999999988766666666643211 00 01111223367789999999999999
Q ss_pred CCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeE
Q psy3045 162 PVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDET 232 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~ 232 (267)
|++.+.|+++|..+.... ...|.|..+..+|+|.|+|.|.|..+....+..+.+.....+|.+...+....
T Consensus 129 p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~ 208 (570)
T 3b43_A 129 EPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVD 208 (570)
T ss_dssp SSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBC
T ss_pred CCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeE
Confidence 999999999998886432 25788999999999999999999998887788888876556888888887778
Q ss_pred EecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 233 LNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 233 ~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+|+.+.|.|.+.|.|+|.+.|+|+|+.+..+.
T Consensus 209 v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~ 242 (570)
T 3b43_A 209 LALGESGTFKCHVTGTAPIKITWAKDNREIRPGG 242 (570)
T ss_dssp CBSBSCEEEEEEEESSSCCEEEEEETTEECCTTS
T ss_pred ecCCCeEEEEEEEEECCCCEEEEEECCEECcCCC
Confidence 8999999999999999999999999999987543
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.6e-31 Score=225.98 Aligned_cols=213 Identities=23% Similarity=0.388 Sum_probs=172.3
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceE--E--EEeeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRV--K--QVSGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~--~--~~~~~l~i~~~~~~d~G 81 (267)
..+|.|..... ....+.+|+.+.|.|.+.+ +.|++++... ....++ . .....|.|.+++.+|+|
T Consensus 288 ~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l------~~~~~~~~~~~~~~~~L~i~~v~~~D~G 360 (570)
T 3b43_A 288 QEPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEI------QESSKFRMSFVESVAVLEMYNLSVEDSG 360 (570)
T ss_dssp BCCCEEEECCC-SBCCEESSCEEEEEEEEESSSSCEEEEEETTEEC------CCSSSEEEEEETTEEEEEEESCCGGGCE
T ss_pred ecCCcccccCC-CccEEcCCCcEEEEEEEeeCCCCEEEEeECCEEC------CCCCcEEEEEECCEEEEEECCCCcccCE
Confidence 44677665442 3456889999999999988 9999963321 111221 1 12457999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
.|+|.|.|..|.......|.|..++.+...+.. ..+.+|+.+.|.|.+.|.
T Consensus 361 ~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~-----------------------------~~~~~G~~v~l~C~~~g~ 411 (570)
T 3b43_A 361 DYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHP-----------------------------VETLKGADVHLECELQGT 411 (570)
T ss_dssp EEEEEEEBTTBCCEEEEEECEECCCEECSCCCC-----------------------------EEECTTCCEEEEEEEESS
T ss_pred EEEEEEEeCCCEEEEEEEEEecCCCeeecCCCc-----------------------------eeecCCCEEEEEEEEecC
Confidence 999999999999888889988876654443332 267789999999999999
Q ss_pred CCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeE
Q psy3045 162 PVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDET 232 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~ 232 (267)
|.+.+.|++++..+..+.. ..|.|.++..+|+|.|+|.|.|..|.......+.+. .+|.+...+.+..
T Consensus 412 P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~---~~P~~~~~~~~~~ 488 (570)
T 3b43_A 412 PPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK---APPRFVKKLSDIS 488 (570)
T ss_dssp SSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC---CCCEEEECCCCBC
T ss_pred CCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec---cCCcccccCCCce
Confidence 9999999999988764422 468899999999999999999999988888888776 6888888888888
Q ss_pred EecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 233 LNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 233 ~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
+.+|+.+.|.|.+.|.|++.+.|+++|..+
T Consensus 489 ~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~ 518 (570)
T 3b43_A 489 TVVGEEVQLQATIEGAEPISVAWFKDKGEI 518 (570)
T ss_dssp CBTTCCEEEEEEEESCSSCCCEEEETTEEC
T ss_pred ecCCCeEEEEEEEecCCCCEEEEEeCCeEe
Confidence 899999999999999999999999998654
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=2e-31 Score=207.08 Aligned_cols=215 Identities=27% Similarity=0.408 Sum_probs=161.0
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE-----EeeEEEEeecccCCCe
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ-----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d~G 81 (267)
||.|...| .+..+.+|+++.|.|.+.+ +.|++.+. .... ....++.. ....|.|.+++.+|+|
T Consensus 2 ~~~v~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g-~~~~---~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 75 (291)
T 1qz1_A 2 VLQVDIVP--SQGEISVGESKFFLCQVAGDAKDKDISWFSPNG-EKLS---PNQQRISVVWNDDDSSTLTIYNANIDDAG 75 (291)
T ss_dssp CCCEEEES--SSEEEETTCCEEEEEEESSCCSCCEEEEECTTS-CBCC---SSCSSEEEEEEETTEEEEEECSCCGGGCE
T ss_pred CcceEecC--CCceEeCCCeEEEEEEeCCCCCCcEeEEECCCC-eECc---cCCceEEEEEcCCCeEEEEEecCCCCCCE
Confidence 56777777 7888999999999999887 99998311 1111 11222222 2468999999999999
Q ss_pred eEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 82 KYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 82 ~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
.|+|.+.+..+. .+..+.|.|..++.....+ ....+.+|+.+.|.|.+.+
T Consensus 76 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~-----------------------------~~~~~~~g~~v~l~C~~~~ 126 (291)
T 1qz1_A 76 IYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP-----------------------------TPQEFKEGEDAVIVCDVVS 126 (291)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECCSEEEECC-----------------------------SSEEEETTSCEEECCEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEEeeccccccCCC-----------------------------CcccccCCCeEEEEEEecc
Confidence 999999998865 4566667766544322222 2236788999999999999
Q ss_pred CCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE--EEEEEEecccCCCeeecCCc-
Q psy3045 161 NPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA--SGELKLGGRFDPPVIKESFS- 229 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~--~~~l~v~~~~~~p~~~~~~~- 229 (267)
.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.|..+.... ...+.+. .+|.+.....
T Consensus 127 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~---~~p~~~~~~~~ 203 (291)
T 1qz1_A 127 SLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN---VPPTVQARQSI 203 (291)
T ss_dssp SSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE---EEEEEEESCSE
T ss_pred CCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe---cCCcccccccc
Confidence 999999999999876432 3467999999999999999999987644333 3444443 3555554433
Q ss_pred -eeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 230 -DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 230 -~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
...+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+
T Consensus 204 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~ 240 (291)
T 1qz1_A 204 VNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENE 240 (291)
T ss_dssp EEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred cccccccCceEEEEEEEEEeCCCcEEEEECCEECcCC
Confidence 446778999999999999999999999999998765
No 6
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=8.3e-32 Score=217.24 Aligned_cols=246 Identities=24% Similarity=0.438 Sum_probs=175.0
Q ss_pred CCCcccCCCCceeEEe---cCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeec-ccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKK---PGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEA-KVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v---~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~ 82 (267)
.+|.|...| .+..+ .+|+++.|.|.+.+ +.|++++.... .....++...++.|.|.+. ..+|+|.
T Consensus 4 ~~P~f~~~P--~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~----~~~~~~~~~~~g~l~i~~~~~~~D~G~ 77 (384)
T 3kld_A 4 SGPVFVQEP--SHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVD----IGMDFRYSVVDGSLLINNPNKTQDAGT 77 (384)
T ss_dssp EEEEEEECC--CCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECC----C----CEEEETTEEEEESCCHHHHCEE
T ss_pred CCCEEEeCC--cceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECc----CCCCccEEEECCEEEEcCCCCcccCEE
Confidence 468888887 55555 68999999999987 99999643221 1123344555667888776 7789999
Q ss_pred EEEEEEcCCCcc-EEEEEEEEEecccccc-CCceEEEeCCCceEEEEE--------------------------------
Q psy3045 83 YLCVVNNSVGGE-SVETVLTVTAPLAAGV-EPTVQTIDFGRPAQFTCK-------------------------------- 128 (267)
Q Consensus 83 Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~-~~~~~~~~~~~~~~~~c~-------------------------------- 128 (267)
|+|.|.|..|.. +....+.+...+.... .........|..+.|.|.
T Consensus 78 Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 157 (384)
T 3kld_A 78 YQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG 157 (384)
T ss_dssp EEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTC
T ss_pred EEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCC
Confidence 999999998763 3344555543322221 112233444555555553
Q ss_pred ------------------eecCC--------Cc----------------ccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 129 ------------------YEISP--------PL----------------AAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 129 ------------------~~~~~--------~~----------------~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
+.... +. .....+....+.+|+.+.|.|.+.|.|.|.+
T Consensus 158 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i 237 (384)
T 3kld_A 158 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI 237 (384)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEE
T ss_pred cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcE
Confidence 22110 00 0011233445778999999999999999999
Q ss_pred EEEEC-CccCCC-----CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEE
Q psy3045 167 SWMKD-GKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYY 240 (267)
Q Consensus 167 ~W~~~-~~~~~~-----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~ 240 (267)
.|+++ +..+.. .....|.|.++..+|+|.|+|.|.|..|.......+.+. .+|.+...+.+..+.+|+.+.
T Consensus 238 ~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~---~~P~~~~~~~~~~v~~g~~v~ 314 (384)
T 3kld_A 238 LWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY---AQPNWVQIINDIHVAMEESVF 314 (384)
T ss_dssp EEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---EEEEEEECCCCEEECTTCCEE
T ss_pred EEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEe---cCCccccCCCceEecCCCCEE
Confidence 99995 444432 235689999999999999999999999888878888776 467777777778899999999
Q ss_pred EEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 241 FKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 241 l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
|.|.+.|.|.|.|.|+|||+.+..++
T Consensus 315 l~C~~~g~P~p~i~W~k~g~~l~~~~ 340 (384)
T 3kld_A 315 WECKANGRPKPTYRWLKNGDPLLTRD 340 (384)
T ss_dssp EECEEEEESCCEEEEEETTEECCCBT
T ss_pred EEeECCccCCCeEEEEECCEECCCCc
Confidence 99999999999999999999987654
No 7
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-31 Score=204.85 Aligned_cols=218 Identities=25% Similarity=0.413 Sum_probs=161.0
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y 83 (267)
.+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++. .. +....++... ...|.|.+++.+|+|.|
T Consensus 3 ~~p~v~~~~--~~~~v~~G~~v~l~C~~~~~p~~v~W~~~~g-~~----~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 75 (291)
T 2wim_A 3 ALLQVTISL--SKVELSVGESKFFTCTAIGEPESIDWYNPQG-EK----IISTQRVVVQKEGVRSRLTIYNANIEDAGIY 75 (291)
T ss_dssp CCCEEEESC--SEEEEETTCCEEEEEEEESCCSEEECBCTTC-CB----CCCBTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCceEEEec--cceEecCCCcEEEEEEEeCCCCceEEECCCC-cC----ccCCCcEEEecCCCEEEEEEccCCcccCEEE
Confidence 468888888 7899999999999999998 99998422 11 1122333221 25899999999999999
Q ss_pred EEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 84 LCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 84 ~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
+|.+.+..|.. ...+.|.|...+.....+. ...+.+|+.+.|.|.+.+.|
T Consensus 76 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~-----------------------------~~~v~~G~~v~l~C~~~~~p 126 (291)
T 2wim_A 76 RCQATDAKGQTQEATVVLEIYQKLTFREVVS-----------------------------PQEFKQGEDAEVVCRVSSSP 126 (291)
T ss_dssp EEEEECSSSCEEEEEEEEEEECCCBCCSCCC-----------------------------SEEEETTSCEEECCCCBCSS
T ss_pred EEEEecccCceEEEEEEEEecCCcceEeCCC-----------------------------ChhhcCCCCEEEEEEEccCC
Confidence 99999988774 4566677765544333222 22678899999999999999
Q ss_pred CceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCc--eeE
Q psy3045 163 VKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFS--DET 232 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~--~~~ 232 (267)
.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.+..+.......+.+.+. .+|.+..... ...
T Consensus 127 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~-~~p~~~~~~~~~~~~ 205 (291)
T 2wim_A 127 APAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN-VPPAISMPQKSFNAT 205 (291)
T ss_dssp CCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-BCCCCBCSCSEEECC
T ss_pred CCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEec-cCCccccCcccccce
Confidence 9999999998876531 3467999999999999999999998755443333333332 4566555443 345
Q ss_pred EecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 233 LNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 233 ~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+.
T Consensus 206 ~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~ 239 (291)
T 2wim_A 206 AERGEEMTFSCRASGSPEPAISWFRNGKLIEENE 239 (291)
T ss_dssp SSSCCEEEEECBCCCBSCCEEEEEETTEECCCTT
T ss_pred ecCCCeEEEEEEeecCCCCeEEEEECCEECcCCc
Confidence 7789999999999999999999999999987653
No 8
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=8.6e-31 Score=213.31 Aligned_cols=240 Identities=14% Similarity=0.205 Sum_probs=159.7
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEE
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVN 88 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 88 (267)
+.+...+ .++.|.+|+++.|.|.+.+ +.|++++.............+ ...+|.|.+++.+|+|.|+|.|.
T Consensus 49 ~~~~~~~--~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~---~~~sL~I~~v~~~D~G~Y~C~a~ 123 (423)
T 3qs7_E 49 SGTVYEA--AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNR---GVVSMVILKMTETQAGEYLLFIQ 123 (423)
T ss_dssp ---------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC--------CEEEEEESSCCSSSCSEEEEEEE
T ss_pred Ccceecc--ccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccc---eEEEEEEeecCcccCEEEEEEEE
Confidence 3444455 5899999999999999998 899986321111111111111 12369999999999999999999
Q ss_pred cCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcc--------------------------------
Q psy3045 89 NSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLA-------------------------------- 136 (267)
Q Consensus 89 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-------------------------------- 136 (267)
|..|.....+.|.|..++.... ........+..+.|.|.+.+.|++.
T Consensus 124 N~~g~~~~~~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d 202 (423)
T 3qs7_E 124 SEATNYTILFTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELF 202 (423)
T ss_dssp C--CEEEEEEEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCC
T ss_pred cCCCcEEEEEEEEEecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEeccc
Confidence 9988877777777764332210 1111122344444445443221110
Q ss_pred ---------------------------cccCCceEEEecCCCEEEEeEeCC-CCCceEEEEECCccCCCCC---------
Q psy3045 137 ---------------------------AGVEPTVQTIDFGRPAQFTCKYEG-NPVKTISWMKDGKPVPDHN--------- 179 (267)
Q Consensus 137 ---------------------------~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~~~~~~~~~--------- 179 (267)
....+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+....
T Consensus 203 ~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~ 282 (423)
T 3qs7_E 203 GTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYST 282 (423)
T ss_dssp SSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEET
T ss_pred CeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccC
Confidence 001233567788999999999998 5678999999998875421
Q ss_pred ------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCC--ceeEEecCCcEEEEEEeecCCCC
Q psy3045 180 ------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESF--SDETLNPGPNYYFKCIASGNPTP 251 (267)
Q Consensus 180 ------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~ 251 (267)
...|.|.++..+|+|.|+|.|.|. ...+..|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 283 ~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~---~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p 356 (423)
T 3qs7_E 283 NRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV---EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI 356 (423)
T ss_dssp TTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEE---SSCEEEEC---CEECCCTTCCCCEEEEEEEESCC
T ss_pred CceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEE---eCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC
Confidence 136999999999999999999998 5556667765 456555443 35567889999999999999999
Q ss_pred cEEEEECCEEcCCC
Q psy3045 252 EISWYLDGKKLVNA 265 (267)
Q Consensus 252 ~i~W~~~~~~l~~~ 265 (267)
.|.|+|+|+.|..+
T Consensus 357 ~i~W~k~g~~l~~~ 370 (423)
T 3qs7_E 357 RCTWTFSRKSFPCE 370 (423)
T ss_dssp EEEEEETTEEEECB
T ss_pred eEEEEECCEECCCc
Confidence 99999999998654
No 9
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.98 E-value=4.8e-31 Score=212.59 Aligned_cols=246 Identities=26% Similarity=0.409 Sum_probs=183.4
Q ss_pred CCCcccCCCCceeEEe---cCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeeccc-CCCee
Q psy3045 12 KAPTFSSVSDIIRFKK---PGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKV-EDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v---~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~ 82 (267)
.+|.|...| .+..+ .+|+++.|.|.+.+ +.|++++.... .....++...+++|.|.++.. +|+|.
T Consensus 3 ~~P~~~~~p--~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~----~~~~~~~~~~~~~L~i~~~~~~~D~G~ 76 (382)
T 1cs6_A 3 YGPVFEEQP--AHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELK----MGPDSRYRLVAGDLVISNPVKAKDAGS 76 (382)
T ss_dssp EEEEEEECC--CCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECC----CSTTSSEEEETTEEEEESCCHHHHCEE
T ss_pred CCCEEEECC--CcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECC----cCCCccEEeeCCeEEEecccccccCEE
Confidence 478898888 55555 79999999999986 99999643211 112345556677899999987 99999
Q ss_pred EEEEEEcCCCcc-EEEEEEEEEecccccc-CCceEEEeCCCceEEEEEeecC----------------------------
Q psy3045 83 YLCVVNNSVGGE-SVETVLTVTAPLAAGV-EPTVQTIDFGRPAQFTCKYEIS---------------------------- 132 (267)
Q Consensus 83 Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~---------------------------- 132 (267)
|+|.+.|..|.. +....|.|...+.... .........|..+.|.|.+...
T Consensus 77 Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 156 (382)
T 1cs6_A 77 YQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQT 156 (382)
T ss_dssp EEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTT
T ss_pred EEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecC
Confidence 999999987753 3345666654433222 2334445566666666653210
Q ss_pred ------------------------C-------------------------CcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 133 ------------------------P-------------------------PLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 133 ------------------------~-------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
. |......+....+.+|+.+.|.|.+.+.|.
T Consensus 157 ~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 236 (382)
T 1cs6_A 157 TGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPV 236 (382)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESC
T ss_pred ceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCC
Confidence 0 000001123556778999999999999999
Q ss_pred ceEEEEECCccCCC---CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEE
Q psy3045 164 KTISWMKDGKPVPD---HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYY 240 (267)
Q Consensus 164 ~~~~W~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~ 240 (267)
+.+.|++++..+.. .....|.|.++..+|+|.|+|.|.|..+.......+.|. .+|.+...+....+.+|+.+.
T Consensus 237 ~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~ 313 (382)
T 1cs6_A 237 PQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH---AQPDWLDVITDTEADIGSDLR 313 (382)
T ss_dssp CEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---EEEEEEECCCCEEEETTCCEE
T ss_pred CEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEe---cCCCcccCCCccEEcCCCeEE
Confidence 99999998877653 356789999999999999999999998887777777776 467777777777899999999
Q ss_pred EEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 241 FKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 241 l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
|.|.+.|.|.|.+.|+++|+.+..++
T Consensus 314 l~C~~~g~p~p~v~W~~~g~~~~~~~ 339 (382)
T 1cs6_A 314 WSCVASGKPRPAVRWLRDGQPLASQN 339 (382)
T ss_dssp EECEEEEESCCEEEEEETTEECCCCS
T ss_pred EEEEeeeecCCEEEEEECCEECCCCc
Confidence 99999999999999999999987654
No 10
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.98 E-value=9.5e-31 Score=229.94 Aligned_cols=225 Identities=67% Similarity=1.129 Sum_probs=185.3
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
.+|.+...+......+.+|+++.|.|.+.+ +.|++++++...........++...+++|.|.+++.+|+|.|+|.
T Consensus 245 ~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 324 (816)
T 3dmk_A 245 AVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCV 324 (816)
T ss_dssp CCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEE
T ss_pred CCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEE
Confidence 356665554335688999999999999988 999997665554445556667766778999999999999999999
Q ss_pred EEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 87 VNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
+.|..|.......|.|..++.....+ ....+.+|+.+.|.|.+.+.|.+.+
T Consensus 325 a~n~~g~~~~~~~l~V~~~~~~~~~~-----------------------------~~~~v~~G~~v~l~C~~~g~p~~~v 375 (816)
T 3dmk_A 325 VNNSVGGESVETVLTVTAPLSAKIDP-----------------------------PTQTVDFGRPAVFTCQYTGNPIKTV 375 (816)
T ss_dssp EECSSCEEEEEEEEEECEEEEEEEES-----------------------------SEEECCTTSCEEEEEEEEEECCCEE
T ss_pred EEcCCCceEEEEEEEEcCCCceeeCC-----------------------------CceEecCCCCEEEEEEEeccCCCEE
Confidence 99999888777778777644332222 2337888999999999999999999
Q ss_pred EEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEee
Q psy3045 167 SWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS 246 (267)
Q Consensus 167 ~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 246 (267)
.|+++|..+.. ....|.|.++..+|+|.|+|.+.|..+....+..+.+.....+|.+...+....+.+|+.+.|.|.+.
T Consensus 376 ~W~k~g~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~ 454 (816)
T 3dmk_A 376 SWMKDGKAIGH-SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAG 454 (816)
T ss_dssp EEEETTEECSC-CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEE
T ss_pred EEEECCEECCC-CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEe
Confidence 99999998854 45789999999999999999999998877777777776656788888877777899999999999999
Q ss_pred cCCCCcEEEEECCEEcCCCC
Q psy3045 247 GNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 247 ~~p~~~i~W~~~~~~l~~~~ 266 (267)
|.|.|.+.|+++|..+..++
T Consensus 455 g~p~p~v~W~~~g~~l~~~~ 474 (816)
T 3dmk_A 455 GNPTPEISWELDGKKIANND 474 (816)
T ss_dssp CSSCCEEEEEETTEECCSCT
T ss_pred cCCCCEEEEEECCEECCCCC
Confidence 99999999999999987543
No 11
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.98 E-value=8.7e-31 Score=212.48 Aligned_cols=249 Identities=24% Similarity=0.394 Sum_probs=185.8
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEe----ecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIK----EAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~----~~~~~d~G 81 (267)
..+|.|...+. .+..+.+|+++.|.|.+.+ +.|++++.... ............+++|.|. +++.+|+|
T Consensus 14 ~~~P~i~~~~~-~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~--~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G 90 (404)
T 3p3y_A 14 TQPPTITKQSA-KDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFN--IAKDPRVSMRRRSGTLVIDFRSGGRPEEYEG 90 (404)
T ss_dssp CCCCCEEEECC-TTCEECSSSCCCCCEEECCSSCCEEEEEETTEECC--GGGCSSCBCCSSSCCCBCCCTTTCCTTSSCE
T ss_pred cCCCcccccCC-ccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEee--eecCCcceEecCCceEEEEeccCCCCccCCE
Confidence 35787776432 6788999999999999987 99999643211 1111111122234456554 78889999
Q ss_pred eEEEEEEcCCCcc-EEEEEEEEEeccccc-cCCceEEEeCCCceEEEEEeecC-CCcc----------------------
Q psy3045 82 KYLCVVNNSVGGE-SVETVLTVTAPLAAG-VEPTVQTIDFGRPAQFTCKYEIS-PPLA---------------------- 136 (267)
Q Consensus 82 ~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~-~~~~---------------------- 136 (267)
.|+|.+.|..|.. +..+.|.|...+... ..........|+.+.|.|.+..+ +...
T Consensus 91 ~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 170 (404)
T 3p3y_A 91 EYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHN 170 (404)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTT
T ss_pred EEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCC
Confidence 9999999998875 467778887655433 23334567788889998876211 1000
Q ss_pred ---------------------------------------------------ccc---CCceEEEecCCCEEEEeEeCCCC
Q psy3045 137 ---------------------------------------------------AGV---EPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 137 ---------------------------------------------------~~~---~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
+.. ......+.+|+.+.|.|.+.+.|
T Consensus 171 ~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p 250 (404)
T 3p3y_A 171 GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVP 250 (404)
T ss_dssp SCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSS
T ss_pred CcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCC
Confidence 000 00234577899999999999999
Q ss_pred CceEEEEECCccCCCCC------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecC
Q psy3045 163 VKTISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPG 236 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g 236 (267)
.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+.......+.|. .+|.+...+....+.+|
T Consensus 251 ~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~~~~~~v~~g 327 (404)
T 3p3y_A 251 TPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK---AAPYWLDEPKNLILAPG 327 (404)
T ss_dssp CCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE---EEEEEEECCCCEEECTT
T ss_pred CCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe---CCCeeeccCCcceeecC
Confidence 99999999999886543 5789999999999999999999999887777777776 46777777878889999
Q ss_pred CcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 237 PNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 237 ~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
+.+.|.|.+.|.|.|.+.|+++|..+..+
T Consensus 328 ~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (404)
T 3p3y_A 328 EDGRLVCRANGNPKPTVQWMVNGEPLQSA 356 (404)
T ss_dssp CCEEEECEEEEESCCEEEEEETTEEGGGS
T ss_pred CcEEEEEEccccCCCceEEEECCEecCCC
Confidence 99999999999999999999999998654
No 12
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=5.1e-31 Score=213.27 Aligned_cols=247 Identities=20% Similarity=0.312 Sum_probs=175.4
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 84 (267)
..||.|...+ .++.+.+|+++.|.|.+.+ +.|++++.... .... .......+++|.|.+++.+|+|.|+
T Consensus 4 ~~~P~~~~~p--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~--~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~ 78 (395)
T 1bih_A 4 DKYPVLKDQP--AEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYN--WQEH-NAALRKDEGSLVFLRPQASDEGHYQ 78 (395)
T ss_dssp -CCCEECCCC--SEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCC--TTTT-TEEECTTSCCEEESSCCGGGCEEEE
T ss_pred CCCCEeecCC--CceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcc--cccc-eEEEecCCceEEEecCCCCCCcEEE
Confidence 4689999888 7899999999999999876 99999643221 1100 1112224568999999999999999
Q ss_pred EEEEcCCCccE-EEEEEEEEeccccccCCceEEEeCCCceE---------------------------------------
Q psy3045 85 CVVNNSVGGES-VETVLTVTAPLAAGVEPTVQTIDFGRPAQ--------------------------------------- 124 (267)
Q Consensus 85 C~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 124 (267)
|.+.|..|... ..+.|.|...+.+...+.......|+.+.
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 1bih_A 79 CFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAG 158 (395)
T ss_dssp EEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC
T ss_pred EEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEc
Confidence 99999877532 33444443322222222222222333444
Q ss_pred --------------------EEEEeecCCCcc---------c---------------ccCCceEEEecCCCEEEEeEeCC
Q psy3045 125 --------------------FTCKYEISPPLA---------A---------------GVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 125 --------------------~~c~~~~~~~~~---------~---------------~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
+.|.+....... . ...+....+.+|+.+.|.|.+.+
T Consensus 159 ~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g 238 (395)
T 1bih_A 159 PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGS 238 (395)
T ss_dssp TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEEC
T ss_pred CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEecc
Confidence 444433221100 0 00123456788999999999999
Q ss_pred CCCceEEEEECCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEEecccCCCeeecCC
Q psy3045 161 NPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRFDPPVIKESF 228 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~ 228 (267)
.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+.... ...|.|. .+|.+...+
T Consensus 239 ~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~---~~P~~~~~~ 315 (395)
T 1bih_A 239 NPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV---SAPKYEQKP 315 (395)
T ss_dssp SSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE---EEEEEEECC
T ss_pred CCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE---cCCccccCC
Confidence 999999999999877532 1237999999999999999999999888655 7777776 577777776
Q ss_pred ce-eEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 229 SD-ETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 229 ~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+
T Consensus 316 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 353 (395)
T 1bih_A 316 EKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG 353 (395)
T ss_dssp CSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS
T ss_pred CcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC
Confidence 66 67899999999999999999999999999988653
No 13
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=2.3e-30 Score=210.01 Aligned_cols=224 Identities=23% Similarity=0.377 Sum_probs=171.9
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceE-EEEeeEEEEeecccCCCeeEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRV-KQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
.+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... . .....+. ...++.|.|.+++.+|+|.|+|
T Consensus 120 ~p~~~~~~~--~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~--~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 194 (403)
T 3laf_A 120 GPLRFLSQT--ESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLN--P-IPGDSRVVVLPSGALQISRLQPGDSGVYRC 194 (403)
T ss_dssp CCCEECSCC--CCEEEETTSCEEECCCEECSSCCEEEEEESSSBCC--C-CTTCCSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred CCCccccCC--CcEEEEcCCeEEEEEEEcccCCCeEEEEECCEecc--c-cCCceEEEEcCCceEEEcccccccCEEEEE
Confidence 467776666 6889999999999999977 99999643221 1 1112222 2235689999999999999999
Q ss_pred EEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 86 VVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 86 ~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
.+.+..+. ......+.|...+.....+.. ...+....+.+|+.+.|.|.+.+.|.+
T Consensus 195 ~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~-----------------------~~~~~~~~~~~g~~~~l~C~~~~~p~~ 251 (403)
T 3laf_A 195 SARNPASTRTGNEAEVRILSDPGLHRQLYF-----------------------LQRPSNVIAIEGKDAVLECCVSGYPPP 251 (403)
T ss_dssp EEECSSCCCBCCCEEEEEECCCCCCEEEEE-----------------------EECCCCEEEETTSCEEECCEEEEESCC
T ss_pred EEEcCCCceeccceeEEEecCCCcccCceE-----------------------ecCCCceEecCCCcEEEEEEcCCCCCC
Confidence 99998775 345566666654432111111 112233467889999999999999999
Q ss_pred eEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCC
Q psy3045 165 TISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGP 237 (267)
Q Consensus 165 ~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~ 237 (267)
.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+....+..+.|. .+|.+...+....+.+|+
T Consensus 252 ~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~ 328 (403)
T 3laf_A 252 SFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL---VPPWFLNHPSNLYAYESM 328 (403)
T ss_dssp EEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE---EEEEEEECCCCEECCTTC
T ss_pred eEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE---CCCcEeecCcceEEecCC
Confidence 99999999877543 24679999999999999999999998887777777776 467777777778889999
Q ss_pred cEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 238 NYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 238 ~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
.+.|.|.+.|.|.|.+.|+++|+.+..++
T Consensus 329 ~v~l~C~~~g~p~p~v~W~~~g~~~~~~~ 357 (403)
T 3laf_A 329 DIEFECAVSGKPVPTVNWMKNGDVVIPSD 357 (403)
T ss_dssp CEEECCEEEEESCCEEEEEETTEECCCSS
T ss_pred eEEEEEEEeeccCCEEEEEECCEECCCCC
Confidence 99999999999999999999999886553
No 14
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=6.6e-30 Score=206.33 Aligned_cols=246 Identities=20% Similarity=0.303 Sum_probs=178.9
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeee-cccCcceeccccCCceEEEEeeEEEEeecccCC------
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFK-FIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVED------ 79 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d------ 79 (267)
.+|.|...|. ..+.+.+|+.+.|.|.+.+ +.|++ ++..... ....+....+++|.|.+++..|
T Consensus 2 ~~P~f~~~p~-~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~----~~~~~~~~~~~~L~i~~~~~~d~~~~~d 76 (388)
T 2v5m_A 2 KGPVFLKEPT-NRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGD----VPGLRQISSDGKLVFPPFRAEDYRQEVH 76 (388)
T ss_dssp EEEEEEECCC-SEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCC----BTTTBEECSTTEEEECCCCGGGCCHHHH
T ss_pred CCCchhhCCC-ceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCcccc----CCCceEEcCCceEEecccChhhcccccc
Confidence 3688888873 4577899999999999987 99999 4221110 0112233345689999999987
Q ss_pred CeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCc-----------------------
Q psy3045 80 SGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPL----------------------- 135 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~----------------------- 135 (267)
+|.|+|.+.|..|.. +..+.+.+...+.....+.......|..+.|.|.+...++.
T Consensus 77 ~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 156 (388)
T 2v5m_A 77 AQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG 156 (388)
T ss_dssp EEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred CceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence 999999999988763 45566666655544444444455556666666654321100
Q ss_pred -------------------------------------------c--------------cccCCceEEEecCCCEEEEeEe
Q psy3045 136 -------------------------------------------A--------------AGVEPTVQTIDFGRPAQFTCKY 158 (267)
Q Consensus 136 -------------------------------------------~--------------~~~~~~~~~~~~g~~v~l~C~~ 158 (267)
. .........+.+|+.+.|.|.+
T Consensus 157 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~ 236 (388)
T 2v5m_A 157 KYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA 236 (388)
T ss_dssp TEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC
T ss_pred cEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC
Confidence 0 0001122356779999999999
Q ss_pred CCCCCceEEEEECCccCCC------C-----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecC
Q psy3045 159 EGNPVKTISWMKDGKPVPD------H-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKES 227 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~------~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~ 227 (267)
.+.|.+.+.|++++..+.. . ....|.|.++..+|+|.|+|.|.|..+.......|.|. .+|.+...
T Consensus 237 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~ 313 (388)
T 2v5m_A 237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT---APLSAKID 313 (388)
T ss_dssp EEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE---EEEEEEEE
T ss_pred CCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEe---CCCccccC
Confidence 9999999999998644321 1 24689999999999999999999999887777777776 46666666
Q ss_pred CceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 228 FSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 228 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
+....+.+|+.+.|.|.+.|.|.|.|.|+++|+.+..+
T Consensus 314 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~ 351 (388)
T 2v5m_A 314 PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS 351 (388)
T ss_dssp SSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC
T ss_pred CCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC
Confidence 77778999999999999999999999999999998654
No 15
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.3e-29 Score=195.41 Aligned_cols=207 Identities=17% Similarity=0.239 Sum_probs=160.0
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ......+..|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~P~i~~~~--~~~~v~~G~~v~l~C~~~~~i~W~~~~~~~---------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 78 (290)
T 2o26_X 10 PSPPSIHPAQ--SELIVEAGDTLSLTCIDPDFVRWTFKTYFN---------EMVENKKNEWIQEKAEATRTGTYTCSNSN 78 (290)
T ss_dssp --CCEESSCS--SEEEEETTSCEEEEEECTTEEEEEEECSSS---------CEEEECSSEEEETTCCGGGCEEEEEEESS
T ss_pred CCCCEEeCCC--CeEEEcCCCcEEEEECCCCcEEEecCCcce---------eeecCCCceEEEeccCHHhCeEEEEEeeC
Confidence 5679998766 7899999999999999998 9999974322 11112237899999999999999999998
Q ss_pred CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC-ceEEE
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV-KTISW 168 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~~W 168 (267)
|. ...+.|.|..++.....+ ....+.+|+.+.|.|.+.+ |. +.+.|
T Consensus 79 --g~-~~~~~l~V~~~~~~~~~~-----------------------------~~~~~~~g~~v~l~C~~~~-p~~~~v~W 125 (290)
T 2o26_X 79 --GL-TSSIYVFVRDPAKLFLVG-----------------------------LPLFGKEDSDALVRCPLTD-PQVSQYSL 125 (290)
T ss_dssp --SC-EEEEEEEEECSSCCBCCC-----------------------------CCEEEETTSCEEECCCBSC-CSCEEEEE
T ss_pred --Cc-cEEEEEEEeCCCcccccc-----------------------------cceEEecCCeEEEeCcCCC-CCCceEEE
Confidence 43 677778887654433222 2236778999999999985 77 89999
Q ss_pred E-ECCccCCCC------CCCeEEeccCCCCCCe-EEEEEEEcCCCCceE-EEEEEEec-ccCCCeeecCCceeEEecCCc
Q psy3045 169 M-KDGKPVPDH------NEPVFRIDSVRKEDKG-MYQCVIRNEQESAQA-SGELKLGG-RFDPPVIKESFSDETLNPGPN 238 (267)
Q Consensus 169 ~-~~~~~~~~~------~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~-~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~ 238 (267)
+ +++..+... ....|.|.++..+|+| .|+|.|.|..+.... .+.+.|.. ...+|.+...+....+.+|+.
T Consensus 126 ~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~ 205 (290)
T 2o26_X 126 IECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDT 205 (290)
T ss_dssp EETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCC
T ss_pred EeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCc
Confidence 5 678777543 3468999999999999 999999998544222 35565542 236788887777778899999
Q ss_pred EEEEEEeecCCCCc-EEEEECCEE
Q psy3045 239 YYFKCIASGNPTPE-ISWYLDGKK 261 (267)
Q Consensus 239 ~~l~C~~~~~p~~~-i~W~~~~~~ 261 (267)
+.|.|.+.|.|.|. +.|+++|..
T Consensus 206 v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 206 FTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp EEEEEEEEESSTTCEEEEEEESSS
T ss_pred EEEEEEEecCCcceeEEEecCCCC
Confidence 99999999999996 999999976
No 16
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=3.3e-29 Score=209.96 Aligned_cols=237 Identities=18% Similarity=0.254 Sum_probs=179.2
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
..||.|...+ ....+.+|++++|.|.+.+ +.|++++... . ......+|.|.+++.+|+|.|+|.+.+
T Consensus 34 ~~pP~i~~~~--~~~~v~~G~~v~l~C~~~~~v~W~~~~~~~--------~--~~~~~~~L~I~~~~~~D~G~Y~C~a~n 101 (524)
T 2ec8_A 34 PSPPSIHPGK--SDLIVRVGDEIRLLCTDPGFVKWTFEILDE--------T--NENKQNEWITEKAEATNTGKYTCTNKH 101 (524)
T ss_dssp CCCCEEESCC--SEEECCTTSCEEEEEECTTEEEEEEESSSC--------C--EEECSSEEEESSCCSTTCEEEEEEETT
T ss_pred CCCCccCCCC--ceEEEeCCCeEEEEEeCCceEEEcCCCccc--------c--ccCccceEEEcccchhhCEEEEEeecC
Confidence 4678887766 7899999999999999999 9999974321 1 333457899999999999999999988
Q ss_pred CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCC------------------------------------
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISP------------------------------------ 133 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~------------------------------------ 133 (267)
| .+..+.|.|..++.....+.......|+.+.|.|.+...+
T Consensus 102 --g-~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~ 178 (524)
T 2ec8_A 102 --G-LSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRA 178 (524)
T ss_dssp --S-CEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGG
T ss_pred --C-cceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchh
Confidence 4 3667777777554443333334444555555555543221
Q ss_pred --------------------------------CcccccCCceEEEecCCCEEEEeEeCCCCCce-EEEEECCccC--CC-
Q psy3045 134 --------------------------------PLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT-ISWMKDGKPV--PD- 177 (267)
Q Consensus 134 --------------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~-~~W~~~~~~~--~~- 177 (267)
++.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+ ..
T Consensus 179 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~ 258 (524)
T 2ec8_A 179 YHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK 258 (524)
T ss_dssp GTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE
T ss_pred hCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc
Confidence 11122233445688899999999999888775 9999999883 21
Q ss_pred -----------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCC---ceeEEecCCcEEEEE
Q psy3045 178 -----------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESF---SDETLNPGPNYYFKC 243 (267)
Q Consensus 178 -----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~---~~~~~~~g~~~~l~C 243 (267)
.....|.|.++..+|+|.|+|.|.|..+.......|.|. .+|.+...+ ....+.+|+.+.|.|
T Consensus 259 ~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~---~~p~~~~~~~~~~~~~v~~G~~v~l~C 335 (524)
T 2ec8_A 259 YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV---DKGFINIFPMINTTVFVNDGENVDLIV 335 (524)
T ss_dssp EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEE---SSCEEEEEESSCSEEEECTTCCEEEEE
T ss_pred cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEe---ccCceEeecCCCceEEEcCCCcEEEEE
Confidence 124679999999999999999999999888777777776 466665543 367889999999999
Q ss_pred EeecCCCCc-EEEEECCEEcCCC
Q psy3045 244 IASGNPTPE-ISWYLDGKKLVNA 265 (267)
Q Consensus 244 ~~~~~p~~~-i~W~~~~~~l~~~ 265 (267)
.+.|.|.|. +.|+++|+.+..+
T Consensus 336 ~~~g~P~p~~v~W~k~g~~~~~~ 358 (524)
T 2ec8_A 336 EYEAFPKPEHQQWIYMNRTFTDK 358 (524)
T ss_dssp EEEEESCCCEEEEESSSCBCSSS
T ss_pred EEeecCCCcEEEEEECCeeccCC
Confidence 999999998 9999999988654
No 17
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=205.82 Aligned_cols=223 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEec-------c-----eeeeecccCcceeccccCCceEEEEeeEEEEeeccc
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQ-------E-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKV 77 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~-------~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 77 (267)
...+|.|...+ .++.+.+|+++.|.|.+. + +.|++++... ........++...+++|.|.+++.
T Consensus 15 ~~~~p~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~ 90 (339)
T 3o4o_C 15 ARSCRFRGRHY--KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSAR--TVPGEEETRMWAQDGALWLLPALQ 90 (339)
T ss_dssp ---CEEEEECS--CCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCS--CCSCCSSSCEEEETTEEEESSBCT
T ss_pred chhhHhhCcCc--eEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCc--ccCccccccEEeeCCeEEECCCCc
Confidence 34568888887 799999999999999997 5 9999964321 112222456666778999999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
+|+|.|+|.+.+..+.....+.|.|...+........ ....+..|+.+.|.|.
T Consensus 91 ~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~---------------------------~~~~~~~g~~v~l~C~ 143 (339)
T 3o4o_C 91 EDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFIS---------------------------YPQILTLSTSGVLVCP 143 (339)
T ss_dssp TCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHC---------------------------EEEEEETTSCEEEECC
T ss_pred ccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccc---------------------------cceEEECCCCEEEEec
Confidence 9999999999998887788888888765432211111 1126778999999999
Q ss_pred -----eCCCCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCC----ceEEEEEEEeccc-
Q psy3045 158 -----YEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQES----AQASGELKLGGRF- 219 (267)
Q Consensus 158 -----~~~~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~----~~~~~~l~v~~~~- 219 (267)
+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+. ......+.|....
T Consensus 144 ~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~ 223 (339)
T 3o4o_C 144 DLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE 223 (339)
T ss_dssp SCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC
T ss_pred CCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC
Confidence 778889999999999888654 2358999999999999999999998763 3445666665321
Q ss_pred -CCCeeecCCceeEEecCCcEEEEEEe---ecCC-CCcEEEEECCEEcC
Q psy3045 220 -DPPVIKESFSDETLNPGPNYYFKCIA---SGNP-TPEISWYLDGKKLV 263 (267)
Q Consensus 220 -~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p-~~~i~W~~~~~~l~ 263 (267)
.+|.+...+....+.+|+.+.|.|.+ .|.| .+.+.|+++|..+.
T Consensus 224 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~ 272 (339)
T 3o4o_C 224 ETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIE 272 (339)
T ss_dssp CCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSS
T ss_pred CCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecc
Confidence 35677776666778899999999999 8999 78999999998764
No 18
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=6.6e-30 Score=203.57 Aligned_cols=217 Identities=18% Similarity=0.281 Sum_probs=149.5
Q ss_pred eeEEecCCCeEEEEEEec---------------c-eeeeecccCcceecccc---CCceEEEEeeEEEEeecccCCCeeE
Q psy3045 23 IRFKKPGGESFALLCEAQ---------------E-NMWFKFIEGSSRKVAVP---LNDRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~---------------~-~~W~~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
.++.+.+|+++.|.|.+. . +.|++++.......... ...++...+..|.|.+++.+|+|.|
T Consensus 15 ~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (349)
T 4dep_C 15 RQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNY 94 (349)
T ss_dssp CCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEE
T ss_pred eeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEE
Confidence 678899999999999987 2 99999753222222222 3456666778999999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-----
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY----- 158 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~----- 158 (267)
+|.+.|..+.....+.|.|...+....... ..+....+..|+.+.|.|.+
T Consensus 95 ~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~-------------------------~~~~~~~~~~g~~~~l~C~~~~~~~ 149 (349)
T 4dep_C 95 TCMLRNTTYCSKVAFPLEVVQKDSCFNSPM-------------------------KLPVHKLYIEYGIQRITCPNVDGYF 149 (349)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTSCCSC-------------------------CCCEEEEETTCSEEEEECCSCTTSS
T ss_pred EEEEecCCceEEEEEEEEEecCCcccCccc-------------------------ccCcceeeecCccEEEEcCCCcccc
Confidence 999999888777788888876443221111 01223367789999999975
Q ss_pred CCCCCceEEEEECCccCCCC-----CCCeEEeccCCCCCCeEEEEEEEcCC-CCc---eEEEEEEEecccC---CCeeec
Q psy3045 159 EGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQ-ESA---QASGELKLGGRFD---PPVIKE 226 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~---~~~~~l~v~~~~~---~p~~~~ 226 (267)
.+.|.+.+.|++++..+... .+..|.|.++..+|+|.|+|.|.|.. +.. ...+.+.+..... +|.+..
T Consensus 150 ~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~ 229 (349)
T 4dep_C 150 PSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHS 229 (349)
T ss_dssp CTTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC-
T ss_pred cCCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEec
Confidence 67789999999999988642 24679999999999999999999986 433 3445555543211 566665
Q ss_pred CCcee--EEecCCcEEEEEEee----cCCCCcEEEEECCEEcCC
Q psy3045 227 SFSDE--TLNPGPNYYFKCIAS----GNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 227 ~~~~~--~~~~g~~~~l~C~~~----~~p~~~i~W~~~~~~l~~ 264 (267)
..... .+.+|+.+.|.|.+. |.|.|.+.|+++|+.+..
T Consensus 230 ~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 230 PNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp ---------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred CCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 55433 678899999999998 578899999999988765
No 19
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=206.55 Aligned_cols=229 Identities=19% Similarity=0.272 Sum_probs=159.9
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 84 (267)
..+|.|... .+..+.+|+++.|.|.+.+ +.|++++.... .. ...++......|.|.+++.+|+|.|+
T Consensus 5 ~~~P~~~~~---~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~--~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~ 77 (317)
T 2y25_A 5 FTGPHFVEY---LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREIS--VD--EKHDFKDGICTLLITEFSKKDAGIYE 77 (317)
T ss_dssp SSCCEEEEE---EEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEEC--CS--CC-----CCEEEEETTCCSTTCSCEE
T ss_pred cCCCcEeee---eeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcC--CC--CcEEEECCeEEEEEccCCcccCeEEE
Confidence 467888743 4689999999999999876 99999632211 11 11122233468999999999999999
Q ss_pred EEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC-CCC
Q psy3045 85 CVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG-NPV 163 (267)
Q Consensus 85 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~ 163 (267)
|.+.+..+.....+.|.|...+.....+.......|..+.+.|. .+...|.|.+.+ .|.
T Consensus 78 C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~--------------------~~~~~l~c~~~~~~p~ 137 (317)
T 2y25_A 78 VILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQST--------------------AEGIQLYSFVTYYVED 137 (317)
T ss_dssp EEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEEC--------------------SSEEEEEEEBSSCCSS
T ss_pred EEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEee--------------------ccccEEEEEeccCCCC
Confidence 99999888766655555443322221212222234555555553 233566777665 578
Q ss_pred ceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec-----------------
Q psy3045 164 KTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG----------------- 217 (267)
Q Consensus 164 ~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~----------------- 217 (267)
+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+....+..+.+..
T Consensus 138 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 217 (317)
T 2y25_A 138 LKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 217 (317)
T ss_dssp CEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccC
Confidence 8999999999886432 23499999999999999999999888777666665431
Q ss_pred ccCCCe-eecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 218 RFDPPV-IKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 218 ~~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
...+|. +...+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..++
T Consensus 218 ~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 267 (317)
T 2y25_A 218 EKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD 267 (317)
T ss_dssp TTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS
T ss_pred cCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC
Confidence 011233 3334556788999999999999999999999999999887654
No 20
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=3.8e-29 Score=193.97 Aligned_cols=216 Identities=22% Similarity=0.222 Sum_probs=159.2
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcC
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNS 90 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 90 (267)
.+|.|...+ ..+.+.+|++++|.|.+.+ +.|++++.... ..........|.|.+++..|+|.|+|.+.+.
T Consensus 3 p~p~i~~~~--~~~~v~~G~~v~L~C~~~~~v~W~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 3 PAPVIEPSG--PELVVEPGETVTLRCVSNGSVEWDGPISPYW-------TLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp -CCEEESCS--SEEEECTTCCEEEEEECSSCCEEECSCSSSS-------EECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CCcEecCCC--ceEEECCCCCEEEEEEeCCcEEEccCCCceE-------EEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 467777776 7899999999999999999 99998532211 0111123468999999999999999999988
Q ss_pred CCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc-eEEEE
Q psy3045 91 VGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK-TISWM 169 (267)
Q Consensus 91 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~ 169 (267)
.+..+..+.|.|..++.... ..+....+.+|+.+.|.|.+.+.+.+ .+.|+
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~----------------------------~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~ 125 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDPAHSWN----------------------------LLAQEVTVVEGQEAVLPCLITDPALKDSVSLM 125 (289)
T ss_dssp ----CEEEEEEECCSSCSEE----------------------------ESCSEEEEETTSCEEECEEESCGGGGGSEEEE
T ss_pred CCcceeEEEEEEeCCCccee----------------------------cccceEEEecCCceEeEEEccCCCcceEEEEE
Confidence 88778888888876543210 11233478889999999999987655 49998
Q ss_pred E-CCccCCCC------CCCeEEeccCCCCCCeEEEEEEE-cCCCCceEEEEEEEecc-cCCCeeecCCceeEEecCCcEE
Q psy3045 170 K-DGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIR-NEQESAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYY 240 (267)
Q Consensus 170 ~-~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~ 240 (267)
+ ++..+... ....|.|.++..+|+|.|+|.+. +..+.....+.+.|... ..+|.+...+....+.+|+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~ 205 (289)
T 3ejj_X 126 REGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQ 205 (289)
T ss_dssp EGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEE
T ss_pred ecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEE
Confidence 7 55555332 34679999999999999999999 44444444566666532 1467888777777778999999
Q ss_pred EEEEeec-CCCCcEEEEECCEEcCC
Q psy3045 241 FKCIASG-NPTPEISWYLDGKKLVN 264 (267)
Q Consensus 241 l~C~~~~-~p~~~i~W~~~~~~l~~ 264 (267)
|.|.+.+ .|.+.+.|+++|..+..
T Consensus 206 l~C~~~~~~p~~~i~W~~~~~~~~~ 230 (289)
T 3ejj_X 206 IVCSATNAEVGFNVILKRGDTKLEI 230 (289)
T ss_dssp EEEEEEESSSCCEEEEEETTEECCC
T ss_pred EEEEeCCCCCceEEEEEECCEEeec
Confidence 9999998 78899999999998864
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=1.6e-29 Score=211.85 Aligned_cols=215 Identities=23% Similarity=0.381 Sum_probs=162.7
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCc--ceeccccC-CceEEEEeeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGS--SRKVAVPL-NDRVKQVSGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~--~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G 81 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ........ ........+.|.|.+++.+|+|
T Consensus 209 ~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 286 (524)
T 2ec8_A 209 KAVPVVSVSK--ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG 286 (524)
T ss_dssp CSCCEEECSC--SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCE
T ss_pred CCCCcEEecC--CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCE
Confidence 3678888877 6779999999999999987 8999975431 11111111 1112345678999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
.|+|.+.|..|.....+.|.|..++.....+. ......+.+|+.+.|.|.+.+.
T Consensus 287 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~--------------------------~~~~~~v~~G~~v~l~C~~~g~ 340 (524)
T 2ec8_A 287 VFMCYANNTFGSANVTTTLEVVDKGFINIFPM--------------------------INTTVFVNDGENVDLIVEYEAF 340 (524)
T ss_dssp EEEEEEECSSCEEEEEEEEEEESSCEEEEEES--------------------------SCSEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEEecCCceEEEEEEEEeccCceEeecC--------------------------CCceEEEcCCCcEEEEEEEeec
Confidence 99999999999888888888886544322211 0123478899999999999999
Q ss_pred CCce-EEEEECCccCCCCC--------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeec
Q psy3045 162 PVKT-ISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 226 (267)
Q Consensus 162 p~~~-~~W~~~~~~~~~~~--------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~ 226 (267)
|.+. +.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+....++.|.|. .+|.+..
T Consensus 341 P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~---~~P~i~~ 417 (524)
T 2ec8_A 341 PKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVN---TKPEILT 417 (524)
T ss_dssp SCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC---EEEEEEE
T ss_pred CCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEe---cCCeEee
Confidence 9888 99999998876432 2479999999999999999999999988878888775 4666655
Q ss_pred CCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 227 SFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
.+. ..+| .|.|.+.|.|.|.|.|+++|..+
T Consensus 418 ~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 418 YDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp EEC---CSSS---CEEEEEEEESCCEEECCCC----
T ss_pred ccc---CcCc---EEEEEEEeecCCEEEEEECCCcc
Confidence 432 3345 89999999999999999998665
No 22
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=1.6e-29 Score=198.60 Aligned_cols=216 Identities=21% Similarity=0.291 Sum_probs=160.1
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEE
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV 96 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (267)
..+.+.+|+++.|.|.+.+ +.|++++... ........++...+++|.|.+++.+|+|.|+|.+.|..+....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKT--PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI 90 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCS--CSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcC--ccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEE
Confidence 4678999999999999877 9999964322 1222334555556678999999999999999999998877665
Q ss_pred EEEEEEEec-cccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe------CCCCCceEEEE
Q psy3045 97 ETVLTVTAP-LAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY------EGNPVKTISWM 169 (267)
Q Consensus 97 ~~~l~V~~~-~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~------~~~p~~~~~W~ 169 (267)
.+.+.+... +.....+.. .....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 91 ~~~v~v~~~~p~~~~~~~~--------------------------~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~ 144 (315)
T 1itb_B 91 KISAKFVENEPNLCYNAQA--------------------------IFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWY 144 (315)
T ss_dssp ECCCEEECCCTTSSSCGGG--------------------------EEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEE
T ss_pred EEEEEEeCCCCCccccccc--------------------------ccceEEecCCCeEEEEecccccccCCCCCCEEEEE
Confidence 555554432 221111111 012367789999999998 78899999999
Q ss_pred ECCccCCCC------CCCeEEeccCCCCCCeEEEEEEE-cCCCCce---EEEEEEEecc--cCCCeeecCCce-eEEecC
Q psy3045 170 KDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIR-NEQESAQ---ASGELKLGGR--FDPPVIKESFSD-ETLNPG 236 (267)
Q Consensus 170 ~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~~---~~~~l~v~~~--~~~p~~~~~~~~-~~~~~g 236 (267)
+++..+... ....|.|.++..+|+|.|+|.|. +..+... ....+.+... ..+|.+...+.. ..+.+|
T Consensus 145 k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g 224 (315)
T 1itb_B 145 KDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLG 224 (315)
T ss_dssp ETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSS
T ss_pred ECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCC
Confidence 999888542 34689999999999999999999 6776652 2333323211 256777666554 478899
Q ss_pred CcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 237 PNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 237 ~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+.|.|.+.|.|.|.+.|+++|..+..++
T Consensus 225 ~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~ 254 (315)
T 1itb_B 225 SQIQLICNVTGQLSDIAYWKWNGSVIDEDD 254 (315)
T ss_dssp SCEEEEEEEEECTTSEEEEEETTEECCTTC
T ss_pred CcEEEEEEEecCCCCeeEEEECCEECCccc
Confidence 999999999999999999999999987643
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=3.4e-28 Score=202.99 Aligned_cols=233 Identities=14% Similarity=0.207 Sum_probs=155.5
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
.++.|.+|++++|.|.+.+ +.|++++........+....+ ...+|.|.+++.+|+|.|+|.+.+..+.....
T Consensus 56 ~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r---~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~ 132 (527)
T 3qs9_E 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNR---GVVSMVILKMTETQAGEYLLFIQSEATNYTIL 132 (527)
T ss_dssp CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC--------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEE
T ss_pred eeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcc---eEEEEEECcCChhhCeeEEEEEEeccccEEEE
Confidence 4789999999999999977 889986332111111111111 12369999999999999999999988766555
Q ss_pred EEEEEEeccccccCC-ceEEEeCCCceEEEEEeecCCCcc----------------------------------------
Q psy3045 98 TVLTVTAPLAAGVEP-TVQTIDFGRPAQFTCKYEISPPLA---------------------------------------- 136 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~-~~~~~~~~~~~~~~c~~~~~~~~~---------------------------------------- 136 (267)
+.+.|.. .....+ .......+....|.|.+.+.|++.
T Consensus 133 ~~v~v~~--~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A 210 (527)
T 3qs9_E 133 FTVSIRN--TLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCA 210 (527)
T ss_dssp EEEEEC-------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEE
T ss_pred EEEEECC--ceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEE
Confidence 5555431 111000 011112233333444333221110
Q ss_pred -------------------cccCCceEEEecCCCEEEEeEeC-CCCCceEEEEECCccCCCCC---------------CC
Q psy3045 137 -------------------AGVEPTVQTIDFGRPAQFTCKYE-GNPVKTISWMKDGKPVPDHN---------------EP 181 (267)
Q Consensus 137 -------------------~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~~~~~~---------------~~ 181 (267)
....+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ..
T Consensus 211 ~N~~G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~ 290 (527)
T 3qs9_E 211 RNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRIL 290 (527)
T ss_dssp ECSSCEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEE
T ss_pred EeCCCcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEE
Confidence 00144566788999999999996 88999999999998775421 23
Q ss_pred eEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCC--ceeEEecCCcEEEEEEeecCCCCcEEEEECC
Q psy3045 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESF--SDETLNPGPNYYFKCIASGNPTPEISWYLDG 259 (267)
Q Consensus 182 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~ 259 (267)
.|.|.++..+|+|.|+|.|.|. ...+..|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.|.|.|+|+|
T Consensus 291 ~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~---~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g 364 (527)
T 3qs9_E 291 FAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV---EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364 (527)
T ss_dssp EEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC-----CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETT
T ss_pred EEEEccCCcccCeEEEEEEEeC---CCceEEEEEE---ccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECC
Confidence 5999999999999999999997 4556666665 455554433 3456788999999999999999999999999
Q ss_pred EEcCCCC
Q psy3045 260 KKLVNAE 266 (267)
Q Consensus 260 ~~l~~~~ 266 (267)
+.|..+.
T Consensus 365 ~~l~~~~ 371 (527)
T 3qs9_E 365 KSFPCEQ 371 (527)
T ss_dssp EEEECBC
T ss_pred EECcCCc
Confidence 9986543
No 24
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=9.7e-29 Score=188.98 Aligned_cols=204 Identities=19% Similarity=0.269 Sum_probs=156.9
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
.|.|...| ....+.+|+++.|.|.+.+ +.|++++.... ..+..|.|.+++.+|+|.|+|.
T Consensus 1 kP~i~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~------------~~~~~l~i~~~~~~d~G~Y~C~ 66 (262)
T 3rjd_A 1 KAVITLQP--PWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQ------------TSTPSYRITSASVNDSGEYRCQ 66 (262)
T ss_dssp CCEEEESS--CCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECS------------CCSSEEEESSCCGGGCEEEEEE
T ss_pred CCeEecCC--CcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEee------------ccCCeEEEecCCcccCeEEEEE
Confidence 37777777 6788999999999999977 99999532111 1245799999999999999999
Q ss_pred EEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-CCCCCce
Q psy3045 87 VNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY-EGNPVKT 165 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~ 165 (267)
+.+..+.. .+.|.|...+... . +....+.+|+.+.|.|.+ .+.|.+.
T Consensus 67 ~~~~~~s~--~~~l~v~~~~~~~-~-----------------------------~~~~~~~~g~~v~l~C~~~~~~p~~~ 114 (262)
T 3rjd_A 67 RGLSGRSD--PIQLEIHRGWLLL-Q-----------------------------VSSRVFTEGEPLALRCHAWKDKLVYN 114 (262)
T ss_dssp ESSSCCCC--CEEEEEECSSEEE-E-----------------------------ESCSEEETTSCEEEEEEEGGGCCCEE
T ss_pred EecCCccc--cEEEEEeccceEe-c-----------------------------CCCeEEecCCeEEEEEEccCCCCCce
Confidence 98765543 4455555422100 0 112267789999999999 6778889
Q ss_pred EEEEECCccCCCC-CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEE
Q psy3045 166 ISWMKDGKPVPDH-NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCI 244 (267)
Q Consensus 166 ~~W~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 244 (267)
+.|++++..+... ....|.|..+..+|.|.|+|.+.|..+.......+.+.....+|.+...+ ...+.+|+.+.|.|.
T Consensus 115 v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~ 193 (262)
T 3rjd_A 115 VLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCE 193 (262)
T ss_dssp EEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEE
T ss_pred EEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeE
Confidence 9999999887543 36789999999999999999999988766666777777655577777666 456889999999999
Q ss_pred eecCCC-C----cEEEEECCEEcC
Q psy3045 245 ASGNPT-P----EISWYLDGKKLV 263 (267)
Q Consensus 245 ~~~~p~-~----~i~W~~~~~~l~ 263 (267)
+.+.|. | .+.|+++|..+.
T Consensus 194 ~~~~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 194 TKLLLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp CCCCCC-----EEEEEEETTEEEE
T ss_pred cccCCCCCCccEEEEEEeCCcEec
Confidence 999886 4 388999998875
No 25
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=6.8e-30 Score=202.27 Aligned_cols=229 Identities=22% Similarity=0.391 Sum_probs=101.6
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEE
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV 96 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (267)
.+..+.+|+++.|.|.+.+ +.|++++.. +....++...++.|.|.+++.+|+|.|+|.+.+. +....
T Consensus 16 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~ 88 (334)
T 1ry7_B 16 EQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTG------LVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEecCCcEEEEeeCCCCCCCcceEEEECCee------CCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEE
Confidence 7889999999999999986 999996432 2223445556678999999999999999999998 66667
Q ss_pred EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccc---cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCc
Q psy3045 97 ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAG---VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK 173 (267)
Q Consensus 97 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~---~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~ 173 (267)
.+.|.|...+.......... ..... .....+|.... .......+..|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~--~~~~~----~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~ 162 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGED--EAEDT----GVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGR 162 (334)
T ss_dssp ------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTB
T ss_pred EEEEEEeccCcccccccccc--ccccc----cccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCE
Confidence 77777765432211000000 00000 00011111111 12234578889999999999999999999999998
Q ss_pred cCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEeccc-CCCeeec-CCceeEEecCCcEEE
Q psy3045 174 PVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF-DPPVIKE-SFSDETLNPGPNYYF 241 (267)
Q Consensus 174 ~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~-~~p~~~~-~~~~~~~~~g~~~~l 241 (267)
.+... ....|.|.++..+|+|.|+|.+.|..+.......+.|.... .+|.+.. .+....+.+|+.+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l 242 (334)
T 1ry7_B 163 EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEF 242 (334)
T ss_dssp CCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEE
T ss_pred ECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEE
Confidence 77532 24589999999999999999999998877777777776422 2344443 345678899999999
Q ss_pred EEEeecCCCCcEEEEE----CCEEcCC
Q psy3045 242 KCIASGNPTPEISWYL----DGKKLVN 264 (267)
Q Consensus 242 ~C~~~~~p~~~i~W~~----~~~~l~~ 264 (267)
.|.+.|.|.|.+.|++ ||..+..
T Consensus 243 ~C~~~g~p~p~v~W~~~~~~~g~~~~~ 269 (334)
T 1ry7_B 243 HCKVYSDAQPHIQWLKHVEVNGSKVGP 269 (334)
T ss_dssp CCCCBCSSCEEEEEEECCCGGGCSBCT
T ss_pred EEEEecCCCCeEEEEECCcCCCccccC
Confidence 9999999999999999 6766643
No 26
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=3.8e-27 Score=201.97 Aligned_cols=233 Identities=21% Similarity=0.373 Sum_probs=175.4
Q ss_pred eEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEE--EEeeEEEEeecccCCCeeEEEEEEcCCCc-cEE
Q psy3045 24 RFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVK--QVSGTLIIKEAKVEDSGKYLCVVNNSVGG-ESV 96 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~ 96 (267)
...+..|+++.|.|.+.+ +.|++++... ....++. ..+..|.|.++..+|+|.|+|.+.|..|. .+.
T Consensus 298 ~~~~~~g~~v~l~C~~~~~p~~v~W~~~g~~l------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~ 371 (642)
T 1e07_A 298 SNPVEDEDAVALTCEPEIQNTTYLWWVNNQSL------PVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSD 371 (642)
T ss_pred ceeEecCCcEEEEEECCCCCccEEEEECCccC------CCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCccee
Confidence 456667889999999988 9999964322 2223332 24568999999999999999999999886 456
Q ss_pred EEEEEEEeccc-cccCCceEEEeCCCceEEEEEeecCCCcc---------------------------------------
Q psy3045 97 ETVLTVTAPLA-AGVEPTVQTIDFGRPAQFTCKYEISPPLA--------------------------------------- 136 (267)
Q Consensus 97 ~~~l~V~~~~~-~~~~~~~~~~~~~~~~~~~c~~~~~~~~~--------------------------------------- 136 (267)
.+.|.|...+. +...+.......|..+.|.|.+...|++.
T Consensus 372 ~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 451 (642)
T 1e07_A 372 PVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASG 451 (642)
T ss_pred eEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCC
Confidence 67788876543 23444455667888888888875432211
Q ss_pred ------------------cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-------CCCeEEeccCCCC
Q psy3045 137 ------------------AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKE 191 (267)
Q Consensus 137 ------------------~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~ 191 (267)
.........+.+|+.+.|.|.+. .|.+.+.|++++..+... ....|.|.++..+
T Consensus 452 ~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-~~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~ 530 (642)
T 1e07_A 452 HSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE-AQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRN 530 (642)
T ss_pred CcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC-CCCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChh
Confidence 00111233566899999999998 478899999999887643 2468999999999
Q ss_pred CCeEEEEEEEcCCCCceE-EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 192 DKGMYQCVIRNEQESAQA-SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 192 d~g~y~C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
|+|.|+|.|.|..|.... .+.|.|.. .|+.+...+.+..+.+|+.+.|.|.+.|.|+|.+.|++||..|..+
T Consensus 531 d~G~Y~C~a~n~~g~~~s~~~~l~V~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~ 603 (642)
T 1e07_A 531 DARAYVCGIQNSVSANRSDPVTLDVLY--GPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT 603 (642)
T ss_pred cCceEEEEeEcCCCCccCCCEEEEEEe--CCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC
Confidence 999999999999886543 46666653 4555666667778999999999999999999999999999988653
No 27
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=191.40 Aligned_cols=215 Identities=19% Similarity=0.201 Sum_probs=156.9
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
..+|.|...+ ..+.+.+|+++.|.|.+.+ +.|+++...... .. .....+.|.|.+++..|+|.|+|.+.+
T Consensus 2 ~~~P~i~~~~--~~~~v~~G~~v~L~C~~~~~v~W~~~~~~~~~---~~----~~~~~~~L~i~~~~~~d~G~Y~C~~~n 72 (292)
T 4dkd_C 2 GSIPVIEPSV--PELVVKPGATVTLRCVGNGSVEWDGPPSPHWT---LY----SDGSSSILSTNNATFQNTGTYRCTEPG 72 (292)
T ss_dssp --CCEEESCC--SSCEECTTCCEEEEEECSSCCCBCCCCCSSCE---EC----CBTTEEEEEESSCCGGGCSCEEECCCC
T ss_pred CCCceecCCC--CeEEEcCCCcEEEEEcCCCceEEccCCCCceE---Ee----ccCceEEEEEcccccccCEEEEEEEcc
Confidence 4689998887 7889999999999999999 999974221100 00 011245899999999999999999999
Q ss_pred CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC--ceEE
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV--KTIS 167 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~~ 167 (267)
..+..+..+.|.|..++.... ..+....+.+|+.+.|.|.+.+ |. +.+.
T Consensus 73 ~~~~~~~~~~l~V~~~~~~~~----------------------------~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~ 123 (292)
T 4dkd_C 73 DPLGGSAAIHLYVKDPARPWN----------------------------VLAQEVVVFEDQDALLPCLLTD-PVLEAGVS 123 (292)
T ss_dssp ----CCEEECCEECCSSCCEE----------------------------ESCSEEEEETTSCEECCEEESS-GGGGSSEE
T ss_pred CCCCcceEEEEEEcCcccccc----------------------------ccCCeEEEcCCCcEEEeeeCCC-CCcceeEE
Confidence 887777778888776443211 1122337888999999999987 43 7899
Q ss_pred EEEC-CccCCCC------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEEeccc-CCCeeecCCceeEEecCCc
Q psy3045 168 WMKD-GKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRF-DPPVIKESFSDETLNPGPN 238 (267)
Q Consensus 168 W~~~-~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v~~~~-~~p~~~~~~~~~~~~~g~~ 238 (267)
|+++ +..+... ....|.|.++..+|+|.|+|.+.+..+.... .+.+.|.... .+|.+...+....+.+|+.
T Consensus 124 W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~ 203 (292)
T 4dkd_C 124 LVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEA 203 (292)
T ss_dssp EEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSC
T ss_pred EEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCC
Confidence 9997 4444332 2345999999999999999999987665433 5666665322 2788888777777789999
Q ss_pred EEEEEEeecCCCC-cEEEEECCEEcC
Q psy3045 239 YYFKCIASGNPTP-EISWYLDGKKLV 263 (267)
Q Consensus 239 ~~l~C~~~~~p~~-~i~W~~~~~~l~ 263 (267)
+.|.|.+.+.|++ .+.|+++|..+.
T Consensus 204 v~l~C~~~~~~~~~~~~w~~~~~~~~ 229 (292)
T 4dkd_C 204 AQIVCSASSVDVNFDVFLQHNNTKLA 229 (292)
T ss_dssp EEEEEEEEESSSCCEEECCBSSCCCC
T ss_pred EEEEEEecCCCCceEEEEeCCCcccc
Confidence 9999999987764 789999987664
No 28
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=4.8e-28 Score=202.12 Aligned_cols=199 Identities=17% Similarity=0.182 Sum_probs=143.7
Q ss_pred eeEEecCCCeEEEEEEec-c-----eeeeecccCcceeccc----cCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCC
Q psy3045 23 IRFKKPGGESFALLCEAQ-E-----NMWFKFIEGSSRKVAV----PLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVG 92 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~-~-----~~W~~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 92 (267)
....+.+|+++.|.|.+. + +.|++++......... ....+......+|.|.+++.+|+|.|+|.|.|.
T Consensus 235 ~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~-- 312 (527)
T 3qs9_E 235 PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-- 312 (527)
T ss_dssp CEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE--
T ss_pred CceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC--
Confidence 578899999999999996 5 9999974422111100 011222334567999999999999999999887
Q ss_pred ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECC
Q psy3045 93 GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG 172 (267)
Q Consensus 93 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~ 172 (267)
....+.|.|...+.+...+.. ....+.+|+.+.|.|.+.+.|.|.+.|+++|
T Consensus 313 -~~~~~~L~V~~~p~i~~~~~~---------------------------~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g 364 (527)
T 3qs9_E 313 -PSQSALVTIVEKGFINATNSS---------------------------EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364 (527)
T ss_dssp -EEEEEEEEEC--CEEECCCSC---------------------------CEECCCTTCCCCEEEEEEEESCCEEEEEETT
T ss_pred -CCceEEEEEEccCccccccCc---------------------------ccEEEcCCCeEEEEEEEEecCCCEEEEEECC
Confidence 566677777654432222211 1225778999999999999999999999999
Q ss_pred ccCCCC-----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec
Q psy3045 173 KPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG 247 (267)
Q Consensus 173 ~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 247 (267)
..+... ....|.|.++..+|+|.|+|.|.|..+....++.|.|. .+|.+...+. ...|.|.+.|
T Consensus 365 ~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~---~~P~i~~~~~--------~~~l~C~a~g 433 (527)
T 3qs9_E 365 KSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR---RKPQVLAEAS--------ASQASCFSDG 433 (527)
T ss_dssp EEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----CCCEEEECCC--------CE---EEEEC
T ss_pred EECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe---cCCeEEEeCC--------CCEEEEEEEE
Confidence 887543 25689999999999999999999999888777777775 5777765442 2357999999
Q ss_pred CCCCcEEEEECCEEc
Q psy3045 248 NPTPEISWYLDGKKL 262 (267)
Q Consensus 248 ~p~~~i~W~~~~~~l 262 (267)
.|.|.|.|++++...
T Consensus 434 ~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 434 YPLPSWTWKKCSDKS 448 (527)
T ss_dssp SSCCEEEEECCC---
T ss_pred EcCCeEEEEECCCCc
Confidence 999999999876543
No 29
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=6.1e-28 Score=212.16 Aligned_cols=239 Identities=22% Similarity=0.297 Sum_probs=181.5
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE---------EeeEEEEeeccc
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ---------VSGTLIIKEAKV 77 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~---------~~~~l~i~~~~~ 77 (267)
.+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ...++.. ....|.|.++..
T Consensus 428 ~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~------~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 499 (816)
T 3dmk_A 428 DPPVIRQAF--QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIA------NNDRYQVGQYVTVNGDVVSYLNITSVHA 499 (816)
T ss_dssp CCCEEEEEC--CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECC------SCTTEEEEEEECTTSCEEEEEEESSCCT
T ss_pred CCCceEecC--cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECC------CCCCcccccEEecCCCcEEEEEEeeccc
Confidence 467777665 5678999999999999987 99999633211 1112111 224699999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCc----------------------
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPL---------------------- 135 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~---------------------- 135 (267)
.|+|.|+|.+.|..|.......|.|...+.... ........|+.+.|.|.+...+..
T Consensus 500 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~ 578 (816)
T 3dmk_A 500 NDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ-MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPN 578 (816)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEECSSCEECC-CCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTT
T ss_pred cCCEEEEEEEEECCCeEEEEEEEEEecCCeeEc-cCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecC
Confidence 999999999999999888888888887654332 233445677888888866532110
Q ss_pred ------------------------------------------ccccCCceEEEecCCCEEEEeEeCCCC-CceEEEEECC
Q psy3045 136 ------------------------------------------AAGVEPTVQTIDFGRPAQFTCKYEGNP-VKTISWMKDG 172 (267)
Q Consensus 136 ------------------------------------------~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~~~ 172 (267)
..........+..|+.+.|.|.+.+.+ ++.+.|+++|
T Consensus 579 ~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g 658 (816)
T 3dmk_A 579 GTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDG 658 (816)
T ss_dssp SEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETT
T ss_pred CeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECC
Confidence 011111233467799999999998765 4599999999
Q ss_pred ccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEE
Q psy3045 173 KPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFK 242 (267)
Q Consensus 173 ~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~ 242 (267)
..+... ....|.|..+..+|+|.|+|.|.|..|....+..+.|. .+|.+...+.+..+.+|+.+.|.
T Consensus 659 ~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~---~~P~~~~~~~~~~v~~G~~v~l~ 735 (816)
T 3dmk_A 659 QAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY---VPPRWILEPTDKAFAQGSDAKVE 735 (816)
T ss_dssp BCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEE---EEEEEEECCCCEEEETTCCEEEE
T ss_pred eEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEE---eCCceeeecccceecCCCcEEEE
Confidence 887532 24679999999999999999999999988888887776 57888888888889999999999
Q ss_pred EEeecCCCCcEEEEECCEEc
Q psy3045 243 CIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 243 C~~~~~p~~~i~W~~~~~~l 262 (267)
|.+.|.|.|.|.|++++..+
T Consensus 736 C~~~g~P~p~i~W~k~~~~~ 755 (816)
T 3dmk_A 736 CKADGFPKPQVTWKKAVGDT 755 (816)
T ss_dssp CEEEEESCCEEECCEECSSS
T ss_pred EEEecCCCCeEEEEecCCCC
Confidence 99999999999999987543
No 30
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=3.2e-27 Score=186.57 Aligned_cols=201 Identities=18% Similarity=0.213 Sum_probs=147.0
Q ss_pred eeEEecCCCeEEEEEEecc--------------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCe-eEEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE--------------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSG-KYLCVV 87 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~ 87 (267)
..+.+.+|+++.|.|.+.+ +.|++++..... ..+. ..+++|.|.+++.+|+| .|+|.+
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~------~~~~-~~~~~L~i~~v~~~D~Gs~Y~C~a 109 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP------LNRR-VKNGDLWIANYTSNDSHRRYLCTV 109 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE------CSTT-EETTEEEESSCCGGGGGCCEEEEE
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccc------cCce-eecceEEEcCCChHhCCCcEEEEE
Confidence 5778999999999999643 899997443221 1122 34678999999999999 999999
Q ss_pred EcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC-CceE
Q psy3045 88 NNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP-VKTI 166 (267)
Q Consensus 88 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~ 166 (267)
.|..|.......+.+...+.....+ . ....+.+|+.+.|.|.+.+.| .+.+
T Consensus 110 ~n~~g~~~~~~~~~v~~~~p~~~~~-~---------------------------~~~~~~~G~~v~L~C~~~g~p~~~~i 161 (329)
T 3oq3_B 110 TTKNGDCVQGIVRSHIRKPPSCIPE-T---------------------------YELGTHDKYGIDLYCGILYAKHYNNI 161 (329)
T ss_dssp ECTTSCEEEEEEEEEECCCCSCEEE-E---------------------------EETTSSTTTCEEEECCCCSCCCCCEE
T ss_pred EeCCCceeeEEEEEEEcCCCcEecc-c---------------------------cceEEeCCCcEEEEeccCCCCCCceE
Confidence 9988764443333333322111000 0 011345699999999999999 8999
Q ss_pred EEEECCccCCCC------CCCeEEeccCCCCCCeEEEEEEEcC--CCCceEE----EEEEEecccCC----CeeecCCce
Q psy3045 167 SWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNE--QESAQAS----GELKLGGRFDP----PVIKESFSD 230 (267)
Q Consensus 167 ~W~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~--~~~~~~~----~~l~v~~~~~~----p~~~~~~~~ 230 (267)
.|++++..+... .+..|.|.++..+|+|.|+|.|.|. .+..... ..+.|.. .+ |.+ .+..
T Consensus 162 ~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~--~~~~~~~~~--~~~~ 237 (329)
T 3oq3_B 162 TWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIP--SQDHRFKLI--LDPK 237 (329)
T ss_dssp EEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEEC--CCCCCEEEE--CCSE
T ss_pred EEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEEC--CCCCCCcee--cCCe
Confidence 999999887522 2478999999999999999999987 5444333 4555543 22 233 5666
Q ss_pred eEEecCCcEEEEEEeecCC---CC-cEEEEECCEEc
Q psy3045 231 ETLNPGPNYYFKCIASGNP---TP-EISWYLDGKKL 262 (267)
Q Consensus 231 ~~~~~g~~~~l~C~~~~~p---~~-~i~W~~~~~~l 262 (267)
..+.+|+.+.|.|.+.|.| ++ .+.|+++|..+
T Consensus 238 ~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 238 INVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred eEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 7889999999999999998 67 89999999875
No 31
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=8.4e-27 Score=189.03 Aligned_cols=219 Identities=21% Similarity=0.347 Sum_probs=157.7
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEE-EEeeEEEEeec-----ccCC
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVK-QVSGTLIIKEA-----KVED 79 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~-----~~~d 79 (267)
....|...| .+..+.+|++++|.|.+.+ +.|++++.... .....+.. ..+++|.|.++ +.+|
T Consensus 20 ~~~~~~~~P--~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~----~~~~~~~~~~~~~~l~i~~~~~~~~~~~D 93 (403)
T 3laf_A 20 RSLHFVSEP--SDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILA----LGMDDRKQQLPNGSLLIQNILHSRHHKPD 93 (403)
T ss_dssp CSSEEEECC--CCEEECTTCCEEECCEEECTTCCCEEEEEETTEECC----TTSCTTEEECTTSCEEECSCCCBTTBCSS
T ss_pred eeEEEEeCC--CceEEecCCcEEEEEEcCCCCCCceEEEEECCEECc----cCCcccEEEecCCcEEEeeeeccCCCCCc
Confidence 345666666 7899999999999999976 99999633211 11122222 23456777777 6779
Q ss_pred CeeEEEEEEcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 80 SGKYLCVVNNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
+|.|+|.+.+..+.. +..+.+.|..++..... +....+.+|+.+.|.|.
T Consensus 94 ~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~-----------------------------~~~~~~~~G~~v~l~C~ 144 (403)
T 3laf_A 94 EGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQ-----------------------------TESITAFMGDTVLLKCE 144 (403)
T ss_dssp CEEEEEEEECGGGCEEECCCEEEEECCCCEECSC-----------------------------CCCEEEETTSCEEECCC
T ss_pred ceEEEEEEEeCCCccEEEEEEEEEecCCCccccC-----------------------------CCcEEEEcCCeEEEEEE
Confidence 999999999654433 33445555443332222 22337888999999999
Q ss_pred eCCCCCceEEEEECCccCCC---------CCCCeEEeccCCCCCCeEEEEEEEcCCCCce-EEEEEEEecccCC---Cee
Q psy3045 158 YEGNPVKTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKLGGRFDP---PVI 224 (267)
Q Consensus 158 ~~~~p~~~~~W~~~~~~~~~---------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~v~~~~~~---p~~ 224 (267)
+.+.|.+.+.|++++..+.. .....|.|.++..+|+|.|+|.+.|..+... ....+.+...... +.+
T Consensus 145 ~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~ 224 (403)
T 3laf_A 145 VIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYF 224 (403)
T ss_dssp EECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEE
T ss_pred EcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceE
Confidence 99999899999999987742 1346899999999999999999999876533 3455555432111 234
Q ss_pred ecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 225 KESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 225 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+...
T Consensus 225 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~ 265 (403)
T 3laf_A 225 LQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLR 265 (403)
T ss_dssp EECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCS
T ss_pred ecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCC
Confidence 44566677889999999999999999999999999988653
No 32
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=184.73 Aligned_cols=213 Identities=15% Similarity=0.227 Sum_probs=140.0
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCC
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVG 92 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 92 (267)
|.|.... ..+.+.+|+++.|.|.+.+ +.|++++............. ...+.|.|.+++.+|+|.|+|.+.|..|
T Consensus 1 P~i~~~~--~~~~v~~G~~v~L~C~~~~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 1 LVVTPPG--PELVLNVSSTFVLTCSGSAPVVWERMSQEPPQEMAKAQDG---TFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CCBCSSC--SEEECCTTCCEEEEEEESSCCEEEBTTBCCSEEEEECTTS---CEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred CeecCCC--CeEEEeCCCcEEEEEeccceEEEECCCCCcccceeccCCC---ceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 4555555 6889999999999999999 99999744321111100010 1246899999999999999999998876
Q ss_pred c---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEE
Q psy3045 93 G---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWM 169 (267)
Q Consensus 93 ~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~ 169 (267)
. ....+.+.|..+......... ......+.+|+.+.|.|.+. .|.+.+.|+
T Consensus 76 ~~~~~~~~~~v~v~~p~~~~~~~~~-------------------------~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~ 129 (289)
T 3mjg_X 76 LETDERKRLYIFVPDPTVGFLPNDA-------------------------EELFIFLTEITEITIPCRVT-DPQLVVTLH 129 (289)
T ss_dssp ---CCCEEEEEECCCTTCCBCCCCH-------------------------HHHEEEESSCCCEEECCCBS-CTTSCEEEE
T ss_pred CCcCcEEeEEEEEECCCcCcccCCC-------------------------CcceEEeecCCeEEEEeEcC-CCCceEEEE
Confidence 5 233444444322111111000 00013688899999999998 677889999
Q ss_pred ECC--ccCCCC--CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEEecccCCCeeecCCceeEEecCCcEEEEEE
Q psy3045 170 KDG--KPVPDH--NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCI 244 (267)
Q Consensus 170 ~~~--~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 244 (267)
+++ ..+... ....+. ...|+|.|+|.|.+..+.... ...+.+... .+|.+...+....+.+|+.+.|.|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p~i~~~~~~~~v~~G~~v~L~C~ 204 (289)
T 3mjg_X 130 EKKGDVALPVPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV-SSINVSVNAVQTVVRQGENITLMCI 204 (289)
T ss_dssp ESSCCSCCCCCEETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-CCCCCEEEESCSEEETTSCEEEEEE
T ss_pred eCCCCCccceeecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-CCCCcEEeCCcceeEcCCCEEEEEE
Confidence 864 333211 112222 357899999999976644333 344555432 4666666666678999999999999
Q ss_pred eecCCCCcEEEEECCEEc
Q psy3045 245 ASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 245 ~~~~p~~~i~W~~~~~~l 262 (267)
+.|.|.|.+.|+++++.+
T Consensus 205 ~~g~p~p~v~W~~~~~~~ 222 (289)
T 3mjg_X 205 VIGNEVVNFEWTYPRKES 222 (289)
T ss_dssp EESCSSBEEEEECTTSSS
T ss_pred ECCCCCcceEEEcCCccC
Confidence 999999999999877643
No 33
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=6.3e-27 Score=196.03 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=149.4
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceecc--------ccCCceEEE----EeeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVA--------VPLNDRVKQ----VSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~--------~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+.+|+++.|.|.+.+ +.|++++.+...... .....|+.. ...+|.|.+++.+|+|.|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (523)
T 2rcj_C 8 PSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYC 87 (523)
T ss_pred CceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 5789999999999999986 999997433221110 112344442 23589999999999999999
Q ss_pred EEEcCCCcc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 86 VVNNSVGGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 86 ~~~~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
.+.+..|.. ...+.|.|...+. ..+... ..+....+.+|+.+.|.|.+.+.|
T Consensus 88 ~a~n~~g~~~~~~~~~~l~V~~~~~--~~P~~~-----------------------~~~~~~~~~~g~~v~l~C~~~g~~ 142 (523)
T 2rcj_C 88 ASWNSSDNSYVFGTGTKVTVLGQPK--ANPTVT-----------------------LFPPSSEELQANKATLVCLISDFY 142 (523)
T ss_pred EEccCCCccccccCceEEEeccCCC--cCCeEE-----------------------ecCCcccccCCCceEEEEEecccc
Confidence 999876532 2345666643211 011110 111222455799999999999886
Q ss_pred Cc--eEEEEECCccCCCCC---------C------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe-cccCCCee
Q psy3045 163 VK--TISWMKDGKPVPDHN---------E------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG-GRFDPPVI 224 (267)
Q Consensus 163 ~~--~~~W~~~~~~~~~~~---------~------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~-~~~~~p~~ 224 (267)
++ .+.|+++|..+..+. . +.|.|..+..+|+|.|+|.|.|..+....+..+.+. ....+|.+
T Consensus 143 p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v 222 (523)
T 2rcj_C 143 PGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSV 222 (523)
T ss_pred CCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEE
Confidence 54 999999998875321 1 258999999999999999999988766555543221 12345666
Q ss_pred ecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcC
Q psy3045 225 KESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 263 (267)
Q Consensus 225 ~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~ 263 (267)
........+.+|+.+.|.|.+.|. |.| .|.|+++|..+.
T Consensus 223 ~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~ 263 (523)
T 2rcj_C 223 FPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSG 263 (523)
T ss_pred EecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccc
Confidence 544434456889999999999986 777 899999997653
No 34
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=5.7e-28 Score=190.72 Aligned_cols=217 Identities=18% Similarity=0.277 Sum_probs=147.3
Q ss_pred cccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccc---cCCceEE---------EEeeEEEEeecc
Q psy3045 15 TFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAV---PLNDRVK---------QVSGTLIIKEAK 76 (267)
Q Consensus 15 ~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~---~~~~~~~---------~~~~~l~i~~~~ 76 (267)
.|...+ ..+.+.+|+++.|.|.+.+ +.|++++......... ....|+. ....+|.|.+++
T Consensus 5 ~v~~~p--~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 5 QVIQPD--KSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CEECCC--SEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred EEEcCC--CceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 455555 7899999999999999986 9999964321110000 0112333 334579999999
Q ss_pred cCCCeeEEEEEEcCCCccE-----EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 77 VEDSGKYLCVVNNSVGGES-----VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
.+|+|.|+|.+.+..+... ..+.|.|...+... ... .....+.+|+.
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p---~i~-------------------------~~~~~~~~g~~ 134 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAP---VVS-------------------------GPAARATPQHT 134 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCC---EEE-------------------------CCSSCBCTTCE
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCc---eee-------------------------ccccccCCCCE
Confidence 9999999999998765421 23466666543211 000 01125678999
Q ss_pred EEEEeEeCCCCCc--eEEEEECCccCCCCC--------------CCeEEeccCCCCCCeEEEEEEEcCCCCc---eEEEE
Q psy3045 152 AQFTCKYEGNPVK--TISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESA---QASGE 212 (267)
Q Consensus 152 v~l~C~~~~~p~~--~~~W~~~~~~~~~~~--------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~---~~~~~ 212 (267)
+.|.|.+.+.|++ .+.|++++..+.... .+.|.|.....+|.|.|+|.|.|..+.. ..+..
T Consensus 135 ~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~ 214 (327)
T 2wng_A 135 VSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTAN 214 (327)
T ss_dssp EEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEE
T ss_pred EEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEE
Confidence 9999999988755 999999998876321 1245666666667899999999987653 22333
Q ss_pred EEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 213 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 213 l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
+.+.. ..+|.+...+.. +.+|+.+.|.|.+.|.|++ .|.|++||+.+..
T Consensus 215 ~~~~v-~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 265 (327)
T 2wng_A 215 LSETI-RVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRT 265 (327)
T ss_dssp GGGTB-CBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEE
T ss_pred ecccc-CCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccC
Confidence 32222 356776665443 6789999999999996544 8999999998753
No 35
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=7e-27 Score=183.12 Aligned_cols=217 Identities=16% Similarity=0.190 Sum_probs=146.4
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCeeEEEEEEcCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGKYLCVVNNSVG 92 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~ 92 (267)
..+.+.+|+.+.|.|.... +.|++++.. +....++... ...|.|.+++.+|+|.|+|.+.|..|
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~------i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g 82 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVS------TEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDG 82 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEETTEE------CTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCC
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEE------CCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCC
Confidence 4678999999999998864 999996432 1222333322 26899999999999999999999887
Q ss_pred ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC-CCCCceEEEEEC
Q psy3045 93 GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE-GNPVKTISWMKD 171 (267)
Q Consensus 93 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~ 171 (267)
... ...+.|........... ...+|...........+.+|+.+.|.|.+. +.|.+.+.|+++
T Consensus 83 ~~~-s~~l~v~~~~~~~~~~~----------------~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~ 145 (312)
T 2y23_A 83 IAS-SYLIDEEELKRLLALSH----------------EHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN 145 (312)
T ss_dssp CCE-EEEECHHHHHHHHHHHH----------------HHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEET
T ss_pred cEE-EEEEEEeeeeeeecccc----------------cCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEEC
Confidence 543 44454432110000000 000000000001133788899999999998 789999999999
Q ss_pred CccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec------------------ccCCC
Q psy3045 172 GKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG------------------RFDPP 222 (267)
Q Consensus 172 ~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~------------------~~~~p 222 (267)
+..+.... ...|.|.++..+|+|.|+|.+.+... .....+.+.. ...+|
T Consensus 146 ~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 223 (312)
T 2y23_A 146 EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKA--TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGP 223 (312)
T ss_dssp TEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSC--EEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCc--eEEEEEEEcchhhhhhcccccccccchhhccCC
Confidence 98876532 12399999999999999999986543 3333333310 01235
Q ss_pred eeecCCceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcCCC
Q psy3045 223 VIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~~~ 265 (267)
.+.... ...+.+|+.+.|.|.+.+.|+| .+.|+++|+.+..+
T Consensus 224 ~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~ 266 (312)
T 2y23_A 224 HFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD 266 (312)
T ss_dssp EEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEE
T ss_pred ceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCC
Confidence 444322 3678899999999999999998 99999999988643
No 36
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=5.2e-27 Score=179.87 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=148.2
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc--------eeeeecccCcceeccccCCceEEEEeeEEEEeec---ccC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEA---KVE 78 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~ 78 (267)
++.+|.+.... .+.+|++++|.|.+.+ +.|++++... ...+...+..+.+..+ +..
T Consensus 3 P~~~p~~~~~~-----~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l--------~~~~~~~~~~~~~~~~~~~~~~ 69 (265)
T 2oz4_A 3 PATPPQLVSPR-----VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL--------NPTVTYGNDSFSAKASVSVTAE 69 (265)
T ss_dssp CSSCCEEECCS-----EEETTEEEEEEEEEESCSCGGGCEEEEEETTEEC--------CCEEEECSSEEEEEEEEEECGG
T ss_pred CCCCCccccCc-----eEecCCCEEEEEEccCCCCCcceEEEEEeCCEEC--------CceEeeCCCeEEEEeecccccc
Confidence 45677776543 7899999999999876 8999963321 1133333445555555 778
Q ss_pred CCee--EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 79 DSGK--YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 79 d~G~--Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
|+|. |+|.+.|..+.......|.|...+.+.... ....+.+|+.+.|.|
T Consensus 70 d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~-----------------------------~~~~v~~G~~v~l~C 120 (265)
T 2oz4_A 70 DEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL-----------------------------TKPEVSEGTEVTVKC 120 (265)
T ss_dssp GCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE-----------------------------SCSEEETTCEEEEEE
T ss_pred cCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeec-----------------------------CCceecCCCcEEEEE
Confidence 8875 999999998887788888887643311111 112577899999999
Q ss_pred EeCCCCCceEEEEECCccCCC-CCCCeEEeccCCCCCCeEEEEEEEcCC-CCce---EEEEEEEecccCCCeeecC--Cc
Q psy3045 157 KYEGNPVKTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQ-ESAQ---ASGELKLGGRFDPPVIKES--FS 229 (267)
Q Consensus 157 ~~~~~p~~~~~W~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~---~~~~l~v~~~~~~p~~~~~--~~ 229 (267)
.+. |.+.+.| +|..+.. +....|.+..+..+|.|.|+|.|.|.. |... ..+.+.|. .+|.+... +.
T Consensus 121 ~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~---~~p~~~~~~~p~ 193 (265)
T 2oz4_A 121 EAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL---YGPRLDERDCPG 193 (265)
T ss_dssp ECC--TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE---EEEECCGGGSCS
T ss_pred Ecc--CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEE---eCCccccccCCC
Confidence 988 8889999 8877743 244668888888999999999998644 5544 44556554 34444333 45
Q ss_pred eeEEecCCcEEEEEEeecCCCCcEEEEECCEE
Q psy3045 230 DETLNPGPNYYFKCIASGNPTPEISWYLDGKK 261 (267)
Q Consensus 230 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~ 261 (267)
...+.+|+.+.|.|.+.|+|.|.+.|+++|..
T Consensus 194 ~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~ 225 (265)
T 2oz4_A 194 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTF 225 (265)
T ss_dssp EEEEETTCEECCCCCCEEESCCEEEEEETTTE
T ss_pred ccEEcCCCeEEEEeECccCCCCeEEEEECCcc
Confidence 67889999999999999999999999999973
No 37
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=3.5e-27 Score=185.32 Aligned_cols=214 Identities=14% Similarity=0.204 Sum_probs=152.5
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
..+|.|...| . ..+.+|++++|.|.+.+ +.|+|++...... ......+..|.|.+++.+|+|.|+|.
T Consensus 22 ~~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~------~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (316)
T 3vh8_G 22 QDKPFLSAWP--S-AVVPRGGHVTLRCHYRHRFNNFMLYKEDRIHIPI------FHGRIFQESFNMSPVTTAHAGNYTCR 92 (316)
T ss_dssp --CCEEEEES--C-SEEETTSCEEEEEEBTTBCCSEEEEESSCSSSCH------HHHCCBSSCEEECSCCGGGCEEEEEE
T ss_pred CCCCEeeccC--C-CccCCCCCEEEEEEccCCCceEEEEeCCCcccee------ecCCcceEEEEECCCCcccCeEEEEE
Confidence 4478888777 3 57889999999999988 9999964332110 01112356899999999999999999
Q ss_pred EEcCCC-----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 87 VNNSVG-----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 87 ~~~~~~-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
+.+..+ ..+..+.|.|...+. .+... ..+.. .+.+|+.++|.|.+. .
T Consensus 93 a~~~~~~~~~~~~s~~~~l~V~~~~~---~p~~~-----------------------~~~~~-~v~~G~~v~L~C~~~-~ 144 (316)
T 3vh8_G 93 GSHPHSPTGWSAPSNPVVIMVTGNHR---KPSLL-----------------------AHPGP-LVKSGERVILQCWSD-I 144 (316)
T ss_dssp EBCSSSSSSBCCCCCCEEEEEECSSC---CCEEE-----------------------EESCS-EEETTCCEEEEEEES-S
T ss_pred EEcCCCCcceecCCCcEEEEEecCCC---CCeEE-----------------------ecCCC-ccCCCCeEEEEEcCC-C
Confidence 986432 234556666654221 01111 01111 477899999999995 4
Q ss_pred CCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCc-----eEEEEEEEecccCCCeeec
Q psy3045 162 PVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESA-----QASGELKLGGRFDPPVIKE 226 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~~~l~v~~~~~~p~~~~ 226 (267)
+.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+.. .....+.|.....+|.+..
T Consensus 145 ~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~ 224 (316)
T 3vh8_G 145 MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSA 224 (316)
T ss_dssp CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEE
T ss_pred CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEe
Confidence 56689999999877421 34679999999999999999999987642 3455666765556777776
Q ss_pred CCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 227 SFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
.+.. .+.+|+.+.|.|.+. .|.+.+.|+|+|..+.
T Consensus 225 ~~~~-~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 225 QPGP-KVQAGESVTLSCSSR-SSYDMYHLSREGGAHE 259 (316)
T ss_dssp ESCS-CCCTTSCCEEEEEES-SCCSEEEEEETTSSCC
T ss_pred CCCC-eecCCCcEEEEEECC-CCCcEEEEEECCCcCC
Confidence 6543 678999999999997 5778999999997654
No 38
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=8.5e-28 Score=188.61 Aligned_cols=212 Identities=21% Similarity=0.257 Sum_probs=146.3
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCccee-------ccccCCceEE---------EEeeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRK-------VAVPLNDRVK---------QVSGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~-------~~~~~~~~~~---------~~~~~l~i~~~~ 76 (267)
..+.+..|++|+|.|.+.+ +.|+|++...... .......+.. ..+.+|.|.+++
T Consensus 8 ~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 87 (313)
T 4fqp_A 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87 (313)
T ss_dssp SEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCC
T ss_pred CEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCC
Confidence 5788899999999999875 6799974432111 0111122222 134579999999
Q ss_pred cCCCeeEEEEEEcC-CCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNS-VGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+. .+.....+.|.+...|...... ....+..++.+.+.
T Consensus 88 ~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~-----------------------------~~~~~~~~~~~~~~ 138 (313)
T 4fqp_A 88 VEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEV-----------------------------QKVQLTGEPVPMAR 138 (313)
T ss_dssp GGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEE-----------------------------CCBCCCSSCEEEEE
T ss_pred hhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecc-----------------------------cceEeecCceEEEE
Confidence 99999999998644 3445555555554433211111 11144557778889
Q ss_pred eEeC-CCCCceEEEEECCccCCCC-------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCC
Q psy3045 156 CKYE-GNPVKTISWMKDGKPVPDH-------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 222 (267)
Q Consensus 156 C~~~-~~p~~~~~W~~~~~~~~~~-------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p 222 (267)
|.+. +.|.+.+.|++++..+... + .+.|.+.....+|.|.|+|.|.|..+.......+.+.+. .+|
T Consensus 139 C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P 217 (313)
T 4fqp_A 139 CVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY-YPP 217 (313)
T ss_dssp EEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-EEE
T ss_pred EEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc-cCC
Confidence 9865 6788999999998766421 1 135788888899999999999998877666555555443 456
Q ss_pred eeecCC-ceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcCC
Q psy3045 223 VIKESF-SDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 223 ~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~~ 264 (267)
.+...+ ....+.+|+.+.|.|.+.|+|.| .|.|+++|..+..
T Consensus 218 ~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~ 261 (313)
T 4fqp_A 218 EVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP 261 (313)
T ss_dssp EEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCT
T ss_pred ccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCC
Confidence 665433 34456678999999999999999 6999999988754
No 39
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=191.57 Aligned_cols=214 Identities=19% Similarity=0.248 Sum_probs=149.8
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceec-----------cccCCceEEE-----EeeEEEEeecccCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKV-----------AVPLNDRVKQ-----VSGTLIIKEAKVEDS 80 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~-----------~~~~~~~~~~-----~~~~l~i~~~~~~d~ 80 (267)
+.+++.+|++++|.|.+.+ +.|+|++....... ...+..|+.. .+.+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3568889999999999865 89999643322111 1112233332 235799999999999
Q ss_pred eeEEEEEEcCC-CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-
Q psy3045 81 GKYLCVVNNSV-GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY- 158 (267)
Q Consensus 81 G~Y~C~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~- 158 (267)
|.|+|.+.+.. +.......+.+...+..... ..+.......|+.+.|.|.+
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~C~~~ 139 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLI---------------------------KGPDSLIDGGNETVAAICIAA 139 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEE---------------------------ECSSCCCTTCSCEEEEEEEEE
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccc---------------------------cccceeEEcCCceEEEEEEec
Confidence 99999998764 44566666666553321110 00111134457889999985
Q ss_pred CCCCCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCC
Q psy3045 159 EGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESF 228 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~ 228 (267)
.+.|.+.+.|++++..+.... .+.|.|..+..+|.|.|+|.|.|..+.......+.+.+. .+|.+...+
T Consensus 140 ~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~~~~~~ 218 (308)
T 4fom_A 140 TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ-YAPEVSVTG 218 (308)
T ss_dssp EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC-EEEEECCBC
T ss_pred CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe-cCCeeEEcc
Confidence 578999999999998875321 246889999999999999999998877666555555443 355554433
Q ss_pred -ceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcCC
Q psy3045 229 -SDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 229 -~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~~ 264 (267)
....+..|+.+.|.|.+.|.|+| .+.|+|+|..+..
T Consensus 219 ~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~ 256 (308)
T 4fom_A 219 YDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPD 256 (308)
T ss_dssp CCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCS
T ss_pred cceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCC
Confidence 34456678999999999999998 7999999987654
No 40
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=2.4e-27 Score=187.35 Aligned_cols=220 Identities=22% Similarity=0.335 Sum_probs=152.8
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc---------eeeeecccCcce-----------eccccCCceEEE-----Ee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE---------NMWFKFIEGSSR-----------KVAVPLNDRVKQ-----VS 67 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~-----------~~~~~~~~~~~~-----~~ 67 (267)
++.+...+ ..+.+.+|+++.|.|.+.+ +.|++++++... .....+..|+.. .+
T Consensus 14 ~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 91 (331)
T 3u83_A 14 PSQVVQVN--DSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTD 91 (331)
T ss_dssp -------C--EEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSB
T ss_pred CcceEEcC--CcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCC
Confidence 34455554 7899999999999999754 899996432211 111123445443 24
Q ss_pred eEEEEeecccCCCeeEEEEEE-cCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEE
Q psy3045 68 GTLIIKEAKVEDSGKYLCVVN-NSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTI 146 (267)
Q Consensus 68 ~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 146 (267)
.+|.|.+++.+|+|.|+|.+. +..+.....+.|.|...+..... .......+
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~---------------------------~~~~~~~~ 144 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIE---------------------------GTQAVLRA 144 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE---------------------------ECSSCEEE
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceee---------------------------cCCCceee
Confidence 689999999999999999854 55566777788888765432111 01122356
Q ss_pred ecC---CCEEEEeE-eCCCCCceEEEEECCccCC------CCC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 147 DFG---RPAQFTCK-YEGNPVKTISWMKDGKPVP------DHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 147 ~~g---~~v~l~C~-~~~~p~~~~~W~~~~~~~~------~~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
.+| +.+.|.|. ..+.|.+.+.|++++.... ..+ ...|.|..+..+|.|.|+|.|.|..+....++
T Consensus 145 ~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 224 (331)
T 3u83_A 145 KKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESL 224 (331)
T ss_dssp CTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEE
T ss_pred cCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeE
Confidence 677 77999998 7788999999999633211 011 24577888899999999999999987766666
Q ss_pred EEEEecccCCCeeec-CCceeEEecCCcEEEEEEeecCCCCc-EEEEECCEEcCC
Q psy3045 212 ELKLGGRFDPPVIKE-SFSDETLNPGPNYYFKCIASGNPTPE-ISWYLDGKKLVN 264 (267)
Q Consensus 212 ~l~v~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~l~~ 264 (267)
.+.|. .+|.+.. ......+.+|+.+.|.|.+.|.|.|. +.|+++|..+..
T Consensus 225 ~l~V~---~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~ 276 (331)
T 3u83_A 225 TLNVQ---YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPK 276 (331)
T ss_dssp ECCEE---EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCT
T ss_pred EEEEe---cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccc
Confidence 66665 3455543 33444578899999999999999998 999999987754
No 41
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=194.24 Aligned_cols=223 Identities=16% Similarity=0.208 Sum_probs=150.0
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCcceeccc----cCCceEEEEeeEEEEeecccCCC
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAV----PLNDRVKQVSGTLIIKEAKVEDS 80 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~ 80 (267)
.+|.+...+ ....+.+|+++.|.|.+.+ +.|++++......... ....+.....+.|.|.++..+|+
T Consensus 113 ~~P~~~~~~--~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 190 (523)
T 2rcj_C 113 ANPTVTLFP--PSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSH 190 (523)
T ss_pred cCCeEEecC--CcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCC
Confidence 467666655 4556778999999999986 8999974432211110 01112222345799999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|.|+|.+.|..+.....+.+.+.. .....+... .......+.+|+.+.|.|.+.+
T Consensus 191 G~Y~C~a~n~~~~~~~~~~~~~~~--~~~~~P~v~-----------------------~~~~~~~~~~G~~~~l~C~~~g 245 (523)
T 2rcj_C 191 RSYSCQVTHEGSTVEKTVAPTECS--ASTKGPSVF-----------------------PLAPSSKSTSGGTAALGCLVKD 245 (523)
T ss_pred ceEEEEEEecCcccccceeeeecC--CCCcCCEEE-----------------------ecCCCcccccCCceEEEEEEec
Confidence 999999999877654433332211 000111110 0011124567999999999988
Q ss_pred C-CCc-eEEEEECCccCCC--------CC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCee-
Q psy3045 161 N-PVK-TISWMKDGKPVPD--------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVI- 224 (267)
Q Consensus 161 ~-p~~-~~~W~~~~~~~~~--------~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~- 224 (267)
. |.+ .+.|++++..+.. .+ .+.|.|..+..+| |.|+|.|.|..+.......+.+. .+|.+
T Consensus 246 ~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~---~~P~~~ 321 (523)
T 2rcj_C 246 YFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL---SLPSVF 321 (523)
T ss_pred eeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC---cCceEE
Confidence 7 766 8999999976532 11 1379999999999 99999999999886666555543 23443
Q ss_pred ecCCceeE-EecCCcEEEEEEeecCCC----CcEEEEECCEEcCCC
Q psy3045 225 KESFSDET-LNPGPNYYFKCIASGNPT----PEISWYLDGKKLVNA 265 (267)
Q Consensus 225 ~~~~~~~~-~~~g~~~~l~C~~~~~p~----~~i~W~~~~~~l~~~ 265 (267)
...+.... +.+|+.+.|.|.+.|.|+ +.|.|+|+|+.+...
T Consensus 322 ~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~ 367 (523)
T 2rcj_C 322 LFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNA 367 (523)
T ss_pred ecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCC
Confidence 33343333 788999999999998754 499999999988643
No 42
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=3.6e-26 Score=178.59 Aligned_cols=221 Identities=19% Similarity=0.240 Sum_probs=159.0
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-----EeeEEEEeecccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-----VSGTLIIKEAKVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d 79 (267)
+..+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... ....++.. ....|.|.+++.+|
T Consensus 1 G~~~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~d 73 (305)
T 2nzi_A 1 GAMAPHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEII-----ADGLKYRIQEFKGGYHQLIIASVTDDD 73 (305)
T ss_dssp -CCCCEEEECC--CCEEECTTCCEEEEEEEECSSCCEEEEEETTEECC-----CCSSSEEEEEETTTEEEEEESSCCGGG
T ss_pred CCCCCeeeecc--cceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcc-----cCCCeEEEEECCCCEEEEEEccCChhh
Confidence 35689999888 7899999999999999977 99999633211 11122221 12489999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
+|.|+|.+.|..|.......|.|...+........ ..+....+..|+.+.|.|.+.
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~------------------------~~~~~~~~~~g~~~~l~C~~~ 129 (305)
T 2nzi_A 74 ATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTL------------------------EGMGAVHALRGEVVSIKIPFS 129 (305)
T ss_dssp CSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHH------------------------HSSCCEEEETTCCEEEEEEEE
T ss_pred CeEEEEEEEcCCCCccceEEEEEecCCccCCCccc------------------------cccccEEecCCCEEEEEEEEC
Confidence 99999999999888778888888765432221110 011233677899999999999
Q ss_pred CCCCceEEEEECCccCCCCC---------CCeEEecc-CCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeec---
Q psy3045 160 GNPVKTISWMKDGKPVPDHN---------EPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE--- 226 (267)
Q Consensus 160 ~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~--- 226 (267)
+.|.+.+.|++++..+.... ...|.|.+ +..+|.|.|+|.|.|..|....+..+.+.....+|....
T Consensus 130 g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~ 209 (305)
T 2nzi_A 130 GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSD 209 (305)
T ss_dssp EESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEES
T ss_pred CCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeee
Confidence 99999999999998876432 35688888 999999999999999999888888888875444443211
Q ss_pred -CCceeEE------ecCCcEEEEEEeecCCCCcEEEEECCEE
Q psy3045 227 -SFSDETL------NPGPNYYFKCIASGNPTPEISWYLDGKK 261 (267)
Q Consensus 227 -~~~~~~~------~~g~~~~l~C~~~~~p~~~i~W~~~~~~ 261 (267)
......+ ..|....+.|.+...+.+...|++.+..
T Consensus 210 ~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~ 251 (305)
T 2nzi_A 210 VSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA 251 (305)
T ss_dssp CCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE
T ss_pred ccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc
Confidence 1111111 2355566778887777778888876543
No 43
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.95 E-value=2.1e-25 Score=191.24 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=149.6
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEE-
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV- 96 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~- 96 (267)
....+.+|+++.|.|.+.+ +.|++++... ..+..|.|.+++.+|+|.|+|.+.|..|....
T Consensus 211 ~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i-------------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 277 (642)
T 1e07_A 211 LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQ-------------QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRT 277 (642)
T ss_pred CCcccccCCEEEEEEEcCCCCCcEEEEEECCeEc-------------ccCCceEEecccccCCeEEEEEEEeCCCceEEe
Confidence 4667899999999999977 9999963211 12357999999999999999999998886543
Q ss_pred -EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccC
Q psy3045 97 -ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV 175 (267)
Q Consensus 97 -~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~ 175 (267)
.+.|.|...+.. +... ......+..|+.+.|.|.+.+.| +.+.|+++|..+
T Consensus 278 ~~~~v~v~~~~~~---p~i~------------------------~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l 329 (642)
T 1e07_A 278 TVTTITVYAEPPK---PFIT------------------------SNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSL 329 (642)
T ss_pred eeEEEEEEccCCC---CEEE------------------------cCCceeEecCCcEEEEEECCCCC-ccEEEEECCccC
Confidence 344555432210 0000 01122455678899999998876 699999999887
Q ss_pred CCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCce-EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec
Q psy3045 176 PDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG 247 (267)
Q Consensus 176 ~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 247 (267)
... .+..|.|..+..+|+|.|+|.|.|..+... ..+.+.|.. .|+.....+....+.+|+.+.|.|.+.|
T Consensus 330 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~g 407 (642)
T 1e07_A 330 PVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLY--GPDDPTISPSYTYYRPGVNLSLSCHAAS 407 (642)
T ss_pred CCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEc--CCCCCeecCCceEecCCCcEEEEEEcCc
Confidence 543 357899999999999999999999987643 345566653 4444444556668889999999999999
Q ss_pred CCCCcEEEEECCEEcCCC
Q psy3045 248 NPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 248 ~p~~~i~W~~~~~~l~~~ 265 (267)
.|.+.+.|+++|+.+..+
T Consensus 408 ~p~~~i~W~~~g~~~~~~ 425 (642)
T 1e07_A 408 NPPAQYSWLIDGNIQQHT 425 (642)
T ss_pred cCCCeEEEEECCEEcCCC
Confidence 999999999999988654
No 44
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=1.9e-25 Score=189.46 Aligned_cols=244 Identities=18% Similarity=0.275 Sum_probs=168.5
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceec-------cccCCceEEEE--e-----eE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKV-------AVPLNDRVKQV--S-----GT 69 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~-------~~~~~~~~~~~--~-----~~ 69 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++....... ...+..++... + .+
T Consensus 109 V~~~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 186 (585)
T 2ocw_A 109 VSQGPGLLNDT--KVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 186 (585)
T ss_pred EecCccccCCC--ccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEE
Confidence 34567887766 7889999999999999985 99999743211000 00123333321 1 27
Q ss_pred EEEeecccCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCce--------------------------
Q psy3045 70 LIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPA-------------------------- 123 (267)
Q Consensus 70 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~-------------------------- 123 (267)
|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+.. ......|..+
T Consensus 187 L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~-----~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~ 261 (585)
T 2ocw_A 187 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPE-----LVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENC 261 (585)
T ss_pred EEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCc-----eeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCc
Confidence 999999999999999999998887777777777643211 0011111111
Q ss_pred ------------------------------------------EEEEEeecC-----------------CCcccccCCceE
Q psy3045 124 ------------------------------------------QFTCKYEIS-----------------PPLAAGVEPTVQ 144 (267)
Q Consensus 124 ------------------------------------------~~~c~~~~~-----------------~~~~~~~~~~~~ 144 (267)
.+.|.+... .++.+...+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~ 341 (585)
T 2ocw_A 262 DVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVV 341 (585)
T ss_pred ceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcce
Confidence 335544321 111122334556
Q ss_pred EEecCCCEEEEeEeCCCCCceE----EEEE--CCc--cCCCC------------------CC--CeEEeccCCCCCCeEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTI----SWMK--DGK--PVPDH------------------NE--PVFRIDSVRKEDKGMY 196 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~----~W~~--~~~--~~~~~------------------~~--~~l~i~~~~~~d~g~y 196 (267)
.+.+|+.+.|.|.+.+.|.+.+ .|++ ++. .+... .. ..|.|.++..+|+|.|
T Consensus 342 ~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y 421 (585)
T 2ocw_A 342 KGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFY 421 (585)
T ss_pred EEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEE
Confidence 7778999999999999988876 7999 876 33210 11 2389999999999999
Q ss_pred EEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEee----cCCCCcEEEEECCEEcCC
Q psy3045 197 QCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS----GNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 197 ~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~i~W~~~~~~l~~ 264 (267)
+|.| |..+.......|.|.. .+|.+.. +....+.+|+.+.|.|.+. +.|.+.|.|+++|..+..
T Consensus 422 ~C~a-n~~g~~~~~~~l~V~~--~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~ 489 (585)
T 2ocw_A 422 WCLT-NGDTLWRTTVEIKIIE--GEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALP 489 (585)
T ss_pred EEcc-cCCCccceeEEEEEec--Ccccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeee
Confidence 9999 8887777777777753 4555554 5667899999999999997 677789999999987743
No 45
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=1.9e-26 Score=184.61 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=141.5
Q ss_pred EEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEEE
Q psy3045 25 FKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETV 99 (267)
Q Consensus 25 ~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 99 (267)
..+.+|+++.|.|.+.+ +.|++++. +.......|.|.+++.+|+|.|+|.+.+..+.....+.
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~------------~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~ 173 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRG------------KNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKID 173 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSS------------CEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCC------------cccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEE
Confidence 36789999999999976 99999532 22345678999999999999999999987655555556
Q ss_pred EEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC-----CCCceEEEEECCcc
Q psy3045 100 LTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG-----NPVKTISWMKDGKP 174 (267)
Q Consensus 100 l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-----~p~~~~~W~~~~~~ 174 (267)
+.|...+... ....+.+|+.+.|.|.+.+ .|.+.+.|+++|..
T Consensus 174 l~v~~~p~~~--------------------------------~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~ 221 (363)
T 1wio_A 174 IVVLAFQKAS--------------------------------SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERAS 221 (363)
T ss_dssp ECEECCSCSE--------------------------------EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCC
T ss_pred EEEecCCCCC--------------------------------CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCC
Confidence 6665433211 1226778999999998877 77889999999987
Q ss_pred CCCC-------------------------C--CCeEEeccCCCCCCeEEEEEEEcC--CCCceEEEEEEEecccCCCeee
Q psy3045 175 VPDH-------------------------N--EPVFRIDSVRKEDKGMYQCVIRNE--QESAQASGELKLGGRFDPPVIK 225 (267)
Q Consensus 175 ~~~~-------------------------~--~~~l~i~~~~~~d~g~y~C~~~~~--~~~~~~~~~l~v~~~~~~p~~~ 225 (267)
+... . ...|.|.++..+|+|.|+|.|.|. .|.......|.|..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-------- 293 (363)
T 1wio_A 222 SSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-------- 293 (363)
T ss_dssp CCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE--------
T ss_pred ccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE--------
Confidence 6541 1 348999999999999999999999 88777777776641
Q ss_pred cCCceeEEecCCcEEEEEEeecCCCCc--EEEEECCEEcCC
Q psy3045 226 ESFSDETLNPGPNYYFKCIASGNPTPE--ISWYLDGKKLVN 264 (267)
Q Consensus 226 ~~~~~~~~~~g~~~~l~C~~~~~p~~~--i~W~~~~~~l~~ 264 (267)
..|+.+.|.|.+.|.|+|. +.|+++|+.+..
T Consensus 294 --------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~ 326 (363)
T 1wio_A 294 --------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV 326 (363)
T ss_dssp --------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE
T ss_pred --------ecCCCeeEEEEEccccCCCccEEEEeCCCceee
Confidence 1288899999999999987 999999987753
No 46
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.95 E-value=1.3e-26 Score=169.33 Aligned_cols=172 Identities=20% Similarity=0.249 Sum_probs=130.7
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 83 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .......++.. ....|.|.+++..|+|.|
T Consensus 3 ~~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 78 (194)
T 2a38_A 3 TQAPTFTQPL--QSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVIS--TSTLPGVQISFSDGRAKLTIPAVTKANSGRY 78 (194)
T ss_dssp CEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCC--TTTSTTCEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCCeEEccC--CceEEECCCEEEEEEEEEecCCCEEEEEECCEEcc--cccCCceEEEeCCCEEEEEECCCCcccCEEE
Confidence 4578888877 7889999999999999987 99999643221 11111122222 345899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEe---ccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 84 LCVVNNSVGGESVETVLTVTA---PLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~---~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
+|.+.+..+.......|.|.. ++..... +....+..|+.+.|.|.+.+
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~-----------------------------~~~~~~~~g~~~~l~C~~~g 129 (194)
T 2a38_A 79 SLKATNGSGQATSTAELLVKAETAPPNFVQR-----------------------------LQSMTVRQGSQVRLQVRVTG 129 (194)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCEEEEEEEC-----------------------------CCCEEECTTEEEEEEEEEEE
T ss_pred EEEEEcCCceEeEEEEEEEccCCCCCEEEeC-----------------------------CccEEEcCCCEEEEEEEEEE
Confidence 999999888777777777763 2211111 22337888999999999999
Q ss_pred CCCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 161 NPVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
.|.+.+.|++++..+..... ..|.|..+..+|.|.|+|.|.|..|....++.|.|
T Consensus 130 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 130 IPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 99999999999988764322 26889999999999999999999988777777665
No 47
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=6.1e-27 Score=187.42 Aligned_cols=198 Identities=17% Similarity=0.187 Sum_probs=145.8
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCccee--------ccccCCceEEE-------EeeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRK--------VAVPLNDRVKQ-------VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~--------~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~ 82 (267)
+.+.+.+|+++.|.|.+.+ +.|++++...... .......|+.. ...+|.|.+++.+|+|.
T Consensus 2 e~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred CeEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 4678999999999999976 9999964211110 00123344432 24579999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
|+|.+.+.. ..+.|.|.... ..+ ...+.+|+.+.|.|.+.+.|
T Consensus 82 Y~C~~~n~~----~~~~l~V~~~~---~~~------------------------------~~~v~~G~~v~l~C~~~~~p 124 (363)
T 1wio_A 82 YICEVEDQK----EEVQLLVFGLT---ANS------------------------------DTHLLQGQSLTLTLESPPGS 124 (363)
T ss_dssp EEEEETTEE----EEEEEEEEEEE---ESS------------------------------CSSEESBSCEEEEEECCTTC
T ss_pred EEEEEEECC----CcEEEEEEeCC---CCC------------------------------ceEEecCCCEEEEEEcCCCC
Confidence 999998763 35556655311 010 01467899999999999999
Q ss_pred CceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEE
Q psy3045 163 VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFK 242 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~ 242 (267)
.+.+.|++++..+. .....|.|.++..+|+|.|+|.|.+..+.......+.+. .+|... ....+.+|+.+.|.
T Consensus 125 ~~~v~W~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~---~~p~~~---~~~~~~~G~~v~l~ 197 (363)
T 1wio_A 125 SPSVQCRSPRGKNI-QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL---AFQKAS---SIVYKKEGEQVEFS 197 (363)
T ss_dssp CCCEEEECSSSCEE-EESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE---CCSCSE---EEEEEETBCCEEEE
T ss_pred CCeEEEEcCCCccc-ccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe---cCCCCC---CceEEecCCEEEEE
Confidence 99999999987653 356789999999999999999999876555555555554 233221 45578899999999
Q ss_pred EEeec-----CCCCcEEEEECCEEcCC
Q psy3045 243 CIASG-----NPTPEISWYLDGKKLVN 264 (267)
Q Consensus 243 C~~~~-----~p~~~i~W~~~~~~l~~ 264 (267)
|.+.+ .|.|.+.|+++|..+..
T Consensus 198 C~~~~~~~~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 198 FPLAFTVEKLTGSGELWWQAERASSSK 224 (363)
T ss_dssp CCCCCCCCSSCEEEEEEEEESSCCCCC
T ss_pred EEEecccccCCCceeEEEecCCCCccc
Confidence 98877 78889999999988765
No 48
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=2.4e-26 Score=168.26 Aligned_cols=176 Identities=19% Similarity=0.246 Sum_probs=133.6
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-----EeeEEEEeecccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-----VSGTLIIKEAKVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d 79 (267)
+..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... ....++.. ....|.|.+++.+|
T Consensus 1 G~~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~d 73 (197)
T 2j8h_A 1 GAMAPHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEII-----ADGLKYRIQEFKGGYHQLIIASVTDDD 73 (197)
T ss_dssp --CCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECC-----CCSSSEEEEEETTTEEEEEECSCCGGG
T ss_pred CCCCCEEEEcC--CccEEcCCCEEEEEEEEeecCCCEEEEEECCEECc-----cCCCcEEEEEcCCCEEEEEECcCCHHh
Confidence 35689998887 7899999999999999977 99999633211 11122221 12389999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
+|.|+|.+.+..+.....+.|.|...+........ ..+....+.+|+.+.|.|.+.
T Consensus 74 ~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~------------------------~~~~~~~~~~g~~~~l~C~~~ 129 (197)
T 2j8h_A 74 ATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTL------------------------EGMGAVHALRGEVVSIKIPFS 129 (197)
T ss_dssp CSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCB------------------------TTBEEEEEETTCCCEEEEEEE
T ss_pred CEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccc------------------------cccCeEEEeCCCEEEEEEEEE
Confidence 99999999999888788888888765443222110 112233678899999999999
Q ss_pred CCCCceEEEEECCccCCCC---------CCCeEEecc-CCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 160 GNPVKTISWMKDGKPVPDH---------NEPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 160 ~~p~~~~~W~~~~~~~~~~---------~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.|.+.+.|++++..+... ....|.|.. +..+|+|.|+|.|.|..|....++.|.|.
T Consensus 130 g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 130 GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999999999999887543 235788888 99999999999999999887777777664
No 49
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.94 E-value=5.2e-26 Score=168.53 Aligned_cols=180 Identities=26% Similarity=0.403 Sum_probs=135.1
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE-----eeEEEEeeccc-C
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV-----SGTLIIKEAKV-E 78 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~-~ 78 (267)
+..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... ....++... ...|.|.+++. .
T Consensus 3 g~~pP~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~~ 75 (212)
T 2yd1_A 3 GAHPPEIIRKP--QNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVS-----GTQSRYTVLEQPGGISILRIEPVRAGR 75 (212)
T ss_dssp --CCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECC-----TTSTTEEEEEETTTEEEEEESSCCTTT
T ss_pred CCCCCEEEcCC--CceEEecCCEEEEEEEEccCCCCeEEEEECCEECC-----CCcceeEEEEcCCCeEEEEEEecCCCC
Confidence 56789999988 7889999999999999987 99999633211 122233221 25899999999 9
Q ss_pred CCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 79 DSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 79 d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
|+|.|+|.+.|..+. .+..+.|.|...+....... .+...+....+..|+.+.|.|.
T Consensus 76 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p----------------------~~~~~~~~~~~~~g~~v~l~C~ 133 (212)
T 2yd1_A 76 DDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFP----------------------VITQGPGTRVIEVGHTVLMTCK 133 (212)
T ss_dssp TCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCC----------------------EEEECCCCEEEETTCCEEECCE
T ss_pred cCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCC----------------------eeEeCCCceEeecCCeEEEEEE
Confidence 999999999999888 77788888876432211100 0111223347788999999999
Q ss_pred eCCCCCceEEEEECCccCCCCC------CCeEEeccCCCCCCeEEEEEEEcCCCCceEE-EEEEEecc
Q psy3045 158 YEGNPVKTISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESAQAS-GELKLGGR 218 (267)
Q Consensus 158 ~~~~p~~~~~W~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~-~~l~v~~~ 218 (267)
+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|..... +.|.|...
T Consensus 134 ~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 134 AIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp EECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred eccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 9999999999999998876432 3589999999999999999999999877654 67777643
No 50
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.94 E-value=3.2e-24 Score=181.97 Aligned_cols=234 Identities=19% Similarity=0.302 Sum_probs=171.6
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcceec--------cccCCceEEEE------eeEEEEeecccCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKV--------AVPLNDRVKQV------SGTLIIKEAKVEDS 80 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~--------~~~~~~~~~~~------~~~l~i~~~~~~d~ 80 (267)
..+.+.+|+++.|.|.+.+ +.|++++....... ...+..|+... ..+|.|.+++.+|+
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~ 87 (585)
T 2ocw_A 8 EEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDS 87 (585)
T ss_pred ceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccC
Confidence 6789999999999999887 77999744221000 01123444432 24799999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCC-c------------------------
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPP-L------------------------ 135 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~------------------------ 135 (267)
|.|+|.+.+..+..+..+.|.|...+.+...+.......|..+.|.|.+...++ .
T Consensus 88 G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~ 167 (585)
T 2ocw_A 88 GRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNP 167 (585)
T ss_pred EEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCc
Confidence 999999999888888888999988887777777777888999999998763211 0
Q ss_pred -------------------c--------------------------------cccCCceEEEecCCCEEEEeEeCCCCC-
Q psy3045 136 -------------------A--------------------------------AGVEPTVQTIDFGRPAQFTCKYEGNPV- 163 (267)
Q Consensus 136 -------------------~--------------------------------~~~~~~~~~~~~g~~v~l~C~~~~~p~- 163 (267)
. ....+....+.+|+.+.|.|.+ +.+.
T Consensus 168 ~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~-~~~~~ 246 (585)
T 2ocw_A 168 NYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCAL-GPEVA 246 (585)
T ss_pred cccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEc-CCCCC
Confidence 0 0012344456789999999997 4433
Q ss_pred --ceEEEE-ECCccCC-------------CC--------CCC--eEEeccCCCCCCeEEEEEEEcCCCCce----EEEEE
Q psy3045 164 --KTISWM-KDGKPVP-------------DH--------NEP--VFRIDSVRKEDKGMYQCVIRNEQESAQ----ASGEL 213 (267)
Q Consensus 164 --~~~~W~-~~~~~~~-------------~~--------~~~--~l~i~~~~~~d~g~y~C~~~~~~~~~~----~~~~l 213 (267)
+.+.|+ +++.... .. ... .|.|.++..+|+|.|+|.|.|...... ....|
T Consensus 247 ~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l 326 (585)
T 2ocw_A 247 NVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQL 326 (585)
T ss_pred CceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEE
Confidence 688897 7773211 00 122 799999999999999999999543321 56667
Q ss_pred EEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcE----EEEE--CCE
Q psy3045 214 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEI----SWYL--DGK 260 (267)
Q Consensus 214 ~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i----~W~~--~~~ 260 (267)
.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+ .|++ ||.
T Consensus 327 ~V~---~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~ 376 (585)
T 2ocw_A 327 FVN---EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGR 376 (585)
T ss_pred EEe---cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCC
Confidence 665 5667766777778899999999999999999976 7999 886
No 51
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.94 E-value=1.7e-24 Score=174.76 Aligned_cols=212 Identities=20% Similarity=0.296 Sum_probs=153.1
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceecc-ccCCceEEE----EeeEEEEeecccCCCee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVA-VPLNDRVKQ----VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~-~~~~~~~~~----~~~~l~i~~~~~~d~G~ 82 (267)
+|.|.. + .+..+.+|+++.|.|.+.+ +.|+++.++...... .....++.. ..+.|.|.+++.+|+|.
T Consensus 1 ~P~i~~-~--~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 77 (389)
T 2jll_A 1 QPHIIQ-L--KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGR 77 (389)
T ss_dssp CCEEEE-C--CCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEE
T ss_pred CCeEEe-c--CceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEE
Confidence 467766 3 4678889999999999988 999997333322111 112334433 24689999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
|+|.+.|..|..+..+.|.|..++.+...+.. ..+..|+.+.|.|.+.+.|
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~-----------------------------~~~~~g~~~~l~C~~~g~p 128 (389)
T 2jll_A 78 YDCEAASRIGGHQKSMYLDIEYAPKFISNQTI-----------------------------YYSWEGNPINISCDVKSNP 128 (389)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEEEECCSCCE-----------------------------EEECTTCCEEEEECEEEES
T ss_pred EEEEEEeCCCCcceEEEEEEEeCCEEecCcce-----------------------------EEeccCCEEEEEEEEEecC
Confidence 99999999998888889998876654333222 2677899999999999999
Q ss_pred CceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCcee
Q psy3045 163 VKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDE 231 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~ 231 (267)
.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|.......+.+.....+|... ..
T Consensus 129 ~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~----~~ 204 (389)
T 2jll_A 129 PASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGV----KI 204 (389)
T ss_dssp CCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEE----EE
T ss_pred CCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcce----EE
Confidence 99999999998876432 3469999999999999999999999887777777665433333211 11
Q ss_pred EEecCCcEEEEEEee----cCCCC--cEEEEECCE
Q psy3045 232 TLNPGPNYYFKCIAS----GNPTP--EISWYLDGK 260 (267)
Q Consensus 232 ~~~~g~~~~l~C~~~----~~p~~--~i~W~~~~~ 260 (267)
....+..+.|.|... +.|.. .+.|.+++.
T Consensus 205 ~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 205 IELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp EEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC
T ss_pred eeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC
Confidence 223457788998742 22322 577887764
No 52
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=1.9e-26 Score=188.92 Aligned_cols=220 Identities=17% Similarity=0.285 Sum_probs=143.2
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCccee-----ccccCCceEEEEeeEEEEeecccCCC
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK-----VAVPLNDRVKQVSGTLIIKEAKVEDS 80 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~ 80 (267)
+|.+...+ ....+.+|+.+.|.|.+.+ +.|++++...... .......+.....+.|.|.++..+|+
T Consensus 116 ~P~v~~~~--~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 193 (438)
T 1qgc_4 116 APTVSIFP--PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERH 193 (438)
T ss_dssp CCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CCEEEecC--CChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCC
Confidence 56555433 2223346889999999865 8999964321110 01111222223456899999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|.|+|.+.|..+....... +..... .... ..+....+.+|+.+.|.|.+.+
T Consensus 194 G~Y~C~a~n~~~~~~~~~~--~~~~~~---~~~~------------------------~~~~~~~v~~G~~v~L~C~~~g 244 (438)
T 1qgc_4 194 NSYTCEATHKTSTSPIVKS--FNRNEC---EVML------------------------VESGGGLVKPGGSLKLSCTASG 244 (438)
T ss_dssp CEEEEEEEETTCSSCEEEE--EETTC----CCEE------------------------EEECCEEECTTCCEEEEEEEES
T ss_pred CeEEEEEEecccCCceecc--cccccc---eeEE------------------------ecCCceEEecCCcEEEEEEEcc
Confidence 9999999998776532222 221100 0000 0112336888999999999999
Q ss_pred CC--CceEEEEEC--CccCC-------------------C---------CCCCeEEeccCCCCCCeEEEEEEEcCCC---
Q psy3045 161 NP--VKTISWMKD--GKPVP-------------------D---------HNEPVFRIDSVRKEDKGMYQCVIRNEQE--- 205 (267)
Q Consensus 161 ~p--~~~~~W~~~--~~~~~-------------------~---------~~~~~l~i~~~~~~d~g~y~C~~~~~~~--- 205 (267)
.| .+.+.|+++ +..+. . .....|.|.++..+|+|.|+|.|.|..+
T Consensus 245 ~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 324 (438)
T 1qgc_4 245 FIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEG 324 (438)
T ss_dssp SCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCC
T ss_pred cccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCcc
Confidence 88 679999996 43221 0 1134799999999999999999998433
Q ss_pred --CceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcC
Q psy3045 206 --SAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 263 (267)
Q Consensus 206 --~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~ 263 (267)
.......+.|.. ...+|.+...+....+.+|+.+.|.|.+.|. |.| .|.|+++|..+.
T Consensus 325 ~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~ 387 (438)
T 1qgc_4 325 FAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSG 387 (438)
T ss_dssp CCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSS
T ss_pred ceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCc
Confidence 222234555542 1234555444333456789999999999997 877 999999998764
No 53
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=9.3e-26 Score=185.55 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=146.3
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc----e-----eeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE----N-----MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~----~-----~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
|...| .+..+.+|++++|.|.+.+ + .|++++... . ..+ ...|.|.+++. |+| |+|.
T Consensus 2 i~~~P--~~~~v~~G~~v~L~C~~~gp~p~~~~~~~~w~k~~~~~------~-~~~----~~~l~i~~v~~-d~g-Y~C~ 66 (450)
T 1z7z_I 2 TSVSP--SKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLL------P-GNN----RKVYELSNVQE-DSQ-PMCY 66 (450)
T ss_dssp CEEES--SEEEEETTEEEEEEEECCSSCCCEEEECSSSCEEECCS------S-TTT----EEEEEEEEECS-CBC-CEEE
T ss_pred cccCC--CceEEecCCcEEEEEEccCCCcccccccceeeecceEe------c-CCC----ceEEEEEeccc-CCe-eEEE
Confidence 34445 6889999999999999988 6 899863211 0 111 13789999977 999 9999
Q ss_pred EEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc--
Q psy3045 87 VNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK-- 164 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-- 164 (267)
+.+..+..+..+.|.|..++.... ..+....+.+|+.+.|.|.+.+.|++
T Consensus 67 a~~~~~~~~~~~~l~V~~~P~~~~----------------------------~~~~~~~v~~G~~v~L~C~~~g~~~~~~ 118 (450)
T 1z7z_I 67 SNCPDGQSTAKTFLTVYWTPERVE----------------------------LAPLPSWQPVGKNLTLRCQVEGGAPRAN 118 (450)
T ss_dssp EEETTEEEEEECEEEEEBCCSEEE----------------------------ECCCCSEECTTSEEEEEEEEECCBCGGG
T ss_pred EeCCCCcceeEEEEEEEeCCCcce----------------------------ecCCCceEeeCCeEEEEEEecCCCCCcC
Confidence 986655567777788776433210 01122367889999999999998877
Q ss_pred -eEEEEECCccCCCC------CCCeEEeccCCCCCCeEEEEEEEcCCCCce--------EEEEEEEecc-cCCCeeecCC
Q psy3045 165 -TISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ--------ASGELKLGGR-FDPPVIKESF 228 (267)
Q Consensus 165 -~~~W~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~--------~~~~l~v~~~-~~~p~~~~~~ 228 (267)
.+.|++++..+... ....|.|..+..+|+|.|+|.|.|..+... ....+.+... ..+|.+...
T Consensus 119 ~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~- 197 (450)
T 1z7z_I 119 LTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP- 197 (450)
T ss_dssp EEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECC-
T ss_pred cEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCc-
Confidence 99999999876432 235899999999999999999999866432 1223333321 123443322
Q ss_pred ceeEEecCCcEEEEEEeecC-C--CCcEEEEECCEEcCC
Q psy3045 229 SDETLNPGPNYYFKCIASGN-P--TPEISWYLDGKKLVN 264 (267)
Q Consensus 229 ~~~~~~~g~~~~l~C~~~~~-p--~~~i~W~~~~~~l~~ 264 (267)
..+.+|+.+.|.|.+.|. | .+.+.|+++|+.+..
T Consensus 198 --~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~ 234 (450)
T 1z7z_I 198 --RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (450)
T ss_dssp --SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC
T ss_pred --eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc
Confidence 578899999999999998 6 679999999988754
No 54
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=1.4e-25 Score=184.41 Aligned_cols=195 Identities=17% Similarity=0.192 Sum_probs=132.8
Q ss_pred EEecCCCeEEEEEEecc--------eeeeecccCcceeccccCCceEEEEeeEEEE---eecccCCCe--eEEEEEEcCC
Q psy3045 25 FKKPGGESFALLCEAQE--------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLII---KEAKVEDSG--KYLCVVNNSV 91 (267)
Q Consensus 25 ~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i---~~~~~~d~G--~Y~C~~~~~~ 91 (267)
..+.+|+.+.|.|.+.+ +.|++++..... ++......+.+ .+++.+|+| .|+|.+.|..
T Consensus 198 ~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~ 269 (450)
T 1z7z_I 198 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--------TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGN 269 (450)
T ss_dssp SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--------EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETT
T ss_pred eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--------eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCC
Confidence 58899999999999875 889996332211 22222222222 277899999 9999999998
Q ss_pred CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEEC
Q psy3045 92 GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKD 171 (267)
Q Consensus 92 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~ 171 (267)
+.......|.|...+.+.+.. ....+.+|+.+.|.|.+. |.+.+.| +
T Consensus 270 g~~~~~~~l~V~~~~~p~i~~-----------------------------~~~~v~~G~~v~l~C~~~--p~p~i~W--~ 316 (450)
T 1z7z_I 270 QSQETLQTVTIYSFPAPNVIL-----------------------------TKPEVSEGTEVTVKCEAH--PRAKVTL--N 316 (450)
T ss_dssp EEEEEEEEEEEECCCCCEEEE-----------------------------SCSEEETTCEEEEEEEC-------------
T ss_pred ccEEEEEEEEEecCCCCeEec-----------------------------CCeeEeCCCcEEEEEecC--CCCEeEE--C
Confidence 888778888887643321110 112688899999999987 8889999 7
Q ss_pred CccC-CCCCCCeEEeccCCCCCCeEEEEEEEcCCC-Cc---eEEEEEEEecccCCCeeecCC--ceeEEecCCcEEEEEE
Q psy3045 172 GKPV-PDHNEPVFRIDSVRKEDKGMYQCVIRNEQE-SA---QASGELKLGGRFDPPVIKESF--SDETLNPGPNYYFKCI 244 (267)
Q Consensus 172 ~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-~~---~~~~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~ 244 (267)
|..+ ..+....|.|..+..+|+|.|+|.|.|..+ .. ..+..|.|. .+|.+.... .+..+.+|+.+.|.|.
T Consensus 317 g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~---~~P~~~~~~~p~~~~~~~g~~~~l~C~ 393 (450)
T 1z7z_I 317 GVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL---YGPRLDERDCPGNWTWPENSQQTPMCQ 393 (450)
T ss_dssp -------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEE---EEEECCSTTSCSEEEEETTCEECCCCC
T ss_pred CEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEe---cCCceeeccCCCceeEcCCCeEEEEEe
Confidence 7777 344567899999999999999999997654 32 245555554 455555543 5668999999999999
Q ss_pred eecCCCCcEEEEECCEEcC
Q psy3045 245 ASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 245 ~~~~p~~~i~W~~~~~~l~ 263 (267)
+.|+|.|.+.|+|+|..+.
T Consensus 394 ~~g~P~p~i~W~~~g~~~~ 412 (450)
T 1z7z_I 394 AWGNPLPELKCLKDGTFPL 412 (450)
T ss_dssp CEEESCCEEEEEETTTEEC
T ss_pred cccCCCCcEEEEECCcccC
Confidence 9999999999999997543
No 55
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.93 E-value=6.6e-26 Score=185.77 Aligned_cols=207 Identities=19% Similarity=0.318 Sum_probs=140.6
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecccCCCe
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAKVEDSG 81 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~~~d~G 81 (267)
..+.+.+|+++.|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.+|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (438)
T 1qgc_4 9 ASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVA 88 (438)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCe
Confidence 6889999999999999864 89999643322110 01123444332 358999999999999
Q ss_pred eEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 82 KYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 82 ~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
.|+|.+.+..+.. ...+.|.|.... ..+.... . +.......|+.+.|.|.+.+
T Consensus 89 ~Y~C~a~n~~~~~~~~~~~l~V~~~~---~~P~v~~----------------------~-~~~~~~~~g~~~~l~C~~~g 142 (438)
T 1qgc_4 89 TYYCQQSNEVPLTFGAGTKLDLKRAD---AAPTVSI----------------------F-PPSSEQLTSGGASVVCFLNN 142 (438)
T ss_dssp EEEEEECSSTTCCBCCCEEEEECCCC---BCCEEEE----------------------E-CCCHHHHHTTEEEEEEEEEE
T ss_pred eEEEEEecCCCccccCceeEEecCCC---CCCEEEe----------------------c-CCChhhccCCceEEEEEEcc
Confidence 9999999887642 334555554211 1111110 0 00012235789999999987
Q ss_pred -CCCc-eEEEEECCccCCCC-----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCC
Q psy3045 161 -NPVK-TISWMKDGKPVPDH-----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 222 (267)
Q Consensus 161 -~p~~-~~~W~~~~~~~~~~-----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p 222 (267)
.|.+ .+.|+++|..+... + ...|.|..+..+|+|.|+|.|.|..+....... +.....++
T Consensus 143 ~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~--~~~~~~~~ 220 (438)
T 1qgc_4 143 FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS--FNRNECEV 220 (438)
T ss_dssp EBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEE--EETTC-CC
T ss_pred ccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecc--ccccccee
Confidence 5666 99999999876543 1 136889999999999999999998876543333 33221223
Q ss_pred eeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEEC
Q psy3045 223 VIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 258 (267)
Q Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~ 258 (267)
.+ ..+....+.+|+.+.|.|.+.|.| .+.+.|+|+
T Consensus 221 ~~-~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 257 (438)
T 1qgc_4 221 ML-VESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQ 257 (438)
T ss_dssp EE-EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EE-ecCCceEEecCCcEEEEEEEcccccCCcEEEEEEC
Confidence 33 334556789999999999999998 579999996
No 56
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=4.9e-25 Score=161.17 Aligned_cols=173 Identities=19% Similarity=0.300 Sum_probs=133.2
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDS 80 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~ 80 (267)
...+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++... ....+... ...+|.|.+++.+|+
T Consensus 4 ~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~d~ 75 (197)
T 3lcy_A 4 SGEAPGIRKEM--KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKEL------IQSRKYKMSSDGRTHTLTVMTEEQEDE 75 (197)
T ss_dssp CCEEEEEEECC--CCEEEETTSEEEEEEEEEEESCCEEEEEETTEEE------CCCSSEEEEESSSEEEEEEECCSGGGC
T ss_pred cCCCCcccccC--CceEEeCCCcEEEEEEEecCCCCEEEEEECCEEC------CCCccEEEEeCCCEEEEEEecCCccCC
Confidence 34578888887 7899999999999999977 9999963221 11222222 123899999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|.|+|.+.+..+.......|.|...+....... ......+..|+.+.|.|.+.+
T Consensus 76 G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~--------------------------~~~~~~~~~g~~~~l~C~~~~ 129 (197)
T 3lcy_A 76 GVYTCIATNEVGEVETSSKLLLQATPQFHPGYP--------------------------LKEKYYGAVGSTLRLHVMYIG 129 (197)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEECTTSC--------------------------CCSEEEEETTSCEEEEEEEEE
T ss_pred EEEEEEEECCCCceeEEEEEEEEcCCCCCCCcc--------------------------CCcceeecCCCeEEEEEEEee
Confidence 999999999888877778888876544322110 012236778999999999999
Q ss_pred CCCceEEEEECCccCCCCCC---------CeEEeccCCC-CCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 161 NPVKTISWMKDGKPVPDHNE---------PVFRIDSVRK-EDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~-~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.|.+.+.|++++..+..... ..|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 130 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 130 RPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp ESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 99999999999988865432 5788999985 89999999999999988888777775
No 57
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.93 E-value=3.1e-25 Score=162.16 Aligned_cols=171 Identities=18% Similarity=0.304 Sum_probs=125.1
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEec-c-----eeeeecccCcceecc----ccCCc---eEEEEeeEEEEeecccC
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQ-E-----NMWFKFIEGSSRKVA----VPLND---RVKQVSGTLIIKEAKVE 78 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~-~-----~~W~~~~~~~~~~~~----~~~~~---~~~~~~~~l~i~~~~~~ 78 (267)
++|.|...+ .+..+.+|+++.|.|.+. + +.|++++........ ..... .....+..|.|.+++..
T Consensus 1 e~~~~~~~p--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 1 EESPFVGNP--GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp -CCSEEECC--CCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CCCeeccCh--hheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence 368888888 789999999999999999 5 999996332111100 00000 01111568999999999
Q ss_pred CCeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 79 DSGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 79 d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
|+|.|+|.+.+..+.. ...+.|.|..++.+...+ ....+.+|+.+.|.|.
T Consensus 79 d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~-----------------------------~~~~~~~g~~~~l~C~ 129 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEP-----------------------------EDRTVAANTPFNLSCQ 129 (195)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEECCSCEEEECC-----------------------------CCEEECTTCCEEEEEE
T ss_pred CCcEEEEEEEeCCCceecccEEEEEecCCeEEcCC-----------------------------CcEEEcCCCEEEEEeE
Confidence 9999999999977653 333667776554332222 2237788999999999
Q ss_pred eCCCCCc-eEEEEECCccCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCce-EEEEEEE
Q psy3045 158 YEGNPVK-TISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKL 215 (267)
Q Consensus 158 ~~~~p~~-~~~W~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~v 215 (267)
+.+.|.+ .+.|++++..+... ....|.|.++. |+|.|+|.|.|..|... ....|.|
T Consensus 130 ~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 130 AQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999988 99999999988654 45788888877 78999999999988765 4666665
No 58
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=1.8e-24 Score=157.43 Aligned_cols=165 Identities=22% Similarity=0.300 Sum_probs=125.7
Q ss_pred CCCcccCCCCceeEEecC-CCeEEEEEEecc-------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVSDIIRFKKPG-GESFALLCEAQE-------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~-g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
.||.|...+ ...+.+ |+++.|.|.+.+ +.|++++.... ..+....+..|.|.+++.+|+|.|
T Consensus 2 ~~P~i~~~~---~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y 71 (190)
T 2wv3_A 2 NEPRIVTSE---EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELT-------ATRKNASNMEYRINKPRAEDSGEY 71 (190)
T ss_dssp -CCEEEECC---CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECT-------TCCBCCSEEEEEESSCCGGGCEEE
T ss_pred CCCcccccc---eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECc-------ccceEeccEEEEEecCCcccCEEE
Confidence 467777643 566667 999999999876 89999633211 111112457899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
+|.+.+. +.....+.|.|..++.....+. ...+..|+.+.|.|.+.+.|.
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~-----------------------------~~~~~~g~~v~l~C~~~g~p~ 121 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVKAAPDITGHKR-----------------------------SENKNEGQDAMMYCKSVGYPH 121 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEECCCEEEEECS-----------------------------EEEEETTSCEEEEEEEECSSC
T ss_pred EEEEEeC-CcccccEEEEEecCCcccccCC-----------------------------cceeeCCCcEEEEEEeCccCC
Confidence 9999998 7778888888877554332222 236888999999999999999
Q ss_pred ceEEEEE--CCccCCC---C---------CCCeEEeccCC-CCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 164 KTISWMK--DGKPVPD---H---------NEPVFRIDSVR-KEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 164 ~~~~W~~--~~~~~~~---~---------~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.+.|++ ++..+.. . ....|.|.++. .+|.|.|+|.|.|..|....+..|.|.
T Consensus 122 p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 122 PEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 6655421 1 12379999999 799999999999999988888877775
No 59
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=4.6e-25 Score=159.42 Aligned_cols=164 Identities=22% Similarity=0.342 Sum_probs=121.0
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE--E----EeeEEEEeecccCCCe
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK--Q----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~--~----~~~~l~i~~~~~~d~G 81 (267)
+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ....+.. . ....|.|.+++.+|+|
T Consensus 2 ~~~~~~~p--~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 73 (182)
T 1rhf_A 2 GLKLMGAP--VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVV------QNLDQLYIPVSEQHWIGFLSLKSVERSDAG 73 (182)
T ss_dssp -----CCC--EEEEEETTCCEEEEEEEESCSSCCEEEEETTEEC------CSSEEEEEEEETTEEEEEEEESSCCGGGCE
T ss_pred CCEEEeCC--cceEEeCCCcEEEEEEEeCCCCCeEEEEECCeec------CCCCceEEEecCCCceEEEEEeecCcccCe
Confidence 56787777 7899999999999999987 9999963321 1112211 1 1368999999999999
Q ss_pred eEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 82 KYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 82 ~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
.|+|.+.+..+. .+..+.|.|..++.....+. ...+..|+.+.|.|.+.+
T Consensus 74 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~g 124 (182)
T 1rhf_A 74 RYWCQVEDGGETEISQPVWLTVEGVPFFTVEPK-----------------------------DLAVPPNAPFQLSCEAVG 124 (182)
T ss_dssp EEEEEESSCTTCEECCCEEEEEECSCEEEECCC-----------------------------CEEECTTCCEEEEEEEEC
T ss_pred EEEEEEEcCCCcEEEEEEEEEEecCCeEEecCc-----------------------------ceEecCCCEEEEEeEecC
Confidence 999999988665 45667777776544333222 237888999999999999
Q ss_pred CCCc-eEEEEECCccCCCC--CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEE
Q psy3045 161 NPVK-TISWMKDGKPVPDH--NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKL 215 (267)
Q Consensus 161 ~p~~-~~~W~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v 215 (267)
.|.+ .+.|++++..+... ....|.|.++ +|+|.|+|.|.|..|.... ++.|.|
T Consensus 125 ~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 125 PPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 9988 99999999888654 5677888877 5899999999999876643 555544
No 60
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=1.3e-24 Score=160.67 Aligned_cols=172 Identities=24% Similarity=0.396 Sum_probs=129.1
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcce------eccccCCceEEEEeeEEEEeecccCCCee
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSR------KVAVPLNDRVKQVSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 82 (267)
+.|...+ ..+.+.+|+++.|.|.+.+ +.|++++..... ........++......|.|.+++..|+|.
T Consensus 2 ~~v~~~~--~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 2 GSVYTAQ--SDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGE 79 (212)
T ss_dssp CEEECSC--SEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEE
T ss_pred ceEEecC--CCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeE
Confidence 3455555 7899999999999999987 999997443110 01123455666667899999999999999
Q ss_pred EEEEEEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE-eC
Q psy3045 83 YLCVVNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK-YE 159 (267)
Q Consensus 83 Y~C~~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~-~~ 159 (267)
|+|.+.+..|. ....+.|.|..++.....+. ...+.+|+.+.|.|. +.
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~~ 130 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISV-----------------------------PSSVTIGNRAVLTCSEHD 130 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCCEEEC-----------------------------CSEEETTSCEEEEEECSC
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCcccCC-----------------------------ccccCCCCeEEEEEEccc
Confidence 99999998763 45667777776544222111 116778999999999 78
Q ss_pred CCCCceEEEEECCc-cCCC----------------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceE--EEEEEEe
Q psy3045 160 GNPVKTISWMKDGK-PVPD----------------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA--SGELKLG 216 (267)
Q Consensus 160 ~~p~~~~~W~~~~~-~~~~----------------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~--~~~l~v~ 216 (267)
+.|.+.+.|++++. .+.. .....|.|.++..+|.|.|+|.|.|..|.... .+.|.|.
T Consensus 131 ~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 131 GSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred CcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 88999999999998 7753 23568999999999999999999999988744 4444443
No 61
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.93 E-value=4.2e-26 Score=181.26 Aligned_cols=216 Identities=16% Similarity=0.244 Sum_probs=140.3
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (344)
T 1za6_B 8 GAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR 87 (344)
T ss_dssp CCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC
Confidence 4678999999999999874 99999743322110 01234455542 2589999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.+..+.......|.|...+. ..+..... +....+.+|+.+.|.|
T Consensus 88 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~--~~P~i~~~-----------------------~~~~~~~~g~~v~L~C 142 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMAYWGQGTLVTVSSAST--KGPSVFPL-----------------------APSSKSTSGGTAALGC 142 (344)
T ss_dssp GGGCEEEEEEETTTTCEECCCEEEEECSSCC--BCCEEEEE-----------------------CCSCTTTSSSEEEEEE
T ss_pred cccCEEEEEEEecCcceecCcEEEEEecCCC--CCCeEEEc-----------------------cccccccCCCcEEEEE
Confidence 9999999999988544333445666653111 11111100 0011345799999999
Q ss_pred EeCCC-CC-ceEEEEECCccCC---------CCC----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe-----
Q psy3045 157 KYEGN-PV-KTISWMKDGKPVP---------DHN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG----- 216 (267)
Q Consensus 157 ~~~~~-p~-~~~~W~~~~~~~~---------~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~----- 216 (267)
.+.|. |. +.+.|++++..+. .+. .+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 143 ~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~ 221 (344)
T 1za6_B 143 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKT 221 (344)
T ss_dssp EEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC---
T ss_pred EEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccc
Confidence 99887 54 7999999987642 111 1267888887777 99999999987754333332211
Q ss_pred ----------------cccCCCeeecCCceeEEecCCcEEEEEEeecCCC--CcEEEEECCEEcCC
Q psy3045 217 ----------------GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 264 (267)
Q Consensus 217 ----------------~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~l~~ 264 (267)
....+|.+...+......+|..+.|.|.+.|+++ +.+.|++||+.+..
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 287 (344)
T 1za6_B 222 HTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 287 (344)
T ss_dssp -----------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCS
T ss_pred cccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCC
Confidence 1124566554433222335777999999998643 58999999988753
No 62
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=1e-24 Score=161.56 Aligned_cols=178 Identities=26% Similarity=0.396 Sum_probs=129.7
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeec-ccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEA-KVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~-~~~d 79 (267)
+..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++..... ....... ....|.|.++ +..|
T Consensus 3 ~~~~P~~~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~~d 75 (212)
T 2yd6_A 3 GETPPRFTRTP--VDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSN-----QRFEVIEFDDGSGSVLRIQPLRTPRD 75 (212)
T ss_dssp -CEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-----TTEEEEEEGGGTEEEEEECSCCTTTT
T ss_pred CCCCCeEEeCc--ceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCC-----CceeEEEEcCCCceEEEEeccCCCCC
Confidence 45678999887 7889999999999999987 999996432110 0111111 2357999999 5999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
+|.|+|.+.|..+.....+.|.|...+........ +...+....+..|+.+.|.|.+.
T Consensus 76 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~----------------------~~~~~~~~~~~~g~~v~l~C~~~ 133 (212)
T 2yd6_A 76 EAIYECVASNNVGEISVSTRLTVLREDQIPRGFPT----------------------IDMGPQLKVVERTRTATMLCAAS 133 (212)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCE----------------------EEECCCCEEEETTSCEEEEEEEE
T ss_pred CeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcce----------------------eecCCcceeEecCCCEEEEEEec
Confidence 99999999999888778888888764321111000 01112334678899999999999
Q ss_pred CCCCceEEEEECCccCCCC------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEEe
Q psy3045 160 GNPVKTISWMKDGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLG 216 (267)
Q Consensus 160 ~~p~~~~~W~~~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v~ 216 (267)
+.|.+.+.|++++..+... ....|.|.++..+|.|.|+|.|.|..|.... .+.+.+.
T Consensus 134 g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 134 GNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp CSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 9999999999999887643 1378999999999999999999999887654 3455554
No 63
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.93 E-value=8.9e-25 Score=176.28 Aligned_cols=163 Identities=69% Similarity=1.098 Sum_probs=135.1
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
....+.+|+++.|.|.+.+ +.|++++.+...........++...++.|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 299 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE 299 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEE
Confidence 3456889999999999887 99999755544444445566666677899999999999999999999999988888
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCC
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD 177 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~ 177 (267)
+.|.|..++.....+ ....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 300 ~~l~V~~~p~~~~~~-----------------------------~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~ 350 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDP-----------------------------PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH 350 (388)
T ss_dssp EEEEEEEEEEEEEES-----------------------------SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC
T ss_pred EEEEEeCCCccccCC-----------------------------CcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc
Confidence 888888755433322 233788899999999999999999999999998854
Q ss_pred CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 178 HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 178 ~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
....|.|..+..+|+|.|+|.|.|..|....++.|.|
T Consensus 351 -~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 351 -SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp -CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred -CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 4678999999999999999999999998888877765
No 64
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.93 E-value=7.8e-25 Score=159.49 Aligned_cols=168 Identities=21% Similarity=0.344 Sum_probs=128.8
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~ 84 (267)
.||.|...+.+.++.+.+|+++.|.|.+.+ +.|++++... ....++.. .+..|.|.+++..|+|.|+
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 74 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLI------EENEKYILKGSNTELTVRNIINSDGGPYV 74 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEEC------CCSSSEEEETTTTEEEECSCCGGGCEEEE
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEc------CCCccEEEeCCeeEEEEecCChhcCcEEE
Confidence 368888877656899999999999999986 9999963321 11223322 3457999999999999999
Q ss_pred EEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 85 CVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 85 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
|.+.+..+.....+.|.|...+.....+ ...+..|+.+.|.|.+.+.|.+
T Consensus 75 C~~~~~~~~~~~~~~l~V~~~p~~~~~~------------------------------~~~~~~g~~v~l~C~~~~~p~~ 124 (192)
T 2va4_A 75 CRATNKAGEDEKQAFLQVFVQPHIIQLK------------------------------NETTYENGQVTLVCDAEGEPIP 124 (192)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEEEEEC------------------------------CEEECTTSEEEEEEEEEEESCC
T ss_pred EEEEccccccceEEEEEEEccCcccccC------------------------------cceEEeCCeEEEEEEecCCCCC
Confidence 9999988877777788886654322111 1256679999999999999999
Q ss_pred eEEEEEC--CccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 165 TISWMKD--GKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 165 ~~~W~~~--~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
.+.|+++ +..+... ....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 125 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 125 EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 9999998 4333221 1257999999999999999999999998777777665
No 65
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.93 E-value=6.5e-25 Score=159.84 Aligned_cols=167 Identities=25% Similarity=0.370 Sum_probs=124.5
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc------eeeee-cccCcceeccccCCceEEE-----EeeEEEEeecccCCC
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFK-FIEGSSRKVAVPLNDRVKQ-----VSGTLIIKEAKVEDS 80 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~-~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d~ 80 (267)
|+.|...+ .+..+.+|+++.|.|.+.+ +.|++ ++. ... ....++.. ....|.|.+++.+|+
T Consensus 2 p~~v~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~--~~~---~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 74 (191)
T 1epf_A 2 VLQVDIVP--SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE--KLS---PNQQRISVVWNDDDSSTLTIYNANIDDA 74 (191)
T ss_dssp -CCEEEES--SSEEEETTCCEEEEEEECCCSCCCEEEEECTTSC--EEC---CBSSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred ceEEEecC--CCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCc--ccc---CCCCeEEEEECCCCceEEEEccCCcccC
Confidence 45677766 7889999999999999887 99999 422 111 11223322 246899999999999
Q ss_pred eeEEEEEEcCCC-ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 81 GKYLCVVNNSVG-GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 81 G~Y~C~~~~~~~-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
|.|+|.+.+..+ .....+.|.|..++.....+. ...+.+|+.+.|.|.+.
T Consensus 75 G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~ 125 (191)
T 1epf_A 75 GIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPT-----------------------------PQEFKEGEDAVIVCDVV 125 (191)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEECCSEEEECCS-----------------------------SEECCTTSCEEECCEEE
T ss_pred EEEEEEEEcCCCcceEEEEEEEeecCceEecCCC-----------------------------cEeecCCCeEEEEEEEC
Confidence 999999999874 456666777765444322222 23678899999999999
Q ss_pred CCCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 160 GNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 160 ~~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
+.|.+.+.|++++..+... .+..|.|..+..+|+|.|+|.|.|..+.......+.+
T Consensus 126 g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 126 SSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 9999999999999876421 3458999999999999999999998865555555544
No 66
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=8.3e-25 Score=159.37 Aligned_cols=170 Identities=26% Similarity=0.374 Sum_probs=130.0
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 83 (267)
..+|.|...+ .++.+.+|+++.|.|.+.+ +.|++++.... ....++.. .+..|.|.+++..|+|.|
T Consensus 5 ~~~P~i~~~~--~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 77 (192)
T 2iep_A 5 PKAPVITTPL--ETVDALVEEVATFMCAVESYPQPEISWTRNKILIK-----LFDTRYSIRENGQLLTILSVEDSDDGIY 77 (192)
T ss_dssp CEEEEESSCC--CEEEEETTSCEEEECCEEEESCCEEEEEETTEECC-----TTCTTEEEEGGGTEEEESSCCGGGCEEE
T ss_pred CCCceeecCc--cceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEcc-----ccCccEEEcCCccEEEEcCCCcccCeEE
Confidence 3468888777 7889999999999999976 99999632111 11233332 335799999999999999
Q ss_pred EEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 84 LCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 84 ~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
+|.+.+..+. ......|.|...+.....+. ...+..|+.+.|.|.+.+.|
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~g~p 128 (192)
T 2iep_A 78 CCTANNGVGGAVESCGALQVKMKPKITRPPI-----------------------------NVKIIEGLKAVLPCTTMGNP 128 (192)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEEEEEEECCC-----------------------------CEEEETTSCEEECCEEEEES
T ss_pred EEEEEcCCCceeEeEEEEEEEeCCccccCCc-----------------------------ceEEeCCCcEEEEEEEeccC
Confidence 9999998877 45666777776544333222 23678899999999999999
Q ss_pred CceEEEEECCccCCCC------CCCeEEeccCCCCCCeEEEEEEEcCCCCce-EEEEEEEe
Q psy3045 163 VKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKLG 216 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~v~ 216 (267)
.+.+.|++++..+... ....|.|..+..+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 129 ~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 129 KPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp CCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 8999999999887643 345799999999999999999999987663 34666664
No 67
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.93 E-value=3.2e-24 Score=155.92 Aligned_cols=165 Identities=22% Similarity=0.353 Sum_probs=122.3
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCeeEEEEE
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
|...+ .+..+.+|+++.|.|.+.+ +.|++++. .. +....++... ...|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~~~--~~~~v~~G~~v~L~C~~~~~p~~v~W~~~~~-~~----~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 77 (189)
T 2v44_A 5 VTISL--SKVELSVGESKFFTCTAIGEPESIDWYNPQG-EK----IISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 77 (189)
T ss_dssp EEESC--SEEEEETTCCEEEEEEEEECCSEEEEECTTS-CB----CCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEecC--CceEEecCCcEEEEEEeecCCeeEEEEeCCC-Cc----cCCCceEEEECCCCeEEEEEccCCcccCeEEEEEE
Confidence 44445 7889999999999999987 99999322 11 1122333322 248999999999999999999
Q ss_pred EcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 88 NNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 88 ~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
.+..+.. +..+.|.|..++.....+. ...+..|+.+.|.|.+.+.|.+.+
T Consensus 78 ~~~~g~~~~~~~~l~v~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~g~p~p~v 128 (189)
T 2v44_A 78 TDAKGQTQEATVVLEIYQKLTFREVVS-----------------------------PQEFKQGEDAEVVCRVSSSPAPAV 128 (189)
T ss_dssp ECTTSCEEEEEEEEEEECCCEEESCCC-----------------------------SEEEETTSCEEECCEEECSSCCEE
T ss_pred EeCCCCcEEEEEEEEEecCCceeecCC-----------------------------cEEEeCCCCEEEEEEECcCCCCcE
Confidence 9988764 6677777776543322221 226788999999999999999999
Q ss_pred EEEECCccCCC--------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 167 SWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 167 ~W~~~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.|++++..+.. .....|.|.++..+|+|.|+|.|.|..+.......+.+.
T Consensus 129 ~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 129 SWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEE
Confidence 99999987642 134689999999999999999999998766655555443
No 68
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.93 E-value=4.7e-24 Score=164.91 Aligned_cols=174 Identities=24% Similarity=0.356 Sum_probs=133.3
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
..+|.+...+. ....+.+|+.+.|.|.+.+ +.|++++.... ...............|.|.+++.+|+|.|+|
T Consensus 96 ~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 172 (284)
T 2rik_A 96 QEPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQ--ESSKFRMSFVESVAVLEMYNLSVEDSGDYTC 172 (284)
T ss_dssp ECCCEEEECCC-SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECC--CSSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred cCCCcccccCC-CceEecCCceEEEEEEEeeeCCCEEEEEECCEECc--CCCcEEEEEcCCEEEEEECCCCcccCEEEEE
Confidence 34666655442 4677899999999999987 99999633211 1101111111234689999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+.|..|.....+.|.|..++.....+.. ..+..|+.+.|.|.+.+.|.+.
T Consensus 173 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~-----------------------------~~~~~g~~v~l~C~~~g~p~~~ 223 (284)
T 2rik_A 173 EAHNAAGSASSSTSLKVKEPPVFRKKPHP-----------------------------VETLKGADVHLECELQGTPPFQ 223 (284)
T ss_dssp EEECSSCEEEEEEEEEEECCCBCCSCCCC-----------------------------EEECTTCCEEEEEECBSSSCCE
T ss_pred EEEcCCCceeEEEEEEEecCCcceeCCCc-----------------------------ceecCCCeEEEEEEEEecCCCE
Confidence 99999988888888888876654444332 2678899999999999999999
Q ss_pred EEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 166 ISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 166 ~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 224 v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 224 VSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 999999988764432 578899999999999999999999988888777764
No 69
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.92 E-value=4.8e-24 Score=160.94 Aligned_cols=184 Identities=23% Similarity=0.352 Sum_probs=131.1
Q ss_pred ccccCCCcccCCCC--ceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccC-CceEEEEeeEEEEeecccCC
Q psy3045 8 PVGFKAPTFSSVSD--IIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPL-NDRVKQVSGTLIIKEAKVED 79 (267)
Q Consensus 8 ~~~~~~P~~~~~~~--~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d 79 (267)
.+...+|.|...+. ...+.+.+|+++.|.|.+.+ +.|++++.... ..... .........+|.|.+++..|
T Consensus 6 ~v~~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~d 83 (241)
T 3grw_A 6 GVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFR--GEHRIGGIKLRHQQWSLVMESVVPSD 83 (241)
T ss_dssp -----CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECC--GGGSTTCCEEEGGGTEEEECSCCGGG
T ss_pred CccCCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccC--CCCcccceeeeccceEEEEEeCCccc
Confidence 34556787765532 25789999999999999987 99999643221 11111 12233345689999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
+|.|+|.+.+..+.......|.|...... .+ ......+....+..|+.+.|.|.+.
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~--~~----------------------~~~~~~~~~~~~~~g~~v~L~C~~~ 139 (241)
T 3grw_A 84 RGNYTCVVENKFGSIRQTYTLDVLERSPH--RP----------------------ILQAGLPANQTAVLGSDVEFHCKVY 139 (241)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCCC--CC----------------------EEEECTTCSEECCTTCCEEEEEEEE
T ss_pred CEEEEEEEeecCCceEEEEEEEEeccCCC--Cc----------------------eeecCCCccceecCCCEEEEEEEEe
Confidence 99999999998888777778877653211 00 0011112334678899999999999
Q ss_pred CCCCceEEEEE----CCccCCCCC-----------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 160 GNPVKTISWMK----DGKPVPDHN-----------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 160 ~~p~~~~~W~~----~~~~~~~~~-----------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
+.|.+.+.|++ ++..+.... ...|.|..+..+|+|.|+|.|.|..|....++.|.|..
T Consensus 140 ~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 140 SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp CSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred cCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 99999999999 787765432 24699999999999999999999999888888887764
No 70
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.92 E-value=7e-25 Score=160.79 Aligned_cols=157 Identities=20% Similarity=0.244 Sum_probs=111.5
Q ss_pred eEEecCCCeEEEEEEe---cc-----eeeeecccCcceeccc-----------cCCceEE----EEeeEEEEeecccCCC
Q psy3045 24 RFKKPGGESFALLCEA---QE-----NMWFKFIEGSSRKVAV-----------PLNDRVK----QVSGTLIIKEAKVEDS 80 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~---~~-----~~W~~~~~~~~~~~~~-----------~~~~~~~----~~~~~l~i~~~~~~d~ 80 (267)
++++..|++++|.|.+ .+ +.|+|++......... ....++. .....|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 5688999999999964 33 9999975433221110 1111121 1235799999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|.|+|.+.|..|.....+.|.|..++.....+. ...+.+|+.+.|.|.+.|
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~-----------------------------~~~v~~g~~~~l~C~~~G 132 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSE-----------------------------RSQFPDFSVLTVTCTVNA 132 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEE-----------------------------ECCSSCSCCEEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecce-----------------------------eEEEcCCCEEEEEEEcCC
Confidence 999999999998888888888876554332222 226778999999999999
Q ss_pred CCCceEEEEECCccCCC----------CCCCe---EEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 161 NPVKTISWMKDGKPVPD----------HNEPV---FRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~----------~~~~~---l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
.|.|.+.|++++..+.. ..+.. +.+.++..+|+|.|+|.|.|..|+++.
T Consensus 133 ~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 133 FPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 99999999987654321 12233 344688999999999999999998764
No 71
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.2e-24 Score=155.19 Aligned_cols=171 Identities=22% Similarity=0.384 Sum_probs=127.5
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-EeeEEEEeecccCCCeeEEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-VSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... .....++.. .+++|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT----TISDNRFAMLANNNLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEC-----C----BCCCTTEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred CceeeccC--CCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccce----eccCCeEEEecCCCEEEeeCCHhHCcEEEEE
Confidence 57788777 7889999999999999987 99999643221 111233322 345799999999999999999
Q ss_pred EEcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 87 VNNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 87 ~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
+.+..+.. ...+.+.|..++......... ...+..|+.+.|.|.+.+.|.+
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~---------------------------~~~~~~g~~v~l~C~~~g~p~~ 128 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNVPPAISMPQKSF---------------------------NATAERGEEMTFSCRASGSPEP 128 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECSCCEE---------------------------EEETTSCCCEEEECEEEEESCC
T ss_pred EEEcCCCceEEEEEEEEecCCCCcccccccc---------------------------cccccCCCcEEEEEEEccCCCC
Confidence 99887553 344555555544332222211 2256779999999999999999
Q ss_pred eEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 165 TISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 165 ~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|....+..+.|.
T Consensus 129 ~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 129 AISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999887643 35679999999999999999999999888887777765
No 72
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.92 E-value=1e-24 Score=179.66 Aligned_cols=216 Identities=17% Similarity=0.266 Sum_probs=141.6
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (457)
T 1hzh_H 8 GAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLR 87 (457)
T ss_dssp CCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCC
Confidence 4678999999999999864 99998643321110 11234555532 2489999999
Q ss_pred cCCCeeEEEEEEcCCC------------ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceE
Q psy3045 77 VEDSGKYLCVVNNSVG------------GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQ 144 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 144 (267)
.+|+|.|+|.+.+..+ .......|.|..... ..+.... . +...
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~----------------------~-~~~~ 142 (457)
T 1hzh_H 88 SADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAST--KGPSVFP----------------------L-APSS 142 (457)
T ss_dssp GGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCC--BCCEEEE----------------------E-CCCS
T ss_pred cccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCC--CCCeEEe----------------------c-Cccc
Confidence 9999999999998764 112334555553110 1111110 0 1111
Q ss_pred EEecCCCEEEEeEeCCC-CC-ceEEEEECCccCCC--------CCC-----CeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 145 TIDFGRPAQFTCKYEGN-PV-KTISWMKDGKPVPD--------HNE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~~~~--------~~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
.+.+|+.+.|.|.+.+. |. +.+.|++++..+.. .++ ..|.|..+..+| |.|+|.|.|..+....
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 221 (457)
T 1hzh_H 143 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 221 (457)
T ss_dssp CCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcce
Confidence 35679999999999887 64 79999999865421 111 268888888888 9999999998766444
Q ss_pred EEEEEEecc--------------cCCCee-ecCCceeE-EecCCcEEEEEEeecCCCC----cEEEEECCEEcCC
Q psy3045 210 SGELKLGGR--------------FDPPVI-KESFSDET-LNPGPNYYFKCIASGNPTP----EISWYLDGKKLVN 264 (267)
Q Consensus 210 ~~~l~v~~~--------------~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~p~~----~i~W~~~~~~l~~ 264 (267)
...+.+... ..+|.+ ...+.... +.+|+.+.|.|.+.|.|++ .|.|+|+|+.+..
T Consensus 222 ~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~ 296 (457)
T 1hzh_H 222 DKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN 296 (457)
T ss_dssp EEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECC
T ss_pred eEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccc
Confidence 443332210 124444 33333222 5679999999999998653 9999999988753
No 73
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.92 E-value=3.6e-24 Score=159.32 Aligned_cols=178 Identities=24% Similarity=0.365 Sum_probs=130.8
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
..+.|...+ .+..+.+|+++.|.|.+.+ +.|++++.... .. .+..|.|.+++..|+|.|+|.
T Consensus 17 ~~~~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~------~~-----~~~~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 17 RGSKITVNP--ESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIP------NG-----NTSELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp --CCEEECC--CCEEEETTSBEEEECEETTTTSSEEEEEETTEECT------TC-----CSSEEEETTCCGGGCEEEEEE
T ss_pred CCCEEEECC--CCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECC------CC-----CCCEEEEccCChhhCeEeEEE
Confidence 457888887 7899999999999999988 99999632111 11 245899999999999999999
Q ss_pred EEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 87 VNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 87 ~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
+.+..+.. +..+.|.|...+......... ....++.+...+....+..|+.+.|.|.+.+.|.+.
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~--------------~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~ 149 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDIPESFQRSVDG--------------VSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPH 149 (218)
T ss_dssp EECTTCCEECCCEEEEEECCCGGGCTTCCS--------------BCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCE
T ss_pred EEcCCCCceeeEEEEEEEccCccccccccc--------------ccCCCceEEECCCceeecCCCcEEEEEEecccCCCe
Confidence 99987753 555677776543211000000 000111122234445788999999999999999999
Q ss_pred EEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCC-ceEEEEEEEe
Q psy3045 166 ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELKLG 216 (267)
Q Consensus 166 ~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~ 216 (267)
+.|++++..+.......|.|..+..+|+|.|+|.|.|..+. ....+.|.|.
T Consensus 150 v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 150 YQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp EEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEECCEECCCCCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 99999999998888889999999999999999999998776 3335556654
No 74
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=2.6e-25 Score=175.19 Aligned_cols=228 Identities=14% Similarity=0.223 Sum_probs=137.5
Q ss_pred ccCCCcccCCCCceeEEecCC--CeEEEEEEecc-------eeeeecccCcceecc---ccCCceEEEEeeEEEEeeccc
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGG--ESFALLCEAQE-------NMWFKFIEGSSRKVA---VPLNDRVKQVSGTLIIKEAKV 77 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g--~~v~l~C~~~~-------~~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~ 77 (267)
...+|.+...+ .......| +++.|.|.+.+ +.|++++........ .....+.....+.|.|.....
T Consensus 4 ~~~~P~v~~~~--~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~ 81 (323)
T 2wqr_A 4 DFTPPTVKILQ--SSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHW 81 (323)
T ss_dssp CCCCCCCEEEE--ECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHH
T ss_pred CCCCCEEEEeC--CChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHc
Confidence 34567777665 33333344 69999999865 899996432211100 000011122335688888888
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
.|+|.|+|.+.|..+.....+.+.+. .....+.. ....+....+.+|+.+.|.|.
T Consensus 82 ~d~g~Y~C~a~n~~~~~~~~~~~~~~---~~~~~p~v----------------------~~~~p~~~~v~~G~~v~L~C~ 136 (323)
T 2wqr_A 82 LSDRTYTCQVTYQGHTFEDSTKKCAD---SNPRGVSA----------------------YLSRPSPFDLFIRKSPTITCL 136 (323)
T ss_dssp HTTCCEEEEEEETTEEEEEEECCCCC---SSGGGCEE----------------------EECCCCHHHHHTSSCCEEEEE
T ss_pred CCCCcEEEEEEeCCCCcceeeecCCC---CCCCCCEE----------------------EEcCCCHHHhccCCeEEEEEE
Confidence 89999999999876543322211000 00000100 011122224677999999999
Q ss_pred eCCC-CCc---eEEEEECC-ccCCCC--------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe-cc
Q psy3045 158 YEGN-PVK---TISWMKDG-KPVPDH--------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG-GR 218 (267)
Q Consensus 158 ~~~~-p~~---~~~W~~~~-~~~~~~--------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~-~~ 218 (267)
+.+. |.+ .+.|++++ ..+... + .+.|.|..+..+|+|.|+|.|.|..........+.+. ..
T Consensus 137 ~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~ 216 (323)
T 2wqr_A 137 VVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGP 216 (323)
T ss_dssp EEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSC
T ss_pred EeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCC
Confidence 9876 455 89999965 443321 1 1268899999999999999999986443333333221 12
Q ss_pred cCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcCC
Q psy3045 219 FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 264 (267)
Q Consensus 219 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~~ 264 (267)
..+|.+...+.......|+.+.|.|.+.|. |++ .|.|++||+.|..
T Consensus 217 ~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 264 (323)
T 2wqr_A 217 RAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPD 264 (323)
T ss_dssp CBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred CCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCC
Confidence 246665543322222349999999999984 443 7999999998864
No 75
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=2.6e-23 Score=172.18 Aligned_cols=118 Identities=16% Similarity=0.236 Sum_probs=86.2
Q ss_pred EecCCCEEEEeEeCCCCC---ceEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 146 IDFGRPAQFTCKYEGNPV---KTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~p~---~~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
+.+|+.+.|.|.+.+.++ +.+.| ++..+... ..+.|.|..+..+|.|.|+|.|.|..+...
T Consensus 259 ~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 259 LLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred hccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc
Confidence 467999999999988754 69999 44433211 123588999999999999999999988765
Q ss_pred EEEEEEEecccCCCeeecCCce-eEEecCCcEEEEEEeecCCC--CcEEEEECCEEcCCC
Q psy3045 209 ASGELKLGGRFDPPVIKESFSD-ETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVNA 265 (267)
Q Consensus 209 ~~~~l~v~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~l~~~ 265 (267)
....+.+.....+|.+...+.. ..+.+|+.+.|.|.+.|+++ +.|.|+|||+.|..+
T Consensus 337 ~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 337 LTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred eEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 5555543222356776654433 34678999999999998744 499999999988654
No 76
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=9.4e-25 Score=179.31 Aligned_cols=225 Identities=15% Similarity=0.237 Sum_probs=137.7
Q ss_pred EecCCCeEEEEEEecc-------eeeeecccCcceec-cccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 26 KKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-AVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 26 ~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
.+.+|+.+.|.|.+.+ +.|++++....... ............+.|.|.++...| |.|+|.+.|..+.....
T Consensus 134 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~ 212 (444)
T 1igt_B 134 GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 212 (444)
T ss_dssp SCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE
T ss_pred cCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE
Confidence 3579999999999865 89999743311100 000011222334679999999999 99999999998875443
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEe--ecCCCcccccCCceEE-EecCCCEEEEeEeCCCC----CceEEEEE
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKY--EISPPLAAGVEPTVQT-IDFGRPAQFTCKYEGNP----VKTISWMK 170 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~--~~~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p----~~~~~W~~ 170 (267)
..+.+.......... ..|.. ...++......+.... +.+|+.+.|.|.+.|.+ .+.+.|++
T Consensus 213 ~~i~~~~~~~~~~~~------------~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k 280 (444)
T 1igt_B 213 KKIEPRGPTIKPCPP------------CKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFV 280 (444)
T ss_dssp EECCCCCCSCCCCCC------------CSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEE
T ss_pred EEeccCCCCcccCCc------------cccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEE
Confidence 333221100000000 00000 0001111011111112 47799999999998873 36999999
Q ss_pred CCccCCCCC--------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE-ecccCCCeeecCCceeEEec
Q psy3045 171 DGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL-GGRFDPPVIKESFSDETLNP 235 (267)
Q Consensus 171 ~~~~~~~~~--------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v-~~~~~~p~~~~~~~~~~~~~ 235 (267)
++..+.... .+.|.|..+..+|.|.|+|.|.|..+.......+.+ .....+|.+...+.......
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~ 360 (444)
T 1igt_B 281 NNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMT 360 (444)
T ss_dssp TTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTT
T ss_pred CCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHcc
Confidence 997764321 236889999999999999999999877644444432 12235677665443222223
Q ss_pred CCcEEEEEEeec-CCCC-cEEEEECCEEcC
Q psy3045 236 GPNYYFKCIASG-NPTP-EISWYLDGKKLV 263 (267)
Q Consensus 236 g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~ 263 (267)
+..+.|.|.+.| .|++ .|.|+++|+.+.
T Consensus 361 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 361 KKQVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCeEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 445999999998 4555 899999999874
No 77
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.92 E-value=1.8e-24 Score=159.99 Aligned_cols=183 Identities=28% Similarity=0.429 Sum_probs=124.7
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEee-----EEEEeecccCCCe
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSG-----TLIIKEAKVEDSG 81 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~l~i~~~~~~d~G 81 (267)
.||.|...+ .+..+.+|+++.|.|.+.+ +.|++++.............+....++ .|.|.+++..|+|
T Consensus 8 ~pp~i~~~p--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 8 FPPRIVEHP--SDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp EEEEEEECC--CCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred CCcceecCC--CceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 368888877 7899999999999999986 999996432211111111122222222 3445667899999
Q ss_pred eEEEEEEcCCCcc-EEEEEEEEEeccc-cccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-
Q psy3045 82 KYLCVVNNSVGGE-SVETVLTVTAPLA-AGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY- 158 (267)
Q Consensus 82 ~Y~C~~~~~~~~~-~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~- 158 (267)
.|+|.+.+..+.. +..+.|.|...+. .... +....+..|+.+.|.|.+
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~-----------------------------~~~~~~~~g~~~~l~C~~~ 136 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRDDFRQN-----------------------------PSDVMVAVGEPAVMECQPP 136 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECSSCSBC-----------------------------CCCEEEETTSCEEEECBCC
T ss_pred EEEEEEECCCCceeecceEEEEEeccccceeC-----------------------------CCceEecCCCcEEEEEecC
Confidence 9999999987653 4455666654322 1111 223377889999999998
Q ss_pred CCCCCceEEEEECCccCCCC------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-EEEEEEecccCCCeeecCC
Q psy3045 159 EGNPVKTISWMKDGKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA-SGELKLGGRFDPPVIKESF 228 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~ 228 (267)
.+.|.+.+.|++++..+... ....|.|..+..+|.|.|+|.|.|..|.... .+.|.|. .+|.+...|
T Consensus 137 ~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~---~~P~~~~~P 210 (212)
T 2v9r_A 137 RGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL---ERPSFVKAA 210 (212)
T ss_dssp CEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE---C--------
T ss_pred CCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE---eCchHhhhc
Confidence 78899999999999887643 2368999999999999999999999877554 3667765 466655443
No 78
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.92 E-value=5.4e-24 Score=171.58 Aligned_cols=160 Identities=27% Similarity=0.402 Sum_probs=128.6
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
....+.+|+++.|.|.+.+ +.|++++... +....+....++.|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 213 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~-----~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 287 (384)
T 3kld_A 213 ETVPAEKGTTVKLECFALGNPVPTILWRRADGKP-----IARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAK 287 (384)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEETTCCC-----CCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CceEecCCCcEEEEEEEeecCCCcEEEEeCCCcc-----ccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence 5678899999999999988 9999852211 11122222335689999999999999999999999988888
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCC
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD 177 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~ 177 (267)
..|.|...+.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..
T Consensus 288 ~~l~v~~~P~~~~~~~-----------------------------~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 338 (384)
T 3kld_A 288 GQLTFYAQPNWVQIIN-----------------------------DIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLT 338 (384)
T ss_dssp EEEEEEEEEEEEECCC-----------------------------CEEECTTCCEEEECEEEEESCCEEEEEETTEECCC
T ss_pred EEEEEecCCccccCCC-----------------------------ceEecCCCCEEEEeECCccCCCeEEEEECCEECCC
Confidence 8888877554333222 23788899999999999999999999999988754
Q ss_pred CC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 178 HN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 178 ~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.. ...|.|..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 339 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 339 RDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp BTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 32 4689999999999999999999999998888888774
No 79
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.92 E-value=1.9e-23 Score=156.52 Aligned_cols=180 Identities=23% Similarity=0.360 Sum_probs=131.8
Q ss_pred CCCcccCCCCc--eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCC-ceEEEEeeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVSDI--IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLN-DRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~~~--~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
.+|.|...+.. ....+.+|+++.|.|.+.+ +.|++++.... ...... ......+.+|.|.+++..|+|.|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 91 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFK--QEHRIGGYKVRNQHWSLIMESVVPSDKGNY 91 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECC--GGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCcccc--ccccccceeeecCcceEEEecCCcccCEEE
Confidence 35777554421 5688999999999999987 99999633221 111111 12333445899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
+|.+.+..+.......|.|...+... +......+....+..|+.+.|.|.+.+.|.
T Consensus 92 ~C~~~n~~~~~~~~~~l~V~~~~~~~------------------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 147 (231)
T 3ojm_B 92 TCVVENEYGSINHTYHLDVVERSRHR------------------------PILQAGLPANASTVVGGDVEFVCKVYSDAQ 147 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCC------------------------CEECTTCSCCEEEETTCCEEEECCEECSSC
T ss_pred EEEEecccCcccccEEEEEEcCCCCC------------------------CceeeccCCceEEEeCCcEEEEEEEecCCC
Confidence 99999988887777788877532210 011111123347888999999999999999
Q ss_pred ceEEEEE----CCccCCCC----------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 164 KTISWMK----DGKPVPDH----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 164 ~~~~W~~----~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
+.+.|++ ++..+... ....|.|..+..+|+|.|+|.|.|..|....++.+.|..
T Consensus 148 p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 148 PHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp CEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 9999999 77665322 235799999999999999999999999888888888864
No 80
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=2.2e-24 Score=177.09 Aligned_cols=216 Identities=15% Similarity=0.229 Sum_probs=141.7
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (444)
T 1igt_B 8 GGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLK 87 (444)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCC
Confidence 4678999999999999964 99998643322110 01123455432 3589999999
Q ss_pred cCCCeeEEEEEEcCCCcc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 77 VEDSGKYLCVVNNSVGGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
.+|+|.|+|.+.+..+.. ...+.|.|.... ...+.... ..+. ..+.+|+.+.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~----------------------~~~~-~~~~~g~~v~ 142 (444)
T 1igt_B 88 SEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK--TTAPSVYP----------------------LAPV-CGDTTGSSVT 142 (444)
T ss_dssp GGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC--CBCCEEEE----------------------ECCC-SSCCCSSCEE
T ss_pred HHHCEEEEEEEecCCcccccccCcEEEEecCCC--CCCCceeE----------------------eccc-ccCCCCCcEE
Confidence 999999999999875431 123455554311 01111110 0010 1236799999
Q ss_pred EEeEeCCC-CCc-eEEEEECCccCCC--------CC----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe---
Q psy3045 154 FTCKYEGN-PVK-TISWMKDGKPVPD--------HN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG--- 216 (267)
Q Consensus 154 l~C~~~~~-p~~-~~~W~~~~~~~~~--------~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~--- 216 (267)
|.|.+.+. |.+ .+.|++++..+.. .. .+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 143 L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~ 221 (444)
T 1igt_B 143 LGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT 221 (444)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCS
T ss_pred EEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCC
Confidence 99999885 665 9999998876421 01 1357888888888 99999999998875444444321
Q ss_pred ------------cccCCCee-ecCCceeE-EecCCcEEEEEEeecCC---C-CcEEEEECCEEcCC
Q psy3045 217 ------------GRFDPPVI-KESFSDET-LNPGPNYYFKCIASGNP---T-PEISWYLDGKKLVN 264 (267)
Q Consensus 217 ------------~~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~p---~-~~i~W~~~~~~l~~ 264 (267)
....+|.+ ...+.... +.+|+.+.|.|.+.|.+ + +.|.|+++|..+..
T Consensus 222 ~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~ 287 (444)
T 1igt_B 222 IKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHT 287 (444)
T ss_dssp CCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSS
T ss_pred cccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccC
Confidence 11124554 33333222 57899999999999884 3 59999999988754
No 81
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.92 E-value=2.8e-25 Score=194.09 Aligned_cols=218 Identities=22% Similarity=0.336 Sum_probs=62.7
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCcceecccc------CCceEEEEeeEEEEeecccCCC
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAVP------LNDRVKQVSGTLIIKEAKVEDS 80 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~~------~~~~~~~~~~~l~i~~~~~~d~ 80 (267)
|.+...+. ....+.+|++++|.|.+.+ +.|++++.......... ...........|.|.+++.+|+
T Consensus 224 ~~v~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 302 (772)
T 3v2a_R 224 YDVVLSPS-HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQ 302 (772)
T ss_dssp EEEEEECC-SCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTC
T ss_pred ceeeeCCC-CceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCC
Confidence 34444331 3478999999999999975 89999643321111110 0012233556899999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|.|+|.+.+..+..+..+.|.|...+.....+.. .....+.+|+.+.|.|.+.+
T Consensus 303 G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~--------------------------~~~~~v~~G~~v~l~C~~~~ 356 (772)
T 3v2a_R 303 GLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGM--------------------------ESLVEATVGERVRIPAKYLG 356 (772)
T ss_dssp SEEEEEEECSSCEEEEEEEEEEECCCC-----------------------------------------------------
T ss_pred eEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCC--------------------------CCcEEEcCCCcEEEEEEEee
Confidence 9999999998887778888888775543222110 11226778999999999999
Q ss_pred CCCceEEEEECCccCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecC---CceeEE
Q psy3045 161 NPVKTISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKES---FSDETL 233 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~---~~~~~~ 233 (267)
.|.+.+.|+++|..+... ....|.|..+..+|+|.|+|.|.|..+....+..+.+.+. .+|.+... .....+
T Consensus 357 ~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~-~~P~~~~~~~~~~~~~~ 435 (772)
T 3v2a_R 357 YPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY-VPPQIGEKSLISPVDSY 435 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEe-cCCcccccccCCCcccc
Confidence 999999999999887643 2378999999999999999999998876554444444332 45554322 111247
Q ss_pred ecCCcEEEEEEeecCCCCc-EEEEECC
Q psy3045 234 NPGPNYYFKCIASGNPTPE-ISWYLDG 259 (267)
Q Consensus 234 ~~g~~~~l~C~~~~~p~~~-i~W~~~~ 259 (267)
.+|+.+.|.|.+.|.|.|. +.|+++|
T Consensus 436 ~~g~~~~l~C~~~g~p~p~~v~W~~~~ 462 (772)
T 3v2a_R 436 QYGTTQTLTCTVYAIPPPHHIHWYWQL 462 (772)
T ss_dssp ---------------------------
T ss_pred CCCCcEEEEeEeccCCCCcEEEEEEcC
Confidence 8899999999999999996 9999974
No 82
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.91 E-value=1.2e-23 Score=155.65 Aligned_cols=165 Identities=22% Similarity=0.329 Sum_probs=123.6
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCc--------------ceec-cccCCceEEE-------EeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGS--------------SRKV-AVPLNDRVKQ-------VSGTLI 71 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~--------------~~~~-~~~~~~~~~~-------~~~~l~ 71 (267)
..+.+.+|+++.|.|.+.+ +.|++...+. .... ...+..|+.. .+.+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 6789999999999999874 8999853221 0000 1122344443 246899
Q ss_pred EeecccCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 72 IKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 72 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
|.+++.+|+|.|+|.+.+..+.....+.|.|...+........ ..+..|+.
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-----------------------------~~~~~g~~ 138 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVD-----------------------------GSEEIGND 138 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEE-----------------------------SCCBTTCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeee-----------------------------cceecCCc
Confidence 9999999999999999998887888888888876543222111 14667999
Q ss_pred EEEEeEe-CCCCCceEEEEECCc--cCCC-----CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 152 AQFTCKY-EGNPVKTISWMKDGK--PVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 152 v~l~C~~-~~~p~~~~~W~~~~~--~~~~-----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.|.|.+ .+.|.+.+.|++++. .+.. .....|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 139 v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 139 FKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp EEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EEEEecCCCCCCCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 9999999 788999999999543 3321 245699999999999999999999999888777766654
No 83
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.91 E-value=2.4e-24 Score=158.90 Aligned_cols=168 Identities=25% Similarity=0.429 Sum_probs=126.2
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcce------eccccCCceEEEEeeEEEEeecccCCCe
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSR------KVAVPLNDRVKQVSGTLIIKEAKVEDSG 81 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~G 81 (267)
++.|...+ ..+.+.+|+++.|.|.+.+ +.|++++..... ........++......|.|.+++.+|+|
T Consensus 4 ~~~i~~~~--~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 4 SVTVHSSE--PEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTG 81 (209)
T ss_dssp CCEEECSC--SBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCS
T ss_pred eEEEEcCC--CceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCc
Confidence 45666665 7889999999999999987 999997443110 0112334556656689999999999999
Q ss_pred eEEEEEEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-
Q psy3045 82 KYLCVVNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY- 158 (267)
Q Consensus 82 ~Y~C~~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~- 158 (267)
.|+|.+.+..+. .+..+.|.|..++........ ..+..|+.+.|.|.+
T Consensus 82 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~-----------------------------~~~~~g~~~~l~C~~~ 132 (209)
T 1nbq_A 82 TYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIP-----------------------------SSATIGNRAVLTCSEQ 132 (209)
T ss_dssp EEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCB-----------------------------SEEETTSCEEECCCCC
T ss_pred EEEEEEecCCCCccceEEEEEEEecCCcCCCcccc-----------------------------cceecCCEEEEEEeCC
Confidence 999999988653 345566666655443222111 157789999999996
Q ss_pred CCCCCceEEEEECCccCCCC----------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 159 EGNPVKTISWMKDGKPVPDH----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
.+.|.+.+.|++++..+... ....|.|.++..+|.|.|+|.|.|..|....+.
T Consensus 133 ~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 133 DGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp SCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred CCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccc
Confidence 78899999999999877542 346899999999999999999999998874433
No 84
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.91 E-value=1.8e-24 Score=159.09 Aligned_cols=167 Identities=18% Similarity=0.256 Sum_probs=118.9
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 84 (267)
...|.|...+ ....+.+|++++|.|.+.+ +.|++++... . .....|.|.+++.+|+|.|+
T Consensus 5 ~p~p~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l------~------~~~~~L~i~~v~~~D~G~Y~ 70 (204)
T 3sgj_C 5 LPKAVVFLEP--QWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLI------S------SQASSYFIDAATVDDSGEYR 70 (204)
T ss_dssp -CBCEEEEES--CCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEE------S------CCSSEEEESSCCGGGCEEEE
T ss_pred CCCCeEEEcC--CCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEc------c------cCccEEEEecccccCCEEEE
Confidence 3457777776 5688999999999999987 8999963211 1 11268999999999999999
Q ss_pred EEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC
Q psy3045 85 CVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV 163 (267)
Q Consensus 85 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~ 163 (267)
|.+.+. ..+..+.|.|...+.....+ ...+.+|+.+.|.|.+.+. |.
T Consensus 71 C~a~n~--~~s~~~~l~V~~~p~~~~~~------------------------------~~~v~~G~~v~L~C~~~~~~p~ 118 (204)
T 3sgj_C 71 CQTQLS--TLSDPVQLEVHIGWLLLQAP------------------------------RWVFKEEDPIHLRCHSWKNTAL 118 (204)
T ss_dssp EEETTS--BCCCCEEEEEECSSEEEECS------------------------------CSEEETTCCEEEEEEEGGGCCC
T ss_pred EEeCCC--cccccEEEEEecCceEecCC------------------------------ceeEeCCCcEEEEEEecCCCCC
Confidence 999874 34445566666543211111 1267789999999999765 56
Q ss_pred ceEEEEECCccCCC-CCCCeEEeccCCCCCCeEEEEEEEcCC-CCceEEEEEEEecccCCCe
Q psy3045 164 KTISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQ-ESAQASGELKLGGRFDPPV 223 (267)
Q Consensus 164 ~~~~W~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~~~~~l~v~~~~~~p~ 223 (267)
+.+.|++++..+.. .....|.|.++..+|+|.|+|.|.|.. +.....+.|.|.....+|.
T Consensus 119 ~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 119 HKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp EEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred ceEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 89999999987642 346789999999999999999999943 3344466677765444443
No 85
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=7.7e-24 Score=155.99 Aligned_cols=170 Identities=12% Similarity=0.159 Sum_probs=116.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~ 82 (267)
+|.|... ....+.+|+.+.|.|.+.. +.|++++... ... ...++.. ...+|.|.+++.+|+|.
T Consensus 3 ~p~~~~~---~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l--~~~--~~~~~~~~~~~g~~~L~I~~v~~~D~G~ 75 (207)
T 3rbs_A 3 DPFTKSE---LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEI--FEG--PKYKMHIDRNTGIIEMFMEKLQDEDEGT 75 (207)
T ss_dssp ---CCEE---EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEE--CSS--SSCEEEECTTTCEEEEEESCCCGGGCEE
T ss_pred CCeeecC---CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEEC--ccC--CCEEEEEeCCCCEEEEEECCCChhhCEE
Confidence 4667654 4789999999999999864 9999964321 111 1112221 22379999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccc---------------cCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEe
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAG---------------VEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTID 147 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~---------------~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 147 (267)
|+|.+.| |.......+.+....... ..+... ... ...+.
T Consensus 76 Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-----------------------~~~-~~~v~ 129 (207)
T 3rbs_A 76 YTFQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV-----------------------EYL-SWEVT 129 (207)
T ss_dssp EEEEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEE-----------------------EEE-EEEEE
T ss_pred EEEEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceE-----------------------ecC-CcEEc
Confidence 9999998 444444333322100000 011111 001 23678
Q ss_pred cCCCEEEEeEeCCC-CCceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 148 FGRPAQFTCKYEGN-PVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 148 ~g~~v~l~C~~~~~-p~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
+|+.+.|.|.+.|. |.|.+.|+|++.++..+ ....|.|.++..+|+|.|+|.|.|..|....++.|..
T Consensus 130 ~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 130 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 89999999999998 89999999999887542 1246999999999999999999999998887776653
No 86
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=8.3e-24 Score=157.13 Aligned_cols=172 Identities=27% Similarity=0.426 Sum_probs=124.7
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeE----EEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGT----LIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~----l~i~~~~~~d~G 81 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .......++...++. |.|.+++..|+|
T Consensus 7 ~~~P~i~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 7 YQSPRIIEHP--TDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVS--TNEKKSHRVQFKDGALFFYRTMQGKKEQDGG 82 (217)
T ss_dssp CCCCEEEECC--CCEEECTTSCEEECCEEECSSCCEEEEEETTEECC--CSSSSSSEEECTTSCEEESSCCBSSSCBCCE
T ss_pred cCCCEEecCC--CceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCcc--CCCccceeEEecCCceEEEEEeccCCcccCc
Confidence 4578998887 7899999999999999987 99999633221 111112333322222 368889999999
Q ss_pred eEEEEEEcCCCcc-EEEEEEEEEec-cccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe-
Q psy3045 82 KYLCVVNNSVGGE-SVETVLTVTAP-LAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY- 158 (267)
Q Consensus 82 ~Y~C~~~~~~~~~-~~~~~l~V~~~-~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~- 158 (267)
.|+|.+.+..+.. .....|.|... +..... +....+..|+.+.|.|.+
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~-----------------------------~~~~~~~~g~~v~l~C~~~ 133 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAVLRDDFRVE-----------------------------PKDTRVAKGETALLECGPP 133 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECCSCSBC-----------------------------CCCEEECTTSCEEECCBCC
T ss_pred eEEEEEecCCCccccccceEEEEEeCCCcEEC-----------------------------CCccEEcCCCeEEEEEECC
Confidence 9999999987754 33455555542 222222 222367889999999998
Q ss_pred CCCCCceEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 159 EGNPVKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 159 ~~~p~~~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
.+.|.+.+.|++++..+... ....|.|.++..+|.|.|+|.|.|..|....+..+.+
T Consensus 134 ~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 134 KGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp CEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEE
Confidence 78899999999999877521 2457999999999999999999999987766544444
No 87
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.91 E-value=8.5e-24 Score=151.86 Aligned_cols=161 Identities=18% Similarity=0.254 Sum_probs=117.8
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.. +...+..|.|.+++.+|+|.|
T Consensus 4 ~~~~p~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~------------~~~~~~~L~i~~~~~~d~G~Y 69 (175)
T 1fnl_A 4 DLPKAVVFLEP--QWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESL------------ISSQASSYFIDAATVNDSGEY 69 (175)
T ss_dssp CCCCCEEEEES--CCSEEETTCCEEEEEECCCBTTBCCCEEEETTEE------------EESSCSEEEESSCCGGGCEEE
T ss_pred CCCCCEEEEcC--CceeeeCCCcEEEEeeCCCCCCCcceEEEECCEE------------ccCCceEEEEeCCCcccCEEE
Confidence 34568888877 6678999999999999987 789996321 112356899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
+|.+.+..+ +..+.|.|...+.... .....+.+|+.+.|.|.+.+.++
T Consensus 70 ~C~~~n~~~--s~~~~l~V~~~~~~~~------------------------------~~~~~~~~g~~~~l~C~~~~~~~ 117 (175)
T 1fnl_A 70 RCQTNLSTL--SDPVQLEVHIGWLLLQ------------------------------APRWVFKEEDPIHLRCHSWKNTA 117 (175)
T ss_dssp EEECSSSCC--CCCEEEEEECSSEEEE------------------------------CSCSEEETTCCEEEEEEECTTCC
T ss_pred EEEeeCCcc--cccEEEEEeCCCceee------------------------------CCCceecCCCCEEEEEEcCCCCC
Confidence 999987544 3445566653211000 01126778999999999988765
Q ss_pred -ceEEEEECCccCCCC-CCCeEEeccCCCCCCeEEEEEEEcCCCC-ceEEEEEEEe
Q psy3045 164 -KTISWMKDGKPVPDH-NEPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELKLG 216 (267)
Q Consensus 164 -~~~~W~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~ 216 (267)
+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+. ......|.|.
T Consensus 118 ~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 118 LHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp CEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 599999999887432 4678999999999999999999996543 2234445443
No 88
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.91 E-value=6.5e-23 Score=166.17 Aligned_cols=170 Identities=22% Similarity=0.362 Sum_probs=132.5
Q ss_pred CCcccCCC-CceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 13 APTFSSVS-DIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 13 ~P~~~~~~-~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
+|.|.... ......+.+|+++.|.|.+.+ +.|++++.... ....++...+..|.|.+++.+|+|.|+|.
T Consensus 219 ~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 293 (404)
T 3p3y_A 219 TPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLP-----SDKAKFENFNKALRITNVSEEDSGEYFCL 293 (404)
T ss_dssp CCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCC-----TTTEEEEGGGTEEEESSCCGGGCEEEEEE
T ss_pred CCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECC-----CCcccccccCceEEEccCCHhHCEEEEEE
Confidence 44444332 124678999999999999988 99999643221 11122333456899999999999999999
Q ss_pred EEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 87 VNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
+.|..|.....+.|.|..++.....+. ...+.+|+.+.|.|.+.|.|.+.+
T Consensus 294 a~n~~g~~~~~~~l~V~~~p~~~~~~~-----------------------------~~~v~~g~~~~l~C~~~g~p~p~v 344 (404)
T 3p3y_A 294 ASNKMGSIRHTISVRVKAAPYWLDEPK-----------------------------NLILAPGEDGRLVCRANGNPKPTV 344 (404)
T ss_dssp EECSSCEEEEEEEEEEEEEEEEEECCC-----------------------------CEEECTTCCEEEECEEEEESCCEE
T ss_pred EEeCCCcEEEEEEEEEeCCCeeeccCC-----------------------------cceeecCCcEEEEEEccccCCCce
Confidence 999999888888888887654333322 237888999999999999999999
Q ss_pred EEEECCccCCCCC--------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 167 SWMKDGKPVPDHN--------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 167 ~W~~~~~~~~~~~--------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.|++++..+.... +..|.|.++..+|+|.|+|.|.|..|....++.+.|.
T Consensus 345 ~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 345 QWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 9999998875432 4689999999999999999999999988888887764
No 89
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=2.1e-23 Score=168.56 Aligned_cols=161 Identities=24% Similarity=0.415 Sum_probs=125.6
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCeeEEEEEEcCCCc
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGKYLCVVNNSVGG 93 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 93 (267)
....+.+|+.+.|.|.+.+ +.|++++..... ....++.. ....|.|.+++.+|+|.|+|.+.|..|.
T Consensus 220 ~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 295 (395)
T 1bih_A 220 KDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNG----NPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGK 295 (395)
T ss_dssp CSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCC----CTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSS
T ss_pred CceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCC----CCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCC
Confidence 5678999999999999987 999996432111 11122221 1237999999999999999999999888
Q ss_pred cEE-EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECC
Q psy3045 94 ESV-ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG 172 (267)
Q Consensus 94 ~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~ 172 (267)
... .+.|.|..+|.+...+.. ...+..|+.+.|.|.+.|.|.+.+.|++++
T Consensus 296 ~~~~~~~l~V~~~P~~~~~~~~----------------------------~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g 347 (395)
T 1bih_A 296 PQKHSLKLTVVSAPKYEQKPEK----------------------------VIVVKQGQDVTIPCKVTGLPAPNVVWSHNA 347 (395)
T ss_dssp CEEEEEEEEEEEEEEEEECCCS----------------------------EEEECTTSCEEEECEEEEESCCCCEEEETT
T ss_pred ceEEEEEEEEEcCCccccCCCc----------------------------ceEecCCCeEEEEEEECcccCCeeEEEECC
Confidence 554 888888876554333221 136788999999999999999999999999
Q ss_pred ccCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 173 KPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 173 ~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
..+... ....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 348 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 348 KPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 988643 2358999999999999999999999998887777765
No 90
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.90 E-value=5.2e-23 Score=159.52 Aligned_cols=173 Identities=24% Similarity=0.400 Sum_probs=129.1
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE-EEeeEEEEeecccCCCeeEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK-QVSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~ 84 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++..... ....++. ..++.|.|.+++..|+|.|+
T Consensus 98 ~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 171 (291)
T 1qz1_A 98 FQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL----KKDVRFIVLSNNYLQIRGIKKTDEGTYR 171 (291)
T ss_dssp ECCSEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEETTSCSST----TCCTTEEECTTSCEEETTCCGGGCEEEE
T ss_pred eccccccCCC--CcccccCCCeEEEEEEeccCCCCEEEEEECCEEccc----CCCceEEEccCCcEEEccCccccCeEEE
Confidence 3467777666 6778999999999999987 999996432211 1112222 23458999999999999999
Q ss_pred EEEEcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 85 CVVNNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 85 C~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
|.+.+..+.. ...+.+.|..++........ ....+..|+.+.|.|.+.+.|
T Consensus 172 C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~---------------------------~~~~~~~g~~v~l~C~~~g~p 224 (291)
T 1qz1_A 172 CEGRILARGEINFKDIQVIVNVPPTVQARQSI---------------------------VNATANLGQSVTLVCDADGFP 224 (291)
T ss_dssp EEEEEGGGTEEEEEEEEEEEEEEEEEEESCSE---------------------------EEEETTSCCCEEEEEEEEEES
T ss_pred EEEEecCCCceeeEEEEEEEecCCcccccccc---------------------------cccccccCceEEEEEEEEEeC
Confidence 9999876443 34556666554443222211 122677899999999999999
Q ss_pred CceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 163 VKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 225 ~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 225 EPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp CCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 99999999998876432 4679999999999999999999999988878877775
No 91
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.90 E-value=1.1e-23 Score=151.45 Aligned_cols=159 Identities=22% Similarity=0.275 Sum_probs=117.0
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
.+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ...+..|.|.+++.+|+|.|+|
T Consensus 3 ~~P~i~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~------------~~~~~~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 3 QKPKVSLNP--PWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLS------------EETNSSLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp -CCCCEEES--SCSEEETTCCEEEECCTTCC----CCEEEETTEEC------------SCCSSEEEECSCCGGGCEEEEE
T ss_pred CCCEEEcCC--CCcceecCCcEEEEEeCCCCCCcceEEEEECCeEC------------CCCceEEEEeccceecCEEEEE
Confidence 468888877 6788999999999999987 8899963211 1135689999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC-CCCCc
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE-GNPVK 164 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~ 164 (267)
.+.+..+. ..+.|.|...+.... .....+.+|+.+.|.|.+. +.|.+
T Consensus 69 ~~~~~~~s--~~~~l~V~~~~~~~~------------------------------~~~~~~~~g~~~~l~C~~~~~~p~~ 116 (176)
T 1f2q_A 69 QHQQVNES--EPVYLEVFSDWLLLQ------------------------------ASAEVVMEGQPLFLRCHGWRNWDVY 116 (176)
T ss_dssp ECTTSSCC--CCEEEEEECSSEEEE------------------------------ESCSEEETTSCEEEEEEEGGGCCEE
T ss_pred EcCCcccc--ccEEEEEeCcceeec------------------------------CCcceeeCCCCEEEEEEecCCCCce
Confidence 99876543 344555552211000 0112677899999999995 56778
Q ss_pred eEEEEECCccCCC-CCCCeEEeccCCCCCCeEEEEEEEcCCCC-ceEEEEEEEe
Q psy3045 165 TISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELKLG 216 (267)
Q Consensus 165 ~~~W~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~ 216 (267)
.+.|+++|..+.. .....|.|.++..+|+|.|+|.|.|..+. ....+.+.|.
T Consensus 117 ~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 117 KVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp EEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 9999999988753 35689999999999999999999996433 2234556554
No 92
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.90 E-value=4.4e-23 Score=166.09 Aligned_cols=166 Identities=26% Similarity=0.418 Sum_probs=131.9
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
+|.+..... ....+.+|+++.|.|.+.+ +.|++++.... .+.......|.|.+++.+|+|.|+|.+
T Consensus 206 ~P~~~~~~~-~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~--------~~~~~~~~~L~i~~~~~~d~G~Y~C~a 276 (382)
T 1cs6_A 206 APSIKAKFP-ADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT--------SKWLSSEPLLHIQNVDFEDEGTYECEA 276 (382)
T ss_dssp EEEEEECCC-SEEEEETTCCEEEECEEEEESCCEEEEEECCSCCS--------CCCSBSSSEEEECSCCGGGCEEEEEEE
T ss_pred CCceeccCC-CceEEeCCCeEEEEEEEccCCCCEEEEEECCcccc--------cEEecCCcEEEEccCChhhCEEEEEEE
Confidence 455554321 5788999999999999987 99999643211 122234568999999999999999999
Q ss_pred EcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEE
Q psy3045 88 NNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTIS 167 (267)
Q Consensus 88 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~ 167 (267)
.|..|.......|.|..++.....+. ...+..|+.+.|.|.+.|.|.+.+.
T Consensus 277 ~n~~g~~~~~~~l~V~~~p~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~g~p~p~v~ 327 (382)
T 1cs6_A 277 ENIKGRDTYQGRIIIHAQPDWLDVIT-----------------------------DTEADIGSDLRWSCVASGKPRPAVR 327 (382)
T ss_dssp EETTEEEEEEEEEEEEEEEEEEECCC-----------------------------CEEEETTCCEEEECEEEEESCCEEE
T ss_pred EcCCCeEEEEEEEEEecCCCcccCCC-----------------------------ccEEcCCCeEEEEEEeeeecCCEEE
Confidence 99998888888888886554333322 2367889999999999999999999
Q ss_pred EEECCccCCCCC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 168 WMKDGKPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 168 W~~~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
|+++|..+.... ...|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 328 W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 328 WLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 999999886543 4689999999999999999999999988888887764
No 93
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=2.8e-25 Score=181.90 Aligned_cols=222 Identities=12% Similarity=0.136 Sum_probs=137.6
Q ss_pred EecCCCeEEEEEEecc-------eeeeecccCcceec-cccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 26 KKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-AVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 26 ~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
.+.+|+.++|.|.+.+ +.|++++....... ............+.|.|.++..+| |.|+|.+.|..+.....
T Consensus 130 ~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~ 208 (434)
T 1igy_B 130 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVD 208 (434)
T ss_dssp CCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEE
T ss_pred ccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccce
Confidence 4579999999999965 89999643211100 000011222234679999999889 99999999998875444
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEE-EecCCCEEEEeEeCCCC----CceEEEEECC
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQT-IDFGRPAQFTCKYEGNP----VKTISWMKDG 172 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p----~~~~~W~~~~ 172 (267)
..+.+..... .... |..... +......+.... +.+|+.+.|.|.+.+.+ .+.+.|++++
T Consensus 209 ~~~~~~~~~~-~v~~--------------~~~~~~-p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~ 272 (434)
T 1igy_B 209 KKIVPRDCGC-KPCI--------------CTVPEV-SSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDN 272 (434)
T ss_dssp EECCCCCCCC-CCCC--------------CCCSSS-CCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSS
T ss_pred eeccCCCCCC-cccc--------------CCCCcC-cEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCC
Confidence 3333221000 0000 000000 000011111111 67899999999999884 3589999998
Q ss_pred ccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe-cccCCCeeecCCceeEEecCC
Q psy3045 173 KPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG-GRFDPPVIKESFSDETLNPGP 237 (267)
Q Consensus 173 ~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~ 237 (267)
..+... ..+.|.|..+..+|.|.|+|.|.|..+.......+.+. ....+|.+...+......+|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~ 352 (434)
T 1igy_B 273 VEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKD 352 (434)
T ss_dssp CCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSS
T ss_pred cccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCC
Confidence 776421 12468899889999999999999988765333333221 122466665544333344677
Q ss_pred cEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 238 NYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 238 ~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
.+.|.|.+.|.+++ .|.|+|||+.+..
T Consensus 353 ~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 381 (434)
T 1igy_B 353 KVSLTCMITDFFPEDITVEWQSDGQAPEN 381 (434)
T ss_dssp EEEEEEEEEEEBCSCEEEEEEETTSCCSC
T ss_pred cEEEEEEEEeeECCCeEEEEEECCEecCC
Confidence 89999999986443 8999999988753
No 94
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.90 E-value=2.3e-22 Score=154.11 Aligned_cols=188 Identities=21% Similarity=0.318 Sum_probs=116.1
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEec---c-----eeeeecccCcceec------------cccCCceEEEE------e
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQ---E-----NMWFKFIEGSSRKV------------AVPLNDRVKQV------S 67 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~---~-----~~W~~~~~~~~~~~------------~~~~~~~~~~~------~ 67 (267)
+.+...+ ..+.+.+|+++.|.|.+. + +.|+++........ ...+..|+... +
T Consensus 6 ~~v~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 83 (268)
T 3mj6_A 6 PGLTVSS--PQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHND 83 (268)
T ss_dssp ------C--CEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTB
T ss_pred cccccCC--CceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCE
Confidence 4555555 678999999999999987 3 99999643221110 01122444332 2
Q ss_pred eEEEEeecccCCCeeEEEEEEcCCCccE--EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEE
Q psy3045 68 GTLIIKEAKVEDSGKYLCVVNNSVGGES--VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQT 145 (267)
Q Consensus 68 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 145 (267)
.+|.|.+++.+|+|.|+|.+.+..+... ..+.|.|. +. . +....
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~---~-----------------------------p~~~~ 129 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--PE---E-----------------------------PRDLR 129 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--CC---C-----------------------------CSEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--cc---C-----------------------------CCccc
Confidence 6899999999999999999998765543 33444443 11 1 12237
Q ss_pred EecCCCEEEEeEe---CCCCCceEEEEECCccC-C--------------------------------CCCCCeEEeccCC
Q psy3045 146 IDFGRPAQFTCKY---EGNPVKTISWMKDGKPV-P--------------------------------DHNEPVFRIDSVR 189 (267)
Q Consensus 146 ~~~g~~v~l~C~~---~~~p~~~~~W~~~~~~~-~--------------------------------~~~~~~l~i~~~~ 189 (267)
+.+|+.+.|.|.+ .+.|.+.+.|++++... . ......|.|.++.
T Consensus 130 v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~ 209 (268)
T 3mj6_A 130 VRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVK 209 (268)
T ss_dssp EETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred cccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCC
Confidence 8889999999999 67788999999943211 0 0235689999999
Q ss_pred CCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcE
Q psy3045 190 KEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNY 239 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~ 239 (267)
.+|+|.|+|.|.|..+....++.|.|.. .+|.+...+....+..|+.+
T Consensus 210 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~--~~p~~~~~p~~~~~~~~q~~ 257 (268)
T 3mj6_A 210 ESDQGIYTCSIYVGKLESRKTIVLHVVQ--DEFQRTISPTPPTDKGQQGI 257 (268)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC--C-------------------
T ss_pred hhhCeEEEEEEEcCCceEEEEEEEEEEc--CCCeeeeCCCCCCCCcceec
Confidence 9999999999999888777777777743 66777777766666655544
No 95
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=1.3e-24 Score=177.91 Aligned_cols=215 Identities=15% Similarity=0.237 Sum_probs=140.2
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (434)
T 1igy_B 7 GAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLT 86 (434)
T ss_dssp CCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBC
T ss_pred CCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCC
Confidence 5678999999999999874 99999643322110 01123455432 3479999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.+..+.......|.|..... ..+.... ..+ ...+.+|+.+.|.|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~----------------------~~~-~~~~~~G~~v~L~C 141 (434)
T 1igy_B 87 SDDSAVYYCVREGEVPYWGQGTTVTVSSAKT--TPPSVYP----------------------LAP-GSAAQTNSMVTLGC 141 (434)
T ss_dssp GGGCSEECCCCSSSSCCCCCCEECEECCSCC--BCCCEEE----------------------ECC-CCCCCCTTEEEEEE
T ss_pred hHHCEEEEEEEEccccccCCceEEEEccCCC--CCCeEEE----------------------cCC-ccccCCCCcEEEEE
Confidence 9999999999988543333445566653110 1111110 001 11346799999999
Q ss_pred EeCCC-CCc-eEEEEECCccCCC--------CC----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec-----
Q psy3045 157 KYEGN-PVK-TISWMKDGKPVPD--------HN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG----- 217 (267)
Q Consensus 157 ~~~~~-p~~-~~~W~~~~~~~~~--------~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~----- 217 (267)
.+.+. |.+ .+.|++++..+.. .. .+.|.|..+..+| |.|+|.|.|..+.......+.+..
T Consensus 142 ~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v 220 (434)
T 1igy_B 142 LVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKP 220 (434)
T ss_dssp EEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCC
T ss_pred EEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCcc
Confidence 99886 665 9999999875320 11 1358888888888 999999999988755444443220
Q ss_pred ----ccCCCee-ecCCceeE-EecCCcEEEEEEeecCC----CCcEEEEECCEEcC
Q psy3045 218 ----RFDPPVI-KESFSDET-LNPGPNYYFKCIASGNP----TPEISWYLDGKKLV 263 (267)
Q Consensus 218 ----~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~p----~~~i~W~~~~~~l~ 263 (267)
....|.+ ...+.... +.+|+.+.|.|.+.|.+ .+.|.|+++|..+.
T Consensus 221 ~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~ 276 (434)
T 1igy_B 221 CICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVH 276 (434)
T ss_dssp CCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBC
T ss_pred ccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccC
Confidence 0000333 33332222 78899999999999884 35899999998764
No 96
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=148.77 Aligned_cols=169 Identities=22% Similarity=0.365 Sum_probs=119.0
Q ss_pred eeEEecCCCeEEEEEE-ecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccE
Q psy3045 23 IRFKKPGGESFALLCE-AQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGES 95 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~-~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 95 (267)
..+.+.+|+++.|.|. +.+ +.|++++.... ............+.+|.|.+++.+|+|.|+|.+.+..+...
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 16 PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF--ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCB--CCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred ceEEEECCCCEEEeccccccCCCceEEEEEECCceee--eeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 6889999999999999 444 89999643221 11111111222346899999999999999999998765533
Q ss_pred E---EEEEEEEeccccc-cCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEEC
Q psy3045 96 V---ETVLTVTAPLAAG-VEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKD 171 (267)
Q Consensus 96 ~---~~~l~V~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~ 171 (267)
. ...+.+....... ..+... .......+..|+.+.|.|.+.+.|.+.+.|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~-----------------------~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~ 150 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIV-----------------------VQFKDVYALMGQNVTLECFALGNPVPDIRWRKV 150 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEE-----------------------EECCCEEEETTCCEEEEEEEEEESCCEEEEEET
T ss_pred hhhcccceeeccccccCCCCCceE-----------------------ecCCceEEecCCcEEEEEEccCCCCCceEEEeC
Confidence 2 2222222111100 001000 111234788899999999999999999999999
Q ss_pred CccCCCC-----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 172 GKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 172 ~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+..+... ....|.|.++..+|+|.|+|.|.|..|....+..|.|.
T Consensus 151 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 151 LEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TBCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9887642 45789999999999999999999999888777777764
No 97
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.90 E-value=1.4e-22 Score=151.55 Aligned_cols=163 Identities=18% Similarity=0.210 Sum_probs=108.5
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcce-----------eccccCCceEEE-------EeeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSR-----------KVAVPLNDRVKQ-------VSGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~-----------~~~~~~~~~~~~-------~~~~l~i~~~~ 76 (267)
.++.+.+|++|+|.|.+.+ +.|+|++..... .....+..|+.. .+.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 5688999999999999865 899996432110 011112233322 24689999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.|..+.....+.+.+. +........ ..+.+|+.+.|.|
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~--~~~~~~~~~-----------------------------~~~~~g~~v~l~c 140 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVA--ALGSDLHVD-----------------------------VKGYKDGGIHLEC 140 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE--BCCCCCEEE-----------------------------EEEEETTEEEEEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeec--cceecccce-----------------------------eeeccCCceeeEE
Confidence 999999999999987665544444333 222222211 2667799999999
Q ss_pred EeCC-CCCceEEEEECCcc-CCCC-------CCC---eEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 157 KYEG-NPVKTISWMKDGKP-VPDH-------NEP---VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 157 ~~~~-~p~~~~~W~~~~~~-~~~~-------~~~---~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.+ .|.|.+.|++++.. +... ... .+.+..++.+|.|.|+|.|.|..+....+..+.|.
T Consensus 141 ~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 141 RSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred EeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 9987 48999999996544 3321 111 23344567889999999999999988888877764
No 98
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.90 E-value=6.4e-23 Score=166.97 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=120.4
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceec----cccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKV----AVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVG 92 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 92 (267)
....+.+|+++.|.|.+.+ +.|++++....... ......+......+|.|.+++.+|+|.|+|.|.|.
T Consensus 235 ~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~-- 312 (423)
T 3qs7_E 235 PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-- 312 (423)
T ss_dssp TEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE--
T ss_pred CceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC--
Confidence 4778999999999999986 89999644221110 00012222344568999999999999999999887
Q ss_pred ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECC
Q psy3045 93 GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG 172 (267)
Q Consensus 93 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~ 172 (267)
.+..+.|.|...+.+...+.. ....+.+|+.+.|.|.+.+.|.+.+.|+++|
T Consensus 313 -~~~~~~L~V~~~p~i~~~~~~---------------------------~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g 364 (423)
T 3qs7_E 313 -PSQSALVTIVEKGFINATNSS---------------------------EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364 (423)
T ss_dssp -EEEEEEEEEESSCEEEEC------------------------------CEECCCTTCCCCEEEEEEEESCCEEEEEETT
T ss_pred -CCceEEEEEEeCCcceEcCCC---------------------------ccEEecCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 667777888765443222211 1226778999999999999999999999999
Q ss_pred ccCCCCC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecc
Q psy3045 173 KPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 218 (267)
Q Consensus 173 ~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~ 218 (267)
..+.... ...+.......+|+|.|+|.|.|..|....++.|.+...
T Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~ 415 (423)
T 3qs7_E 365 KSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415 (423)
T ss_dssp EEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----
T ss_pred EECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecC
Confidence 9886543 334444667789999999999999998888888887653
No 99
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.90 E-value=1.3e-22 Score=153.91 Aligned_cols=160 Identities=18% Similarity=0.241 Sum_probs=114.7
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCccee------------------------ccccCCceEEEE---e
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRK------------------------VAVPLNDRVKQV---S 67 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~------------------------~~~~~~~~~~~~---~ 67 (267)
..+.+.+|+++.|.|.+.+ +.|++++...... ....+..|+... +
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 89 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAA 89 (250)
T ss_dssp SEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTS
T ss_pred CceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCc
Confidence 5789999999999999873 9999974322000 001233344332 2
Q ss_pred eEEEEeecccCCCeeEEEEEEcCCCcc-----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCc
Q psy3045 68 GTLIIKEAKVEDSGKYLCVVNNSVGGE-----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPT 142 (267)
Q Consensus 68 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 142 (267)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...+.... .....+.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~-------------------------~~~~~~~ 144 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNN-------------------------VHVSTAE 144 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSC-------------------------CEECCCS
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCe-------------------------EEEecCc
Confidence 589999999999999999999877643 4566777765321100 0011123
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC------------------------------CCCeEEeccCCCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH------------------------------NEPVFRIDSVRKED 192 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~------------------------------~~~~l~i~~~~~~d 192 (267)
...+.+|+.+.|.|.+.+.|.|.+.|++++..+... ....|.|.++..+|
T Consensus 145 ~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 224 (250)
T 2fbo_J 145 VVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITD 224 (250)
T ss_dssp EEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGG
T ss_pred eEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCccc
Confidence 346778999999999999998899999998766431 23689999999999
Q ss_pred CeEEEEEEEcCCCCc
Q psy3045 193 KGMYQCVIRNEQESA 207 (267)
Q Consensus 193 ~g~y~C~~~~~~~~~ 207 (267)
+|.|+|.|.|..|..
T Consensus 225 ~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 225 AGRVWCELATGQGEL 239 (250)
T ss_dssp CEEEEEEEESSSSGG
T ss_pred CEEEEEEecCCcccc
Confidence 999999999966543
No 100
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.90 E-value=2.3e-22 Score=147.73 Aligned_cols=160 Identities=18% Similarity=0.247 Sum_probs=117.2
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCcceeccccCCceEEE-------EeeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKVAVPLNDRVKQ-------VSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+.+|+++.|.|.+.+ +.|++++... .....+... .+.+|.|.+++.+|+|.|+|
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~-----~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDT-----SLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--C-----CCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcc-----cccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 5789999999999999865 7899932111 111222221 34689999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+.+..+.....+.|.|...+. .+... ...+..|+.+.|.|.+.|.|.+.
T Consensus 85 ~~~~~~~~~~~~~~l~V~~~~~---~p~~~---------------------------~~~~~~g~~v~l~C~~~g~P~p~ 134 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVKASYM---RIDTR---------------------------ILEVPGTGEVQLTCQARGYPLAE 134 (202)
T ss_dssp EEEETTEEEEEEEEEEEEBCCC---CEEEE---------------------------EEECTTTCCEEEEEEEEEBSCCE
T ss_pred EEEeCCCcceEEEEEEecCCCC---cccEE---------------------------EEecCCCCeEEEEEEccccCCce
Confidence 9999888777777888775431 11111 01456799999999999999999
Q ss_pred EEEEECCccCCC-------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 166 ISWMKDGKPVPD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 166 ~~W~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
+.|++++..+.. +....+.+..+..+|.|.|+|.|.|..+....+..+.+..
T Consensus 135 v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 135 VSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 999998876532 1124456778889999999999999999888777776653
No 101
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.90 E-value=1.6e-22 Score=146.32 Aligned_cols=157 Identities=19% Similarity=0.248 Sum_probs=116.6
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceEEEE-------eeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRVKQV-------SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~~~~-------~~~l~i~~~~~~d~G~ 82 (267)
+.+.+.+|+++.|.|.+.+ +.|++++....... ......++... ..+|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 4678999999999999877 99999643211100 01123333322 3469999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
|+|.+.+..+ .+.|.|..... +....+.+|+.+.|.|.+.+.|
T Consensus 83 Y~C~~~~~~~----~~~l~V~~~~~---------------------------------~~~~~v~~g~~~~l~C~~~~~p 125 (184)
T 2ny1_B 83 YICEVEDQKE----EVQLLVFGLTA---------------------------------NSDTHLLQGQSLTLTLESPPGS 125 (184)
T ss_dssp EEEEETTEEE----EEEEEEEEEEE---------------------------------SSCSEEETTCCEEEEEECCTTC
T ss_pred EEEEEEcCCC----cEEEEEEEecC---------------------------------CCCceeecCCCEEEEEEcCCCC
Confidence 9999987643 44555543110 1112678899999999999999
Q ss_pred CceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 163 VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
.+.+.|++++..+. .....|.|.++..+|+|.|+|.|.|..+.......+.|..
T Consensus 126 ~~~v~W~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 126 SPSVQCRSPRGKNI-QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp CCEEEEECTTSCEE-EESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEEEeCCCccc-cCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 99999999987653 3568899999999999999999999888777777777764
No 102
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.89 E-value=5.9e-23 Score=150.17 Aligned_cols=159 Identities=15% Similarity=0.172 Sum_probs=105.0
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
.+|.|...| . ..+.+|++|+|.|.+.+ +.|+|++........ .......+..|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 4 SKATLWAEP--G-SVISRGNSVTIRCQGTLEAQEYRLVKEGSPEPWDTQ---NPLEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp CBCEEEEES--C-SEEETTCCEEEEEECCTTCCEEEEEETTCSSCSEEE---CCCSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCC--C-CcccCCCeEEEEEeCCCCCcEEEEEECCCCCCcccc---cccCCccccEEEeccCChhHCeEEEEEE
Confidence 468888776 3 38899999999999988 999996432211000 0011123568999999999999999999
Q ss_pred EcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 88 NNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 88 ~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.|..+.. +..+.|.|..... .+... . .....+.+|+.++|.|.+.+.| +.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~~---~p~i~-----------------------~-~~~~~v~~G~~v~L~C~~~~~p-~~ 129 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGFYN---KPTLS-----------------------A-LPSPVVTSGENVTLQCGSRLRF-DR 129 (196)
T ss_dssp EETTEECBCCCCEEEEEECSSC---CCEEE-----------------------C------------CEEEEEESSCC-SE
T ss_pred eCCCCcCCcCccEEEEecCCCC---CCeEE-----------------------c-cCCccccCCCcEEEEEEcCCCC-CE
Confidence 9876542 4456677765211 01100 0 0112577899999999999988 89
Q ss_pred EEEEECCccCCC-----------CCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 166 ISWMKDGKPVPD-----------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 166 ~~W~~~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
+.|++++..+.. .....|.|.+++.+|+|.|+|.|.|..
T Consensus 130 ~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 130 FILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp EEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred EEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 999999987631 122689999999999999999999865
No 103
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.89 E-value=1.1e-23 Score=173.67 Aligned_cols=232 Identities=19% Similarity=0.301 Sum_probs=135.6
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCccee--ccccCCceEEEEeeEEEEeecccCCCeeE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK--VAVPLNDRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
+|.+...+ ....+.+|+++.|.|.+.+ +.|++++...... .............+.|.|.++..+| |.|
T Consensus 132 ~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y 208 (457)
T 1hzh_H 132 GPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 208 (457)
T ss_dssp CCEEEEEC--CCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCC
T ss_pred CCeEEecC--ccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceE
Confidence 45544333 2334689999999999876 8999964321110 0000111122234579999999999 999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEee-----cCCCcccccCCceE-EEecCCCEEEEeE
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYE-----ISPPLAAGVEPTVQ-TIDFGRPAQFTCK 157 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~-----~~~~~~~~~~~~~~-~~~~g~~v~l~C~ 157 (267)
+|.+.|..+.......+.+..... .+.|.+. ..++......+... .+.+|+.+.|.|.
T Consensus 209 ~C~a~n~~~~~~~~~~v~~~~~~~----------------~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~ 272 (457)
T 1hzh_H 209 ICNVNHKPSNTKVDKKAEPKSCDK----------------THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCV 272 (457)
T ss_dssp EEEEEEGGGTEEEEEECCCCCSCS----------------SCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEE
T ss_pred EEEEEeCCCCcceeEEecccCCCc----------------ccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEE
Confidence 999999766544333333221110 0000000 00011101111111 1567999999999
Q ss_pred eCCCCCc----eEEEEECCccCCCC--------CCCeEEec---cCCCCC---CeEEEEEEEcCCCCceEEEEEEEe-cc
Q psy3045 158 YEGNPVK----TISWMKDGKPVPDH--------NEPVFRID---SVRKED---KGMYQCVIRNEQESAQASGELKLG-GR 218 (267)
Q Consensus 158 ~~~~p~~----~~~W~~~~~~~~~~--------~~~~l~i~---~~~~~d---~g~y~C~~~~~~~~~~~~~~l~v~-~~ 218 (267)
+.+.+++ .+.|++++..+... ....+.+. .+...| .|.|+|.|.|..+.......+.+. ..
T Consensus 273 ~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~ 352 (457)
T 1hzh_H 273 VVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ 352 (457)
T ss_dssp EECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCC
T ss_pred EEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCC
Confidence 9987543 99999999776432 12333332 233445 999999999876554444333320 12
Q ss_pred cCCCeeecCCce-eEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 219 FDPPVIKESFSD-ETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 219 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
..+|.+...+.. ..+..|+ +.|.|.+.|.+++ .|.|++||+.+..
T Consensus 353 ~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 400 (457)
T 1hzh_H 353 PREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENN 400 (457)
T ss_dssp CBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred CCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcc
Confidence 356766654433 2334445 9999999997554 8999999998853
No 104
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.89 E-value=3.2e-22 Score=148.58 Aligned_cols=159 Identities=19% Similarity=0.257 Sum_probs=113.1
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceE--EEEee--EEEEeecccCCCee
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRV--KQVSG--TLIIKEAKVEDSGK 82 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~--~~~~~--~l~i~~~~~~d~G~ 82 (267)
..+|.|...| . ..+.+|++|+|.|.+.+ +.|+|++....... ... ..... .|.|.+++.+|+|.
T Consensus 7 ~~~P~i~~~p--~-~~v~~G~~vtL~C~~~~~~~~~~W~k~g~~~~~~~-----~~~~~~~~~~~~~L~I~~v~~~D~G~ 78 (218)
T 1uct_A 7 FPMPFISAKS--S-PVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREI-----GRRLKFWNETDPEFVIDHMDANKAGR 78 (218)
T ss_dssp SCCCCEEESS--C-SEEETTCCEEEEECCCTTCSEEEEEEEETTEEEEC-----SEECC----CCCEEEECSCCGGGCEE
T ss_pred CCCCEEEecC--C-CccCCCCCEEEEEEcCCCCCEEEEEECCCcccccc-----cccCCCCcceeeEEEEcccccccCEE
Confidence 4568888877 3 47899999999999987 99999743221110 111 12334 89999999999999
Q ss_pred EEEEEEcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 83 YLCVVNNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 83 Y~C~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
|+|.+.+..+.. +..+.|.|..... .+... ..+ ...+.+|+.++|.|...+
T Consensus 79 Y~C~a~n~~~~~~~s~~~~l~V~~~~~---~P~i~-----------------------~~p-~~~v~~G~~v~L~C~~~~ 131 (218)
T 1uct_A 79 YQCQYRIGHYRFRYSDTLELVVTGLYG---KPFLS-----------------------ADR-GLVLMPGENISLTCSSAH 131 (218)
T ss_dssp EEEEEEETTTEEEECCCEEEEEECSSC---CCEEE-----------------------ESS-CSEECTTCCCEEEEECSS
T ss_pred EEEEEEcCCCceeecCCEEEEEcCccc---CCEEE-----------------------eCC-CCccCCCCCEEEEEeCCC
Confidence 999999976532 3345566654211 01000 011 126788999999997667
Q ss_pred CCCceEEEEECCccCCC-----CCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 161 NPVKTISWMKDGKPVPD-----HNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~-----~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
.+.+.+.|+|+|..+.. .....|.|.+++.+|+|.|+|.|.+..
T Consensus 132 ~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 132 IPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp SCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 77889999999987753 346789999999999999999999853
No 105
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.89 E-value=6.9e-23 Score=150.06 Aligned_cols=160 Identities=16% Similarity=0.265 Sum_probs=111.1
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
.+|.|...| . ..+.+|++++|.|.+.+ +.|+|++....... ...........|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~---~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (198)
T 1ugn_A 4 PKPTLWAEP--G-SVITQGSPVTLRCQGGQETQEYRLYREKKTAPWIT---RIPQELVKKGQFPIPSITWEHTGRYRCYY 77 (198)
T ss_dssp CCCEEEEES--C-SEEETTCCEEEEEECCTTCCCEEEEESSSCCHHHH---TSCHHHHTTTEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEeccC--C-CcccCCCcEEEEEEecCCCcEEEEEECCccccccc---cccccCCcccEEEECCCCHHHCeEEEEEE
Confidence 468888766 3 48899999999999988 99999643221000 01111123468999999999999999999
Q ss_pred EcCC-C--ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 88 NNSV-G--GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 88 ~~~~-~--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
.|.. + ..+..+.|.|...+. .+... . .....+.+|+.+.|.|.+.+. .+
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~~~~---~p~i~-----------------------~-~~~~~v~~G~~v~L~C~~~~~-~~ 129 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTGAYI---KPTLS-----------------------A-QPSPVVNSGGNVTLQCDSQVA-FD 129 (198)
T ss_dssp EETTTEECCCCCCEEEEEECSSC---CCEEE-----------------------E-ESCSEEETTCCEEEEEECSSC-CS
T ss_pred ECCCCCcccCCccEEEEEccccc---CCccc-----------------------c-CCccccCCCCcEEEEEecCCC-Cc
Confidence 9876 4 235556777765211 01111 0 011267789999999999888 67
Q ss_pred eEEEEECCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 165 TISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 165 ~~~W~~~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
.+.|++++..+... ....|.|.+++.+|+|.|+|.|.|..+
T Consensus 130 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 130 GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred EEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 99999999876321 237899999999999999999999865
No 106
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.89 E-value=4.6e-22 Score=154.17 Aligned_cols=173 Identities=21% Similarity=0.375 Sum_probs=127.8
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE-EEeeEEEEeecccCCCeeEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK-QVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C 85 (267)
.+|.|...+ ....+.+|+++.|.|.+.+ +.|++++..... ....++. ..+..|.|.+++..|+|.|+|
T Consensus 97 ~~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 170 (291)
T 2wim_A 97 QKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT----ISDNRFAMLANNNLQILNINKSDEGIYRC 170 (291)
T ss_dssp CCCBCCSCC--CSEEEETTSCEEECCCCBCSSCCEEEEECC----CB----CCCSSEEECTTSCEEETTCCGGGCEEEEE
T ss_pred CCcceEeCC--CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccc----cCCceEEEccCCCEEEEecchhhCEEEEE
Confidence 456676666 6778999999999999987 999996432211 1122222 234579999999999999999
Q ss_pred EEEcCCCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 86 VVNNSVGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 86 ~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
.+.+..+.. ...+.+.|..++......... ...+.+|+.+.|.|.+.+.|.
T Consensus 171 ~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~---------------------------~~~~~~g~~~~l~C~~~g~p~ 223 (291)
T 2wim_A 171 EGRVEARGEIDFRDIIVIVNVPPAISMPQKSF---------------------------NATAERGEEMTFSCRASGSPE 223 (291)
T ss_dssp EEEETTTTEEEEEEEEEEEEBCCCCBCSCSEE---------------------------ECCSSSCCEEEEECBCCCBSC
T ss_pred EEEECCCCeeEEeeEEEEeccCCccccCcccc---------------------------cceecCCCeEEEEEEeecCCC
Confidence 999887653 344555665554433322211 125667999999999999999
Q ss_pred ceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 164 KTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 164 ~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|....++.+.+..
T Consensus 224 p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 224 PAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp CEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred CeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 999999999887643 356899999999999999999999999988888887753
No 107
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=1.9e-22 Score=153.10 Aligned_cols=210 Identities=11% Similarity=0.112 Sum_probs=113.8
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
.+|.|...| ...+.+|++|+|.|.+.. +.|+|++.......... .......+..|.|.+++.+|+|.|+|.+
T Consensus 6 ~kP~i~~~P---~~~V~~G~~VtL~C~~~~~~~~~~W~k~g~~~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 81 (257)
T 1b6u_A 6 RKPSLLAHP---GPLVKSEETVILQCWSDVRFQHFLLHREGKFKDTLHLIG-EHHDGVSKANFSIGPMMQDLAGTYRCYG 81 (257)
T ss_dssp CCCEECCBS---CSEEESSCCEEEEEEESSCCSEEEEEEESTTCEEEEEEC-BCCTTCEEEEEEECSCCTTTCEEEEEEE
T ss_pred CCCEEEEcC---CCEecCCCCEEEEEecCCCCcEEEEEECCCCCCcceeee-eccCCCceEEEEeecCCcccCEEEEEeE
Confidence 467887766 367899999999999977 99999744321110000 0001124568999999999999999999
Q ss_pred EcCCC-----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 88 NNSVG-----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 88 ~~~~~-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
.+... ..+..+.|.|.+... .+... ..+. ..+.+|++++|.|.+.+.+
T Consensus 82 ~~~~~~~~~s~~S~~~~L~V~~~~~---~P~l~-----------------------~~p~-~~V~~G~~vtL~C~~~~~~ 134 (257)
T 1b6u_A 82 SVTHSPYQLSAPSDPLDIVITGLYE---KPSLS-----------------------AQPG-PTVLAGESVTLSCSSRSSY 134 (257)
T ss_dssp ECSSCTTSCCCCCCCEEEEEECSSC---CCEEE-----------------------CSSC-TTCBTTCEEEEEEECSSCC
T ss_pred eccCCCccccccCCCEEEecccCCC---CcceE-----------------------ccCC-CccCCCCEEEEEEeCCCCC
Confidence 86432 234556677765211 11110 0011 1467899999999988764
Q ss_pred CceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCC---C--ceEEEEEEEecccCCCeeec-
Q psy3045 163 VKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQE---S--AQASGELKLGGRFDPPVIKE- 226 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~---~--~~~~~~l~v~~~~~~p~~~~- 226 (267)
+.+.|+|+|..+... ....|.|.+++ |+|.|+|.+.+... . ....+.|.|. .+|.+..
T Consensus 135 -~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~---g~p~~~~p 208 (257)
T 1b6u_A 135 -DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVT---GNPSNSWP 208 (257)
T ss_dssp -SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCB---CCC-----
T ss_pred -cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEe---ccCCCCCC
Confidence 689999999776421 25689999998 99999999997532 1 1223444444 3444432
Q ss_pred CCceeEEecCCcEEEEEEeecCCCCcEEEEECC
Q psy3045 227 SFSDETLNPGPNYYFKCIASGNPTPEISWYLDG 259 (267)
Q Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~ 259 (267)
.+.......|..+.|.|.+ |.+.+.|.|..-+
T Consensus 209 ~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 209 SPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp ---------------------------------
T ss_pred CCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 1222235568899999876 6777889997644
No 108
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=7.9e-23 Score=149.49 Aligned_cols=160 Identities=19% Similarity=0.291 Sum_probs=113.8
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
.+|.|...| .. .+.+|++|+|.|.+.+ +.|+|++........... .......|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~i~~~p--~~-~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 4 PKPTLWAEP--GS-VISWGNSVTIWCQGTLEAREYRLDKEESPAPWDRQNPL---EPKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp CCCEEEEES--CS-EEETTCCEEEEEECCTTCCEEEEEETTSCSCSEEECCC---SSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEccC--CC-cCCCCCcEEEEeeCCCCCCEEEEEECCCCCcccccccc---cCCceEEEEeccCCcccCceEEEEE
Confidence 467888777 44 8899999999999988 999996432211110000 0123468999999999999999999
Q ss_pred EcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 88 NNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 88 ~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.|..+. .+..+.|.|..... .+... ..+. ..+.+|+.++|.|.+.+ +++.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~~---~p~~~-----------------------~~~~-~~v~~G~~v~L~C~~~~-~~~~ 129 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGAYS---KPTLS-----------------------ALPS-PLVTSGKSVTLLCQSRS-PMDT 129 (196)
T ss_dssp EETTEEBCCCCCEEEEEECSSC---CCEEE-----------------------EESC-SEECTTCCEEEEEEEEE-EEEE
T ss_pred eCCCcccCCCccEEEEecCCCC---CCEEE-----------------------eCCc-ceecCCCeEEEEEecCC-CCCE
Confidence 998872 35556666654221 11111 0011 15778999999999877 4568
Q ss_pred EEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 166 ISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 166 ~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
+.|++++..+... ....|.|.++..+|+|.|+|.|.|..+
T Consensus 130 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 130 FLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 9999999866422 246799999999999999999999865
No 109
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=8.1e-22 Score=155.84 Aligned_cols=180 Identities=23% Similarity=0.350 Sum_probs=129.1
Q ss_pred CCcccCCCC--ceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEE
Q psy3045 13 APTFSSVSD--IIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 13 ~P~~~~~~~--~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
+|.|..... .....+.+|+++.|.|.+.+ +.|++++......... ..........+|.|.+++..|+|.|+|
T Consensus 119 ~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C 197 (334)
T 1ry7_B 119 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI-GGIKLRHQQWSLVMESVVPSDRGNYTC 197 (334)
T ss_dssp CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSST-TCCCCCTTTTEEEECSCCGGGCCCEEE
T ss_pred CCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccc-cceecccceEEEEECCCCcccCEEEEE
Confidence 565553321 13578899999999999987 9999964322111100 011111234589999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+.|..|.....+.|.|...+.. ++......+....+..|+.+.|.|.+.+.|.+.
T Consensus 198 ~a~n~~g~~~~~~~l~V~~~~~~------------------------~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~ 253 (334)
T 1ry7_B 198 VVENKFGSIRQTYTLDVLERSPH------------------------RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH 253 (334)
T ss_dssp EEEETTEEEEEEEEEEEECCCCS------------------------SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEE
T ss_pred EEEeCCCCEEEEEEEEEecCCCC------------------------CCceEecCCCceEEeCCCCEEEEEEEecCCCCe
Confidence 99999888777788888753210 000011112334788899999999999999999
Q ss_pred EEEEE----CCccCCCCC------------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 166 ISWMK----DGKPVPDHN------------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 166 ~~W~~----~~~~~~~~~------------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
+.|++ +|..+.... ...|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 254 v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 327 (334)
T 1ry7_B 254 IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP 327 (334)
T ss_dssp EEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEEC
T ss_pred EEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEE
Confidence 99999 666553221 13799999999999999999999999988888888864
No 110
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=147.29 Aligned_cols=175 Identities=25% Similarity=0.290 Sum_probs=116.3
Q ss_pred cCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 28 PGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 28 ~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
-.++.+.|.|.+.+ +.|++++.. +....++... ...|.|.+++.+|+|.|+|.+.+..+.....
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~------i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~ 88 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSA------IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT 88 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEE------CCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEE------ccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEE
Confidence 46788888888885 999996322 1122333321 2469999999999999999999987776665
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCC
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD 177 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~ 177 (267)
+.|.|............. .. . -......+......+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 89 ~~l~v~~~~~~~~~~~~~--~~--~----~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 160 (212)
T 2r15_A 89 VDLSGQAYDEAYAEFQRL--KQ--A----AIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQ 160 (212)
T ss_dssp EEECHHHHHHHHHHHHHH--HH--H----HHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECC
T ss_pred EEEEEeeccchhhhcccc--Cc--c----cccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECcc
Confidence 555443210000000000 00 0 000000011111223344788999999999999999999999999988765
Q ss_pred CC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 178 HN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 178 ~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.. ...|.|.++..+|.|.|+|.|.|..|....++.|.|.
T Consensus 161 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 161 TDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp CSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 32 2489999999999999999999999888777777765
No 111
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.89 E-value=1.7e-22 Score=176.60 Aligned_cols=210 Identities=15% Similarity=0.184 Sum_probs=109.5
Q ss_pred eeEEecCC--CeEEEEEEecc----eeeeecccCcceeccccCCc-eEEEEeeEEEEeecccCCCeeEEEEEEcCCCcc-
Q psy3045 23 IRFKKPGG--ESFALLCEAQE----NMWFKFIEGSSRKVAVPLND-RVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGE- 94 (267)
Q Consensus 23 ~~~~v~~g--~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~- 94 (267)
..+.+.+| ++++|.|.+.+ +.|+++..+... ..... ........|.|.+++..|+|.|+|.+.+.....
T Consensus 134 ~~~~v~~G~~~~v~L~C~~~~p~~~v~w~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 210 (772)
T 3v2a_R 134 GVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRF---VPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 210 (772)
T ss_dssp EEEEEESSCCCEEEECCCCSCSSCCEEEEEETTTEEE---CCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEE
T ss_pred eeEEEecCCCCeEEEEccCCCCCcEEEEEecCCCccc---cCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEE
Confidence 56788999 99999999988 999995111111 11111 122234579999999999999999999754322
Q ss_pred EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC--CCceEEEEECC
Q psy3045 95 SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG 172 (267)
Q Consensus 95 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~ 172 (267)
+....+.+...+.. ...+ ..+....+.+|+.+.|.|.+.+. +.+.+.|++++
T Consensus 211 s~~~~~~v~~~~~~-----~v~~---------------------~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~ 264 (772)
T 3v2a_R 211 SIMYIVVVVGYRIY-----DVVL---------------------SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPS 264 (772)
T ss_dssp CCEEEEEEECCCEE-----EEEE---------------------ECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC-
T ss_pred EEEEEEEEecCccc-----eeee---------------------CCCCceEEecCCcEEEEEEEecCCCCceeEEEecCC
Confidence 11123333221110 0000 01122378889999999999874 46789999988
Q ss_pred ccCCCC-----------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCC---ceeE
Q psy3045 173 KPVPDH-----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESF---SDET 232 (267)
Q Consensus 173 ~~~~~~-----------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~---~~~~ 232 (267)
..+... ....|.|.++..+|+|.|+|.+.|..+.......+.|. .+|.+...+ ....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~ 341 (772)
T 3v2a_R 265 SKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH---EKPFVAFGSGMESLVE 341 (772)
T ss_dssp -------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEE---CCCC------------
T ss_pred ccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEe---CCCeeEeccCCCCcEE
Confidence 764321 23469999999999999999999988876667777775 355444332 3456
Q ss_pred EecCCcEEEEEEeecCCCCcEEEEECCEEcCC
Q psy3045 233 LNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 233 ~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~ 264 (267)
+.+|+.+.|.|.+.++|.+.+.|+++|+.+..
T Consensus 342 v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~ 373 (772)
T 3v2a_R 342 ATVGERVRIPAKYLGYPPPEIKWYKNGIPLES 373 (772)
T ss_dssp --------------------------------
T ss_pred EcCCCcEEEEEEEeeeCCCeEEEEECCEeCCC
Confidence 88999999999999999999999999988764
No 112
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.89 E-value=8e-22 Score=146.85 Aligned_cols=164 Identities=17% Similarity=0.329 Sum_probs=112.7
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeeccc-------Cc--ceeccccCCceEEE-------EeeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIE-------GS--SRKVAVPLNDRVKQ-------VSGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~-------~~--~~~~~~~~~~~~~~-------~~~~l~i~~~~ 76 (267)
..+.+.+|+++.|.|.+.+ +.|++++. +. .......+..|... .+.+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 6778999999999999742 89999531 00 00011122344433 23589999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.+ .+.....+.|.|..++... ... ....+..|+.+.|.|
T Consensus 89 ~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~---~~~--------------------------~~~~~~~g~~v~L~C 138 (222)
T 3sbw_C 89 LQDAGVYRCMISY-GGADYKRITVKVNAPYNKI---NQR--------------------------ILVVDPVTSEHELTC 138 (222)
T ss_dssp GGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCC---EEE--------------------------EEEEETTTTEEEEEE
T ss_pred cccCeEEEEEEEe-CCCceeEEEEEEECCCCCC---Cce--------------------------eeeeecCCCcEEEEE
Confidence 9999999999998 5556667778777543311 111 001466799999999
Q ss_pred EeCCCCCceEEEEEC-CccCCCC--------CCCeE---EeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 157 KYEGNPVKTISWMKD-GKPVPDH--------NEPVF---RIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 157 ~~~~~p~~~~~W~~~-~~~~~~~--------~~~~l---~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.|.|.+.+.|+++ +..+... ....+ ....+..+|.|.|+|.|.|..+....+..+.+.
T Consensus 139 ~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 139 QAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred EecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 999999999999998 5544321 11111 222345689999999999999988888888775
No 113
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.89 E-value=4.6e-23 Score=163.93 Aligned_cols=168 Identities=17% Similarity=0.217 Sum_probs=129.3
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCe-eE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSG-KY 83 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y 83 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++....... ........++|.|.+++..|+| .|
T Consensus 155 ~c~~P~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~----~~~~~~~~~~L~i~~v~~~D~G~~Y 228 (347)
T 2ifg_A 155 SCGVPTLKVQV--PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV----MKSGGLPSLGLTLANVTSDLNRKNV 228 (347)
T ss_dssp TCCCCEEEEEC--CSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE----CCCCCSSEEEEEEESCCSTTTTCCE
T ss_pred cCCCCceeccC--CceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc----ccceecccceEEEeeCChHHCCCeE
Confidence 34578888777 6889999999999999977 99999643221111 1112234568999999999999 99
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
+|.+.+..|.....+.|.|..++.+ .. ..+..|+.+.|.|.+.|.|.
T Consensus 229 ~C~a~n~~g~~~~~~~l~V~~~P~i----~~-----------------------------~~~~~g~~v~l~C~~~g~P~ 275 (347)
T 2ifg_A 229 TCWAENDVGRAEVSVQVNVSFPASV----QL-----------------------------HTAVEMHHWCIPFSVDGQPA 275 (347)
T ss_dssp EECCEETTEECCEEECCCCBEEEEE----EE-----------------------------CCCEESSSEEEEEEEEEESC
T ss_pred EEEEEcCCCCEEEEEEEEEcCCCee----ee-----------------------------ccCccCceEEEEEEeeecCC
Confidence 9999999888777777777654442 00 03446899999999999999
Q ss_pred ceEEEEECCccCCCCC----------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 164 KTISWMKDGKPVPDHN----------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 164 ~~~~W~~~~~~~~~~~----------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
|.+.|+++|..+.... ...|.|..++.+|+|.|+|.|.|..|....++.+.|.
T Consensus 276 p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 276 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp CEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred CcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 9999999998876432 2349999999999999999999999887777666654
No 114
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=2.6e-22 Score=145.75 Aligned_cols=159 Identities=16% Similarity=0.200 Sum_probs=112.1
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
.+|.|...| .. .+.+|++|+|.|.+.+ +.|+|++....... ........+..|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~~~p--~~-~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~---~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 3 PKPFIWAEP--HF-MVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDR---PKPPERINKVKFYIPDMNSRMAGQYSCIY 76 (188)
T ss_dssp CCCEEEEES--CS-EEETTCCEEEEEECCTTCCEEEEEETTEEEEEEC---CSSCTTCCEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeec--CC-cCCCCCCEEEEEecCCCCCEEEEEECCCcccccc---cccCCCcceeEEEeCcCCcccCeEEEEEe
Confidence 468888777 34 7999999999999877 89999633211100 01111224568999999999999999999
Q ss_pred EcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 88 NNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 88 ~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+..+. .+..+.|.|..... .+... ..+ ...+.+|+.++|.|.+.+. .+.
T Consensus 77 ~~~~~~~~~s~~~~l~V~~~~~---~p~i~-----------------------~~p-~~~v~~G~~v~L~C~~~~~-~~~ 128 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVTEMYD---TPTLS-----------------------VHP-GPEVISGEKVTFYCRLDTA-TSM 128 (188)
T ss_dssp EETTEECCCCCCEEEEEESCSC---CCEEE-----------------------EES-CSEEETTCEEEEEEECSSS-CSE
T ss_pred cCCCCCCCCCCceEEEecccCC---CCeEE-----------------------ECC-CCccccCCEEEEEEEcCCC-CCE
Confidence 876543 24556666654211 11111 001 1257889999999998764 568
Q ss_pred EEEEECCccCC-----CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 166 ISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 166 ~~W~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
+.|+|++..+. ......|.|.+++.+|+|.|+|.|.|..
T Consensus 129 ~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 129 FLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 99999998764 2456789999999999999999998864
No 115
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.88 E-value=4.5e-22 Score=146.73 Aligned_cols=158 Identities=22% Similarity=0.355 Sum_probs=113.3
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCccee-------------ccccCCceEEE-EeeEEEEeecccCCCeeE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRK-------------VAVPLNDRVKQ-VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~-------------~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y 83 (267)
.+..+.+|+++.|.|...+ +.|+++....... ....+..|... .+++|.|.+++.+|+|.|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVY 86 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEE
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEE
Confidence 4568899999999999766 9999863211110 00112233332 335899999999999999
Q ss_pred EEEEEcCCC-ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 84 LCVVNNSVG-GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 84 ~C~~~~~~~-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
+|.+.+..+ .....+.|.|...+. .+... .... .+..|+.+.|.|.+.+.|
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~---~p~i~-----------------------~~~~--~~~~g~~v~l~C~~~~~p 138 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVT---QPFLQ-----------------------VTNT--TVKELDSVTLTCLSNDIG 138 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCC---CCEEE-----------------------ESCS--SCCTTCCEEEEEECSCTT
T ss_pred EEEEEcccCceeEEEEEEEeccCCC---CCEEe-----------------------cCCc--eEeeCCCEEEEEECCCCC
Confidence 999998853 456666777765322 11111 0111 167799999999998866
Q ss_pred CceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 163 VKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+.+.|++++..+... .+..|.|.++..+|+|.|+|.|.|..|....
T Consensus 139 -p~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 139 -ANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp -CEEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEEC
T ss_pred -CceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccC
Confidence 799999999887643 3478999999999999999999999887543
No 116
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=1.5e-22 Score=144.63 Aligned_cols=149 Identities=19% Similarity=0.249 Sum_probs=109.9
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
.+|.+...+ ....+.+|+++.|.|.+.+ +.|++++... .. ....+.+.+++.+|+|.|+|
T Consensus 3 p~p~i~~~p--~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~------~~------~~~~~~~~~~~~~d~G~Y~C 68 (170)
T 3ry4_A 3 PKAVLKLEP--PWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLI------PT------HTQPSYRFKANNNDSGEYTC 68 (170)
T ss_dssp CBCEEEEES--CCSEEETTCEEEEEEESCCCSSSSCEEEEETTEEC------TT------CCSSEEEEECCGGGCEEEEE
T ss_pred CCCEEEeCC--CCeEEECCCcEEEEEEecCCCCcceEEEEECCeEc------cc------CccceEEEecccccCeEEEE
Confidence 346666666 6678999999999999877 9999963211 11 12346778999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC-CCCCc
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE-GNPVK 164 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~ 164 (267)
.+.+... +..+.|.|...+..... ....+.+|+.+.|.|.+. +.|.+
T Consensus 69 ~~~~~~~--s~~~~l~v~~~~~~~~~------------------------------~~~~~~~g~~~~l~C~~~~~~p~~ 116 (170)
T 3ry4_A 69 QTGQTSL--SDPVHLTVLFEWLVLQT------------------------------PHLEFQEGETIMLRCHSWKDKPLV 116 (170)
T ss_dssp EETTSBC--CCCEEEEEECCSEEEEC------------------------------SCSEECTTCCEEEEEEEGGGCCEE
T ss_pred EEeCCCc--eEeEEEEEECCceEecC------------------------------CCceeecCCeEEEEEECCCCCCCc
Confidence 9986543 33455666543211111 112677899999999995 55678
Q ss_pred eEEEEECCccCCC-CCCCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 165 TISWMKDGKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 165 ~~~W~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+.|++++..+.. .....|.|.++..+|+|.|+|.|.|..+.
T Consensus 117 ~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 117 KVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp EEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred eEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 9999999987643 34678999999999999999999998764
No 117
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=4.7e-22 Score=149.81 Aligned_cols=185 Identities=15% Similarity=0.185 Sum_probs=119.8
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
..+|.|...| .. .+.+|++|+|.|.+.+ +.|+|++....... ........+..|.|.+++.+|+|.|+|.
T Consensus 5 ~~kP~i~~~P--~~-~v~~G~~VtL~C~~~~~~~~~~w~k~g~~~~~~~---~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 78 (242)
T 1p6f_A 5 LPKPFIWAEP--HF-MVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDR---PKPPERINKVKFYIPDMNSRMAGQYSCI 78 (242)
T ss_dssp CCCCEEEEES--CS-EEETTCCEEEEEECCTTCCEEEEEETTEEEEEEC---CSSCTTCCEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEeeC--CC-ccCCCCcEEEEEeeCCCCcEEEEEECCCcccccc---ccccCCcceeEEEecCCCcccCeEEEEE
Confidence 3468888777 34 8999999999999877 89999633211100 0001112456899999999999999999
Q ss_pred EEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 87 VNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 87 ~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
+.+..+. .+..+.|.|.+... .+... ..+ ...+.+|++++|.|.+.+. .+
T Consensus 79 ~~~~~~~s~~S~~~~L~V~~~~~---~P~i~-----------------------~~p-~~~v~~G~~vtL~C~~~~~-~~ 130 (242)
T 1p6f_A 79 YRVGELWSEPSNLLDLVVTEMYD---TPTLS-----------------------VHP-GPEVISGEKVTFYCRLDTA-TS 130 (242)
T ss_dssp EEETTEECCCCCCEEEEEECCSC---CCEEE-----------------------EES-CSEEETTCEEEEEEECTTS-CS
T ss_pred EecCCccccCCcceEEEeecccC---CCceE-----------------------ccC-CCccCCCCcEEEEEecCCC-CC
Confidence 9876442 34556666664211 11111 001 1267889999999998765 45
Q ss_pred eEEEEECCccCC-----CCCCCeEEeccCCCCCCeEEEEEEEcCC---CCceEEEEEEEecccCCCeeecCCc
Q psy3045 165 TISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQ---ESAQASGELKLGGRFDPPVIKESFS 229 (267)
Q Consensus 165 ~~~W~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~~---~~~~~~~~l~v~~~~~~p~~~~~~~ 229 (267)
.+.|+|+|..+. ......|.|.+++.+|+|.|+|.+.+.. ......+.|.|...+..|.+.....
T Consensus 131 ~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~l~~~~~ 203 (242)
T 1p6f_A 131 MFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTSLAPEDP 203 (242)
T ss_dssp EEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------------
T ss_pred EEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCcccCcCC
Confidence 999999998764 3456789999999999999999999864 2334466777777666677766544
No 118
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.88 E-value=2.9e-22 Score=147.05 Aligned_cols=147 Identities=16% Similarity=0.285 Sum_probs=105.4
Q ss_pred eEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE--EEeeEEEEeecccCCCeeEEEEEEcCCCccEE
Q psy3045 24 RFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK--QVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV 96 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (267)
...+.+|+++.|.|.+.+ +.|++..+.. ...+.. ..+..|.|.+++.+|+|.|+|.+.|..+..+.
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~-------~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSP-------LNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCC-------CSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCC-------ccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 345569999999999986 9998842211 111221 13457999999999999999999998877777
Q ss_pred EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC--ceEEEEECCc
Q psy3045 97 ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV--KTISWMKDGK 173 (267)
Q Consensus 97 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~--~~~~W~~~~~ 173 (267)
.+.|.|..++.... .. +. ..+.+|+.++|.|.+.+. |. +.+.|++++.
T Consensus 83 ~~~l~V~~~p~~~~---~~-------------------------~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~ 133 (202)
T 1vca_A 83 GIQVEIYSFPKDPE---IH-------------------------LS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH 133 (202)
T ss_dssp EEEEEEEBCCSCCE---EE-------------------------ES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTE
T ss_pred EEEEEEEeCCCCCE---eC-------------------------Cc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCe
Confidence 88888876543111 00 00 157789999999999876 43 4799999997
Q ss_pred cCCCC-----------C--CCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 174 PVPDH-----------N--EPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 174 ~~~~~-----------~--~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+... . ...|.|.....+|.|.|+|.|.|..+.
T Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 134 LMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp EEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred ECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 65311 0 133567777788899999999998765
No 119
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.9e-22 Score=146.02 Aligned_cols=152 Identities=20% Similarity=0.322 Sum_probs=111.3
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
..+|.|...+ . ..+.+|++++|.|.+.+ +.|++++.. ....+..|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~------------~~~~~~~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 6 LPKPSLQALP--S-SLVPLEKPVTLRCQGPPGVDLYRLEKLSSS------------RYQDQAVLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp BCCCEEEEES--C-SEEETTCCEEEEEECSTTCSEEEEEETTTC------------CEESSSEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEeCC--C-ccccCCCcEEEEEeCCCCCCEEEEEECCcc------------ccCcccEEEECcCChhhCceEEEE
Confidence 3568888776 3 38999999999999887 999996332 123456899999999999999999
Q ss_pred EEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc
Q psy3045 87 VNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK 164 (267)
Q Consensus 87 ~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 164 (267)
+.|..+. .+..+.|.|..... .+... ..+ ...+.+|+.+.|.|.+.+.+ +
T Consensus 71 a~n~~g~~~~s~~~~l~V~~~~~---~p~i~-----------------------~~p-~~~v~~G~~v~l~C~~~~~~-~ 122 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVATGVFA---KPSLS-----------------------AQP-GPAVSSGGDVTLQCQTRYGF-D 122 (184)
T ss_dssp EEETTEEBCCCCCEEEEEESSSC---CCEEE-----------------------EEC-CCSSCCTTCEEEEEECSSCC-C
T ss_pred EEcCCCccCCCCCEEEEecCcCC---CCEEE-----------------------eCC-CceecCCCcEEEEEEcCCCC-c
Confidence 9987653 24455666654211 11111 001 12466799999999987654 6
Q ss_pred eEEEEECCccCCCC-----CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 165 TISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 165 ~~~W~~~~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
.+.|++++..+... ....|.|.+++.+|+|.|+|.|.|...
T Consensus 123 ~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 123 QFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 99999999877532 245688899999999999999999754
No 120
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.88 E-value=4e-22 Score=157.35 Aligned_cols=177 Identities=15% Similarity=0.200 Sum_probs=130.3
Q ss_pred CCCcccCCCCceeEEecCC---CeEEEEEE-ecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGG---ESFALLCE-AQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g---~~v~l~C~-~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 82 (267)
.+|.+..........+.+| +.+.|.|. ..+ +.|+++.++...................|.|..+...|+|.
T Consensus 129 ~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 208 (331)
T 3u83_A 129 AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQS 208 (331)
T ss_dssp BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCE
T ss_pred cCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCE
Confidence 3555533322367788888 88999998 554 99999644433222222233333344679999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP 162 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 162 (267)
|+|.+.|..+..+..+.|.|..++.....+ .....+..|+.+.|.|.+.+.|
T Consensus 209 Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~----------------------------~~~~~~~~g~~~~l~C~~~g~p 260 (331)
T 3u83_A 209 LACIVNYHMDRFKESLTLNVQYEPEVTIEG----------------------------FDGNWYLQRMDVKLTCKADANP 260 (331)
T ss_dssp EEEEEEETTEEEEEEEECCEEEEEEEEEEC----------------------------CCSCCBTTCCCEEEEEEEEEES
T ss_pred EEEEEecCCCcceeeEEEEEecCCeEEEec----------------------------CCCceEeCCCeEEEEEeCcCCC
Confidence 999999998887777888877654322111 1111467799999999999999
Q ss_pred Cce-EEEEECCccCCCC---CCCeEEec-cCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 163 VKT-ISWMKDGKPVPDH---NEPVFRID-SVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 163 ~~~-~~W~~~~~~~~~~---~~~~l~i~-~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+. +.|++++..+... ....|.|. ++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 261 ~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 261 PATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp CCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred CCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEe
Confidence 887 9999999988654 45789999 899999999999999999887777777665
No 121
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=4.7e-21 Score=138.53 Aligned_cols=153 Identities=20% Similarity=0.309 Sum_probs=109.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccE
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGES 95 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 95 (267)
....+.+|+++.|.|.+.+ +.|++++. ........ .....|.|. +.+|+|.|+|.+.+. ..
T Consensus 6 ~~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~--~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~---~~ 73 (184)
T 3b5h_A 6 FTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGV--VLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPE---PM 73 (184)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCEEEEESSSE--EEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEEST---TS
T ss_pred EEEEEecCCCEEEEEECCCCCCCceEEEEEeCCE--Eeeccccc-----CCcEEEEEe--chhhCeEEEEEEECC---cC
Confidence 3557899999999999875 89999532 11111111 113355565 688999999999972 23
Q ss_pred EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC-CceEEEEE---C
Q psy3045 96 VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP-VKTISWMK---D 171 (267)
Q Consensus 96 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~---~ 171 (267)
..+.|.|..+|.....+. ...+.+|+.+.|.|.+.+.| .+.+.|++ +
T Consensus 74 ~~~~l~V~~~P~~~~~~~-----------------------------~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~ 124 (184)
T 3b5h_A 74 GTANIQLHGPPRVKAVKS-----------------------------SEHINEGETAMLVCKSESVPPVTDWAWYKITDS 124 (184)
T ss_dssp CEEEEEECCSCCCEESCS-----------------------------EEEECTTSCEEEEEECCCSSCCCEEEEEECCSS
T ss_pred cEEEEEEecCCceeecCC-----------------------------CcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCC
Confidence 556677765554333332 22678899999999999998 79999999 4
Q ss_pred Ccc-CCCC-----------CCCeEEeccCC-CCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 172 GKP-VPDH-----------NEPVFRIDSVR-KEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 172 ~~~-~~~~-----------~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.. +... ....|.|.++. .+|.|.|+|.|.|..|.......|.|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 125 EDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 443 3221 12479999999 899999999999999988877777764
No 122
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.88 E-value=1.6e-22 Score=145.18 Aligned_cols=155 Identities=14% Similarity=0.116 Sum_probs=110.7
Q ss_pred eeEEecCCCeEEEEE-Eec--c----eeeeecccCcc----eeccccCCceEEE-EeeEEEEeecccCCCeeEEEEEEcC
Q psy3045 23 IRFKKPGGESFALLC-EAQ--E----NMWFKFIEGSS----RKVAVPLNDRVKQ-VSGTLIIKEAKVEDSGKYLCVVNNS 90 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C-~~~--~----~~W~~~~~~~~----~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~ 90 (267)
..+.+.+|++|.|.| .+. . +.|++++.... .........|+.. .+++|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeC
Confidence 457889999999999 333 2 99999642110 0011122344443 3457999999999999999999999
Q ss_pred CCcc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEE
Q psy3045 91 VGGE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISW 168 (267)
Q Consensus 91 ~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W 168 (267)
.|.. ...+.|.|...+. .+. ....+..+.|.|.+.+.|.+.+.|
T Consensus 84 ~g~~~~~~~~~l~V~~~~~---~p~-------------------------------i~~~~~~v~L~C~~~g~p~p~i~W 129 (176)
T 1hng_A 84 NGTRILNKALDLRILEMVS---KPM-------------------------------IYWECSNATLTCEVLEGTDVELKL 129 (176)
T ss_dssp TCCEEEEEEEEEEEECCCC---CCE-------------------------------EEEETTTTEEEEECSSCSSCEEEE
T ss_pred CCCEEEEEEEEEEEeCCCC---CCE-------------------------------EEecCCcEEEEEEecCCCCcEEEE
Confidence 8875 5666777765321 111 112245699999999999999999
Q ss_pred EECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 169 MKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 169 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
++++..+..... +.+..+..+|+|.|+|.|.|..+.......+
T Consensus 130 ~~~g~~l~~~~~--~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 130 YQGKEHLRSLRQ--KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp EETTEEEEEESS--SEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred EECCEECCCCCc--EEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 999988765444 4555777999999999999998876665544
No 123
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.88 E-value=7e-22 Score=154.22 Aligned_cols=169 Identities=22% Similarity=0.343 Sum_probs=118.5
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceE-EEEeeEEEEeecccCCCeeEEEEE
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRV-KQVSGTLIIKEAKVEDSGKYLCVV 87 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~ 87 (267)
|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .. ....++ ...++.|.|.+++..|+|.|+|.+
T Consensus 109 p~i~~~~--~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~--~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 183 (304)
T 2yd9_A 109 PNIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVD--PS-ASNGRIKQLRSGALQIESSEETDQGKYECVA 183 (304)
T ss_dssp CEEEECC--CCEEEETTSCEEECCEEECSSCCEEEEEETTEECC--GG-GGTTSEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred CeeecCC--ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECc--CC-CCcceEEeCCCeEEEEccCCcccCEEEEEEE
Confidence 6777666 6788999999999999987 99999633211 11 011122 223458999999999999999999
Q ss_pred EcCCCccEEE-EEEEEEe---ccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 88 NNSVGGESVE-TVLTVTA---PLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 88 ~~~~~~~~~~-~~l~V~~---~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
.|..|..... ..+.|.. ++.+... +....+.+|+.+.|.|.+.|.|.
T Consensus 184 ~n~~g~~~~~~~~l~v~~~~~~P~~~~~-----------------------------~~~~~v~~G~~v~l~C~~~g~p~ 234 (304)
T 2yd9_A 184 TNSAGVRYSSPANLYVRVQNVAPRFSIL-----------------------------PMSHEIMPGGNVNITCVAVGSPM 234 (304)
T ss_dssp EETTEEEECCCEEEEEECCCEEEEEEEC-----------------------------CCCBCCCTTCCEEEEEEEEEESC
T ss_pred EeCCCCEEeccEEEEEEeeccCCcEEec-----------------------------CCceEEcCCCeEEEEEEEeeeCC
Confidence 9988764322 4455542 1111111 12225778999999999999999
Q ss_pred ceEEEEECCccCCCCC---CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 164 KTISWMKDGKPVPDHN---EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 164 ~~~~W~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.+.|++++..+.... ...+.+.....+|+|.|+|.|.|..|....++.|.|.
T Consensus 235 p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 290 (304)
T 2yd9_A 235 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVK 290 (304)
T ss_dssp CEEEEEETTEECSCSSSCCBSEEEEEECSCCSCEEEEEEEEETTEEEEEEEEEC--
T ss_pred CEEEEEECCEECCCcccccCCcEEEEEcccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 9999999998876432 2333333334469999999999999988888777775
No 124
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.88 E-value=2.3e-21 Score=151.89 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=126.1
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccc-cCCceEEEEeeEEEEeecccCCCeeE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAV-PLNDRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
..+|.+...+ ....+..|+.+.|.|.+.+ +.|++++......... ....+.....+.|.|......|.|.|
T Consensus 115 ~~~P~~~~~~--~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y 192 (313)
T 4fqp_A 115 LAKPQNTAEV--QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNV 192 (313)
T ss_dssp BBCCEEEEEE--CCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEE
T ss_pred ccCCcceecc--cceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeE
Confidence 3456555544 4567788999999998764 9999975433221111 11222223345789999999999999
Q ss_pred EEEEEcCCCccEE--EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 84 LCVVNNSVGGESV--ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 84 ~C~~~~~~~~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
+|.+.|..+.... .+.|.|..+|.+...+ .....+..|+.+.|.|.+.|.
T Consensus 193 ~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~----------------------------~~~~~~~~g~~v~l~C~~~g~ 244 (313)
T 4fqp_A 193 TCKVEHESFEKPQLLTVNLTVYYPPEVSISG----------------------------YDNNWYLGQNEATLTCDARSN 244 (313)
T ss_dssp EEEEECTTSSSCEEEEEECCBCEEEEEEEEC----------------------------CCSCEETTCCCEEEEEEEEEE
T ss_pred EEEEEccCcCccceeeeecccccCCcccccc----------------------------ccceeecCCCeEEEEEEecCC
Confidence 9999998766433 3444444433221111 111255678999999999999
Q ss_pred CCc-eEEEEECCccCCCC---CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCe
Q psy3045 162 PVK-TISWMKDGKPVPDH---NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPV 223 (267)
Q Consensus 162 p~~-~~~W~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~ 223 (267)
|.| .+.|++++..+... .+..|.|.++..+|+|.|+|.|.|..|....++.|.|.. .||.
T Consensus 245 P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~--~PP~ 308 (313)
T 4fqp_A 245 PEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE--GPPH 308 (313)
T ss_dssp SCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC--CC--
T ss_pred CCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe--CCCC
Confidence 987 79999999988653 357899999999999999999999999888887777763 5554
No 125
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.87 E-value=5.6e-22 Score=146.93 Aligned_cols=167 Identities=19% Similarity=0.272 Sum_probs=116.7
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcceecc------------ccCCceEEE-------EeeEEEEeec
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKVA------------VPLNDRVKQ-------VSGTLIIKEA 75 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~------------~~~~~~~~~-------~~~~l~i~~~ 75 (267)
+.+++.+|++++|.|.+.+ +.|+|++.+...... ..+..|+.. .+.+|.|.++
T Consensus 7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 6789999999999999876 789997543322111 111222221 2357999999
Q ss_pred ccCCCeeEEEEEEcCCCccE-EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 76 KVEDSGKYLCVVNNSVGGES-VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 76 ~~~d~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
+.+|+|.|+|.+.+..+... ....+.+...+..... ......+..|+.+.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~ 138 (218)
T 4frw_A 87 VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLN----------------------------PGPALEEGQGLTLAA 138 (218)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEE----------------------------ECSCEETTCCSEEEE
T ss_pred cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceee----------------------------eeeeeeeeeccccce
Confidence 99999999999987666533 3333333322211110 011225667888999
Q ss_pred EeEeCCCCCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 155 TCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 155 ~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
.|.+.+.|.+.+.|++++..+... ..+.|.|..+..+|.|.|+|.|.|..+.......+.|.+
T Consensus 139 ~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 139 SCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp EEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCE
T ss_pred eeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEE
Confidence 999999999999999998776421 124699999999999999999999998887777666654
No 126
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.87 E-value=1.1e-22 Score=150.71 Aligned_cols=160 Identities=17% Similarity=0.342 Sum_probs=109.1
Q ss_pred eEEecCCCeEEEEEEecc-----eeeeecccCcceeccc--------cCCceEEE----EeeEEEEeecccCCCeeEEEE
Q psy3045 24 RFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV--------PLNDRVKQ----VSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~--------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
.+.+.+|++++|.|.+.+ +.|++...+....... ....|+.. .+.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 788999999999999996 9999853322211110 12334432 345799999999999999999
Q ss_pred EEcCCC---ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-C
Q psy3045 87 VNNSVG---GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-P 162 (267)
Q Consensus 87 ~~~~~~---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p 162 (267)
+.+..+ .....+.|.|...+. ..+... ..+....+..|+.+.|.|.+.+. |
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~--~~P~i~-----------------------~~~~~~~~~~g~~v~l~C~~~g~~p 143 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPN--AAPSVT-----------------------LFPPSSEELKTNQATLVCMINGFYP 143 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCC--BCCEEE-----------------------EECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred eccCCcceeEEcCceEEEEeCCCC--CCCeEE-----------------------ccCCCcccccCCcEEEEEEeeceeC
Confidence 999877 234456666663211 111111 00111123369999999999885 4
Q ss_pred C-ceEEEEECCccCCCC--------C------CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 163 V-KTISWMKDGKPVPDH--------N------EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 163 ~-~~~~W~~~~~~~~~~--------~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
+ +.+.|+++|..+... . ...|.|..+..+|.|.|+|.|.|..+...
T Consensus 144 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3mj8_L 144 ADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVE 204 (213)
T ss_dssp SCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEE
T ss_pred CCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEE
Confidence 3 499999999887542 1 13478888889999999999999875443
No 127
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.87 E-value=1.7e-22 Score=146.47 Aligned_cols=163 Identities=21% Similarity=0.290 Sum_probs=105.8
Q ss_pred EecCCCeEEEEEEecc---eeeeecccCcceeccccCCceEEEEeeEEEEee-cccCCCeeEEEEEEcCCCccEEEEEEE
Q psy3045 26 KKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKE-AKVEDSGKYLCVVNNSVGGESVETVLT 101 (267)
Q Consensus 26 ~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 101 (267)
...+|+++.|.|.+.+ +.|+|++... ... .+.+|.|.+ ++.+|+|.|+|.+.|..|.......+.
T Consensus 10 v~~~G~~v~L~C~~~~~~~i~W~k~g~~l------~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDSDENLKWEKNGQEL------PQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCCCTTCEEEETTEEE------CSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCCCCceEEEECCEEC------CCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 4478999999999988 9999963211 110 234799999 999999999999999988765555555
Q ss_pred EEeccccccCCce-EEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCC--C
Q psy3045 102 VTAPLAAGVEPTV-QTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD--H 178 (267)
Q Consensus 102 V~~~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~--~ 178 (267)
|............ ..........+.+ .............+.+|+.+.|.|.+ |.+.+.|+|+|..+.. .
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~ 150 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGS-----QTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA 150 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCC-----SCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC
T ss_pred EecccccccccccccccccCCcccccc-----ccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC
Confidence 4432221111000 0000000000000 00000000001134489999999988 7789999999998863 3
Q ss_pred CCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 179 NEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 179 ~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
....|.|..+..+|+|.|+|.|.|..++.
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 56789999999999999999999987654
No 128
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.87 E-value=2.7e-21 Score=143.22 Aligned_cols=164 Identities=13% Similarity=0.153 Sum_probs=111.4
Q ss_pred eeEEecCC--CeEEEEEEecc----eeeeec-ccCcceeccccCCceEE-EEeeEEEEeecccCCCeeEEEEEEcCCCcc
Q psy3045 23 IRFKKPGG--ESFALLCEAQE----NMWFKF-IEGSSRKVAVPLNDRVK-QVSGTLIIKEAKVEDSGKYLCVVNNSVGGE 94 (267)
Q Consensus 23 ~~~~v~~g--~~v~l~C~~~~----~~W~~~-~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (267)
..+.+.+| +++.|.|.+.+ +.|++. .++.. +....++. .....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~p~~~v~w~~~~~~g~~----~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRF----VPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSSTTCCEEEEEETTTEEE----CCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CE
T ss_pred eEEEEecCCCccEEEeeccCCCCcEEEEEhhcCCCcc----ccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeE
Confidence 68899999 99999999987 999874 11111 11112222 223579999999999999999998843332
Q ss_pred -EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC--CceEEEEEC
Q psy3045 95 -SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP--VKTISWMKD 171 (267)
Q Consensus 95 -~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~ 171 (267)
+..+.|.|..... +... ...+....+.+|+.+.|.|.+.+.| .+.+.|+++
T Consensus 91 ~s~~~~l~v~~~~~----p~~~----------------------~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~ 144 (213)
T 2x1w_L 91 QSIMYIVVVVGYRI----YDVV----------------------LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP 144 (213)
T ss_dssp ECCCEEEEECBCCE----EEEE----------------------EESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECS
T ss_pred EEEEEEEEEeCCcc----cceE----------------------EcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEec
Confidence 2224555532100 0000 0112223788899999999998765 458999998
Q ss_pred CccCCCC-----------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 172 GKPVPDH-----------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 172 ~~~~~~~-----------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+..+... ....|.|.+++.+|+|.|+|.|.|..|....+..|.|.
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 145 SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp CSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence 8764211 12349999999999999999999999988888888876
No 129
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.87 E-value=5e-21 Score=151.10 Aligned_cols=161 Identities=20% Similarity=0.279 Sum_probs=118.6
Q ss_pred eEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcC--CCccE
Q psy3045 24 RFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNS--VGGES 95 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~ 95 (267)
...+.+|+++.|.|.+.+ +.|++++... .....++...+..|.|.+++.+|+|.|+|.+.|. .|...
T Consensus 137 ~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l-----~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~ 211 (329)
T 3oq3_B 137 ELGTHDKYGIDLYCGILYAKHYNNITWYKNNQEL-----IIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKND 211 (329)
T ss_dssp ETTSSTTTCEEEECCCCSCCCCCEEEEEETTEEC-----CCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSC
T ss_pred ceEEeCCCcEEEEeccCCCCCCceEEEEECCccC-----CCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCce
Confidence 445678999999998876 8999963321 1123444445689999999999999999999987 65543
Q ss_pred EE----EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC---Cc-eEE
Q psy3045 96 VE----TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP---VK-TIS 167 (267)
Q Consensus 96 ~~----~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p---~~-~~~ 167 (267)
.. +.|.|...+..... .. .+....+..|+.+.|.|.+.+.| .+ .+.
T Consensus 212 ~~~s~~~~l~V~~~~~~~~~-------------------------~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~ 265 (329)
T 3oq3_B 212 IVVSRCKILTVIPSQDHRFK-------------------------LI-LDPKINVTIGEPANITCTAVSTSLLVDDVLID 265 (329)
T ss_dssp EEEEEEEEEEEECCCCCCEE-------------------------EE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEE
T ss_pred eEEEeeEEEEEECCCCCCCc-------------------------ee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEE
Confidence 33 55666654321100 00 12334788999999999999987 77 899
Q ss_pred EEECCccC-CCCC-------------CCeEEeccCCCCCCe-EEEEEEEcCCCCceEEEEEEE
Q psy3045 168 WMKDGKPV-PDHN-------------EPVFRIDSVRKEDKG-MYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 168 W~~~~~~~-~~~~-------------~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~~~~l~v 215 (267)
|++++..+ ..+. ...|.|.++..+|.| .|+|.|.|..|....+..|.|
T Consensus 266 W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 266 WENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 99999874 2221 356999999999999 999999999998877776665
No 130
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.87 E-value=9.1e-21 Score=148.60 Aligned_cols=176 Identities=17% Similarity=0.282 Sum_probs=123.5
Q ss_pred CCcccCCCCc-eeEEecCCCeEEEEEEe------cc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCC
Q psy3045 13 APTFSSVSDI-IRFKKPGGESFALLCEA------QE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDS 80 (267)
Q Consensus 13 ~P~~~~~~~~-~~~~v~~g~~v~l~C~~------~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 80 (267)
+|.+...+.. ....+.+|+++.|.|.+ .+ +.|++++.... ....++...+..|.|.+++.+|+
T Consensus 100 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~-----~~~~~~~~~~~~L~i~~v~~~d~ 174 (315)
T 1itb_B 100 EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLL-----LDNIHFSGVKDRLIVMNVAEKHR 174 (315)
T ss_dssp CTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECC-----CCSSSEEEETTEEEESSCCGGGC
T ss_pred CCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECC-----CccceEeecCceEEEEeceehhC
Confidence 4555433311 34678999999999998 44 99999633211 12334555667999999999999
Q ss_pred eeEEEEEE-cCCCcc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 81 GKYLCVVN-NSVGGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 81 G~Y~C~~~-~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
|.|+|.+. +..|.. ...+.+.+..... .. +|...........+..|+.+.|.|
T Consensus 175 G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~-~~----------------------~P~~~~~~~~~~~~~~g~~v~l~C 231 (315)
T 1itb_B 175 GNYTCHASYTYLGKQYPITRVIEFITLEENK-PT----------------------RPVIVSPANETMEVDLGSQIQLIC 231 (315)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECCCC-CC----------------------CCEECSCCSEEEECCSSSCEEEEE
T ss_pred cEEEEEEEcCCCCcEEEEEEEEEEEEecCCC-CC----------------------CCEEecCCCCcEEEeCCCcEEEEE
Confidence 99999999 676664 2233333332110 00 111111111123678899999999
Q ss_pred EeCCCCCceEEEEECCccCCCCC---------------------CCeEEeccCCCCC-CeEEEEEEEcCCCCceEEEEEE
Q psy3045 157 KYEGNPVKTISWMKDGKPVPDHN---------------------EPVFRIDSVRKED-KGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 157 ~~~~~p~~~~~W~~~~~~~~~~~---------------------~~~l~i~~~~~~d-~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
.+.+.|.+.+.|+++|..+.... ...|.|.++..+| +|.|+|.|.|..|....++.|.
T Consensus 232 ~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~ 311 (315)
T 1itb_B 232 NVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 311 (315)
T ss_dssp EEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEE
T ss_pred EEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEE
Confidence 99999999999999998886532 1279999999999 9999999999999988888777
Q ss_pred Ee
Q psy3045 215 LG 216 (267)
Q Consensus 215 v~ 216 (267)
+.
T Consensus 312 v~ 313 (315)
T 1itb_B 312 YP 313 (315)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 131
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.87 E-value=2.3e-21 Score=141.26 Aligned_cols=126 Identities=24% Similarity=0.439 Sum_probs=108.0
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.+..+....
T Consensus 12 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 91 (194)
T 2a38_A 12 LQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATS 91 (194)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeE
Confidence 445588899999999999998888999999998876442 347999999999999999999998887777
Q ss_pred EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 210 SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 210 ~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
...+.+.....+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+.
T Consensus 92 ~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 148 (194)
T 2a38_A 92 TAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSL 148 (194)
T ss_dssp EEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSS
T ss_pred EEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCC
Confidence 777888765567777777777789999999999999999999999999999987654
No 132
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.87 E-value=5.2e-21 Score=148.09 Aligned_cols=169 Identities=18% Similarity=0.222 Sum_probs=122.7
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE-EeeEEEEeecccCCCeeEEEEEE
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ-VSGTLIIKEAKVEDSGKYLCVVN 88 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~ 88 (267)
+...+ ....+.+|+++.|.|.+.+ +.|++.+. . ......++.. .+..|.|.+++.+|+|.|+|.+.
T Consensus 92 ~~~~~--~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~-~----~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 164 (289)
T 3ejj_X 92 WNLLA--QEVTVVEGQEAVLPCLITDPALKDSVSLMREGG-R----QVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTM 164 (289)
T ss_dssp EEESC--SEEEEETTSCEEECEEESCGGGGGSEEEEEGGG-E----ECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEE
T ss_pred eeccc--ceEEEecCCceEeEEEccCCCcceEEEEEecCC-e----ecCCCccEEECCCCCEEEeecccccCEEEEEEEE
Confidence 44444 6889999999999999988 89987422 1 1122333332 34579999999999999999999
Q ss_pred c-CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC-CCCceE
Q psy3045 89 N-SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG-NPVKTI 166 (267)
Q Consensus 89 ~-~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~ 166 (267)
+ ..+..+..+.|.|..... ..+... ..+....+.+|+.+.|.|.+.+ .|.+.+
T Consensus 165 ~~~~~~~~~~~~l~V~~~~~--~~p~i~-----------------------~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 219 (289)
T 3ejj_X 165 VNGRESTSTGIWLKVNRVHP--EPPQIK-----------------------LEPSKLVRIRGEAAQIVCSATNAEVGFNV 219 (289)
T ss_dssp ETTEEEECCCEEEEEESSCC--CCCEEE-----------------------EESSSEECCSSSCEEEEEEEEESSSCCEE
T ss_pred eCCCccccccEEEEEEECCC--CCCeEE-----------------------ecCCceEEEeCCcEEEEEEeCCCCCceEE
Confidence 4 333455666777763211 011111 1122335678999999999988 688999
Q ss_pred EEEECCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 167 SWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 167 ~W~~~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.|++++..+... ....|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 220 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 220 ILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp EEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC
T ss_pred EEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEE
Confidence 999999887542 14679999999999999999999999998888887765
No 133
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.86 E-value=3e-21 Score=142.60 Aligned_cols=160 Identities=21% Similarity=0.348 Sum_probs=107.4
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 85 (267)
....+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.+|+|.|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEE
Confidence 6889999999999999987 99999643322100 01122444332 3489999999999999999
Q ss_pred EEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC
Q psy3045 86 VVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV 163 (267)
Q Consensus 86 ~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~ 163 (267)
.+.+..+.. .....|.|..... .+... ...+. ..+..|+.+.|.|.+.|. |.
T Consensus 88 ~~~~~~~~~~~~~~~l~V~~~~~---~P~v~----------------------~~~~~-~~~~~g~~v~l~C~~~g~~p~ 141 (210)
T 1lk3_L 88 QQSWNGPLTFGAGTKLELKRADA---APTVS----------------------IFPPS-TEQLATGGASVVCLMNNFYPR 141 (210)
T ss_dssp EECSSSSCEECCCEEEEECCCCB---CCEEE----------------------EECCC-HHHHTTTEEEEEEEEEEEBSS
T ss_pred EEEcCCCceeCCCEEEEEcCCCc---CCeEE----------------------EECCc-hhhccCCcEEEEEEEEeEeCC
Confidence 999876542 2233555543110 11111 00000 123368999999999874 44
Q ss_pred c-eEEEEECCccCCCC-----------CC-----CeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 164 K-TISWMKDGKPVPDH-----------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 164 ~-~~~W~~~~~~~~~~-----------~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
+ .+.|+++|..+... +. +.|.|..+..+|+|.|+|.|.|......
T Consensus 142 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 142 DISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp CCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred ceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 3 89999999876533 11 2688999999999999999999876443
No 134
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.86 E-value=9.4e-22 Score=145.60 Aligned_cols=163 Identities=21% Similarity=0.315 Sum_probs=109.8
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCccee--------ccccCCceEEEE----eeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRK--------VAVPLNDRVKQV----SGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~--------~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+.+|+++.|.|.+.+ +.|+++..+.... .......++... ..+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEE
Confidence 6789999999999999987 9999864433211 011122344332 3489999999999999999
Q ss_pred EEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC-CCC
Q psy3045 86 VVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG-NPV 163 (267)
Q Consensus 86 ~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~ 163 (267)
.+.+..+.. .....|.|..... .+.... ..+ ......|+.+.|.|.+.+ .|.
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~---~p~v~~----------------------~~~-~~~~~~g~~~~l~C~~~g~~p~ 142 (213)
T 3d9a_L 89 QQSNSWPYTFGGGTKLEIKRADA---APTVSI----------------------FPP-SSEQLTSGGASVVCFLNNFYPK 142 (213)
T ss_dssp EECSSSSCEECCCEEEEECCCCB---CCEEEE----------------------ECC-CHHHHHTTEEEEEEEEEEEBSS
T ss_pred eeecCCcceeCCCEEEEEecCCC---CceeEe----------------------ECC-ChhhcCCCcEEEEEEEeeecCC
Confidence 999876642 2234555543110 111110 000 012336889999999987 455
Q ss_pred c-eEEEEECCccCCCC-----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 164 K-TISWMKDGKPVPDH-----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 164 ~-~~~W~~~~~~~~~~-----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+ .+.|+++|..+... + .+.|.|..+..+|.|.|+|.|.|.........
T Consensus 143 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3d9a_L 143 DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK 207 (213)
T ss_dssp CCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEE
T ss_pred ceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEE
Confidence 4 89999999876543 1 12789999999999999999999876544333
No 135
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.86 E-value=1.8e-21 Score=147.46 Aligned_cols=165 Identities=20% Similarity=0.319 Sum_probs=108.0
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCcceeccc-----------cCCceE-----EEEeeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKVAV-----------PLNDRV-----KQVSGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~~~-----------~~~~~~-----~~~~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|+++.......... ....++ ...+.+|.|.+++
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 11 GTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp SEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC
Confidence 5778999999999999943 8999964332211000 001111 1123469999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.+..+.....+.|.|..++.....+. ..+..|+.+.|.|
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~------------------------------~~~~~~~~~~L~C 140 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD------------------------------QVGMKENEDKYMC 140 (248)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------------------------------------CEEEE
T ss_pred HHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC------------------------------CccccCCCcEEEE
Confidence 9999999999999887777778888876443222211 1344577888999
Q ss_pred EeCC-CCCc-eEEEEECCccCCCC----------------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 157 KYEG-NPVK-TISWMKDGKPVPDH----------------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 157 ~~~~-~p~~-~~~W~~~~~~~~~~----------------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
.+.+ .|.+ .+.|++++..+... + ...|.+.....+|.|.|+|.|.|..+....+..+
T Consensus 141 ~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v 220 (248)
T 3pv7_A 141 ESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNF 220 (248)
T ss_dssp EEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEE
T ss_pred EEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEE
Confidence 9998 6888 99999999754311 1 1357777888889999999999998875555555
Q ss_pred EEec
Q psy3045 214 KLGG 217 (267)
Q Consensus 214 ~v~~ 217 (267)
.+.+
T Consensus 221 ~l~V 224 (248)
T 3pv7_A 221 TLTA 224 (248)
T ss_dssp CC--
T ss_pred EEEE
Confidence 4443
No 136
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.86 E-value=1.3e-21 Score=144.80 Aligned_cols=160 Identities=19% Similarity=0.325 Sum_probs=108.7
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccc--------cCCceEEEE----eeEEEEeecc
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTLIIKEAK 76 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l~i~~~~ 76 (267)
|.+...+ ..+.+.+|++++|.|.+.+ +.|+++..+....... ....|+... +.+|.|.+++
T Consensus 2 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 79 (213)
T 3nl4_L 2 VVMTQTP--ASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLE 79 (213)
T ss_dssp CCEEEEC--SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCC
T ss_pred ccEEeCC--CeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCC
Confidence 4455545 6789999999999999988 9999964322211111 113444332 3479999999
Q ss_pred cCCCeeEEEEEEcCCCc---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 77 VEDSGKYLCVVNNSVGG---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
.+|+|.|+|.+.+..+. ......|.|.... ..+.... .+....+..|+.+.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~---~~p~v~~-----------------------~~~~~~~~~g~~v~ 133 (213)
T 3nl4_L 80 CADAATYYCQSTYENPTYVSFGGGTEVGVKGDP---VAPTVLI-----------------------FPPSADLVATGTVT 133 (213)
T ss_dssp GGGCEEEEEEECCSSTTTCEECCCEEEEEECCC---BCCEEEE-----------------------ECCCHHHHTTSEEE
T ss_pred hHHCEEEEEecCCCCceeEEeCCCeEEEEeCCC---cCCeEEE-----------------------eCCchhhccCCcEe
Confidence 99999999999987663 2333455554311 1111110 01111344689999
Q ss_pred EEeEeCC-CCCceEEEEECCccCCCC----------C------CCeEEeccCCCCCCeEEEEEEE
Q psy3045 154 FTCKYEG-NPVKTISWMKDGKPVPDH----------N------EPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 154 l~C~~~~-~p~~~~~W~~~~~~~~~~----------~------~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
|.|.+.+ .|.+.+.|++++..+... . .+.|.|..+..+|.|.|+|.|.
T Consensus 134 l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 134 IVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 9999988 788999999999877531 1 1357788889999999999999
No 137
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.86 E-value=3e-20 Score=137.57 Aligned_cols=164 Identities=19% Similarity=0.345 Sum_probs=110.7
Q ss_pred eeEEecCCCeEEEEEEec---------c---eeeeecccCcceec-----------cccCCceEEEE------eeEEEEe
Q psy3045 23 IRFKKPGGESFALLCEAQ---------E---NMWFKFIEGSSRKV-----------AVPLNDRVKQV------SGTLIIK 73 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~---------~---~~W~~~~~~~~~~~-----------~~~~~~~~~~~------~~~l~i~ 73 (267)
..+.+.+|++|+|.|.+. . +.|++++.+..... ......|+... +.+|.|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 87 (214)
T 2zg1_A 8 KSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIG 87 (214)
T ss_dssp SEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEEC
T ss_pred cEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEc
Confidence 678999999999999975 2 99999744321100 11223454432 3479999
Q ss_pred ecccCCCeeEEEEEEcCCCcc----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC
Q psy3045 74 EAKVEDSGKYLCVVNNSVGGE----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG 149 (267)
Q Consensus 74 ~~~~~d~G~Y~C~~~~~~~~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g 149 (267)
+++.+|+|.|+|.+.+..+.. ...+.|.|...+. .+... . +. .+.+|
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---~p~i~-----------------------~-~~--~~~~G 138 (214)
T 2zg1_A 88 DARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIE---KPDIH-----------------------F-LE--PLESG 138 (214)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCC---CCEEC--------------------------C--CCCTT
T ss_pred cCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCC---CCcee-----------------------c-Cc--cccCC
Confidence 999999999999999875321 1356677765321 11100 0 00 25679
Q ss_pred CCEEEEeEeCCC----CCceEEEEECCccCCC---CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 150 RPAQFTCKYEGN----PVKTISWMKDGKPVPD---HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 150 ~~v~l~C~~~~~----p~~~~~W~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
+.++|.|.+.+. |.+.+.|++++..... ...+.|.|..+..+|.|.|+|.|.|..+....+..+.+
T Consensus 139 ~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 139 RPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp CCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred CeEEEEEEeccCCCCCCCceEEEeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 999999999874 7889999999876432 34578999999999999999999997654444444443
No 138
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.86 E-value=7.2e-20 Score=152.70 Aligned_cols=216 Identities=17% Similarity=0.252 Sum_probs=134.9
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeec
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEA 75 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~ 75 (267)
..+.+.+|++++|.|.+.+ +.|++...+..... ......|+... +.+|.|.++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 87 (512)
T 1zvo_C 8 GPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSM 87 (512)
T ss_pred CCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcC
Confidence 5789999999999999862 89998643322110 01123455432 368999999
Q ss_pred ccCCCeeEEEEEEcCCC-----------c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCc
Q psy3045 76 KVEDSGKYLCVVNNSVG-----------G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPT 142 (267)
Q Consensus 76 ~~~d~G~Y~C~~~~~~~-----------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 142 (267)
+.+|+|.|+|.+.+..+ . ....+.|.|...+. ..+... ...+.
T Consensus 88 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~--~~P~i~----------------------~~~~~ 143 (512)
T 1zvo_C 88 SAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPT--KAPDVF----------------------PIISG 143 (512)
T ss_pred CHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCC--cCCeEE----------------------eccCC
Confidence 99999999999987642 0 12334566653211 011111 00000
Q ss_pred eEEEecCCCEEEEeEeCCC-CCc-eEEEEECCccCC--------C-CC----CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 143 VQTIDFGRPAQFTCKYEGN-PVK-TISWMKDGKPVP--------D-HN----EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~~~--------~-~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
......|+.+.|.|.+.+. |.+ .+.|++++.... . +. .+.|.|.....+ .|.|+|.|.|..+..
T Consensus 144 ~~~~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~ 222 (512)
T 1zvo_C 144 CRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKS 222 (512)
T ss_pred cccccCCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCc
Confidence 0001236889999999887 654 999999764321 0 01 124777776666 899999999988765
Q ss_pred eEEE-----------EEEEecc-------------------------------------------------cCCCeeec-
Q psy3045 208 QASG-----------ELKLGGR-------------------------------------------------FDPPVIKE- 226 (267)
Q Consensus 208 ~~~~-----------~l~v~~~-------------------------------------------------~~~p~~~~- 226 (267)
.... .+.+.+. ..+|.+..
T Consensus 223 ~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~ 302 (512)
T 1zvo_C 223 KKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLL 302 (512)
T ss_pred eEEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEE
Confidence 5443 2233210 01233322
Q ss_pred CCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcC
Q psy3045 227 SFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLV 263 (267)
Q Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~ 263 (267)
.+....+.+|+.+.|.|.+.|++++ .|.|+++|+.+.
T Consensus 303 ~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 303 TPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPT 341 (512)
T ss_pred CCChHHhccCCceEEEEEEeceECCCeEEEEEECCEecc
Confidence 3333446689999999999987543 899999998865
No 139
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.85 E-value=8e-20 Score=152.44 Aligned_cols=230 Identities=17% Similarity=0.206 Sum_probs=134.5
Q ss_pred CCCeEEEEEEecc-------eeeeecccCccee-cc-ccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEE-
Q psy3045 29 GGESFALLCEAQE-------NMWFKFIEGSSRK-VA-VPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVET- 98 (267)
Q Consensus 29 ~g~~v~l~C~~~~-------~~W~~~~~~~~~~-~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~- 98 (267)
.|+.+.|.|.+.+ +.|+++....... .. .....+.....+.|.|...... .|.|+|.+.|..+......
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~ 227 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIF 227 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEe
Confidence 4689999999987 8999852211100 00 0111122233456888888777 8999999999887654433
Q ss_pred ----------EEEEEeccccccCC-----ceEEEeCC--------------------CceEEEEEeecCCCcccccCCce
Q psy3045 99 ----------VLTVTAPLAAGVEP-----TVQTIDFG--------------------RPAQFTCKYEISPPLAAGVEPTV 143 (267)
Q Consensus 99 ----------~l~V~~~~~~~~~~-----~~~~~~~~--------------------~~~~~~c~~~~~~~~~~~~~~~~ 143 (267)
.+.+..++...... .......| .. .-.|.....+|......+..
T Consensus 228 ~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~p~v~~~~p~~ 306 (512)
T 1zvo_C 228 RWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETK-TPECPSHTQPLGVYLLTPAV 306 (512)
T ss_pred cCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcc-cccCCCCCCCCEEEEECCCh
Confidence 22332222100000 00000000 00 00011011122222333333
Q ss_pred EEEecCCCEEEEeEeCCCCC--ceEEEEECCccCCCC---------CC------CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNPV--KTISWMKDGKPVPDH---------NE------PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~--~~~~W~~~~~~~~~~---------~~------~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
..+..|+.+.|.|.+.++.+ ..++|+++|..+... .. +.|.|.....+|.|.|+|.|.|..+.
T Consensus 307 ~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 307 QDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred HHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 34667999999999998733 499999999775411 11 34888888888999999999998765
Q ss_pred ceEEEEEEEe-cc--cCCCeeecCCceeEEecCCcEE-EEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 207 AQASGELKLG-GR--FDPPVIKESFSDETLNPGPNYY-FKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 207 ~~~~~~l~v~-~~--~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
.. ...+... .. ..+|.+...+... +|+.+. |.|.+.|++++ .+.|+|||+.+..
T Consensus 387 ~~-~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 446 (512)
T 1zvo_C 387 PQ-RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNT 446 (512)
T ss_pred CC-ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcC
Confidence 43 2222221 11 1356655443322 789999 99999996554 6899999998864
No 140
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.85 E-value=4.8e-21 Score=148.47 Aligned_cols=173 Identities=17% Similarity=0.234 Sum_probs=119.9
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-EeeEEEEeecccCCCe-eEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-VSGTLIIKEAKVEDSG-KYL 84 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G-~Y~ 84 (267)
.+|.+...+ ....+.+|+++.|.|.+.+ +.|++. ++.. +....++.. .+..|.|.+++.+|+| .|+
T Consensus 90 ~~~~~~~~~--~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~-~g~~----l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~ 162 (290)
T 2o26_X 90 DPAKLFLVG--LPLFGKEDSDALVRCPLTDPQVSQYSLIEC-DGKS----LPTDLTFVPNPKAGITIKNVKRAYHRLCVR 162 (290)
T ss_dssp CSSCCBCCC--CCEEEETTSCEEECCCBSCCSCEEEEEEET-TSCC----CCTTCEEEEETTTEEEEESCCGGGTTCEEE
T ss_pred CCCcccccc--cceEEecCCeEEEeCcCCCCCCceEEEEeC-CCcC----CCCCCceeeCCCCCEEEecccHHHCCCEEE
Confidence 345444444 6788899999999999876 899542 1211 122333332 2358999999999999 999
Q ss_pred EEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC
Q psy3045 85 CVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV 163 (267)
Q Consensus 85 C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 163 (267)
|.+.|..+.. +..+.|.|..... ..+. +...+....+.+|+.+.|.|.+.+.|.
T Consensus 163 C~a~n~~~~~~s~~~~l~V~~~~~--~~P~-----------------------i~~~~~~~~v~~G~~v~l~C~~~g~p~ 217 (290)
T 2o26_X 163 CAAQRDGTWLHSDKFTLKVREAIK--AIPV-----------------------VSVPETSHLLKKGDTFTVVCTIKDVST 217 (290)
T ss_dssp EEEEETTEEEECCCEEEEEECCCC--SCCE-----------------------EECSCSBCCCCTTCCEEEEEEEEESST
T ss_pred EEEEECCceEEeEEEEEEEEeCCC--CCCc-----------------------cccCCCcceEecCCcEEEEEEEecCCc
Confidence 9999974442 3346666653110 0111 111122236788999999999999988
Q ss_pred ce-EEEEECCccC----CC------------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 164 KT-ISWMKDGKPV----PD------------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 164 ~~-~~W~~~~~~~----~~------------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+. +.|++++..+ .. .....|.|.++..+|+|.|+|.|.|..|....+..|.|.
T Consensus 218 p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 218 SVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp TCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred ceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEE
Confidence 85 9999999873 21 124679999999999999999999999988777666654
No 141
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.85 E-value=4.7e-21 Score=139.62 Aligned_cols=156 Identities=17% Similarity=0.217 Sum_probs=106.7
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcce-ec-----------cccCCceEEE-EeeEEEEeecccCCCeeE
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSR-KV-----------AVPLNDRVKQ-VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~-~~-----------~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y 83 (267)
..+.+.+|++|+|.|.+.+ +.|++++..... .. ...+..|+.. .+++|.|.+++.+|+|.|
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEE
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceE
Confidence 6889999999999999864 899996321100 00 0011234433 356899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCC-CEEEEeEeCCC-
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGR-PAQFTCKYEGN- 161 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~-~v~l~C~~~~~- 161 (267)
+|.+.+..+.....+.|.|...+.. +... . .. .....|. .+.|.|.+.+.
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~---p~i~-~----------------------~~--~~~~~g~~~v~L~C~~~g~~ 137 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRN---IQVT-N----------------------HS--QLFQNMTCELHLTCSVEDAD 137 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEE---EEEE-E----------------------CC--C---CSSEEEEEEEEEESCC
T ss_pred EEEEEecCCCeEEEEEEEEEccCCC---CeEe-c----------------------Cc--eeecCCCceEEEEEEEecCC
Confidence 9999998877666777777653221 1000 0 00 0123355 79999999985
Q ss_pred CCceEEEEECCccCCCCCCCeEEeccCCCC-CCeEEEEEEEcCCCCce
Q psy3045 162 PVKTISWMKDGKPVPDHNEPVFRIDSVRKE-DKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~~~~~~~~~~ 208 (267)
|.+.+.|++++..+.. ...|.|.....+ |.|.|+|.|.|..+...
T Consensus 138 p~p~i~W~~~g~~l~~--~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s 183 (193)
T 2if7_A 138 DNVSFRWEALGNTLSS--QPNLTVSWDPRISSEQDYTCIAENAVSNLS 183 (193)
T ss_dssp TTCEEEEEETTEEEES--SSEEEEEECTTTCSCCEEEEEEEETTEEEE
T ss_pred CceEEEEEeCCEEcCC--CCeEEEEeccCcCCCCcEEEEEECCCCccc
Confidence 5789999999987643 456777655554 89999999999987654
No 142
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.85 E-value=3.3e-21 Score=150.80 Aligned_cols=170 Identities=14% Similarity=0.174 Sum_probs=117.9
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEec-c-----eeeeecccCcceeccccCCceEEEE------eeEEEEeecccCCC
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQ-E-----NMWFKFIEGSSRKVAVPLNDRVKQV------SGTLIIKEAKVEDS 80 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~-~-----~~W~~~~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~ 80 (267)
+|.+...+. ....+.+|+++.|.|.+. + +.|++++... ....++... ...|.|.+++.+|+
T Consensus 106 ~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 178 (312)
T 2y23_A 106 FPTVPVKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEI------FEGPKYKMHIDRNTGIIEMFMEKLQDEDE 178 (312)
T ss_dssp SCBCCEEEE-EEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEE------CSSSSCEEEEETTTTEEEEEESCCCGGGC
T ss_pred CCccccccC-CceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEEC------eeCCcEEEEEccCCCEEEEEEccCCcccC
Confidence 565555441 388999999999999998 4 9999963321 111222211 23599999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccc--------------c-ccCCceEEEeCCCceEEEEEeecCCCcccccCCceEE
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLA--------------A-GVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQT 145 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~--------------~-~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 145 (267)
|.|+|.+.+.. ......+.+..... . ...+... .+....
T Consensus 179 G~Y~C~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------------------------~~~~~~ 232 (312)
T 2y23_A 179 GTYTFQLQDGK--ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV------------------------EYLSWE 232 (312)
T ss_dssp EEEEEEEESSS--CEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEE------------------------EEEEEE
T ss_pred EeEEEEEEeCC--ceEEEEEEEcchhhhhhcccccccccchhhccCCcee------------------------ecceEE
Confidence 99999997643 33333333321000 0 0011110 001136
Q ss_pred EecCCCEEEEeEeCCCCCc-eEEEEECCccCCC-------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 146 IDFGRPAQFTCKYEGNPVK-TISWMKDGKPVPD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~p~~-~~~W~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
+.+|+.+.|.|.+.+.|.+ .+.|++++..+.. .....|.|.++..+|+|.|+|.|.|..|....++.|.+
T Consensus 233 v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 233 VTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred EeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 7889999999999999877 9999999987752 12368999999999999999999999998888777654
No 143
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.85 E-value=5.4e-20 Score=139.28 Aligned_cols=168 Identities=18% Similarity=0.242 Sum_probs=108.1
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCccee-------------ccccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK-------------VAVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~-------------~~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++++|.|.+.+ +.|+++..+.... .......|+... ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 4688999999999999875 8999964332111 011123455432 2479999999
Q ss_pred cCCCeeEEEEEEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 77 VEDSGKYLCVVNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
.+|+|.|+|.+.+..+. ....+.|.|...+...... . +. ....+..+...+....+.+|+++.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~---------~--~~---~~~~~~~~~~~~~~~~v~~G~~v~L 155 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGG---------G--SG---GGGSETTLTQSPATLSLSPGERATL 155 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC--------------------------CCCCEEEECSEEEECTTSCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEeccccccccc---------c--cC---CCCcceEEEccCCEEEecCCCcEEE
Confidence 99999999999987322 1223455555432100000 0 00 0001111222344557889999999
Q ss_pred EeEeCCCCCceEEEEE--CCccCC---------------------CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 155 TCKYEGNPVKTISWMK--DGKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 155 ~C~~~~~p~~~~~W~~--~~~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
.|.+.+.+.+.+.|++ ++..+. ......|.|.++..+|+|.|+|.|.+..
T Consensus 156 ~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 156 SCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp EEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred EEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 9999999888999999 554431 1123469999999999999999998753
No 144
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.85 E-value=2.8e-20 Score=141.55 Aligned_cols=153 Identities=20% Similarity=0.350 Sum_probs=106.5
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++|+|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT 87 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC
Confidence 5678999999999999864 99999643322110 01123455433 3589999999
Q ss_pred cCCCeeEEEEEEcCCCc---c--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 77 VEDSGKYLCVVNNSVGG---E--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
.+|+|.|+|.+.+..+. . ...+.|.|...+.+.. .+....+.+|++
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~-----------------------------~p~~~~v~~G~~ 138 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQ-----------------------------TPLSLPVSLGDQ 138 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEE-----------------------------ECSEEEECTTCC
T ss_pred hhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEe-----------------------------cCcEEEEecCCc
Confidence 99999999999987652 1 1234555543221111 123347889999
Q ss_pred EEEEeEeCCCCCc-----eEEEEE--CCccCC-------------C--------CCCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 152 AQFTCKYEGNPVK-----TISWMK--DGKPVP-------------D--------HNEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 152 v~l~C~~~~~p~~-----~~~W~~--~~~~~~-------------~--------~~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
++|.|.+.+.|.+ .+.|+| ++..+. . .....|.|.++..+|+|.|+|.+.+.
T Consensus 139 v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 218 (256)
T 1nqb_A 139 ASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSH 218 (256)
T ss_dssp EEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred EEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 9999999988764 999999 555431 0 12346999999999999999999875
Q ss_pred C
Q psy3045 204 Q 204 (267)
Q Consensus 204 ~ 204 (267)
.
T Consensus 219 ~ 219 (256)
T 1nqb_A 219 V 219 (256)
T ss_dssp S
T ss_pred C
Confidence 3
No 145
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.85 E-value=1.6e-20 Score=137.79 Aligned_cols=156 Identities=13% Similarity=0.177 Sum_probs=108.1
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceE--EEEeeEEEEeecccCCCeeEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRV--KQVSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C 85 (267)
.+|.|...| . ..+.+|++|+|.|.+.+ +.|+|++....... ...+. ...+..|.|.+++.+|+|.|+|
T Consensus 7 ~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~---~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 7 RKPSLLAHP--G-PLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLR---LIGEHHDGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp CCCEEEEES--C-SEEETTCCEEEEEEESSCCSEEEEEEESSSCEEEE---EECEEETTEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEEc--C-CccCCCCcEEEEEeccCCCCEEEEEECCCcCCcce---eeeecCCCCceEEEEeccCCcccCeEEEE
Confidence 467787766 3 67899999999999976 99999743221110 00111 1245689999999999999999
Q ss_pred EEEcCCC-----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 86 VVNNSVG-----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 86 ~~~~~~~-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
.+.+... ..+..+.|.|..... .+... ..+. ..+.+|+.++|.|.+.+
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~~---~p~i~-----------------------~~p~-~~v~~G~~v~L~C~~~~ 133 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLYE---KPSLS-----------------------AQPG-PTVLAGENVTLSCSSRS 133 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSSC---CCEEE-----------------------EESC-SEECTTCEEEEEEEESS
T ss_pred eEecCCCCccccCCCCCEEEEeeccCC---CCcee-----------------------cCCC-CccCCCCeEEEEEeCCC
Confidence 9986431 234556677765321 11111 0011 26788999999999886
Q ss_pred CCCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 161 NPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 161 ~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
+.+.+.|+|+|..+... ....|.|.+++ |+|.|+|.|.+.
T Consensus 134 -~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 134 -SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp -CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred -CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 56789999999877531 14678999898 999999999865
No 146
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=2.3e-20 Score=136.14 Aligned_cols=126 Identities=24% Similarity=0.443 Sum_probs=104.7
Q ss_pred cccCCceEEEecCCCEEEEeEeC-CCCCceEEEEECCccCCCCC------------------CCeEEeccCCCCCCeEEE
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYE-GNPVKTISWMKDGKPVPDHN------------------EPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~~~~~~------------------~~~l~i~~~~~~d~g~y~ 197 (267)
+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ...|.|.++..+|+|.|+
T Consensus 5 ~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 84 (195)
T 2c5d_C 5 FVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQ 84 (195)
T ss_dssp EEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEE
T ss_pred eccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEE
Confidence 33445666899999999999998 88989999999998876441 357999999999999999
Q ss_pred EEEEcCCCCceE-EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcCCC
Q psy3045 198 CVIRNEQESAQA-SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 198 C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~~~ 265 (267)
|.+.+..+.... ...+.|. .+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+++|..+...
T Consensus 85 C~~~~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 151 (195)
T 2c5d_C 85 CLVFLGHQTFVSQPGYVGLE---GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATA 151 (195)
T ss_dssp EEEEETTEEEECCCEEEEEC---CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSS
T ss_pred EEEEeCCCceecccEEEEEe---cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCC
Confidence 999997655433 3566664 56888777777889999999999999999999 99999999988754
No 147
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.85 E-value=5.1e-20 Score=136.20 Aligned_cols=125 Identities=30% Similarity=0.487 Sum_probs=102.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC----------CCCeEEeccC-CCCCCeEEEEEEEcCCCCceE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSV-RKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++ ..+|+|.|+|.+.|..+....
T Consensus 13 p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~ 92 (212)
T 2yd6_A 13 PVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISV 92 (212)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEE
T ss_pred cceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEE
Confidence 44557889999999999999899999999999887643 2356999999 599999999999999887777
Q ss_pred EEEEEEeccc----CCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 210 SGELKLGGRF----DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 210 ~~~l~v~~~~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
...+.|.... ..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+
T Consensus 93 ~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~ 152 (212)
T 2yd6_A 93 STRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTS 152 (212)
T ss_dssp EEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC---
T ss_pred EEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCc
Confidence 7777776421 2367777777778899999999999999999999999999988653
No 148
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.85 E-value=3.9e-21 Score=142.27 Aligned_cols=167 Identities=17% Similarity=0.291 Sum_probs=108.6
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceecc--------ccCCceEEE----EeeEEEEeecc
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVA--------VPLNDRVKQ----VSGTLIIKEAK 76 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~--------~~~~~~~~~----~~~~l~i~~~~ 76 (267)
|.+...+ ..+.+.+|++++|.|.+.+ +.|++...+...... .....|+.. .+.+|.|.+++
T Consensus 2 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 79 (213)
T 3r06_A 2 IQMTQSP--SSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLE 79 (213)
T ss_dssp CCEEEEC--SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred CeeEeCC--CEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCC
Confidence 4455445 6889999999999999988 999985332211100 112334433 23489999999
Q ss_pred cCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+..+. ......|.|.... ..+... ..+....+..|+.+.|.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---~~p~v~-----------------------~~~~~~~~~~~~~v~l~ 133 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEIKRAD---AKPTVS-----------------------IFPPSSEQLGTGSATLV 133 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEECCCC---BCCEEE-----------------------EECCCHHHHTTTEEEEE
T ss_pred cccCEEEEEecccCCceEEcCCceEEEeccC---CCceee-----------------------eeCCCceecCCCCcEEE
Confidence 99999999999887543 2333455552211 111111 00111133457789999
Q ss_pred eEeCCCCC--ceEEEEECCccCCCC----------CC------CeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 156 CKYEGNPV--KTISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 156 C~~~~~p~--~~~~W~~~~~~~~~~----------~~------~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
|.+.+.++ +.+.|+++|..+... .. +.|.+.....+|.|.|+|.|.|......
T Consensus 134 C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 134 CFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred EEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 99987643 499999999877532 11 2466777777889999999999875443
No 149
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.85 E-value=1.1e-19 Score=134.33 Aligned_cols=131 Identities=30% Similarity=0.502 Sum_probs=106.9
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-----------CCCeEEeccCCC-CCCeEEEEEEEc
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRK-EDKGMYQCVIRN 202 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-----------~~~~l~i~~~~~-~d~g~y~C~~~~ 202 (267)
+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++.. +|+|.|+|.+.|
T Consensus 7 P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n 86 (212)
T 2yd1_A 7 PEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAEN 86 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEEC
T ss_pred CEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEe
Confidence 33444556668999999999999999998999999999887522 115799999999 999999999999
Q ss_pred CCCC-ceEEEEEEEeccc----CCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 203 EQES-AQASGELKLGGRF----DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 203 ~~~~-~~~~~~l~v~~~~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
..+. ......+.|.... .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+
T Consensus 87 ~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~ 154 (212)
T 2yd1_A 87 GVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMS 154 (212)
T ss_dssp SSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTT
T ss_pred CCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccC
Confidence 8887 5667777776421 1267777777778899999999999999999999999999998753
No 150
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.85 E-value=7e-21 Score=148.82 Aligned_cols=165 Identities=13% Similarity=0.225 Sum_probs=118.1
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEE
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV 96 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (267)
.......|+.+.|.|.+.. +.|++++........ ..........+.|.|..+...|.|.|+|.+.|..+....
T Consensus 122 ~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~-~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 200 (308)
T 4fom_A 122 DSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTT-SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDI 200 (308)
T ss_dssp SCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE-ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred ceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccc-eeeeecccccccceEEeeeecCCccEEEEEEccCCCCce
Confidence 4566778999999998643 999997443322111 122223334567999999999999999999998776443
Q ss_pred --EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc-eEEEEECCc
Q psy3045 97 --ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK-TISWMKDGK 173 (267)
Q Consensus 97 --~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~~~~~ 173 (267)
.+.|.|..+|.+...+. ....+..|+.+.|.|.+.|.|.| .+.|+|++.
T Consensus 201 ~~~~~l~V~~~P~~~~~~~----------------------------~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~ 252 (308)
T 4fom_A 201 RYSFILDIQYAPEVSVTGY----------------------------DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDG 252 (308)
T ss_dssp EEEEECCCCEEEEECCBCC----------------------------CSCEETTCCSCEEECCEEEESCEEEEECCBSSS
T ss_pred EEeEEEEEecCCeeEEccc----------------------------ceeeeeccccEEEEEEEecCCCCcEEEEEECCe
Confidence 44444544433222211 11256678999999999999877 799999998
Q ss_pred cCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 174 PVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 174 ~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+... +...+.|..++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 253 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 253 QWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp CCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred ECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 77543 34456678899999999999999999988878777776
No 151
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.85 E-value=1.2e-19 Score=138.12 Aligned_cols=180 Identities=14% Similarity=0.216 Sum_probs=110.8
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccc---------cCCceEEE------EeeEEEEe
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV---------PLNDRVKQ------VSGTLIIK 73 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~---------~~~~~~~~------~~~~l~i~ 73 (267)
..+...+ ..+.+.+|++|+|.|.+.+ +.|++...+....... ....|+.. ...+|.|.
T Consensus 4 ~~v~q~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPD--ARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKA 81 (256)
T ss_dssp CEEECSC--SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEES
T ss_pred cEEEecC--ceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEEC
Confidence 3455555 6889999999999999977 9999853322211111 11233332 23579999
Q ss_pred ecccCCCeeEEEEEEcCCCcc----EEEEEEEEEeccccc-cCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 74 EAKVEDSGKYLCVVNNSVGGE----SVETVLTVTAPLAAG-VEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 74 ~~~~~d~G~Y~C~~~~~~~~~----~~~~~l~V~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
+++.+|+|.|+|.+.+..+.. ...+.|.|....... ...... ........+..+...+....+.+
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~----------~~~~~~~~~~~v~~~p~~~~v~~ 151 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGG----------GGSGGGGSEAAVTQSPRNKVTVT 151 (256)
T ss_dssp SCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC-------------------------------CCEEESCSEEEEET
T ss_pred CCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCc----------ccCCCCcCccEEEecCCEEEEeC
Confidence 999999999999999876532 123455555310000 000000 00000001122223345557789
Q ss_pred CCCEEEEeEeCCCCCceEEEEECCc--cC-------------------------CCCCCCeEEeccCCCCCCeEEEEEEE
Q psy3045 149 GRPAQFTCKYEGNPVKTISWMKDGK--PV-------------------------PDHNEPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 149 g~~v~l~C~~~~~p~~~~~W~~~~~--~~-------------------------~~~~~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
|++++|.|.+.+. .+.+.|+++.. .+ .......|.|.++..+|+|.|.|.|.
T Consensus 152 G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 230 (256)
T 3tf7_C 152 GENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASS 230 (256)
T ss_dssp TCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEec
Confidence 9999999999876 67899998431 10 01234579999999999999999999
Q ss_pred cCCCC
Q psy3045 202 NEQES 206 (267)
Q Consensus 202 ~~~~~ 206 (267)
|..+.
T Consensus 231 n~~g~ 235 (256)
T 3tf7_C 231 DAPGQ 235 (256)
T ss_dssp EETTE
T ss_pred CCCCc
Confidence 87654
No 152
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.84 E-value=1.9e-20 Score=134.69 Aligned_cols=151 Identities=13% Similarity=0.184 Sum_probs=106.5
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcc--------e-eccccCCceEEE--EeeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSS--------R-KVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~--------~-~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+.+|++|+|.|.+.. +.|+++++..- . .....+..|+.. .+++|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 5789999999999999743 99999421100 0 011223356654 45789999999999999999
Q ss_pred EEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCce
Q psy3045 86 VVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKT 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 165 (267)
.+.+.. .....+.|.|..++. .+.. . ..+..+.|.|.+...|.+.
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~---~P~i------------------------------~-~~~~~v~L~C~~~~gp~p~ 131 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVS---KPMI------------------------------Y-WECSNATLTCEVLEGTDVE 131 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCC---CCEE------------------------------E-EEGGGTEEEEECSSCTTCE
T ss_pred EEEcCC-eEEEEEEEEEECCCC---CCEE------------------------------E-ecCCCEEEEEEeCCCCCCE
Confidence 998766 556667777765321 1111 1 1346699999994348999
Q ss_pred EEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 166 ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 166 ~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+.|++++..+.......|.+.. .+|+|.|+|.|.|..+.....
T Consensus 132 i~W~~~~~~l~~~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 132 LKLYQGKEHLRSLRQKTMSYQW--TNLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp EEEEETTEEEEEESSSEEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred EEEEECCeECcCCCCCEEEEEE--hhcCccEEEEEecCcCccccc
Confidence 9999999887644456666633 789999999999998765543
No 153
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=8.9e-20 Score=135.49 Aligned_cols=130 Identities=22% Similarity=0.468 Sum_probs=108.3
Q ss_pred ccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCc-eEEEEEE
Q psy3045 136 AAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESA-QASGELK 214 (267)
Q Consensus 136 ~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~l~ 214 (267)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......|.|.++..+|+|.|+|.+.+..+.. .....+.
T Consensus 20 ~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~ 99 (218)
T 3k0w_A 20 KITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLD 99 (218)
T ss_dssp CEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEE
T ss_pred EEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEE
Confidence 344556667899999999999999999999999999999988888999999999999999999999987643 3345565
Q ss_pred Eeccc------------CCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 215 LGGRF------------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 215 v~~~~------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
|.... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..+
T Consensus 100 V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~ 162 (218)
T 3k0w_A 100 VCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE 162 (218)
T ss_dssp EECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC
T ss_pred EEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC
Confidence 54321 1267777777778999999999999999999999999999988654
No 154
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.84 E-value=2.5e-21 Score=143.12 Aligned_cols=161 Identities=19% Similarity=0.308 Sum_probs=107.6
Q ss_pred eEEecCCCeEEEEEEecc---eeeeecccCcceeccc--------cCCceEEE----EeeEEEEeecccCCCeeEEEEEE
Q psy3045 24 RFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAV--------PLNDRVKQ----VSGTLIIKEAKVEDSGKYLCVVN 88 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~--------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~ 88 (267)
.+.+.+|++++|.|.+.. +.|+++..+....... ....|+.. .+.+|.|.+++.+|+|.|+|.+.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 88 (211)
T 3tv3_L 9 SASGSPGQSITISCTGTSNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSL 88 (211)
T ss_dssp EEEECTTCEEEEEEECCCSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred eEEEcCCCCEEEEEEECCCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEe
Confidence 788999999999999876 9999953332211111 12234432 24579999999999999999999
Q ss_pred cCCC--ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC--CCc
Q psy3045 89 NSVG--GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN--PVK 164 (267)
Q Consensus 89 ~~~~--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--p~~ 164 (267)
+..+ .....+.|.|...+ ...+... ..+....+..|+.+.|.|.+.+. |.+
T Consensus 89 ~~~~~~~~~~~~~l~V~~~~--~~~P~v~-----------------------~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 143 (211)
T 3tv3_L 89 VGNWDVIFGGGTKLTVLGQP--KAAPSVT-----------------------LFPPSSEELQANKATLVCLISDFYPGAV 143 (211)
T ss_dssp ETTTEEEECCCEEEEECCSC--CBCCEEE-----------------------EECCCHHHHHTTCEEEEEEEEEEBSSCC
T ss_pred cCCCceeECCCceEEEeCCC--CcCCeeE-----------------------ecCCchhhhcCCCeEEEEEeeeecCCCe
Confidence 9876 23444556665211 0111111 00111123369999999999885 357
Q ss_pred eEEEEECCccCCCC----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 165 TISWMKDGKPVPDH----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 165 ~~~W~~~~~~~~~~----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
.+.|+++|..+... + ...|.|..+..+|.|.|+|.|.|..+....
T Consensus 144 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~ 203 (211)
T 3tv3_L 144 TVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 203 (211)
T ss_dssp EEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEE
T ss_pred EEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEe
Confidence 99999999877531 1 145778888888999999999998754443
No 155
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.84 E-value=4.5e-20 Score=140.46 Aligned_cols=176 Identities=16% Similarity=0.262 Sum_probs=111.9
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCccee-------------ccccCCceEEEE------
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK-------------VAVPLNDRVKQV------ 66 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~-------------~~~~~~~~~~~~------ 66 (267)
+|.|...+ ..+.+.+|++|+|.|.+.+ +.|++...+.... .......|+...
T Consensus 6 ~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 6 HQVQLVQS--GAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp -CCEEEEC--CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ceEEEEec--CCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 45565555 7899999999999999865 8999854332111 111223455443
Q ss_pred eeEEEEeecccCCCeeEEEEEEcC------------CCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCC
Q psy3045 67 SGTLIIKEAKVEDSGKYLCVVNNS------------VGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPP 134 (267)
Q Consensus 67 ~~~l~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 134 (267)
..+|.|.+++.+|+|.|+|.+.+. .......+.|.|...+......... ....+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~--------------~~~~~ 149 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSG--------------GGGSE 149 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC------------------------CCCC
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccC--------------CCcce
Confidence 246999999999999999999886 2222334456665432110000000 00001
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCCCC-ceEEEEEC--CccCC---------------------CCCCCeEEeccCCC
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGNPV-KTISWMKD--GKPVP---------------------DHNEPVFRIDSVRK 190 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~~W~~~--~~~~~---------------------~~~~~~l~i~~~~~ 190 (267)
..+...+....+.+|++++|.|.+.+.+. +.+.|+++ +..+. ......|.|.++..
T Consensus 150 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 229 (256)
T 3juy_B 150 IVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEP 229 (256)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCH
Confidence 12223345568889999999999998775 89999983 22211 01224599999999
Q ss_pred CCCeEEEEEEEcCC
Q psy3045 191 EDKGMYQCVIRNEQ 204 (267)
Q Consensus 191 ~d~g~y~C~~~~~~ 204 (267)
+|+|.|.|.|.+..
T Consensus 230 ~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 230 EDFALYYCQVYGAS 243 (256)
T ss_dssp GGCSEEEEEECCSS
T ss_pred hHCEEEEEEEeeCC
Confidence 99999999998853
No 156
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.84 E-value=2.2e-20 Score=133.26 Aligned_cols=152 Identities=13% Similarity=0.168 Sum_probs=108.0
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcce------eccccCCceEEE--EeeEEEEeecccCCCeeEEEEEEcC
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSR------KVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKYLCVVNNS 90 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~------~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~ 90 (267)
..+.+.+|++|+|.|.+.. +.|+++...... .....+..|+.. .+++|.|.+++.+|+|.|+|.+.+.
T Consensus 3 ~~v~~~~G~~VtL~c~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEEETTCCEEECCCCSSCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred cEEEEEcCCCEEEcCCCCCCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 4678999999999999855 999996431100 001123456554 4578999999999999999999887
Q ss_pred CCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEE
Q psy3045 91 VGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMK 170 (267)
Q Consensus 91 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~ 170 (267)
.+ ...+.|.|..++. .+... .. .....|.|.+.+.|.+.+.|++
T Consensus 83 ~~--~~~~~L~V~~~~~---~p~i~------------------------------~~-~~~~~L~C~~~~~p~p~i~W~~ 126 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVS---KPMIY------------------------------WE-CSNATLTCEVLEGTDVELKLYQ 126 (171)
T ss_dssp CS--CEEEEEEEECCCC---CCEEE------------------------------EE-TTTTEEEEECSSCSSCEEEEEE
T ss_pred CC--cEEEEEEEECcCC---CCEEE------------------------------Ee-cCCcEEEEEeCCCCCcEEEEEE
Confidence 76 6667777765422 11111 11 1113799999998999999999
Q ss_pred CCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 171 DGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 171 ~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
++..+.......+.+. ...|.|.|+|.|.|..+.......
T Consensus 127 ~~~~l~~~~~~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~ 166 (171)
T 1ccz_A 127 GKEHLRSLRQKTMSYQ--WTNLRAPFKCKAVNRVSQESEMEV 166 (171)
T ss_dssp TTEEEEEESSSEEEEE--CSCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCEECcCCcceEEEEe--ccCCCceEEEEEEcccCcccceeE
Confidence 9988865555556554 367899999999999877655443
No 157
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.84 E-value=1.4e-19 Score=137.20 Aligned_cols=177 Identities=16% Similarity=0.233 Sum_probs=108.5
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecc
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAK 76 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~ 76 (267)
+.+...+ ..+.+.+|++|+|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 5 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 82 (250)
T 3esu_F 5 IVLIQST--SSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLE 82 (250)
T ss_dssp CCEECSC--SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEecC--CEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCC
Confidence 3455555 6888999999999999987 99999643221111 11123344322 2379999999
Q ss_pred cCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+..+. ......|.|...+......... .+.. ....+......+....+.+|+++.|.
T Consensus 83 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~v~~G~~v~L~ 152 (250)
T 3esu_F 83 QEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSG---GGGS-------GGGGSEVQLQQSGPELVKPGASVKIS 152 (250)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC----------------------------------CEECCCEEECTTCCEEEE
T ss_pred hhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccc---cccc-------cCcccceEEecCCceEEcCCceEEEE
Confidence 99999999999887554 2233455554421100000000 0000 00000111122334578899999999
Q ss_pred eEeCCCC--CceEEEEEC--CccCCC----------------------------CCCCeEEeccCCCCCCeEEEEEEEc
Q psy3045 156 CKYEGNP--VKTISWMKD--GKPVPD----------------------------HNEPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 156 C~~~~~p--~~~~~W~~~--~~~~~~----------------------------~~~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
|.+.+.+ .+.+.|+++ +..+.. .....|.|.++..+|+|.|.|.+.+
T Consensus 153 C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 153 CKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 9998876 789999997 433310 1123699999999999999999997
No 158
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.84 E-value=8.8e-20 Score=137.30 Aligned_cols=165 Identities=16% Similarity=0.261 Sum_probs=103.8
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceec-----------cccCCceEEEE-----eeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKV-----------AVPLNDRVKQV-----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~-----------~~~~~~~~~~~-----~~~l~i~~~~~~d~G~ 82 (267)
..+.+.+|++|+|.|.... +.|+++..+..... ......|+... ..+|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 87 (238)
T 2p1y_A 8 RNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV 87 (238)
T ss_dssp SEEEEETTCCEEEEEEECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred cceEEeCCCEEEEEeecCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence 6789999999999999322 99999633221110 01123344322 3489999999999999
Q ss_pred EEEEEEcCCCcc-----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 83 YLCVVNNSVGGE-----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 83 Y~C~~~~~~~~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
|+|.+.+..+.. .....|.|...+.....+... ....+...+....+.+|+++.|.|.
T Consensus 88 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~-----------------~~~~v~~~p~~~~v~~G~~v~L~C~ 150 (238)
T 2p1y_A 88 YFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAK-----------------KDGQVRQSPQSLTVWEGETAILNCS 150 (238)
T ss_dssp EEEEEEC------CEEECCCEEEEEECCCHHHHHHHHH-----------------HHTCCEEECSEEEEETTSCEEEEEE
T ss_pred EEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCccc-----------------ceeeEEccCceEEEeCCCeEEEEEE
Confidence 999999875421 123355555422100000000 0001111233447889999999999
Q ss_pred eCCCCCceEEEEECCc--cCC-----------------------CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 158 YEGNPVKTISWMKDGK--PVP-----------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 158 ~~~~p~~~~~W~~~~~--~~~-----------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
+.+.|.+.+.|++++. .+. ......|.|.++..+|+|.|+|.|.|..
T Consensus 151 ~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 151 YENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999889999999642 110 1123579999999999999999999873
No 159
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.84 E-value=5.1e-21 Score=143.34 Aligned_cols=155 Identities=21% Similarity=0.347 Sum_probs=109.3
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcc---ee----ccccCCceEE----------E-EeeEEEEeecccC
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSS---RK----VAVPLNDRVK----------Q-VSGTLIIKEAKVE 78 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~---~~----~~~~~~~~~~----------~-~~~~l~i~~~~~~ 78 (267)
..+.+.+|+++.|.|.+.+ +.|++++.... .. ....+..++. . .++.|.|.+++.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~ 87 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVG 87 (231)
T ss_dssp SEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGG
T ss_pred CcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcc
Confidence 6789999999999999886 99998643311 00 0001122332 2 2245999999999
Q ss_pred CCeeEEEEEEcCC-CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE-EEEe
Q psy3045 79 DSGKYLCVVNNSV-GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA-QFTC 156 (267)
Q Consensus 79 d~G~Y~C~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v-~l~C 156 (267)
|+|.|+|.+.+.. +.....+.|.|...+.. +... ..+....+.+|+.+ .|.|
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~---~~~~-----------------------~~~~~~~~~~g~~~~~l~C 141 (231)
T 2pet_A 88 DERDYVCVVRAGAAGTAEATARLNVFAKPEA---TEVS-----------------------PNKGTLSVMEDSAQEIATC 141 (231)
T ss_dssp GCEEEEEEEECGGGCEEEEEEEEEEEBCCCC---CEEE-----------------------ECCSSCCTTCCSEEEEEEE
T ss_pred cCceEEEEEEecCCCceEEEEEEEEEecCCC---cEEe-----------------------cCCcceeecCCCceEEEEE
Confidence 9999999999887 66777788888765432 1111 01112245578887 9999
Q ss_pred Ee-CCCCCceEEEEECCccCCCCC----------------------CCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 157 KY-EGNPVKTISWMKDGKPVPDHN----------------------EPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 157 ~~-~~~p~~~~~W~~~~~~~~~~~----------------------~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
.+ .+.|.+.+.|++++..+.... .+.|.+.....+|.|.|+|.|.|.
T Consensus 142 ~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 142 NSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred EeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 99 788999999999998876543 144777655566699999999995
No 160
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.84 E-value=4.5e-20 Score=144.64 Aligned_cols=176 Identities=24% Similarity=0.306 Sum_probs=118.0
Q ss_pred eEEecCCCeEEEEEEecc---------------eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCeeEE
Q psy3045 24 RFKKPGGESFALLCEAQE---------------NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~---------------~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~ 84 (267)
...+.+|+.+.|.|.+.+ +.|++++.... ...++.. ....|.|.+++.+|+|.|+
T Consensus 107 ~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 180 (317)
T 2y25_A 107 KKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIR------YSDRVKTGVTGEQIWLQINEPTPNDKGKYV 180 (317)
T ss_dssp HHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCC------CCSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred ceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECC------CCCCeEEeccCCEEEEEECcCCcccCeeEE
Confidence 344567777777777642 89999643221 1222222 2246999999999999999
Q ss_pred EEEEcCCCccEEEEEEEEEeccccccCC---ceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 85 CVVNNSVGGESVETVLTVTAPLAAGVEP---TVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 85 C~~~~~~~~~~~~~~l~V~~~~~~~~~~---~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
|.+.|..+.....+.+.|.......... ...... ...++......+....+..|+.+.|.|.+.+.
T Consensus 181 C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~-----------~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~ 249 (317)
T 2y25_A 181 MELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA-----------EKNRARVLGGLPDVVTIQEGKALNLTCNVWGD 249 (317)
T ss_dssp EEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHH-----------TTTSCEEEEBCCSEEEEETTSBBCEEEEEECS
T ss_pred EEEEeCCceEEEEEEEeeeeccccchhhcccCCcccC-----------cCCCCcccccCCccEEEEcCCEEEEEEEEecC
Confidence 9999988877766666543210000000 000000 00011111122334578899999999999999
Q ss_pred CCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 162 PVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 250 p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 250 PPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314 (317)
T ss_dssp SCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 999999999998875432 1389999999999999999999999988888887775
No 161
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.84 E-value=4e-20 Score=137.12 Aligned_cols=161 Identities=18% Similarity=0.323 Sum_probs=105.6
Q ss_pred eeEEecCCCeEEEEEEe-cc------eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecccCCCeeE
Q psy3045 23 IRFKKPGGESFALLCEA-QE------NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~-~~------~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y 83 (267)
....+.+|++++|.|.+ .+ +.|++++.+..... ......|+... ..+|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 67899999999999995 32 99999643322110 01123344432 34899999999999999
Q ss_pred EEEEEcCCCc--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 84 LCVVNNSVGG--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 84 ~C~~~~~~~~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
+|.+.+..+. ......|.|.... ..+.... ..+.. ....|+.+.|.|.+.+.
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~---~~P~v~~----------------------~~~~~-~~~~g~~v~L~C~~~g~ 141 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTV---AAPSVFI----------------------FPPSD-EQLKSGTASVVCLLNNF 141 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCC---BCCEEEE----------------------ECCCH-HHHHTTEEEEEEEEEEE
T ss_pred EEEEEeCCCcceECCCEEEEEcCCC---CCCceEE----------------------eCCCh-hhccCCcEEEEEEEEeE
Confidence 9999988761 1223455553211 1111110 00100 12358899999999884
Q ss_pred -CCc-eEEEEECCccCCCC-----------CC-----CeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 162 -PVK-TISWMKDGKPVPDH-----------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 162 -p~~-~~~W~~~~~~~~~~-----------~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
|.+ .+.|+++|..+... +. +.|.|.....+|.|.|+|.|.|.......
T Consensus 142 ~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 142 YPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp BSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred cCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 554 89999999876533 11 26888888899999999999998755443
No 162
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.84 E-value=6.4e-20 Score=139.41 Aligned_cols=168 Identities=18% Similarity=0.231 Sum_probs=107.3
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
.++.+.+|++|+|.|.+.+ +.|++...+..... ......|+... ..+|.|.+++
T Consensus 9 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 88 (253)
T 3uzq_A 9 GAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLT 88 (253)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCC
Confidence 5788999999999999865 89999533222111 11123444432 2359999999
Q ss_pred cCCCeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+..+.. .....|.|............. ...++..+...+....+.+|++++|.
T Consensus 89 ~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~--------------~~~~~~~v~~~p~~~~v~~G~~v~L~ 154 (253)
T 3uzq_A 89 SGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSG--------------GGGSELVMTQTPASLAVSLGQRATIS 154 (253)
T ss_dssp GGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC-----------------------CCEEEECSEEEECTTSCEEEE
T ss_pred cccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccC--------------CCcccceEECcCCeEEEeCCCCEEEE
Confidence 999999999999865442 344556665321000000000 00011112223445588899999999
Q ss_pred eEeCCCCCc----eEEEEECC--ccCC---------------------CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 156 CKYEGNPVK----TISWMKDG--KPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 156 C~~~~~p~~----~~~W~~~~--~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
|.+.+.+.+ .+.|++++ ..+. ......|.|.+++.+|+|.|.|.+.|..
T Consensus 155 C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 230 (253)
T 3uzq_A 155 CRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEV 230 (253)
T ss_dssp EEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 999998766 99999852 2211 0112369999999999999999999854
No 163
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.84 E-value=5.7e-20 Score=134.25 Aligned_cols=129 Identities=22% Similarity=0.335 Sum_probs=101.6
Q ss_pred ccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------C--CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 138 GVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------E--PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 138 ~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~--~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... . ..|.|.++..+|+|.|+|.+.|..+.
T Consensus 8 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 87 (197)
T 2j8h_A 8 KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGS 87 (197)
T ss_dssp EECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEE
T ss_pred EEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCc
Confidence 344455688999999999999999999999999998875432 1 28999999999999999999998877
Q ss_pred ceEEEEEEEeccc--CCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 207 AQASGELKLGGRF--DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 207 ~~~~~~l~v~~~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
......+.|.... ..|.....+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+.
T Consensus 88 ~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~ 149 (197)
T 2j8h_A 88 VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG 149 (197)
T ss_dssp EEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSS
T ss_pred eeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCC
Confidence 7667777765311 11222222345678899999999999999999999999999887543
No 164
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.84 E-value=1e-20 Score=142.27 Aligned_cols=170 Identities=16% Similarity=0.282 Sum_probs=112.1
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceEEE----EeeEEEEeecc
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRVKQ----VSGTLIIKEAK 76 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~~~----~~~~l~i~~~~ 76 (267)
+.+...+ ..+.+.+|++++|.|.+.+ +.|++...+..... ......|+.. .+.+|.|.+++
T Consensus 25 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 25 IQMTQSP--SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 102 (237)
T ss_dssp CCEEEEC--SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceEEeCC--CeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC
Confidence 4455445 6789999999999999988 99999643322110 1112334432 24589999999
Q ss_pred cCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+..+. ......+.|.... ..+.... .+....+..|+.+.|.
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---~~p~v~~-----------------------~~~~~~~~~g~~v~l~ 156 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKRTV---AAPSVFI-----------------------FPPSDEQLKSGTASVV 156 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEECCC---BCCEEEE-----------------------ECCCHHHHHHTEEEEE
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEecCC---CCCceEE-----------------------eCCChhhccCCceEEE
Confidence 99999999999876653 2233455554311 1111110 0011123358889999
Q ss_pred eEeCCC-C-CceEEEEECCccCCCC----------C------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 156 CKYEGN-P-VKTISWMKDGKPVPDH----------N------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 156 C~~~~~-p-~~~~~W~~~~~~~~~~----------~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
|.+.+. | .+.+.|+++|..+... . .+.|.+.....+|.|.|+|.|.|.......+.
T Consensus 157 C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 230 (237)
T 3sob_L 157 CLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 230 (237)
T ss_dssp EEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred EEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceee
Confidence 999874 4 5899999999877532 1 13577888888899999999999876544433
No 165
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.84 E-value=1.1e-20 Score=141.97 Aligned_cols=168 Identities=18% Similarity=0.307 Sum_probs=107.7
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCccee--------ccccCCceEEEE----eeEEEEee
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK--------VAVPLNDRVKQV----SGTLIIKE 74 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~--------~~~~~~~~~~~~----~~~l~i~~ 74 (267)
+.+.. | ....+.+|++++|.|.+.+ +.|+++..+.... .......|+... ..+|.|.+
T Consensus 21 ~~v~~-p--~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 97 (234)
T 2j6e_L 21 SVLTQ-P--PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISG 97 (234)
T ss_dssp CCCBC-C--SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEES
T ss_pred cEEeC-C--CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECC
Confidence 44444 4 6788999999999999875 8999964332110 001123344332 34899999
Q ss_pred cccCCCeeEEEEEEcCCCc---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 75 AKVEDSGKYLCVVNNSVGG---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
++.+|+|.|+|.+.+..+. ....+.|.|...+. . +|......+ ......|+.
T Consensus 98 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--~----------------------~p~v~~~~~-~~~~~~g~~ 152 (234)
T 2j6e_L 98 LRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPK--A----------------------APSVTLFPP-SSEELQANK 152 (234)
T ss_dssp CCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCC--C----------------------CCCCCEECC-CHHHHTTSC
T ss_pred CCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCC--C----------------------CCcccccCC-ChhHhcCCc
Confidence 9999999999999987762 11122333321110 0 010000011 112335889
Q ss_pred EEEEeEeCCCC-C-ceEEEEECCccCCCC---------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 152 AQFTCKYEGNP-V-KTISWMKDGKPVPDH---------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 152 v~l~C~~~~~p-~-~~~~W~~~~~~~~~~---------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
++|.|.+.+.+ + +.+.|+++|..+... ..+.|.|.....+|.|.|+|.|.|.......
T Consensus 153 v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 153 ATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp CCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred eEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 99999999864 3 499999999876421 1135788888899999999999998765443
No 166
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=8e-21 Score=144.45 Aligned_cols=167 Identities=19% Similarity=0.303 Sum_probs=110.1
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----------eeeeecccCccee--------ccccCCceEEE----EeeEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRK--------VAVPLNDRVKQ----VSGTL 70 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~--------~~~~~~~~~~~----~~~~l 70 (267)
+|.+...+ ..+.+.+|++++|.|.+.+ +.|+++.++.... .......|+.. ...+|
T Consensus 38 ~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 115 (254)
T 2c1o_A 38 ELVMTQSP--LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTL 115 (254)
T ss_dssp CCCEEEEC--SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred ceeEEeCC--ceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEE
Confidence 55666555 6899999999999999853 8899864333211 11112244433 23489
Q ss_pred EEeecccCCCeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC
Q psy3045 71 IIKEAKVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG 149 (267)
Q Consensus 71 ~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g 149 (267)
.|.+++.+|+|.|+|.+.+..+.. .....+.|.... ..+.... ..+ ......|
T Consensus 116 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~---~~P~v~~----------------------~~~-~~~~~~g 169 (254)
T 2c1o_A 116 KISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD---AAPTVSI----------------------FPP-SSEQLTS 169 (254)
T ss_dssp EESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC---BCCEEEE----------------------ECC-CHHHHHT
T ss_pred EECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC---CCCeeEe----------------------ecC-ChhhccC
Confidence 999999999999999999875532 222345553211 0111110 000 0012357
Q ss_pred CCEEEEeEeCCC-CC-ceEEEEECCccCCCC-----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 150 RPAQFTCKYEGN-PV-KTISWMKDGKPVPDH-----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 150 ~~v~l~C~~~~~-p~-~~~~W~~~~~~~~~~-----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+.+.|.|.+.+. |. +.+.|+++|..+... + .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 170 ~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 170 GGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp TEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 899999999884 43 479999999876543 1 2468899999999999999999987654
No 167
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.84 E-value=1.7e-20 Score=149.14 Aligned_cols=165 Identities=18% Similarity=0.251 Sum_probs=94.4
Q ss_pred eeEEecCCCeEEEEEEe-----cc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCC-
Q psy3045 23 IRFKKPGGESFALLCEA-----QE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSV- 91 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~-----~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~- 91 (267)
....+.+|+++.|.|.+ .+ +.|++++.. +....++...+..|.|.+++.+|+|.|+|.+.|..
T Consensus 128 ~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~------l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 201 (349)
T 4dep_C 128 VHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYK------IQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPEN 201 (349)
T ss_dssp EEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEE------CCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEET
T ss_pred cceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEE------CCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeC
Confidence 46788999999999984 33 999996331 12224444555789999999999999999999987
Q ss_pred Ccc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCce--EEEecCCCEEEEeEeC----CCC
Q psy3045 92 GGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTV--QTIDFGRPAQFTCKYE----GNP 162 (267)
Q Consensus 92 ~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~~g~~v~l~C~~~----~~p 162 (267)
+.. ...+.|.|...+.....+... ..... ..+..|+.+.|.|.+. +.|
T Consensus 202 g~~~~~~~~~~l~v~~~~~~~~~p~i~-----------------------~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p 258 (349)
T 4dep_C 202 GRTFHLTRTLTVKVVGSPKNAVPPVIH-----------------------SPNDHVVYEKEPGEELLIPCTVYFSFLMDS 258 (349)
T ss_dssp TEEEEEEEEEEEEEECCGGGCCSCEEC---------------------------------------CCCEEEEECCCTTC
T ss_pred CEEEEEEEEEEEEEEccCCCCCCCeEe-----------------------cCCCceeEEEecCCcEEEEEEEEEccCCCC
Confidence 333 455566665532211111111 00111 1567899999999998 568
Q ss_pred CceEEEEECCccCCCC----------------C---CCeEEeccCCCCCC-eEEEEEEEcCCCCceEEEEEEEe
Q psy3045 163 VKTISWMKDGKPVPDH----------------N---EPVFRIDSVRKEDK-GMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~----------------~---~~~l~i~~~~~~d~-g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.+.|++++..+... . ...|.|.++..+|. |.|+|.|.|..|....++.|.+.
T Consensus 259 ~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 259 RNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp CCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred CCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 8999999999887541 1 12388999999999 99999999999988888777775
No 168
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=1.3e-19 Score=130.71 Aligned_cols=124 Identities=26% Similarity=0.510 Sum_probs=104.0
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.+.+..+..
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 86 (182)
T 1rhf_A 7 GAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETE 86 (182)
T ss_dssp CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCE
T ss_pred eCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcE
Confidence 34555688999999999999998989999999998876542 2579999999999999999999986543
Q ss_pred -eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcCCC
Q psy3045 208 -QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 208 -~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~~~ 265 (267)
.....+.|. .+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+++|..+...
T Consensus 87 ~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 143 (182)
T 1rhf_A 87 ISQPVWLTVE---GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP 143 (182)
T ss_dssp ECCCEEEEEE---CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS
T ss_pred EEEEEEEEEe---cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC
Confidence 345666665 57888887877889999999999999999999 99999999988653
No 169
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.83 E-value=9.7e-21 Score=140.59 Aligned_cols=160 Identities=19% Similarity=0.311 Sum_probs=103.8
Q ss_pred eEEecCCCeEEEEEEecc------eeeeecccCccee------------ccccCCceEEE----EeeEEEEeecccCCCe
Q psy3045 24 RFKKPGGESFALLCEAQE------NMWFKFIEGSSRK------------VAVPLNDRVKQ----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~------------~~~~~~~~~~~----~~~~l~i~~~~~~d~G 81 (267)
.+.+.+|++++|.|.+.+ +.|++...+.... .......|+.. .+.+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 788999999999999876 8999953222111 11112234433 2457999999999999
Q ss_pred eEEEEEEcCCC-----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 82 KYLCVVNNSVG-----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 82 ~Y~C~~~~~~~-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.|+|.+.+..+ .....+.|.|...+. ..+.... .+.......|+.+.|.|
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~~~~-----------------------~~~~~~~~~~~~v~L~C 143 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPK--STPTLTV-----------------------FPPSSEELKENKATLVC 143 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCC--BCCEEEE-----------------------ECCCHHHHHTTEEEEEE
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCC--CCceEEe-----------------------eCCCcccccCCcEEEEE
Confidence 99999998765 123345566653211 1111110 00111334578899999
Q ss_pred EeCC-CCCc-eEEEEECCccCCCCC--------C------CeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 157 KYEG-NPVK-TISWMKDGKPVPDHN--------E------PVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 157 ~~~~-~p~~-~~~W~~~~~~~~~~~--------~------~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.+.+ .|.+ .+.|+++|..+.... . +.|.+.....+|.|.|+|.|.|..+...
T Consensus 144 ~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 144 LISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp EEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEE
T ss_pred EECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccc
Confidence 9988 4666 899999998875410 1 2366777777789999999999875443
No 170
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.83 E-value=6.6e-20 Score=139.65 Aligned_cols=168 Identities=18% Similarity=0.280 Sum_probs=108.2
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
....+.+|++|+|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 4568999999999999874 89999643221111 01123455432 34899999999
Q ss_pred CCCeeEEEEEEcCCC-------cc--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 78 EDSGKYLCVVNNSVG-------GE--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~-------~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
+|+|.|+|.+.+..| .. ...+.|.|...+........ + ....+..+...+....+.+
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~-----~---------~~~~~~~~~~~p~~~~v~~ 153 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGS-----G---------GGGSDIKLTQSPSLLSASV 153 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSS-----C---------CCCCEECSCEETSEECCCT
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCcccccccc-----C---------CCccceEEEccCCEEEEcC
Confidence 999999999998754 11 12345666543210000000 0 0000111112234446888
Q ss_pred CCCEEEEeEeCCCCCceEEEEE--CCccCC-------------C--------CCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 149 GRPAQFTCKYEGNPVKTISWMK--DGKPVP-------------D--------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 149 g~~v~l~C~~~~~p~~~~~W~~--~~~~~~-------------~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
|++++|.|.+.+.+.+.+.|++ ++..+. . .....|.|.++..+|+|.|.|.|.|..
T Consensus 154 G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 154 GDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp TCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 9999999999998888999999 555431 0 122479999999999999999999864
No 171
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.83 E-value=1.8e-19 Score=137.22 Aligned_cols=167 Identities=17% Similarity=0.233 Sum_probs=105.6
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc------------ccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA------------VPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~------------~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
....+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++.
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 95 (257)
T 3gkz_A 16 GPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSS 95 (257)
T ss_dssp CCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCCh
Confidence 5678999999999999765 899995332221111 1123444432 23799999999
Q ss_pred CCCeeEEEEEEcCCCc----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 78 EDSGKYLCVVNNSVGG----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
+|+|.|+|.+.+..+. ....+.|.|........... ....++..+...+....+.+|++++
T Consensus 96 ~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~---------------~~~~~~~~~~~~p~~~~v~~G~~v~ 160 (257)
T 3gkz_A 96 EDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGS---------------GGGGSQIVLTQSPAIMSASPGEKVT 160 (257)
T ss_dssp GGCEEEEEEEECTTCTTCEEECCCEEEEEC---------C---------------TTCCCCCCEECSCSEEEECTTCCEE
T ss_pred hhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhccccc---------------CCCccceEEEcCCceEEEeCCCcEE
Confidence 9999999999986221 12334555554311000000 0000112222334456889999999
Q ss_pred EEeEeCCCCCc-eEEEEEC--CccCCC---------------------CCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 154 FTCKYEGNPVK-TISWMKD--GKPVPD---------------------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 154 l~C~~~~~p~~-~~~W~~~--~~~~~~---------------------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
|.|.+.+.+.+ .+.|+++ +..+.. .....|.|.+++.+|+|.|.|.+.+..
T Consensus 161 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 161 LTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp EEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 99999988766 9999984 222210 022459999999999999999998743
No 172
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.83 E-value=1.6e-19 Score=129.78 Aligned_cols=156 Identities=17% Similarity=0.222 Sum_probs=108.3
Q ss_pred eeEEecCCCeEEEEEEe-c--c----eeeeecccCcceec------cccCCceEEE-EeeEEEEeecccCCCeeEEEEEE
Q psy3045 23 IRFKKPGGESFALLCEA-Q--E----NMWFKFIEGSSRKV------AVPLNDRVKQ-VSGTLIIKEAKVEDSGKYLCVVN 88 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~-~--~----~~W~~~~~~~~~~~------~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~ 88 (267)
..+.+.+|++|+|.|.. . . +.|++..++..... ......|+.. .+++|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 57889999999999943 2 1 99999211221100 0012344433 45689999999999999999999
Q ss_pred cCCCccE--EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 89 NSVGGES--VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 89 ~~~~~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
+..|... ..+.|.|..+.. .|.. .. .+..+.|.|.+.+.|.+.+
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~---~P~i------------------------------~~-~~~~v~L~C~~~~~p~~~~ 132 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVS---KPKI------------------------------SW-TCINTTLTCEVMNGTDPEL 132 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCC---CCEE------------------------------EE-ETTTTEEEEECSSCSSCEE
T ss_pred eCCCceeEEEEEEEEEcCcCC---CCEE------------------------------EE-ccCcEEEEeEccCCCCCEE
Confidence 9887643 456677765321 1111 11 2447999999999888999
Q ss_pred EEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEE
Q psy3045 167 SWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 167 ~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
.|+++|..+ ......+.+.. ..+|.|.|+|.|.|..+.......+.
T Consensus 133 ~W~~~g~~l-~~~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 133 NLYQDGKHL-KLSQRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EEEESSCEE-EEESSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEECCEEC-CCCCcEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 999999888 33344555443 47899999999999998776665543
No 173
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.83 E-value=2e-20 Score=139.12 Aligned_cols=168 Identities=20% Similarity=0.246 Sum_probs=110.3
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcceec----------cccCCce-----------EEEEeeEEEEe
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKV----------AVPLNDR-----------VKQVSGTLIIK 73 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~----------~~~~~~~-----------~~~~~~~l~i~ 73 (267)
+++.+..|++|+|.|.+.+ +.|+|++....... ......+ ....+.+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 4678899999999999876 78999643221100 0011111 11234679999
Q ss_pred ecccCCCeeEEEEEEcCCCccE-EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE
Q psy3045 74 EAKVEDSGKYLCVVNNSVGGES-VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA 152 (267)
Q Consensus 74 ~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v 152 (267)
+++.+|+|.|+|.+.+..+... ....+.+...+.....+ .......++.+
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~ 139 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEA-----------------------------QEVTIGPQSVA 139 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEE-----------------------------CCBCCSSSCEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecc-----------------------------cceeecceeee
Confidence 9999999999999998776543 33334343322211111 01134456667
Q ss_pred EEEeEeC-CCCCceEEEEECCccCCC-------CC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEeccc
Q psy3045 153 QFTCKYE-GNPVKTISWMKDGKPVPD-------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 219 (267)
Q Consensus 153 ~l~C~~~-~~p~~~~~W~~~~~~~~~-------~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~ 219 (267)
.+.|.+. +.|++.+.|++++..+.. .+ .+.|.|..+..+|+|.|+|.|.|..+....+..+.+.+.|
T Consensus 140 ~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 140 VARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EEEEEEEEEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred eeeeeecCCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 7777654 567889999998765421 11 2369999999999999999999998887777767666544
No 174
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.83 E-value=1.5e-20 Score=142.94 Aligned_cols=159 Identities=18% Similarity=0.292 Sum_probs=90.0
Q ss_pred cccCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 75 AKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
++..|+|.|+|.|. |.......+.+...+. +...+....+.+|+++.|
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~-----------------------------~~~~p~~~~v~~G~~v~L 58 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELV-----------------------------MTQSPLTLSVTIGQPASI 58 (254)
T ss_dssp ------------------------------CCC-----------------------------EEEECSEEEECTTSCEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeecee-----------------------------EEeCCceEEecCCCcEEE
Confidence 67899999999997 3322222222222111 111234458889999999
Q ss_pred EeEeCCCC-----CceEEEEECC--ccCC----------C-----------CCCCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 155 TCKYEGNP-----VKTISWMKDG--KPVP----------D-----------HNEPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 155 ~C~~~~~p-----~~~~~W~~~~--~~~~----------~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.|.+.+.+ .+.+.|++++ ..+. . .....|.|.+++.+|+|.|.|.|.+..+.
T Consensus 59 ~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 138 (254)
T 2c1o_A 59 SCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPP 138 (254)
T ss_dssp EEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSC
T ss_pred EeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcce
Confidence 99999887 3899999843 2210 0 02237999999999999999999987543
Q ss_pred ce-EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCCC
Q psy3045 207 AQ-ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVNA 265 (267)
Q Consensus 207 ~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~~ 265 (267)
.. ....+.+.....+|.+...+.......|+.+.|.|.+.|.+++ .+.|+++|+.+..+
T Consensus 139 ~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 200 (254)
T 2c1o_A 139 TFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 200 (254)
T ss_dssp EEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTT
T ss_pred EecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCc
Confidence 21 1234556543346777664433334468899999999985443 69999999987654
No 175
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.83 E-value=1.7e-20 Score=138.78 Aligned_cols=159 Identities=23% Similarity=0.301 Sum_probs=104.1
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
....+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEE
Confidence 6889999999999999764 89999643322110 01123444332 3489999999999999
Q ss_pred EEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 83 YLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 83 Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
|+|.+.+..+.. .....|.|..... ..+.... . +....+..|+.+.|.|.+.+.
T Consensus 88 Y~C~~~~~~~~~~~~~~~l~V~~~~~--~~P~v~~----------------------~-~~~~~~~~g~~v~L~C~~~g~ 142 (212)
T 1q0x_L 88 YFCALWSNNKLVFGGGTKLTVLGQPK--SSPTVTL----------------------F-PPSSEELSTAKATLVCTITDF 142 (212)
T ss_dssp EEEEEECSSCEEECCCEEEEECCSCC--BCCEEEE----------------------E-CCCHHHHTTTEEEEEEEEEEE
T ss_pred EEEEEecCchhhcCCCeEEEEecCCC--CCCeeEE----------------------e-CCCHHHccCCcEEEEEEEEEE
Confidence 999999876532 2233455532110 1111110 0 001123358899999999885
Q ss_pred C-Cc-eEEEEECCccCCCC----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 162 P-VK-TISWMKDGKPVPDH----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 162 p-~~-~~~W~~~~~~~~~~----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
+ ++ .+.|+++|..+... + ...|.|.....+|.|.|+|.|.|....
T Consensus 143 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 143 YPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp BSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred eCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 4 33 89999999876432 1 125778888888999999999997643
No 176
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=1.4e-19 Score=140.04 Aligned_cols=155 Identities=14% Similarity=0.177 Sum_probs=108.4
Q ss_pred EEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCcc-EEEEE
Q psy3045 25 FKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGE-SVETV 99 (267)
Q Consensus 25 ~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~ 99 (267)
..+.+|+++.|.|.+.. +.|+++.++........... .+. ...|+|.|+|.+.+..+.. +....
T Consensus 105 ~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~~~~~~-------~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~ 173 (289)
T 3mjg_X 105 IFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQR-------GFS----GIFEDRSYICKTTIGDREVDSDAYY 173 (289)
T ss_dssp EEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCCEETTT-------EEE----ECCCSSEEEEEEEETTEEEECCCEE
T ss_pred EEeecCCeEEEEeEcCCCCceEEEEeCCCCCccceeecCCc-------Cee----eeccCcEEEEEEEeCCceeeeeeEE
Confidence 78999999999999987 89988643332211111111 111 3679999999998766542 33344
Q ss_pred EEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-
Q psy3045 100 LTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH- 178 (267)
Q Consensus 100 l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~- 178 (267)
+.|..... +... ..+....+.+|+.+.|.|.+.+.|.+.+.|++++......
T Consensus 174 l~v~~~~~----p~i~-----------------------~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~ 226 (289)
T 3mjg_X 174 VYRLQVSS----INVS-----------------------VNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLV 226 (289)
T ss_dssp EEECCCCC----CCCE-----------------------EEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCC
T ss_pred EEecCCCC----CCcE-----------------------EeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcc
Confidence 55443211 1000 1112236788999999999999999999999877654321
Q ss_pred -------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 179 -------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 179 -------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
....|.|.++..+|+|.|+|.|.|..|....+..|.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 278 (289)
T 3mjg_X 227 EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITV 278 (289)
T ss_dssp CCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred cccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEE
Confidence 226899999999999999999999999999999888874
No 177
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.83 E-value=2e-20 Score=143.63 Aligned_cols=205 Identities=15% Similarity=0.157 Sum_probs=95.3
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
....|.+|+++.|.|.+.- +.|.-...... .. ..+ .....+.+.+++. .|.|+|.+.......+..
T Consensus 7 ~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~----~~-~~g--~~~~~~~l~~v~~--~~~y~C~~~~~~~~~~~~ 77 (291)
T 1mq8_A 7 SKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKE----LL-LPG--NNRKVYELSNVQE--DSQPMCYSNCPDGQSTAK 77 (291)
T ss_dssp SEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCC----CC-CSC--SSEEEEEEESCCS--CCCCEEEEECSSCEEEEE
T ss_pred CccEEcCCCeEEEEEeCCCCCCccceEEecCCCcc----cc-cCC--CceEEEEEEeccc--CCeEEEEEEcCCccEEEE
Confidence 5789999999999999875 67753111110 00 010 0112567888774 356999997544345666
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CCc--eEEEEECCcc
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PVK--TISWMKDGKP 174 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~--~~~W~~~~~~ 174 (267)
+.|.|..+|...... +....+.+|+.++|.|.+.+. |.. .|+|+|+++.
T Consensus 78 v~l~V~~~P~~v~I~----------------------------~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~ 129 (291)
T 1mq8_A 78 TFLTVYWTPERVELA----------------------------PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKE 129 (291)
T ss_dssp CEEEECBCCSCCCBC----------------------------CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSE
T ss_pred EEEEEecCCCCCEEe----------------------------cCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEE
Confidence 677777654321111 000146779999999999876 433 6899999987
Q ss_pred CCCCC------CCeEEeccCCCCCCeEEEEEEEcCCCC-c-----eEEEEEEEecccCCCeeecCCceeEEecCCcEEEE
Q psy3045 175 VPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQES-A-----QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFK 242 (267)
Q Consensus 175 ~~~~~------~~~l~i~~~~~~d~g~y~C~~~~~~~~-~-----~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~ 242 (267)
+.... ...+.+.....++.+.|+|.|.+..+. . ..+....+.+.+.|+..........+.+|+.++|.
T Consensus 130 l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~ 209 (291)
T 1mq8_A 130 LKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVV 209 (291)
T ss_dssp EEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------
T ss_pred eecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEE
Confidence 64221 234555555555666999999987542 1 11222233333333221111112367899999999
Q ss_pred EEeecCCCC---cEEEEECCEEcCC
Q psy3045 243 CIASGNPTP---EISWYLDGKKLVN 264 (267)
Q Consensus 243 C~~~~~p~~---~i~W~~~~~~l~~ 264 (267)
|.+.|.+++ .+.|++||+.+..
T Consensus 210 C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 210 CSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp -------------------------
T ss_pred EEcCCCCCCcccEEEEEECCEecCc
Confidence 999998665 6999999998863
No 178
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.83 E-value=2e-20 Score=137.48 Aligned_cols=167 Identities=16% Similarity=0.189 Sum_probs=98.9
Q ss_pred ecCCCeEEEEEEecc--eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEEEEEEEe
Q psy3045 27 KPGGESFALLCEAQE--NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 27 v~~g~~v~l~C~~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
+.+|++++|.|.+.. +.|+|++... ... ...+.+|.|.+++.+|+|.|+|.+.+.. . ..+.|.|..
T Consensus 15 ~~~G~~v~L~C~~p~~~i~W~k~g~~l--~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~~ 82 (204)
T 1sy6_A 15 YQEDGSVLLTCDAEAKNITWFKDGKMI--GFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYRM 82 (204)
T ss_dssp CCSSSEEEEEECSCSSEEEEEETTEEE--EEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEEC
T ss_pred ecCCCeEEEEEcCCCCEEEEEECCEEC--CCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEEE
Confidence 468999999999833 9999963211 110 1134579999999999999999965422 2 223344331
Q ss_pred ccccccCCc---------eEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccC
Q psy3045 105 PLAAGVEPT---------VQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV 175 (267)
Q Consensus 105 ~~~~~~~~~---------~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~ 175 (267)
......... ......+... ..++..+...+ .....+|+.+.|.|. +.|.+.+.|++++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l 152 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDG-------NEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNI 152 (204)
T ss_dssp -------------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEE
T ss_pred eccccccccccccccccccccccccccc-------cccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEEC
Confidence 000000000 0000000000 00000111111 112237999999998 7788899999999876
Q ss_pred CCC--------CCCeEEeccC-CCCCCeEEEEEEEcCCCCc-eEEEEEEE
Q psy3045 176 PDH--------NEPVFRIDSV-RKEDKGMYQCVIRNEQESA-QASGELKL 215 (267)
Q Consensus 176 ~~~--------~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~-~~~~~l~v 215 (267)
... ....|.|.++ ..+|+|.|+|.|.|..+.. ...+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 153 GGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp SCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred CCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 432 3578999999 9999999999999998852 33444443
No 179
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.83 E-value=1e-19 Score=138.54 Aligned_cols=169 Identities=17% Similarity=0.220 Sum_probs=106.0
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 3567999999999999865 899985433221111 1123444432 2359999999
Q ss_pred cCCCeeEEEEEEcCC----CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE
Q psy3045 77 VEDSGKYLCVVNNSV----GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA 152 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~----~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v 152 (267)
.+|+|.|+|.+.+.. +.....+.|.|...+......... .....+..+...+....+.+|+++
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~~~~v~~G~~v 156 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSG-------------GGGSTDIQLTQSPSSLSASLGERV 156 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC----------------------------CCCCEEEECSEEEECTTCCE
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccC-------------CCCccccEEEcCCCeEEEECCCCE
Confidence 999999999998862 222334556665421000000000 000001122233445588899999
Q ss_pred EEEeEeCCCCCceEEEEECC--ccCC---------------------CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 153 QFTCKYEGNPVKTISWMKDG--KPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 153 ~l~C~~~~~p~~~~~W~~~~--~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
+|.|.+.+.+.+.+.|+++. ..+. ......|.|.++..+|+|.|.|.+.+..
T Consensus 157 ~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 231 (256)
T 3umt_A 157 SITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASS 231 (256)
T ss_dssp EEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSS
T ss_pred EEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCC
Confidence 99999999888899999842 2111 0112359999999999999999998854
No 180
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=140.63 Aligned_cols=166 Identities=20% Similarity=0.366 Sum_probs=110.8
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCcceec-------cccCCceEEEE-------eeEEEEeecccC
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKV-------AVPLNDRVKQV-------SGTLIIKEAKVE 78 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~-------~~~~~~~~~~~-------~~~l~i~~~~~~ 78 (267)
..+.+.+|++++|.|.+.+ +.|++++....... ...+..|.... +.+|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 4567899999999998653 88999643221100 11223444332 568999999999
Q ss_pred CCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe
Q psy3045 79 DSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY 158 (267)
Q Consensus 79 d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 158 (267)
|+|.|+|.+.+.. ..+..+.|.|...+. .+.. .. .....+..|+.+.|.|.+
T Consensus 83 D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~---~p~i-----------------------~~-~~~~~v~~G~~~~l~C~~ 134 (222)
T 4i0k_A 83 DEGSYTCFVSIQD-FDSAAVSLQVAAPYS---KPSM-----------------------TL-EPNKDLRPGNMVTITCSS 134 (222)
T ss_dssp GCSCEEEEEEECC-CCCCCCCCCCCBCCC---CCEE-----------------------EC-CC-----CCSEEEEEEEE
T ss_pred cCEEEEEEEEeCC-CceEEEEEEEEcCCC---CCcE-----------------------Ee-CCCceecCCceEEEEEec
Confidence 9999999999753 333334444443211 0000 01 112256679999999998
Q ss_pred -CCCCCceEEEEE-CCccCCCC--------CC---CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 159 -EGNPVKTISWMK-DGKPVPDH--------NE---PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 159 -~~~p~~~~~W~~-~~~~~~~~--------~~---~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.+.|.+.+.|++ ++..+... .. ..|.+..+..+|.|.|+|.|.|..+....+..+.|.
T Consensus 135 ~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 135 YQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp EEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred ccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 788999999999 45544321 11 237888899999999999999999998888888876
No 181
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.83 E-value=2.5e-19 Score=138.28 Aligned_cols=167 Identities=17% Similarity=0.234 Sum_probs=108.3
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++|+|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 34 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 113 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLT 113 (282)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCC
Confidence 5789999999999999864 89999643321110 01123455432 2589999999
Q ss_pred cCCCeeEEEEEEcCCCc---c--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 77 VEDSGKYLCVVNNSVGG---E--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
.+|+|.|+|.+.+..|. . ...+.|.|...+......... ....+..+...+....+.+|++
T Consensus 114 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~--------------~~~~~~~~~~~p~~~~v~~G~~ 179 (282)
T 1qok_A 114 SEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSG--------------GGGSENVLTQSPAIMSASPGEK 179 (282)
T ss_dssp GGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC-----------------------------CCCEEEECSEEEECTTCC
T ss_pred hhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCC--------------CCccceEEecCCCEEEEcCCCc
Confidence 99999999999988651 1 123456666533100000000 0001111122244557889999
Q ss_pred EEEEeEeCCCCCceEEEEE--CCccCC-------------C--------CCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 152 AQFTCKYEGNPVKTISWMK--DGKPVP-------------D--------HNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 152 v~l~C~~~~~p~~~~~W~~--~~~~~~-------------~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
++|.|.+.+.+ +.+.|+| ++..+. . .....|.|.++..+|+|.|.|.+.+..
T Consensus 180 v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 180 VTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp EEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCC
Confidence 99999999988 8999999 555431 0 123469999999999999999998753
No 182
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.83 E-value=1.2e-19 Score=131.94 Aligned_cols=122 Identities=22% Similarity=0.516 Sum_probs=100.7
Q ss_pred cCCceEEEecCCCEEEEeEeCCCC-CceEEEEE-CCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNP-VKTISWMK-DGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~-~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
..+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+... ....|.|.++..+|+|.|+|.+.+..+
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (191)
T 1epf_A 7 IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG 86 (191)
T ss_dssp EESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred ecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCC
Confidence 345556889999999999999876 78999999 88776522 346799999999999999999999874
Q ss_pred -CceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 206 -SAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 206 -~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
.....+.+.+. .+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 87 ~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~ 142 (191)
T 1epf_A 87 TQSEATVNVKIF---QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVI 142 (191)
T ss_dssp EEEEEEEEEEEE---CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGG
T ss_pred cceEEEEEEEee---cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEee
Confidence 33445555554 57888777777788999999999999999999999999999885
No 183
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.83 E-value=7.7e-21 Score=140.58 Aligned_cols=160 Identities=20% Similarity=0.321 Sum_probs=105.2
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceEEEE----eeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 85 (267)
....+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.+|+|.|+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYC 86 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEE
Confidence 6789999999999999877 99999643332211 01123444332 3489999999999999999
Q ss_pred EEEcCCCc-c--EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-
Q psy3045 86 VVNNSVGG-E--SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN- 161 (267)
Q Consensus 86 ~~~~~~~~-~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~- 161 (267)
.+.+..+. . .....|.|...+. ..+... ..+....+..|+.+.|.|.+.+.
T Consensus 87 ~~~n~~~~~~~~~~~~~l~V~~~~~--~~p~v~-----------------------~~~~~~~~~~g~~v~L~C~~~g~~ 141 (212)
T 1nfd_E 87 LSSYGDNNDLVFGSGTQLTVLRGPK--SSPKVT-----------------------VFPPSPEELRTNKATLVCLVNDFY 141 (212)
T ss_dssp EEEETTTTEEEECCCEEEEEECCCC--BCCEEE-----------------------CCCCCHHHHHTTEECCCEEEEEEB
T ss_pred EEEcccCcccccCCceEEEEccCCC--CCCEEE-----------------------eeCCchHhccCCceEEEEEEEeeE
Confidence 99963222 1 2223455532111 111111 00111123468999999999887
Q ss_pred CC-ceEEEEECCccCCCCC--------------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 162 PV-KTISWMKDGKPVPDHN--------------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 162 p~-~~~~W~~~~~~~~~~~--------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
|. +.+.|+++|..+.... .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 142 p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 142 PGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp SSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred CCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 54 7999999998765321 1237788888899999999999987653
No 184
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.82 E-value=5.5e-20 Score=142.51 Aligned_cols=165 Identities=16% Similarity=0.127 Sum_probs=116.2
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE-EeeEEEEeecccCCCeeEEEEEEcCCCcc-
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ-VSGTLIIKEAKVEDSGKYLCVVNNSVGGE- 94 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~- 94 (267)
....+.+|+++.|.|.+.+ +.|++++... .....+... .+..|.|.+++..|+|.|+|.+.+..+..
T Consensus 97 ~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 171 (292)
T 4dkd_C 97 QEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRP-----LMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVM 171 (292)
T ss_dssp SEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCC-----CCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEE
T ss_pred CeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCc-----cccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCcee
Confidence 5788999999999999876 8999863211 111222222 23459999999999999999999876653
Q ss_pred EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCC-CceEEEEECCc
Q psy3045 95 SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNP-VKTISWMKDGK 173 (267)
Q Consensus 95 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~~~~ 173 (267)
+..+.|.|..... ..+... ..+....+.+|+.+.|.|.+.+.| ...+.|++++.
T Consensus 172 s~~~~l~V~~~~~--~~p~i~-----------------------~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~ 226 (292)
T 4dkd_C 172 SISIRLKVQKVIP--GPPALT-----------------------LVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNT 226 (292)
T ss_dssp CCCEEEEEECCCC--SSCEEE-----------------------EESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSC
T ss_pred EEEEEEEEeCCCC--CCCeEE-----------------------ccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCc
Confidence 4466777765211 011111 112222456899999999998876 45788889888
Q ss_pred cCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 174 PVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 174 ~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
.+.... ...|.|.++..+|+|.|+|.|.|..|....+..|.|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 227 KLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp CCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred ccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEee
Confidence 664321 24799999999999999999999999877777777653
No 185
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.82 E-value=1.2e-20 Score=138.17 Aligned_cols=115 Identities=16% Similarity=0.266 Sum_probs=93.7
Q ss_pred EEecCCCEEEEeE---eCCCCCceEEEEECCccCCC--------------------------CCCCeEEeccCCCCCCeE
Q psy3045 145 TIDFGRPAQFTCK---YEGNPVKTISWMKDGKPVPD--------------------------HNEPVFRIDSVRKEDKGM 195 (267)
Q Consensus 145 ~~~~g~~v~l~C~---~~~~p~~~~~W~~~~~~~~~--------------------------~~~~~l~i~~~~~~d~g~ 195 (267)
.+..|+.++|.|. +.+.|.+.+.|+|+|..... .+...|.|.++..+|+|.
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 83 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGN 83 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeE
Confidence 6778999999995 56778999999998764321 123579999999999999
Q ss_pred EEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 196 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 196 y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
|+|.|.|..+.....+.|.|. .||.+...+....+.+|+.+.|.|.+.|.|.|.|.|++++..+
T Consensus 84 Y~C~a~n~~g~~~~~~~l~V~---~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 84 YLCRMKLGETEVTKQEHLSVV---KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVE 147 (203)
T ss_dssp EEEEEEETTEEEEEEEEEEEE---EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC----
T ss_pred EEEEEEcCCCcEEEEEEEEec---CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeee
Confidence 999999998888777777775 5777777777778889999999999999999999999876543
No 186
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.82 E-value=1.3e-19 Score=132.27 Aligned_cols=124 Identities=26% Similarity=0.486 Sum_probs=100.5
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.+..+.....
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 92 (197)
T 3lcy_A 13 EMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETS 92 (197)
T ss_dssp CCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEE
T ss_pred cCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEE
Confidence 3445588899999999999888888999999998775432 2379999999999999999999988877777
Q ss_pred EEEEEecccCCCeeec---CCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 211 GELKLGGRFDPPVIKE---SFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 211 ~~l~v~~~~~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
..+.+.. +|.+.. ......+.+|+.+.|.|.+.+.|.|.+.|+++|..+..+.
T Consensus 93 ~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~ 148 (197)
T 3lcy_A 93 SKLLLQA---TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE 148 (197)
T ss_dssp EEEEEEE---EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS
T ss_pred EEEEEEc---CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCC
Confidence 7777753 333322 2345567899999999999999999999999999987654
No 187
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.82 E-value=6.8e-20 Score=139.74 Aligned_cols=177 Identities=16% Similarity=0.251 Sum_probs=102.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccc-------------cCCceEE------EEee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV-------------PLNDRVK------QVSG 68 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~-------------~~~~~~~------~~~~ 68 (267)
+|.+...+ ..+.+.+|++|+|.|.+.+ +.|++...+....... .+..+.. ....
T Consensus 2 s~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 79 (259)
T 3omz_A 2 SSNLEGRT--KSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNL 79 (259)
T ss_dssp -----------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCC
T ss_pred ccccccCC--ceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeE
Confidence 45666666 7899999999999999987 9999853222111000 0111111 1234
Q ss_pred EEEEeecccCCCeeEEEEEEcCCCc---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEE
Q psy3045 69 TLIIKEAKVEDSGKYLCVVNNSVGG---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQT 145 (267)
Q Consensus 69 ~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 145 (267)
+|.|.+++.+|+|.|+|.+.+..+. ......|.|............... .......+...+....
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~------------~~~~~~~v~~~p~~~~ 147 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAA------------KKDGAQKVTQAQSSVS 147 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------------------CEEECCCCCEE
T ss_pred EEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccc------------cccCCeeeEEeCCEEE
Confidence 7999999999999999999987652 233455666543211000000000 0000111223344558
Q ss_pred EecCCCEEEEeEeCCC-CCceEEEEECCc--cC-----------------------CCCCCCeEEeccCCCCCCeEEEEE
Q psy3045 146 IDFGRPAQFTCKYEGN-PVKTISWMKDGK--PV-----------------------PDHNEPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~-p~~~~~W~~~~~--~~-----------------------~~~~~~~l~i~~~~~~d~g~y~C~ 199 (267)
+.+|++++|.|.+.+. +.+.+.|++++. .+ .......|.|.+++.+|+|.|.|.
T Consensus 148 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 227 (259)
T 3omz_A 148 MPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCA 227 (259)
T ss_dssp EETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEE
T ss_pred EcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEE
Confidence 8899999999998775 788999998542 10 001235699999999999999999
Q ss_pred EEcC
Q psy3045 200 IRNE 203 (267)
Q Consensus 200 ~~~~ 203 (267)
+.+.
T Consensus 228 ~~~~ 231 (259)
T 3omz_A 228 LGES 231 (259)
T ss_dssp EESC
T ss_pred EeCc
Confidence 9853
No 188
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.82 E-value=3e-19 Score=137.46 Aligned_cols=174 Identities=18% Similarity=0.275 Sum_probs=109.8
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccc--------cCCceEEEE----eeEEEEeec
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTLIIKEA 75 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l~i~~~ 75 (267)
.+.|...| ..+.+.+|++|+|.|.+.+ +.|+++..+....... ....|+... ..+|.|.++
T Consensus 12 ~~~v~~~p--~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 89 (276)
T 3auv_A 12 DIQMTQSP--SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSL 89 (276)
T ss_dssp CCCEEEEC--SEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceeEEeCC--CeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccC
Confidence 45566655 6889999999999999987 9999964332111100 123344432 248999999
Q ss_pred ccCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 76 KVEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 76 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
+.+|+|.|+|.+.+..+. ......|.|...+........ ...++......+....+.+|++++|
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~---------------~~~~p~~~~~~p~~~~v~~G~~v~L 154 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRS---------------GGGGSEVQLVESGGGLVQPGGSLRL 154 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC--------------------------------CCEEEEECCEEECTTCCEEE
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccc---------------cccCcceEEECCCceEecCCCeEEE
Confidence 999999999999987543 223345665543210000000 0001111111223457889999999
Q ss_pred EeEeCCCC--CceEEEEECC--ccCC------------------C----------CCCCeEEeccCCCCCCeEEEEEEEc
Q psy3045 155 TCKYEGNP--VKTISWMKDG--KPVP------------------D----------HNEPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 155 ~C~~~~~p--~~~~~W~~~~--~~~~------------------~----------~~~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
.|.+.+.+ .+.+.|++++ ..+. . .....|.|.++..+|+|.|.|.+.|
T Consensus 155 ~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 234 (276)
T 3auv_A 155 SCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFV 234 (276)
T ss_dssp EEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEc
Confidence 99998876 5899999963 1110 0 0123799999999999999999999
Q ss_pred C
Q psy3045 203 E 203 (267)
Q Consensus 203 ~ 203 (267)
.
T Consensus 235 ~ 235 (276)
T 3auv_A 235 F 235 (276)
T ss_dssp S
T ss_pred C
Confidence 7
No 189
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.82 E-value=3.3e-19 Score=135.70 Aligned_cols=173 Identities=21% Similarity=0.349 Sum_probs=104.2
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceeccc--------cCCceEEEE----eeEEEEeecccCCCeeE
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l~i~~~~~~d~G~Y 83 (267)
....+.+|++|+|.|.+.+ +.|++...+....... ....|+... ..+|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 4689999999999999864 9999964332211110 122344332 24799999999999999
Q ss_pred EEEEEcCCCcc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 84 LCVVNNSVGGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 84 ~C~~~~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
+|.+.+..+.. ...+.|.|...+.......... .+.............+....+.+|++++|.|.+.+
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 160 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVY---------YTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASG 160 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC-------------------------------CCEEEEECCEEECTTCCEEEEEEEES
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeE---------EeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeC
Confidence 99999865432 2335566655332111000000 00000000000011122336889999999999988
Q ss_pred CC--CceEEEEECC--ccCC----------------------------CCCCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 161 NP--VKTISWMKDG--KPVP----------------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 161 ~p--~~~~~W~~~~--~~~~----------------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
.+ .+.+.|++++ ..+. ......|.|.+++.+|+|.|.|.|.+..
T Consensus 161 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 161 FTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 76 7899999863 2210 0122459999999999999999999864
No 190
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.82 E-value=1.5e-19 Score=131.35 Aligned_cols=124 Identities=25% Similarity=0.421 Sum_probs=102.6
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCc-eEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESA-QAS 210 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~ 210 (267)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... +...|.|.+++.+|+|.|+|.+.+..+.. ...
T Consensus 13 ~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (192)
T 2iep_A 13 PLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESC 92 (192)
T ss_dssp CCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEE
T ss_pred CccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeE
Confidence 344557889999999999998888899999999887542 23569999999999999999999987663 445
Q ss_pred EEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 211 GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 211 ~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
..+.+. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+.
T Consensus 93 ~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 145 (192)
T 2iep_A 93 GALQVK---MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENS 145 (192)
T ss_dssp EEEEEE---EEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCS
T ss_pred EEEEEE---eCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCC
Confidence 566665 46777777777789999999999999999999999999999887653
No 191
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.82 E-value=3.6e-20 Score=138.00 Aligned_cols=163 Identities=17% Similarity=0.231 Sum_probs=107.9
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCccee---------------ccccCCceEEEE------eeEEEEee
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRK---------------VAVPLNDRVKQV------SGTLIIKE 74 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~---------------~~~~~~~~~~~~------~~~l~i~~ 74 (267)
..+.+.+|++++|.|.+.+ +.|+++..+.... ....+..|+... +.+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 4568999999999999874 9999964332111 001123455443 35899999
Q ss_pred cccCCCeeEEEEEEcCCC-----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC
Q psy3045 75 AKVEDSGKYLCVVNNSVG-----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG 149 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g 149 (267)
++.+|+|.|+|.+.+..+ .....+.|.|...+ ...|.... . +....+..|
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~----------------------~-~~~~~~~~g 142 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK--TTPPSVYP----------------------L-APGSAAQTN 142 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC--CBCCEEEE----------------------E-CCCSCCCCS
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC--CCCCeEEE----------------------c-cccccccCC
Confidence 999999999999988654 11233456665411 11111110 0 001124569
Q ss_pred CCEEEEeEeCCC-CCc-eEEEEECCccCCCC-------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 150 RPAQFTCKYEGN-PVK-TISWMKDGKPVPDH-------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 150 ~~v~l~C~~~~~-p~~-~~~W~~~~~~~~~~-------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+.+.|.|.+.+. |.+ .+.|++++..+... . .+.|.|..+..+| |.|+|.|.|..+......
T Consensus 143 ~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 143 SMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp SEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 999999999986 877 99999998775321 1 1357888888889 999999999887654433
No 192
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=7.7e-19 Score=132.29 Aligned_cols=158 Identities=19% Similarity=0.301 Sum_probs=105.7
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceecc--------ccCCceEEEE----eeEEEEeecccCCCe
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKVA--------VPLNDRVKQV----SGTLIIKEAKVEDSG 81 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~--------~~~~~~~~~~----~~~l~i~~~~~~d~G 81 (267)
..+.+.+|++|+|.|.+.+ +.|+++..+...... .....|+... ..+|.|.+++.+|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (240)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCE
Confidence 6789999999999999754 899996432211110 0123344432 237999999999999
Q ss_pred eEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCC
Q psy3045 82 KYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEG 160 (267)
Q Consensus 82 ~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 160 (267)
.|+|.+.+..+. ......|.|...+...... .....+....+.+|+++.|.|.+.+
T Consensus 89 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~-----------------------~~~~~~~~~~v~~G~~v~L~C~~~g 145 (240)
T 1moe_A 89 TYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGE-----------------------VQLQQSGAELVEPGASVKLSCTASG 145 (240)
T ss_dssp EEEEEECSSSSCCBCCCEEEEECCCSCCCCCC-----------------------CEEEECCCEEECTTCCEEEEEEEES
T ss_pred EEEEEEccCCceeecCCEEEEEecCCCCCCce-----------------------EEEeCCCceEEeCCCcEEEEEEEcC
Confidence 999999987654 3344566665432100000 0111123347888999999999998
Q ss_pred CC--CceEEEEEC--CccCC----------------------------CCCCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 161 NP--VKTISWMKD--GKPVP----------------------------DHNEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 161 ~p--~~~~~W~~~--~~~~~----------------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
.| .+.+.|+++ +..+. ......|.|.+++.+|+|.|.|.|.+.
T Consensus 146 ~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 146 FNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp SCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred ccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 87 459999996 22210 011246999999999999999999853
No 193
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.82 E-value=4.5e-20 Score=137.13 Aligned_cols=160 Identities=21% Similarity=0.315 Sum_probs=104.1
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLK 87 (219)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCC
Confidence 5678999999999999874 99999743321110 01123455442 3589999999
Q ss_pred cCCCeeEEEEEEcCCCcc----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE
Q psy3045 77 VEDSGKYLCVVNNSVGGE----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA 152 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v 152 (267)
.+|+|.|+|.+.+..+.. ...+.|.|..... ..+.... . +....+..|+.+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~----------------------~-~~~~~~~~g~~v 142 (219)
T 1c1e_H 88 NEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKT--TPPSVYP----------------------L-APGSAAQTNSMV 142 (219)
T ss_dssp GGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCC--BCCEEEE----------------------E-CCCSSSCCSSEE
T ss_pred cccCEEEEEEEeccCcccceeecCceEEEEecCCC--CCCeEEE----------------------e-cCccccccCCeE
Confidence 999999999999876321 1234555554210 1111110 0 001134579999
Q ss_pred EEEeEeCC-CCCc-eEEEEECCccCCCC--------C----CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 153 QFTCKYEG-NPVK-TISWMKDGKPVPDH--------N----EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 153 ~l~C~~~~-~p~~-~~~W~~~~~~~~~~--------~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.|.|.+.+ .|.+ .+.|++++..+... . .+.|.|..... |.|.|+|.|.|..+...
T Consensus 143 ~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~ 211 (219)
T 1c1e_H 143 TLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTK 211 (219)
T ss_dssp EEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEE
T ss_pred EEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCcc
Confidence 99999998 7888 99999998764210 1 12577744443 56999999999876544
No 194
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.82 E-value=2.3e-19 Score=135.46 Aligned_cols=170 Identities=19% Similarity=0.251 Sum_probs=105.8
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccc--------cCCceEEEE----eeEEEEeecccC
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTLIIKEAKVE 78 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l~i~~~~~~ 78 (267)
+...| ..+.+.+|++|+|.|.+.+ +.|+++..+....... ....|+... ..+|.|.+++.+
T Consensus 4 v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 4 LTQSP--ATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp EEEEC--SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEEcC--CeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 44444 6789999999999999987 9999964322111100 123344432 348999999999
Q ss_pred CCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 79 DSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 79 d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
|+|.|+|.+.+..+. ....+.|.|..++........ ....+..+ ..+....+.+|++++|.|.
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~---------------~~~~~~~~-~~~~~~~v~~G~~v~L~C~ 145 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSG---------------GGGSDIQL-QESGPSLVKPSQTLSLTCS 145 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------------CCEE-EEECCSEECTTSCEEEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCccccc---------------ccccceee-ecCCcceecCCCeEEEEEE
Confidence 999999999987543 123345666543320000000 00000000 1111225888999999999
Q ss_pred eCCCC--CceEEEEECC--ccC------------------C---------CCCCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 158 YEGNP--VKTISWMKDG--KPV------------------P---------DHNEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 158 ~~~~p--~~~~~W~~~~--~~~------------------~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
+.+.+ .+.+.|++++ ..+ . ......|.|.++..+|+|.|.|.|.+.
T Consensus 146 ~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 146 VTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 98875 5789999853 221 0 011247999999999999999999874
No 195
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.82 E-value=6.5e-19 Score=127.91 Aligned_cols=116 Identities=24% Similarity=0.416 Sum_probs=99.0
Q ss_pred EEEec-CCCEEEEeEeCCCCC--ceEEEEECCccCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 144 QTIDF-GRPAQFTCKYEGNPV--KTISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 144 ~~~~~-g~~v~l~C~~~~~p~--~~~~W~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
..+.+ |+.+.|.|.+.+.|. +.+.|++++..+... ....|.|.++..+|+|.|+|.+.|. +.......+.|.
T Consensus 12 ~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~ 90 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVK 90 (190)
T ss_dssp EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEe
Confidence 35556 999999999988876 799999999888654 3467999999999999999999998 666667777776
Q ss_pred cccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEE--CCEEcC
Q psy3045 217 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL--DGKKLV 263 (267)
Q Consensus 217 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~~~~l~ 263 (267)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ +|..+.
T Consensus 91 ---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 91 ---AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp ---CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred ---cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 57888877777889999999999999999999999999 787663
No 196
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.81 E-value=5.3e-19 Score=129.57 Aligned_cols=160 Identities=19% Similarity=0.295 Sum_probs=105.8
Q ss_pred eeEEecCCCeEEEEEEec----c-----eeeeecccCccee------ccccCCceEEE---EeeEEEEeecccCCCeeEE
Q psy3045 23 IRFKKPGGESFALLCEAQ----E-----NMWFKFIEGSSRK------VAVPLNDRVKQ---VSGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~----~-----~~W~~~~~~~~~~------~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~ 84 (267)
.++.+.+|+++.|.|.+. + +.|++++...... ....+..|... .+.+|.|.+++.+|+|.|+
T Consensus 2 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 2 IHVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp CEEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEE
T ss_pred ceEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEE
Confidence 367899999999999995 2 8888853211000 00112223322 2458999999999999999
Q ss_pred EEEEcCCCcc-----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 85 CVVNNSVGGE-----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 85 C~~~~~~~~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
|.+.+..+.. ...+.|.|...+. .+.... .....|+.+.|.|.+.
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~---~p~~~~---------------------------~~~~~g~~~~l~C~~~ 131 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFP---TPSISD---------------------------FEIPTSNIRRIICSTS 131 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCC---CCEEEE---------------------------EECSSTTEEEEEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCC---CCceEe---------------------------ccCCCCCeEEEEEecC
Confidence 9999977653 2455666654321 111110 0224478899999995
Q ss_pred -CCCCceEEEEECCccCCCC--------CCCeE---EeccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 160 -GNPVKTISWMKDGKPVPDH--------NEPVF---RIDSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 160 -~~p~~~~~W~~~~~~~~~~--------~~~~l---~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
+.|.|.+.|+++|..+... .+..+ .+..+..+|.|.|+|.|.|..+.....+.
T Consensus 132 ~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 132 GGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 8899999999999887632 11211 22344568999999999999887665544
No 197
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=137.30 Aligned_cols=148 Identities=18% Similarity=0.289 Sum_probs=111.1
Q ss_pred eeEEecCCCeEEEEEEec-c-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEE
Q psy3045 23 IRFKKPGGESFALLCEAQ-E-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESV 96 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~-~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (267)
....+.+|+++.|.|.+. + +.|++++... .....+..|.|.+++.+|+|.|+|.+.+..+..+.
T Consensus 90 ~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~----------~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~ 159 (262)
T 3rjd_A 90 SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAF----------KFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSA 159 (262)
T ss_dssp SCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEE----------EEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEE
T ss_pred CCeEEecCCeEEEEEEccCCCCCceEEEEECCccc----------cccCCCCeEEEEECChhhCEEEEEEEeCCCCcccc
Confidence 456788999999999994 3 9999953211 11223568999999999999999999998877777
Q ss_pred EEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCC-c----eEEEEEC
Q psy3045 97 ETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV-K----TISWMKD 171 (267)
Q Consensus 97 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~----~~~W~~~ 171 (267)
.+.|.|..... .+... ..+ ...+.+|+.+.|.|.+.+.|. + .+.|+++
T Consensus 160 ~~~l~V~~~~~---~p~~~-----------------------~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~ 212 (262)
T 3rjd_A 160 GISVTVKELFP---APVLN-----------------------ASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMG 212 (262)
T ss_dssp CEEEEEECSSC---CCEEE-----------------------ESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEET
T ss_pred ceEEEeccCCC---CCeEe-----------------------ecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeC
Confidence 77888775321 01110 001 124778999999999998875 4 4789999
Q ss_pred CccCCC-CCCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 172 GKPVPD-HNEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 172 ~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+..+.. .....|.|..+..+|+|.|+|.|.|..|..
T Consensus 213 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 213 SKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp TEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred CcEecccCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 987753 345789999999999999999999998865
No 198
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=138.66 Aligned_cols=171 Identities=23% Similarity=0.323 Sum_probs=109.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceec-----------cccCC-ceEEEE-----eeEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKV-----------AVPLN-DRVKQV-----SGTLI 71 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~-----------~~~~~-~~~~~~-----~~~l~ 71 (267)
.+.+...+ ..+.+.+|++|+|.|.+.. +.|++...+..... ..... .|+... +.+|.
T Consensus 26 ~~~v~~~p--~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (268)
T 3pl6_D 26 GAGVSQTP--SNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLK 103 (268)
T ss_dssp -SSCBCCC--SEEEEETTCCEEEEEBCBTTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEE
T ss_pred CceeEeCC--CEEEecCCCCEEEEEEeCCCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEE
Confidence 45566555 6889999999999999876 99999433221110 00111 444432 45899
Q ss_pred EeecccCCCeeEEEEEEcCC--CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC
Q psy3045 72 IKEAKVEDSGKYLCVVNNSV--GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG 149 (267)
Q Consensus 72 i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g 149 (267)
|.+++.+|+|.|+|.+.+.. ........|.|.........|... ...+....+..|
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~----------------------~~~~~~~~~~~g 161 (268)
T 3pl6_D 104 IQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVA----------------------VFEPSEAEISHT 161 (268)
T ss_dssp ECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEE----------------------EECCCHHHHHHH
T ss_pred ECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceE----------------------EeCCCcccccCC
Confidence 99999999999999999742 223334456666422211122211 011111234558
Q ss_pred CCEEEEeEeCCCCCc--eEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEEEcCCCC
Q psy3045 150 RPAQFTCKYEGNPVK--TISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVIRNEQES 206 (267)
Q Consensus 150 ~~v~l~C~~~~~p~~--~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~~~~~~~ 206 (267)
+.++|.|.+.+.+++ .+.|+++|..+... .. +.|.+.....+| .|.|+|.|.|....
T Consensus 162 ~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 162 QKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 999999999886543 89999999877431 11 335666666666 99999999997644
Q ss_pred c
Q psy3045 207 A 207 (267)
Q Consensus 207 ~ 207 (267)
.
T Consensus 242 ~ 242 (268)
T 3pl6_D 242 E 242 (268)
T ss_dssp T
T ss_pred C
Confidence 3
No 199
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.81 E-value=4.2e-19 Score=132.28 Aligned_cols=163 Identities=16% Similarity=0.216 Sum_probs=107.0
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 4678999999999999874 89999643322111 11134565543 3589999999
Q ss_pred cCCCeeEEEEEEcCCCc------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCC
Q psy3045 77 VEDSGKYLCVVNNSVGG------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGR 150 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~ 150 (267)
.+|+|.|+|.+.+..+. ....+.|.|...+ ...|..... .+. ..+..|+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~~~----------------------~~~-~~~~~g~ 142 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS--ASAPTLFPL----------------------VSC-ENSNPSS 142 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC--CBCCEEEEE----------------------ECT-TCCCSSS
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCC--CCCCEEEEe----------------------cCC-cccCCCC
Confidence 99999999999986531 1123456665311 011111100 000 1245789
Q ss_pred CEEEEeEeCCC-CCc-eEEEEE-CCccCCC---------CC----CCeEEeccCCC--CCCeEEEEEEEcCCCCceEE
Q psy3045 151 PAQFTCKYEGN-PVK-TISWMK-DGKPVPD---------HN----EPVFRIDSVRK--EDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 151 ~v~l~C~~~~~-p~~-~~~W~~-~~~~~~~---------~~----~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~~~ 210 (267)
.+.|.|.+.+. |.+ .+.|++ +|..+.. +. .+.|.|..... +|.|.|+|.|.|..+.....
T Consensus 143 ~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 143 TVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp EEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred cEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 99999999887 766 999999 8887743 11 13467766665 78899999999998765543
No 200
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.81 E-value=9.5e-20 Score=136.16 Aligned_cols=165 Identities=18% Similarity=0.229 Sum_probs=102.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++|+|.|.+.+ +.|+++..+...... ..+..|+... +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 5778999999999999864 999997433221100 0123455432 4589999999
Q ss_pred cCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 77 VEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
.+|+|.|+|.+.+..+. ....+.|.|.... ...+... ...+ ...+..|+.++|.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~----------------------~~~~-~~~~~~g~~v~L~ 142 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYWGQGTLVTVSAAK--TTAPSVY----------------------PLAP-VCGDTSGSSVTLG 142 (227)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECSSC--CBCCEEE----------------------EECC-CC------CEEEE
T ss_pred cccCEEEEEEECCCCceEEcCcEEEEEcCCC--CCCCEEE----------------------EecC-CccccCCCcEEEE
Confidence 99999999999875321 1123456665311 0111111 0001 1135579999999
Q ss_pred eEeCCC-CCc-eEEEEECCccCCC--C----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 156 CKYEGN-PVK-TISWMKDGKPVPD--H----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 156 C~~~~~-p~~-~~~W~~~~~~~~~--~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
|.+.+. |.+ .+.|++++..+.. . ..+.|.|.....+| |.|+|.|.|..........+
T Consensus 143 C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 213 (227)
T 1mju_H 143 CLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 213 (227)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEe
Confidence 999886 666 9999999876421 0 12357888888777 99999999976554444433
No 201
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.81 E-value=4.1e-21 Score=144.12 Aligned_cols=166 Identities=17% Similarity=0.289 Sum_probs=87.8
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceec--------cccCCceE----EEEeeEEEEeec
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKV--------AVPLNDRV----KQVSGTLIIKEA 75 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~--------~~~~~~~~----~~~~~~l~i~~~ 75 (267)
.+.+...| ..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+ ...+.+|.|.++
T Consensus 23 ~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 100 (233)
T 3bqu_C 23 ETTVTQSP--ASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENM 100 (233)
T ss_dssp CCCEEEEC--SBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC----
T ss_pred ceeEEEcC--CeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCC
Confidence 34455445 6788999999999999877 99998643321100 00111222 223458999999
Q ss_pred ccCCCeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 76 KVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 76 ~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
+.+|+|.|+|.+.+..+.. .....|.|..... .+... .. +....+..|+.++|
T Consensus 101 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~---~p~v~----------------------~~-~~~~~~~~g~~v~L 154 (233)
T 3bqu_C 101 LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADA---APTVS----------------------IF-PPSSEQLTSGGASV 154 (233)
T ss_dssp -CCCCSEEEEEECSSSSCCBCCCCBC---CCCB---CCEEE----------------------EE-CCCHHHHHTTEEEE
T ss_pred CHHHCEEEEEEEecCCceeecCCEEEEEeCCCC---CCEEE----------------------Ee-CCCHHhhcCCceEE
Confidence 9999999999998865432 2223344433110 11111 00 00012235899999
Q ss_pred EeEeCCC-CCc-eEEEEECCccCCCC----------CC------CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 155 TCKYEGN-PVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 155 ~C~~~~~-p~~-~~~W~~~~~~~~~~----------~~------~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.|.+.+. |.+ .+.|+++|..+... .. +.|.|.....+|.|.|+|.|.|....
T Consensus 155 ~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 155 VCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 9999885 443 89999999876433 11 25778888888999999999997543
No 202
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.80 E-value=1.4e-18 Score=125.91 Aligned_cols=119 Identities=22% Similarity=0.485 Sum_probs=96.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEE-CCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCc-eE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMK-DGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESA-QA 209 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~-~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~ 209 (267)
+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+.... ...|.|.++..+|+|.|+|.+.+..+.. ..
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 87 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEE
T ss_pred CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEE
Confidence 44558899999999999988877 899999 777665432 2489999999999999999999987765 34
Q ss_pred EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 210 SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 210 ~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
...+.+. .+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 88 ~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 138 (189)
T 2v44_A 88 TVVLEIY---QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 138 (189)
T ss_dssp EEEEEEE---CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CE
T ss_pred EEEEEEe---cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEe
Confidence 5556654 56777766677789999999999999999999999999998774
No 203
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.80 E-value=2.3e-19 Score=135.70 Aligned_cols=169 Identities=22% Similarity=0.303 Sum_probs=108.1
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCccee-------------ccccCCceEEEE-----eeEEEE
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRK-------------VAVPLNDRVKQV-----SGTLII 72 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~-------------~~~~~~~~~~~~-----~~~l~i 72 (267)
+...+ ..+.+.+|++|+|.|.+.+ +.|++...+.... .......|+... +.+|.|
T Consensus 4 v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 4 VSQHP--SWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp EEEEC--SEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred cEECC--cEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 44444 6789999999999999888 9999842221110 011122444432 348999
Q ss_pred eecccCCCeeEEEEEEcCCCc----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 73 KEAKVEDSGKYLCVVNNSVGG----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 73 ~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+++.+|+|.|+|.+.+..+. ....+.|.|.........+... ...+....+..
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~----------------------~~~~~~~~~~~ 139 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVA----------------------VFEPSEAEISH 139 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEE----------------------EECCCHHHHHH
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceE----------------------eecCCchhccC
Confidence 999999999999999875431 1233456665421111122111 01111223456
Q ss_pred CCCEEEEeEeCCCCCc--eEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEEEcCCC
Q psy3045 149 GRPAQFTCKYEGNPVK--TISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVIRNEQE 205 (267)
Q Consensus 149 g~~v~l~C~~~~~p~~--~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~~~~~~ 205 (267)
|+.+.|.|.+.+.+++ .+.|+++|..+... .. +.|.|.....+| .|.|+|.|.|...
T Consensus 140 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 140 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 219 (246)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCC
Confidence 8999999999887544 89999999877532 11 236777777777 9999999999765
Q ss_pred Cce
Q psy3045 206 SAQ 208 (267)
Q Consensus 206 ~~~ 208 (267)
...
T Consensus 220 ~~~ 222 (246)
T 4dzb_B 220 SEN 222 (246)
T ss_dssp CTT
T ss_pred CCc
Confidence 433
No 204
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.80 E-value=1.9e-18 Score=127.09 Aligned_cols=121 Identities=17% Similarity=0.249 Sum_probs=93.6
Q ss_pred eEEEecCCCEEEEeEeCC-CCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 143 VQTIDFGRPAQFTCKYEG-NPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+..+.+|+.+.|.|.+.+ .|.+.+.|++||.++..+. ...|.|.++..+|+|.|+|.|.| +.....
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~ 88 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNH 88 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEE
Confidence 347889999999999864 6899999999999885432 12689999999999999999999 444444
Q ss_pred EEEEEecc------------------cCCCeeecCCceeEEecCCcEEEEEEeecC-CCCcEEEEECCEEcCCCC
Q psy3045 211 GELKLGGR------------------FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 211 ~~l~v~~~------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~l~~~~ 266 (267)
..+.+... ..+|.+.... ...+.+|+.+.|.|.+.|. |.|.|.|+|||+.|..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 89 STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC
T ss_pred EEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC
Confidence 43322100 0256665544 4678999999999999998 899999999999997653
No 205
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.80 E-value=8.4e-19 Score=130.39 Aligned_cols=160 Identities=21% Similarity=0.308 Sum_probs=107.0
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... .....|+... +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 4688999999999999863 899996433221110 1123555543 3589999999
Q ss_pred cCCCeeEEEEEEcCCCc---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 77 VEDSGKYLCVVNNSVGG---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
.+|+|.|+|.+.+..+. ....+.|.|...+. ..|..... + ...+..|+.++
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~--~~P~v~~~-----------------------~-~~~~~~g~~v~ 141 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESA--RNPTIYPL-----------------------T-LPPALSSDPVI 141 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC--BCCEEEEE-----------------------C-CCSSSCCSSEE
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCC--CCCEEEEe-----------------------e-cccccCCCcEE
Confidence 99999999999986542 11234566654211 11111100 0 11345799999
Q ss_pred EEeEeCCC-CC--ceEEEEECCccCC---------CCCC----CeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 154 FTCKYEGN-PV--KTISWMKDGKPVP---------DHNE----PVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 154 l~C~~~~~-p~--~~~~W~~~~~~~~---------~~~~----~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
|.|.+.+. |. +.+.|++++..+. .+.. +.|.|.....+|.|.|+|.|.|..+..+
T Consensus 142 L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 142 IGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 99999886 65 7999999987652 1111 2478888888899999999999987654
No 206
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.80 E-value=1.8e-19 Score=136.83 Aligned_cols=166 Identities=20% Similarity=0.319 Sum_probs=107.4
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc----------eeeeecccCcceec--------cccCCceEEEE----eeEEE
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKV--------AVPLNDRVKQV----SGTLI 71 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~--------~~~~~~~~~~~----~~~l~ 71 (267)
+.+...+ ..+.+.+|++|+|.|.+.+ +.|++++.+..... ......|+... +.+|.
T Consensus 35 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 35 VLMTQTP--LSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp CCEEEEC--SEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cEEEeCC--ceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 4455445 6889999999999999853 78999643322110 01123444332 24899
Q ss_pred EeecccCCCeeEEEEEEcCCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCC
Q psy3045 72 IKEAKVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGR 150 (267)
Q Consensus 72 i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~ 150 (267)
|.+++.+|+|.|+|.+.+..+.. .....|.|..... .+.... . +....+..|+
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~---~P~v~~----------------------~-~~~~~~~~g~ 166 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADA---APTVSI----------------------F-PPSSEQLTSG 166 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCB---CCEEEE----------------------E-CCCHHHHHHT
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCc---CcEEEE----------------------e-CCChhhcCCC
Confidence 99999999999999998875431 2224455543110 111110 0 0001233588
Q ss_pred CEEEEeEeCCC-CCc-eEEEEECCccCCCC----------CC------CeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 151 PAQFTCKYEGN-PVK-TISWMKDGKPVPDH----------NE------PVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 151 ~v~l~C~~~~~-p~~-~~~W~~~~~~~~~~----------~~------~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
.++|.|.+.+. |.+ .+.|+++|..+... .. ..|.|..+..+|.|.|+|.|.|.....
T Consensus 167 ~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 167 GASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 99999999884 443 89999999876432 11 247888888889999999999987543
No 207
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.80 E-value=9.7e-20 Score=134.48 Aligned_cols=160 Identities=16% Similarity=0.235 Sum_probs=104.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
....+.+|++++|.|.+.+ +.|+++..+..... ......|+... ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 4568999999999999874 99999643322110 00123455432 24899999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
+|+|.|+|.+.+.. .......|.|.... ...+.... . +....+..|+.+.|.|.
T Consensus 88 ~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~--~~~P~v~~----------------------~-~~~~~~~~g~~v~L~C~ 141 (210)
T 3d9a_H 88 EDTATYYCANWDGD-YWGQGTLVTVSAAK--TTPPSVYP----------------------L-APGSAAQTNSMVTLGCL 141 (210)
T ss_dssp GGCEEEEEEETTSS-CBCCCEEEEECCCC--CBCCEEEE----------------------E-CCTTSCCCSSEEEEEEE
T ss_pred ccCEEEEEEEecCc-ccccceEEEeccCC--CCCCEEEE----------------------e-cCCcccccCCcEEEEEE
Confidence 99999999998753 11223455554311 01111110 0 00113457999999999
Q ss_pred eCCC-CCc-eEEEEECCccCCCC------------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 158 YEGN-PVK-TISWMKDGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 158 ~~~~-p~~-~~~W~~~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+.+. |.+ .+.|++++..+... ..+.|.|.....++ |.|+|.|.|..+....
T Consensus 142 ~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 142 VKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred EeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 9987 777 99999998764210 12347788877766 9999999998876543
No 208
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.80 E-value=9.1e-19 Score=126.88 Aligned_cols=125 Identities=27% Similarity=0.519 Sum_probs=92.8
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.+..+.......
T Consensus 9 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 88 (189)
T 2v5t_A 9 VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRD 88 (189)
T ss_dssp CSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEE
T ss_pred CCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEE
Confidence 44558899999999999998898999999998776531 2467999999999999999999988755443333
Q ss_pred EEEecccCCCeeecCCc--eeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 213 LKLGGRFDPPVIKESFS--DETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 213 l~v~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+.+. .+|.+..... ...+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+.
T Consensus 89 ~~l~v~-~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~ 143 (189)
T 2v5t_A 89 IIVIVN-VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE 143 (189)
T ss_dssp EEEEEE-EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS
T ss_pred EEEEec-CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC
Confidence 333322 3455554443 3466789999999999999999999999999887553
No 209
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.80 E-value=1.7e-18 Score=127.78 Aligned_cols=118 Identities=19% Similarity=0.301 Sum_probs=94.1
Q ss_pred CCCEEEEeEeCCC-CCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec-
Q psy3045 149 GRPAQFTCKYEGN-PVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG- 217 (267)
Q Consensus 149 g~~v~l~C~~~~~-p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~- 217 (267)
++.+.|.|.+.+. |.+.+.|++++..+..... ..|.|.++..+|+|.|+|.+.|..+....+..+.+..
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~ 96 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAY 96 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHH
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeec
Confidence 7888999999886 5889999999988865432 3499999999999999999999877666555554321
Q ss_pred -----------------ccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 218 -----------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 218 -----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
...++.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~ 162 (212)
T 2r15_A 97 DEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD 162 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS
T ss_pred cchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC
Confidence 0134445555666789999999999999999999999999999987654
No 210
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.80 E-value=6.2e-19 Score=134.85 Aligned_cols=151 Identities=17% Similarity=0.162 Sum_probs=110.1
Q ss_pred eeEEecCCCeEEEEEEecc---eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCC-CccE---
Q psy3045 23 IRFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSV-GGES--- 95 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~--- 95 (267)
....+.+|+.+.|.|.+.. +.| ++... .... ....|.|..+..+|.|.|+|.+.|.. |...
T Consensus 106 ~~~~v~~G~~v~l~C~~~p~~~i~W--~g~~~------~~~~----~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s 173 (265)
T 2oz4_A 106 TKPEVSEGTEVTVKCEAHPRAKVTL--NGVPA------QPLG----PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN 173 (265)
T ss_dssp SCSEEETTCEEEEEEECCTTSEEEE--SSCSS------SCCS----SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEE
T ss_pred CCceecCCCcEEEEEEccCCCEEEE--CCEEc------cCCC----CcEEEEEccccccCCceEEEEEEcCCCCCccccc
Confidence 3456889999999999977 999 32211 1111 23468899999999999999998654 5543
Q ss_pred EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccC
Q psy3045 96 VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV 175 (267)
Q Consensus 96 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~ 175 (267)
..+.|.|..++...... .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+
T Consensus 174 ~~~~l~V~~~p~~~~~~---------------------------~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~ 226 (265)
T 2oz4_A 174 QTRELRVLYGPRLDERD---------------------------CPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 226 (265)
T ss_dssp EEEEEEEEEEEECCGGG---------------------------SCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE
T ss_pred ccEEEEEEeCCcccccc---------------------------CCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc
Confidence 66777777655433221 122337888999999999999999999999999833
Q ss_pred CCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 176 PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 176 ~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
... ..+ ..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 227 ~~~--g~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 227 LPI--GES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CCT--TSC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCC--CcE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 222 222 2477899999999999999888888877775
No 211
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.80 E-value=7.8e-19 Score=128.20 Aligned_cols=116 Identities=20% Similarity=0.313 Sum_probs=82.6
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCC--------CCCCeEEeccCCCCCCeEEEEEEEcCCCCc--eEEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQESA--QASGELK 214 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~~l~ 214 (267)
.+.+|++++|.|.+.+.|. .+.|+|++..+.. .....|.|.+++.+|+|.|+|.+.|..+.. ...+.|.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~ 93 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELV 93 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEE
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEE
Confidence 6889999999999988765 9999999987742 245689999999999999999999876533 2345666
Q ss_pred EecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 215 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 215 v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
|.....+|.+...+. ..+.+|+.++|.|.+.+.| +.+.|+|+|..+.
T Consensus 94 V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~ 140 (196)
T 2d3v_A 94 VTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKL 140 (196)
T ss_dssp EECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CC
T ss_pred ecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCccc
Confidence 665444677766543 4788999999999999998 8999999998764
No 212
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.79 E-value=2.3e-19 Score=133.38 Aligned_cols=162 Identities=19% Similarity=0.239 Sum_probs=106.1
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec---------------cccCCceEEEE------eeEEEEee
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV---------------AVPLNDRVKQV------SGTLIIKE 74 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~---------------~~~~~~~~~~~------~~~l~i~~ 74 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ...+..|+... ..+|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 5678999999999999874 99999643321100 01123455432 24899999
Q ss_pred cccCCCeeEEEEEEcCCCcc-E--EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 75 AKVEDSGKYLCVVNNSVGGE-S--VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~~~-~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
++.+|+|.|+|.+.+..+.. . ..+.|.|.... ...|.... . +....+.+|+.
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~----------------------~-~~~~~~~~g~~ 142 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT--TTAPSVYP----------------------L-VPGCSDTSGSS 142 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC--CBCCEEEE----------------------E-CCCSCCSCSSS
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCC--CCCCeEEE----------------------c-ccccccCCCCc
Confidence 99999999999999875321 1 23455555311 01111110 0 00113467999
Q ss_pred EEEEeEeCCC-CCc-eEEEEECCccC-----CC---C----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 152 AQFTCKYEGN-PVK-TISWMKDGKPV-----PD---H----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 152 v~l~C~~~~~-p~~-~~~W~~~~~~~-----~~---~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+.|.|.+.+. |.+ .+.|++++... .. . ..+.|.|.....++ |.|+|.|.|..+..+.+
T Consensus 143 v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 143 VTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp EEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 9999999987 878 99999988641 11 0 12457787777766 99999999998865544
No 213
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.79 E-value=1.6e-19 Score=134.34 Aligned_cols=163 Identities=22% Similarity=0.288 Sum_probs=110.0
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCccee-------ccccCCceEEE---------EeeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRK-------VAVPLNDRVKQ---------VSGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~-------~~~~~~~~~~~---------~~~~l~i~~~~ 76 (267)
..+.+.+|+++.|.|.+.+ +.|++++...... .......|+.. .+.+|.|.+++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 4667889999999999832 7899963211100 00001233322 34589999999
Q ss_pred cCCCeeEEEEEEcCC-CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE-EE
Q psy3045 77 VEDSGKYLCVVNNSV-GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA-QF 154 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v-~l 154 (267)
.+|+|.|+|.+.+.. +.....+.|.|..+|.....+. . ....|+.+ .|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~----------------------------~--~~~~g~~~~~l 136 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQ----------------------------K--VQLTGEPVPMA 136 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEE----------------------------C--CCCCSSSCCEE
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecC----------------------------C--cccCCceEEEE
Confidence 999999999999876 5566666776665333221100 0 11457888 59
Q ss_pred EeEeC-CCCCceEEEEECCccCCC-------C-----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 155 TCKYE-GNPVKTISWMKDGKPVPD-------H-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 155 ~C~~~-~~p~~~~~W~~~~~~~~~-------~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
.|.+. +.|.+.+.|++++..... . ..+.|.|.....+|.|.|+|.|.|........+.+..
T Consensus 137 ~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 137 RCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp EEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred EEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 99977 788899999987543221 0 1246889999999999999999999876655554443
No 214
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.79 E-value=2.3e-18 Score=130.30 Aligned_cols=165 Identities=18% Similarity=0.296 Sum_probs=102.6
Q ss_pred eeEEecCCCeEEEEEEecc----------eeeeecccCcceeccc--------cCCceEEEE----eeEEEEeecccCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTLIIKEAKVEDS 80 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l~i~~~~~~d~ 80 (267)
..+.+.+|++|+|.|.+.+ +.|+++..+....... ....|+... ..+|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 88 (247)
T 1svz_A 9 LYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (247)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHC
Confidence 6789999999999999742 8999964332111100 113444432 34799999999999
Q ss_pred eeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 81 GKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 81 G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
|.|+|.+.+..+. ....+.|.|...+.....+.. ...++..+.. +....+.+|++++|.|.+.
T Consensus 89 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~ 152 (247)
T 1svz_A 89 GIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSG---------------GGGSEVQLQQ-SGPELKKPGETVKISCKAT 152 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC------------------------------CCEEEE-CCCEEECTTCCEEEEEEEE
T ss_pred EEEEEEEccCCccEECCCEEEEEECCccccccccc---------------cccCceEEeC-CCceeecCCCcEEEEEEEc
Confidence 9999999887543 222345666543210000000 0000111111 1223588999999999998
Q ss_pred CCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 160 GNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 160 ~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
+.+ .+.+.|++++ ..+ .. .....|.|.+++.+|+|.|.|.+.|.
T Consensus 153 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 153 NYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 874 5699999963 111 00 01247999999999999999999985
No 215
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=126.90 Aligned_cols=116 Identities=19% Similarity=0.322 Sum_probs=93.5
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCC--------CCCCeEEeccCCCCCCeEEEEEEEcCCC--CceEEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD--------HNEPVFRIDSVRKEDKGMYQCVIRNEQE--SAQASGELK 214 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~~--~~~~~~~l~ 214 (267)
.+.+|++++|.|.+.+ +.+.+.|+|++..+.. .....|.|.+++.+|+|.|+|.+.|..+ .....+.+.
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~ 93 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELV 93 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEE
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEE
Confidence 7888999999999988 6789999999987752 3457899999999999999999999876 234456666
Q ss_pred EecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 215 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 215 v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
|.....+|.+...+.. .+.+|+.++|.|.+.+ +++.+.|+|+|..+.
T Consensus 94 V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 140 (196)
T 3p2t_A 94 MTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHP 140 (196)
T ss_dssp EECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCG
T ss_pred ecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCccc
Confidence 6654456777766554 6789999999999987 456899999997653
No 216
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.79 E-value=1.8e-18 Score=134.85 Aligned_cols=127 Identities=24% Similarity=0.356 Sum_probs=102.4
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.|.|..+
T Consensus 7 ~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 86 (305)
T 2nzi_A 7 FKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGG 86 (305)
T ss_dssp EEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTE
T ss_pred eeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCC
Confidence 3344556689999999999999999999999999998875431 13799999999999999999999988
Q ss_pred CceEEEEEEEecccCCCee-----ecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 206 SAQASGELKLGGRFDPPVI-----KESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 206 ~~~~~~~l~v~~~~~~p~~-----~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
.......|.|.. +|.+ ...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+.
T Consensus 87 ~~~~~~~l~V~~---~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~ 149 (305)
T 2nzi_A 87 SVSGTASLEVEV---PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG 149 (305)
T ss_dssp EEEEEEEEEECE---EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSS
T ss_pred CccceEEEEEec---CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCC
Confidence 777777777753 3332 223345678899999999999999999999999998876543
No 217
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.79 E-value=1.8e-18 Score=125.62 Aligned_cols=118 Identities=25% Similarity=0.490 Sum_probs=97.0
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
...+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.+..+.......+.+
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 92 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 92 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEE
Confidence 457888999999999999998999999999887643 3467999999999999999999998877666666766
Q ss_pred ecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEEC--CEEcCC
Q psy3045 216 GGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD--GKKLVN 264 (267)
Q Consensus 216 ~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~l~~ 264 (267)
. .+|.+.... ...+.+|+.+.|.|.+.|.|.+.+.|+++ |..+..
T Consensus 93 ~---~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 93 F---VQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp E---EEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECT
T ss_pred E---ccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeec
Confidence 5 355554433 34677899999999999999999999998 665543
No 218
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.79 E-value=7.1e-19 Score=137.95 Aligned_cols=157 Identities=15% Similarity=0.229 Sum_probs=102.2
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceE--EEEeeEEEEeecccCCCeeEEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRV--KQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
+|.|...+ .. .+.+|++++|.|.+.+ +.|++++....... ..... ......|.|.+++.+|+|.|+|.
T Consensus 119 ~p~~~~~~--~~-~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~---~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 192 (316)
T 3vh8_G 119 KPSLLAHP--GP-LVKSGERVILQCWSDIMFEHFFLHKEGISKDPSR---LVGQIHDGVSKANFSIGPMMLALAGTYRCY 192 (316)
T ss_dssp CCEEEEES--CS-EEETTCCEEEEEEESSCCSEEEEEETTCCSCCEE---EECEEETTEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCeEEecC--CC-ccCCCCeEEEEEcCCCCCcEEEEEECCCccccce---eeeeecCCCceEEEEECCCChhhCceEEEE
Confidence 45666544 23 3889999999999976 89999643221110 00111 12456899999999999999999
Q ss_pred EEcCCCcc-----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC
Q psy3045 87 VNNSVGGE-----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN 161 (267)
Q Consensus 87 ~~~~~~~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 161 (267)
+.|..+.. +..+.|.|..... .+... ..+. ..+.+|+.++|.|.+. .
T Consensus 193 a~n~~g~~~~s~~s~~~~l~V~~~~~---~p~i~-----------------------~~~~-~~v~~G~~v~L~C~~~-~ 244 (316)
T 3vh8_G 193 GSVTHTPYQLSAPSDPLDIVVTGPYE---KPSLS-----------------------AQPG-PKVQAGESVTLSCSSR-S 244 (316)
T ss_dssp EECTTCTTBCCCCCCCEEEEEECSSC---CCEEE-----------------------EESC-SCCCTTSCCEEEEEES-S
T ss_pred EecCCCCccccCCCCCEEEEecCCCC---CCeEE-----------------------eCCC-CeecCCCcEEEEEECC-C
Confidence 99987641 4455666654211 11111 0011 1467899999999997 4
Q ss_pred CCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 162 PVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 162 p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
+.+.+.|+++|..+... ....|.|.+++ |+|.|+|.+.|..+
T Consensus 245 ~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~ 296 (316)
T 3vh8_G 245 SYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHS 296 (316)
T ss_dssp CCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTB
T ss_pred CCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCC
Confidence 67899999999876521 12578898888 99999999999654
No 219
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.78 E-value=7.4e-18 Score=128.75 Aligned_cols=178 Identities=19% Similarity=0.267 Sum_probs=109.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEec---------c--eeeeecccCcceeccc--------cCCceEEEE----eeE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQ---------E--NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGT 69 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~---------~--~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~ 69 (267)
.+.+...| ..+.+.+|++|+|.|.+. . +.|+++..+....... ....|+... ..+
T Consensus 5 ~~~v~q~p--~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (264)
T 2gjj_A 5 DIVLTQTP--SSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFT 82 (264)
T ss_dssp CCCEEEEC--SEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred ccceEecC--CeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEE
Confidence 45666655 688999999999999964 2 8899964332111100 123454432 358
Q ss_pred EEEeecccCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeec-CCCcccccCCceEEEe
Q psy3045 70 LIIKEAKVEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEI-SPPLAAGVEPTVQTID 147 (267)
Q Consensus 70 l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~~ 147 (267)
|.|.+++.+|+|.|+|.+.+..+. ....+.|.|...+......... ... ... .+...+.. +....+.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~-~~~~~v~ 151 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSG-------GGG---SGGGGSEVQLQQ-SGPEVVK 151 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-----------------------------CCEEEE-CCCEEEC
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCccccccccc-------ccc---cccccCcEEEeC-CCCEEEc
Confidence 999999999999999999886542 1233466776542100000000 000 000 00011111 1223688
Q ss_pred cCCCEEEEeEeCCCCC--ceEEEEECC--ccCC------------------C----------CCCCeEEeccCCCCCCeE
Q psy3045 148 FGRPAQFTCKYEGNPV--KTISWMKDG--KPVP------------------D----------HNEPVFRIDSVRKEDKGM 195 (267)
Q Consensus 148 ~g~~v~l~C~~~~~p~--~~~~W~~~~--~~~~------------------~----------~~~~~l~i~~~~~~d~g~ 195 (267)
+|++++|.|.+.+.+. +.+.|+++. ..+. . .....|.|.+++.+|+|.
T Consensus 152 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 231 (264)
T 2gjj_A 152 TGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSAD 231 (264)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEE
Confidence 9999999999988763 799999963 2110 0 113479999999999999
Q ss_pred EEEEEEcC
Q psy3045 196 YQCVIRNE 203 (267)
Q Consensus 196 y~C~~~~~ 203 (267)
|.|.+.|.
T Consensus 232 Y~C~a~n~ 239 (264)
T 2gjj_A 232 YYCVRSGN 239 (264)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 99999985
No 220
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.78 E-value=2.2e-18 Score=129.20 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=103.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
..+.+.+|++++|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 4578999999999999863 99999643321110 01124555542 34899999999
Q ss_pred CCCeeEEEEEEcCCC--c----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC-C
Q psy3045 78 EDSGKYLCVVNNSVG--G----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG-R 150 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~--~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g-~ 150 (267)
+|+|.|+|.+.+..+ . ....+.|.|...+. ..|.... ..+. ..+..| +
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~--~~P~v~~----------------------~~p~-~~~~~g~~ 142 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSA--SAPTLFP----------------------LVSC-ENSPSDTS 142 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCC--BCCEEEE----------------------EECC-------CC
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCC--CCCceEE----------------------eccc-cccCCCCC
Confidence 999999999984221 1 11234666654210 1111110 0001 133468 8
Q ss_pred CEEEEeEeCCC-CCc-eEEEEE-CCccCCC---------CC----CCeEEeccCCC--CCCeEEEEEEEcCCCCceEEEE
Q psy3045 151 PAQFTCKYEGN-PVK-TISWMK-DGKPVPD---------HN----EPVFRIDSVRK--EDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 151 ~v~l~C~~~~~-p~~-~~~W~~-~~~~~~~---------~~----~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
.++|.|.+.+. |.+ .+.|++ +|..+.. .. .+.|.|..... +|.|.|+|.|.|..+.......
T Consensus 143 ~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~ 222 (232)
T 1dn0_B 143 SVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVP 222 (232)
T ss_dssp SEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEE
T ss_pred cEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEe
Confidence 99999999876 765 999999 8877542 11 13567777776 7899999999999876554444
Q ss_pred EE
Q psy3045 213 LK 214 (267)
Q Consensus 213 l~ 214 (267)
+.
T Consensus 223 i~ 224 (232)
T 1dn0_B 223 LP 224 (232)
T ss_dssp CC
T ss_pred cC
Confidence 33
No 221
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.78 E-value=1.7e-17 Score=120.79 Aligned_cols=161 Identities=15% Similarity=0.147 Sum_probs=108.1
Q ss_pred ccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 16 FSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 16 ~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
|...+....+.+.+|++++|.|.+.. +.|++.+.. + ...........|.|.+++.+|+|.|.|.+.+
T Consensus 8 ~~V~pp~~~v~v~~G~sv~L~C~a~~p~P~~~i~W~~~~~~------l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 80 (210)
T 1gsm_A 8 LQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTS------L-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSC 80 (210)
T ss_dssp EEEESCCSEEEEETTCCEEEEEEECCSSTTCEEEEESSTTT------T-CCEEEESSEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEeCCCCceEEeCCCCEEEEEECCCCCCCcceEEeecccc------c-CcEEecCCccEEEECccCcccCceEEEEEEe
Confidence 43344324579999999999999922 899984211 1 1111223456899999999999999999999
Q ss_pred CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC----c
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV----K 164 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~----~ 164 (267)
..+.....+.|.|..+|..... . +. .+..|+.+ |.|.+.+. |. +
T Consensus 81 ~~~~~~~~~~ltV~~~P~~~~i------~----------------------~~--~~~~g~~~-l~C~a~g~~P~~~~~l 129 (210)
T 1gsm_A 81 GGRTFQHTVQLLVYAFPNQLTV------S----------------------PA--ALVPGDPE-VACTAHKVTPVDPNAL 129 (210)
T ss_dssp TTEEEEEEEEEEEEBCCSEEEE------E----------------------SS--SBCTTCCE-EEEEEEEEBCCCTTTE
T ss_pred CCCceEEEEEEEEEecCCCcEE------c----------------------cc--eEEeCCce-EEEEeCCCCCCCCCCc
Confidence 8877778888998876532110 0 00 34467888 99999875 63 4
Q ss_pred eEEEEECCccCCCCC-----------------C------CeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEE
Q psy3045 165 TISWMKDGKPVPDHN-----------------E------PVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 165 ~~~W~~~~~~~~~~~-----------------~------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
++.|++|+.++.... . +++.+.....++.+.|+|.|.+..-.........
T Consensus 130 ti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~~~~~~ 202 (210)
T 1gsm_A 130 SFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQA 202 (210)
T ss_dssp EEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCccccccc
Confidence 899999998874321 0 1122224455566899999999875555444333
No 222
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.78 E-value=2.9e-18 Score=132.14 Aligned_cols=166 Identities=19% Similarity=0.275 Sum_probs=102.7
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLR 87 (280)
T ss_dssp CCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 6789999999999999864 89998533221111 11122344432 1479999999
Q ss_pred cCCCeeEEEEEEcCC--------C-ccEEEEEEEEEe-ccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEE
Q psy3045 77 VEDSGKYLCVVNNSV--------G-GESVETVLTVTA-PLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTI 146 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~--------~-~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 146 (267)
.+|+|.|+|.+.+.. . .......|.|.. ......... ....++..+...+. ..+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~---------------~~~~~~~~v~~~p~-~~v 151 (280)
T 3fku_X 88 SEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGS---------------GGGGIQPGLTQPPS-VSK 151 (280)
T ss_dssp STTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC-----------------------------CCCSBBCCSE-EEE
T ss_pred hhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCC---------------CceEeeeEEEeCCc-EEE
Confidence 999999999998861 1 112233455543 100000000 00011222223333 688
Q ss_pred ecCCCEEEEeEeCC-CC-CceEEEEECC--ccCC---------------------CCCCCeEEeccCCCCCCeEEEEEEE
Q psy3045 147 DFGRPAQFTCKYEG-NP-VKTISWMKDG--KPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 147 ~~g~~v~l~C~~~~-~p-~~~~~W~~~~--~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
.+|++++|.|.+.+ .+ .+.+.|++.. ..+. ......|.|.+++.+|+|.|.|.+.
T Consensus 152 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 231 (280)
T 3fku_X 152 GLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTW 231 (280)
T ss_dssp CTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEE
T ss_pred ecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEe
Confidence 99999999999987 43 4789999832 2211 0012359999999999999999998
Q ss_pred cCC
Q psy3045 202 NEQ 204 (267)
Q Consensus 202 ~~~ 204 (267)
+..
T Consensus 232 ~~~ 234 (280)
T 3fku_X 232 DSS 234 (280)
T ss_dssp ETT
T ss_pred cCC
Confidence 865
No 223
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=2.4e-18 Score=129.80 Aligned_cols=177 Identities=16% Similarity=0.265 Sum_probs=110.0
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCcceeccc------------c-CCceEEEE------e
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAV------------P-LNDRVKQV------S 67 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~------------~-~~~~~~~~------~ 67 (267)
+.+...+ ..+.+.+|++++|.|.+.+ +.|++...+....... . ...|+... +
T Consensus 2 ~~v~q~p--~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 79 (242)
T 1hxm_B 2 GHLEQPQ--ISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETST 79 (242)
T ss_dssp CEEECCC--SEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTE
T ss_pred CccCcCC--ceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcE
Confidence 3444545 6889999999999999865 9999964332111000 0 34555542 4
Q ss_pred eEEEEeecccCCCeeEEEEEEcCCC-c------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccC
Q psy3045 68 GTLIIKEAKVEDSGKYLCVVNNSVG-G------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVE 140 (267)
Q Consensus 68 ~~l~i~~~~~~d~G~Y~C~~~~~~~-~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 140 (267)
.+|.|.+++.+|+|.|+|.+.+... . ....+.|.|...+..... +|......
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~---------------------~p~~~v~~ 138 (242)
T 1hxm_B 80 STLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADV---------------------SPKPTIFL 138 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCC---------------------SCBCCCCC
T ss_pred EEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCc---------------------CCCceEEC
Confidence 5899999999999999999987531 1 112346666542110000 00000001
Q ss_pred CceEEEecCCCEEEEeEeCCC-CC-ceEEEEECCc-cCCCC--------CC-----CeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN-PV-KTISWMKDGK-PVPDH--------NE-----PVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~-~~~~~--------~~-----~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
+....+..|+.+.|.|.+.+. |. +.+.|++++. .+... +. +.|.|..... + |.|+|.|.|..
T Consensus 139 p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~ 216 (242)
T 1hxm_B 139 PSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHEN 216 (242)
T ss_dssp CCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETT
T ss_pred CChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCC
Confidence 111134569999999999886 54 7999999987 55321 11 3567765554 4 99999999998
Q ss_pred CCceEEEEEEE
Q psy3045 205 ESAQASGELKL 215 (267)
Q Consensus 205 ~~~~~~~~l~v 215 (267)
+.......+.+
T Consensus 217 ~~~~~~~~~~~ 227 (242)
T 1hxm_B 217 NKNGVDQEIIF 227 (242)
T ss_dssp SGGGSCEEEEE
T ss_pred CCCCceeEeec
Confidence 76655444443
No 224
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.78 E-value=2.2e-18 Score=138.89 Aligned_cols=121 Identities=21% Similarity=0.335 Sum_probs=102.3
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEEC--CccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKD--GKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+... ....|.|.++..+|+|.|+|.|.|..|
T Consensus 8 ~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 87 (389)
T 2jll_A 8 KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIG 87 (389)
T ss_dssp CCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred CceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCC
Confidence 344777899999999999999999999999 7665431 235799999999999999999999998
Q ss_pred CceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 206 SAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 206 ~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|+.+..+
T Consensus 88 ~~~~~~~l~V~---~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~ 144 (389)
T 2jll_A 88 GHQKSMYLDIE---YAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAK 144 (389)
T ss_dssp EEEEEEEEEEE---EEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCT
T ss_pred CcceEEEEEEE---eCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcc
Confidence 88778888776 5677766665557889999999999999999999999999998754
No 225
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.78 E-value=2.1e-18 Score=127.27 Aligned_cols=123 Identities=21% Similarity=0.391 Sum_probs=95.0
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCC------------CC-----CCCeEEeccCCCCCCeEEEEEEE
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP------------DH-----NEPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~------------~~-----~~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .. ....|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~ 85 (212)
T 1f97_A 6 TAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVS 85 (212)
T ss_dssp CSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEE
T ss_pred ecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEE
Confidence 34555688999999999999988999999999886621 01 23779999999999999999999
Q ss_pred cCCCC--ceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEE-eecCCCCcEEEEECCE-EcCC
Q psy3045 202 NEQES--AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCI-ASGNPTPEISWYLDGK-KLVN 264 (267)
Q Consensus 202 ~~~~~--~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~i~W~~~~~-~l~~ 264 (267)
+..+. ....+.+.|. .+|.+...+....+.+|+.+.|.|. +.+.|.|.+.|+++|. .+..
T Consensus 86 ~~~g~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~ 149 (212)
T 1f97_A 86 EEGGQNYGEVSIHLTVL---VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTA 149 (212)
T ss_dssp ETTSSSEEEEEEEEEEE---BCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-
T ss_pred ccCCCcccEEEEEEEEE---cCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccc
Confidence 98763 3445555555 3444333333457889999999999 7899999999999999 7754
No 226
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.78 E-value=3.3e-18 Score=123.56 Aligned_cols=115 Identities=17% Similarity=0.282 Sum_probs=92.4
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCC--ceEEEEEEEecccCCC
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQES--AQASGELKLGGRFDPP 222 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~v~~~~~~p 222 (267)
.+.+|+++.|.|.+.+ +.+.+.|+|++.. .......|.|.+++.+|+|.|+|.+.|..+. ....+.+.+.....+|
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p 95 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKP 95 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTC-CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCC
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCcc-ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCC
Confidence 6889999999999887 7789999999876 3345688999999999999999999997643 2334566665544567
Q ss_pred eeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 223 VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
.+...+ ...+.+|+.+.|.|.+.+.| +.+.|+|+|..+.
T Consensus 96 ~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~ 134 (184)
T 2gi7_A 96 SLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAP 134 (184)
T ss_dssp EEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTT
T ss_pred EEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCc
Confidence 777665 34678999999999987654 6999999998765
No 227
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.78 E-value=5.5e-18 Score=126.04 Aligned_cols=158 Identities=18% Similarity=0.298 Sum_probs=104.4
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec---------------cccCCceEEEE------eeEEEEee
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV---------------AVPLNDRVKQV------SGTLIIKE 74 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~---------------~~~~~~~~~~~------~~~l~i~~ 74 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... ..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 4678999999999999874 99998643322111 11123455432 23699999
Q ss_pred cccCCCeeEEEEEEcCCC--ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE
Q psy3045 75 AKVEDSGKYLCVVNNSVG--GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA 152 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v 152 (267)
++.+|+|.|+|.+.+... .....+.|.|..... ..+.... ..+.. . ..|+.+
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~--~~p~v~~----------------------~~~~~-~-~~g~~v 141 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASP--TSPKVFP----------------------LSLCS-T-QPDGNV 141 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCC--BCCEEEE----------------------EECCS-C-CCTTEE
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCC--CCCeEEE----------------------ecCcc-c-ccCCCE
Confidence 999999999999988641 223334566652111 1111110 00111 1 568999
Q ss_pred EEEeEeCC-CCC--ceEEEEECCccCC----------CCCC----CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 153 QFTCKYEG-NPV--KTISWMKDGKPVP----------DHNE----PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 153 ~l~C~~~~-~p~--~~~~W~~~~~~~~----------~~~~----~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
+|.|.+.+ .|. +.+.|++++..+. .+.. +.|.|.....+|.|.|+|.|.|..+.
T Consensus 142 ~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 142 VIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp EEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred EEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 99999988 565 4999999998762 1111 34888888888999999999998754
No 228
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.78 E-value=2.6e-18 Score=125.63 Aligned_cols=116 Identities=20% Similarity=0.316 Sum_probs=89.4
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCC--------CCCCCeEEeccCCCCCCeEEEEEEEcCC-C--CceEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQ-E--SAQASGEL 213 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~--------~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~--~~~~~~~l 213 (267)
.+.+|++++|.|.+.+.|. .+.|+|++..+. ......|.|.++..+|+|.|+|.+.|.. + .......+
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l 93 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLEL 93 (198)
T ss_dssp EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEE
T ss_pred cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEE
Confidence 7889999999999988775 799999998763 1246889999999999999999999976 4 33445666
Q ss_pred EEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 214 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 214 ~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
.|.....+|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|+|+|..+.
T Consensus 94 ~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~ 141 (198)
T 1ugn_A 94 VVTGAYIKPTLSAQPS-PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEH 141 (198)
T ss_dssp EEECSSCCCEEEEESC-SEEETTCCEEEEEECSSC-CSEEEEEEC-----
T ss_pred EEcccccCCccccCCc-cccCCCCcEEEEEecCCC-CcEEEEEECCCccC
Confidence 6665334566665443 578899999999999988 78999999998763
No 229
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.78 E-value=7.7e-18 Score=130.51 Aligned_cols=168 Identities=17% Similarity=0.235 Sum_probs=104.5
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++++|.|.+.+ +.|++...+..... ......|+... ..+|.|.+++
T Consensus 30 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 30 GPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred CcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 5789999999999999864 99999643221110 01122344322 3589999999
Q ss_pred cCCCeeEEEEEEcCC-CccE----EEEEEEEEecc-ccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCC
Q psy3045 77 VEDSGKYLCVVNNSV-GGES----VETVLTVTAPL-AAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGR 150 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~-~~~~----~~~~l~V~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~ 150 (267)
.+|+|.|+|.+.+.. +... ..+.|.|.... ......... ....+..+...+....+.+|+
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~--------------~~~~~~~v~~~p~~~~v~~G~ 175 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSG--------------GGGSDLVMSQSPSSLAVSAGE 175 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEECCCEEEEECC------------------------------CCCEECSCSEEEEETTS
T ss_pred HHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCC--------------CCCccceEEcCCCEEEEcCCC
Confidence 999999999999864 2111 12345554310 000000000 000111122234455788999
Q ss_pred CEEEEeEeCCCCCc------eEEEEECC--ccCC-------------C--------CCCCeEEeccCCCCCCeEEEEEEE
Q psy3045 151 PAQFTCKYEGNPVK------TISWMKDG--KPVP-------------D--------HNEPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 151 ~v~l~C~~~~~p~~------~~~W~~~~--~~~~-------------~--------~~~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
+++|.|.+.+.+.+ .+.|+|++ ..+. . .....|.|.++..+|+|.|.|.+.
T Consensus 176 ~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 255 (291)
T 2gki_A 176 KVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQS 255 (291)
T ss_dssp CEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred cEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEc
Confidence 99999999988765 89999963 2211 0 112479999999999999999999
Q ss_pred cCC
Q psy3045 202 NEQ 204 (267)
Q Consensus 202 ~~~ 204 (267)
+..
T Consensus 256 ~~~ 258 (291)
T 2gki_A 256 YYH 258 (291)
T ss_dssp ETT
T ss_pred cCC
Confidence 843
No 230
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.78 E-value=3.1e-18 Score=127.02 Aligned_cols=117 Identities=21% Similarity=0.285 Sum_probs=91.4
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCC--------CCCCC--eEEeccCCCCCCeEEEEEEEcCCCCce--EEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP--------DHNEP--VFRIDSVRKEDKGMYQCVIRNEQESAQ--ASGE 212 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~--------~~~~~--~l~i~~~~~~d~g~y~C~~~~~~~~~~--~~~~ 212 (267)
.+.+|++++|.|.+.+ +.+.+.|+|+|..+. ..... .|.|.+++.+|+|.|+|.+.|..+... ..+.
T Consensus 19 ~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~ 97 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLE 97 (218)
T ss_dssp EEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEE
T ss_pred ccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEE
Confidence 6889999999999876 678999999987653 12345 899999999999999999999765333 2455
Q ss_pred EEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 213 LKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 213 l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
+.|.....+|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+|+|..+.
T Consensus 98 l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~ 147 (218)
T 1uct_A 98 LVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSL 147 (218)
T ss_dssp EEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSC
T ss_pred EEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccc
Confidence 6665444567776655 3478899999999977778888999999998764
No 231
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.78 E-value=7e-19 Score=131.28 Aligned_cols=158 Identities=21% Similarity=0.292 Sum_probs=103.9
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
....+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4678999999999999863 99999643321110 01123455443 3589999999
Q ss_pred cCCCeeEEEEEEcCCC-----c---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 77 VEDSGKYLCVVNNSVG-----G---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~-----~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+|+|.|+|.+.+..+ . ....+.|.|...+. ..|.... ..+.. .+..
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~--~~P~v~~----------------------~~~~~-~~~~ 142 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST--KGPSVFP----------------------LAPSS-KSTS 142 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC--BCCEEEE----------------------ECCCT-TCCC
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCC--cCCeEEE----------------------ecccc-cccC
Confidence 9999999999998754 1 11234666654210 1111110 00100 2456
Q ss_pred CCCEEEEeEeCCC-CCc-eEEEEECCccCCC--------CC-----CCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 149 GRPAQFTCKYEGN-PVK-TISWMKDGKPVPD--------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 149 g~~v~l~C~~~~~-p~~-~~~W~~~~~~~~~--------~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
|+.+.|.|.+.+. |.+ .+.|++++..+.. .+ .+.|.|.....+| |.|+|.|.|....
T Consensus 143 g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 143 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp CCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred CCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 9999999999886 665 9999999876321 11 1247888888778 9999999997644
No 232
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.78 E-value=6e-18 Score=126.52 Aligned_cols=126 Identities=18% Similarity=0.392 Sum_probs=101.3
Q ss_pred CceEEEecCCCEEEEeEeCCCCC-ceEEEEECCccCC-----------------------------CCCCCeEEeccCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPV-KTISWMKDGKPVP-----------------------------DHNEPVFRIDSVRK 190 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~-~~~~W~~~~~~~~-----------------------------~~~~~~l~i~~~~~ 190 (267)
+....+.+|+.+.|.|.+.+.+. +.+.|++++.... ......|.|.+++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~ 86 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQV 86 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCG
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCc
Confidence 45568899999999999998884 8999998655421 12234599999999
Q ss_pred CCCeEEEEEEEcCC-CCceEEEEEEEecccCCCeeecCCceeEEecCCcE-EEEEEe-ecCCCCcEEEEECCEEcCCCC
Q psy3045 191 EDKGMYQCVIRNEQ-ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNY-YFKCIA-SGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 191 ~d~g~y~C~~~~~~-~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+|+|.|+|.+.+.. +.......+.|......|.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|+++|..+....
T Consensus 87 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 87 GDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred ccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 99999999999986 66666777887754455777776666667789988 999999 899999999999999987553
No 233
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.77 E-value=8.5e-18 Score=129.51 Aligned_cols=172 Identities=23% Similarity=0.338 Sum_probs=109.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCccee-------------ccccCCceEEEE-----eeE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRK-------------VAVPLNDRVKQV-----SGT 69 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~-------------~~~~~~~~~~~~-----~~~ 69 (267)
.+.+...+ ..+.+.+|++++|.|.+.+ +.|+++..+.... .......|+... +.+
T Consensus 24 ~~~v~~~p--~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (279)
T 2wbj_D 24 GAVVSQHP--SWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLST 101 (279)
T ss_dssp CCCEEEEC--SEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEE
T ss_pred cceEEeCC--CeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEE
Confidence 45666655 6899999999999999976 9999964322111 000123455443 348
Q ss_pred EEEeecccCCCeeEEEEEEcCCC----c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCce
Q psy3045 70 LIIKEAKVEDSGKYLCVVNNSVG----G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTV 143 (267)
Q Consensus 70 l~i~~~~~~d~G~Y~C~~~~~~~----~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 143 (267)
|.|.+++.+|+|.|+|.+.+..+ . ....+.|.|.........|.... ..+..
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~----------------------~~~~~ 159 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAV----------------------FEPSE 159 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEE----------------------EECCH
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEE----------------------ECCCc
Confidence 99999999999999999998432 1 12234566654321111221110 00111
Q ss_pred EEEecCCCEEEEeEeCCC-CC-ceEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEE
Q psy3045 144 QTIDFGRPAQFTCKYEGN-PV-KTISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVI 200 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~ 200 (267)
..+..|+.+.|.|.+.+. |. +.+.|++++..+... .. +.|.|.....+| .|.|+|.|
T Consensus 160 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v 239 (279)
T 2wbj_D 160 AEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQV 239 (279)
T ss_dssp HHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEE
T ss_pred ccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEE
Confidence 123468999999999986 43 699999999876431 11 236676666654 67899999
Q ss_pred EcCCCCce
Q psy3045 201 RNEQESAQ 208 (267)
Q Consensus 201 ~~~~~~~~ 208 (267)
.|......
T Consensus 240 ~n~~~~~~ 247 (279)
T 2wbj_D 240 QFYGLSEN 247 (279)
T ss_dssp EECCBCTT
T ss_pred EeCCCCCC
Confidence 99765443
No 234
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.77 E-value=1.2e-18 Score=130.37 Aligned_cols=161 Identities=17% Similarity=0.227 Sum_probs=103.1
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeec
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEA 75 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~ 75 (267)
..+.+.+|++++|.|.+.+ +.|++...+..... ......|+... +.+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4678999999999999863 89998643321110 01123455542 368999999
Q ss_pred ccCCCeeEEEEEEcCCC------c---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEE
Q psy3045 76 KVEDSGKYLCVVNNSVG------G---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTI 146 (267)
Q Consensus 76 ~~~d~G~Y~C~~~~~~~------~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 146 (267)
+.+|+|.|+|.+.+..+ . ....+.|.|.... ...|... .. +....+
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~----------------------~~-~~~~~~ 142 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK--TTAPSVY----------------------PL-APVCGD 142 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC--CBCCEEE----------------------EE-CC----
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC--CCCCEEE----------------------Ee-cccccc
Confidence 99999999999988654 1 0122455555311 0111111 00 111135
Q ss_pred ecCCCEEEEeEeCCC-CCc-eEEEEECCccCCC---------C---CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 147 DFGRPAQFTCKYEGN-PVK-TISWMKDGKPVPD---------H---NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 147 ~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~~~~---------~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
..|+.+.|.|.+.+. |.+ .+.|++++..+.. + ..+.|.|.....++ |.|+|.|.|..+....
T Consensus 143 ~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 143 TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp -CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 679999999999886 766 9999998876421 0 12347787777756 9999999998766543
No 235
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.77 E-value=2.5e-18 Score=127.47 Aligned_cols=126 Identities=28% Similarity=0.514 Sum_probs=98.9
Q ss_pred ccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeE----EeccCCCCCCeEEEEEEEc
Q psy3045 136 AAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVF----RIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 136 ~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l----~i~~~~~~d~g~y~C~~~~ 202 (267)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+ .|.++..+|+|.|+|.+.|
T Consensus 11 ~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n 90 (217)
T 2vr9_A 11 RIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKN 90 (217)
T ss_dssp EEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEE
T ss_pred EEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEec
Confidence 33344556688999999999999998989999999998875431 1222 5778899999999999999
Q ss_pred CCCCce-EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEECCEEcC
Q psy3045 203 EQESAQ-ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 203 ~~~~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~l~ 263 (267)
..+... ....+.+.. .+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.
T Consensus 91 ~~g~~~~~~~~l~v~~--~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 91 RVGQAVSRHASLQIAV--LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp TTEEEECCCEEEEECE--ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred CCCccccccceEEEEE--eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 876542 244555543 45666666677788999999999999 899999999999999887
No 236
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.77 E-value=5.2e-18 Score=124.55 Aligned_cols=116 Identities=13% Similarity=0.242 Sum_probs=91.4
Q ss_pred CceEEEecCCCEEEEeEeCCCCCce-EEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEeccc
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKT-ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 219 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~ 219 (267)
+....+.+|+.+.|.|.+.+.|.+. +.|++++..+... ...|.|.+++.+|+|.|+|.+.|... .....+.|.
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~~--s~~~~l~V~--- 87 (204)
T 3sgj_C 14 PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-ASSYFIDAATVDDSGEYRCQTQLSTL--SDPVQLEVH--- 87 (204)
T ss_dssp SCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-SSEEEESSCCGGGCEEEEEEETTSBC--CCCEEEEEE---
T ss_pred CCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-ccEEEEecccccCCEEEEEEeCCCcc--cccEEEEEe---
Confidence 3435788999999999999987664 9999999987644 48999999999999999999987533 334555554
Q ss_pred CCCeeecCCceeEEecCCcEEEEEEeecC-CCCcEEEEECCEEcC
Q psy3045 220 DPPVIKESFSDETLNPGPNYYFKCIASGN-PTPEISWYLDGKKLV 263 (267)
Q Consensus 220 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~l~ 263 (267)
.+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|+++|..+.
T Consensus 88 ~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 88 IGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131 (204)
T ss_dssp CSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred cCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee
Confidence 3455444443 578899999999999765 557999999998764
No 237
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.77 E-value=5e-19 Score=140.10 Aligned_cols=163 Identities=19% Similarity=0.310 Sum_probs=114.8
Q ss_pred eeEEecCCCeEEEEEE-----ecc-----eeeeecccCcceeccccCCceEEEE--eeEEEEeecccCCCeeEEEEEEcC
Q psy3045 23 IRFKKPGGESFALLCE-----AQE-----NMWFKFIEGSSRKVAVPLNDRVKQV--SGTLIIKEAKVEDSGKYLCVVNNS 90 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~-----~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~ 90 (267)
....+.+|+++.|.|. +.+ +.|++++.... ....++... .+.|.|.+++..|+|.|+|.+.|.
T Consensus 128 ~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 202 (339)
T 3o4o_C 128 YPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLD-----KDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFA 202 (339)
T ss_dssp EEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCC-----TTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECC
T ss_pred cceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCC-----CCCceeEEcCCcceEEEcccCHhhCeEEEEEEEEC
Confidence 3457899999999999 554 99999633211 111233322 247999999999999999999998
Q ss_pred CCc----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe---CCCC-
Q psy3045 91 VGG----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY---EGNP- 162 (267)
Q Consensus 91 ~~~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~---~~~p- 162 (267)
.+. ....+.|.|...+... .+ .+...+....+..|+.+.|.|.+ .+.|
T Consensus 203 ~g~~~~~~~~~~~l~V~~~~~~~-~P-----------------------~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~ 258 (339)
T 3o4o_C 203 HEGQQYNITRSIELRIKKKKEET-IP-----------------------VIISPLKTISASLGSRLTIPCKVFLGTGTPL 258 (339)
T ss_dssp BTTBCCEEEEEEEEEEECCCCCC-CC-----------------------EECCCSCCCCCCCCSCCCCCCCEEESSSCCS
T ss_pred CCCeEEEEEEEEEEEEEcCCCCC-CC-----------------------EEecCCceeEeccCCCEEEEEEEECCCCCCC
Confidence 774 3556666666432100 00 01111233367789999999999 8888
Q ss_pred CceEEEEECCccCCCC---------------CCC------eEEeccCCCCCC-eEEEEEEEcCCCCceEEEEEE
Q psy3045 163 VKTISWMKDGKPVPDH---------------NEP------VFRIDSVRKEDK-GMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 163 ~~~~~W~~~~~~~~~~---------------~~~------~l~i~~~~~~d~-g~y~C~~~~~~~~~~~~~~l~ 214 (267)
.+.+.|++++..+... ... .|.|.++..+|. |.|+|.|.|..|.....+.+.
T Consensus 259 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~ 332 (339)
T 3o4o_C 259 TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332 (339)
T ss_dssp SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCC
T ss_pred CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhh
Confidence 8899999999876421 112 799999999997 999999999998776655443
No 238
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.77 E-value=1.5e-18 Score=127.98 Aligned_cols=124 Identities=30% Similarity=0.520 Sum_probs=96.0
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCe-----EEeccCCCCCCeEEEEEEEcC
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPV-----FRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~-----l~i~~~~~~d~g~y~C~~~~~ 203 (267)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ... +.+.++..+|+|.|+|.+.+.
T Consensus 15 ~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~ 94 (212)
T 2v9r_A 15 HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNY 94 (212)
T ss_dssp CCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEET
T ss_pred CCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECC
Confidence 3445588899999999999988888999999998765321 122 334456899999999999998
Q ss_pred CCCc-eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEECCEEcCCC
Q psy3045 204 QESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 204 ~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~l~~~ 265 (267)
.+.. .....+.+.. .++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|+.+..+
T Consensus 95 ~g~~~~~~~~l~V~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~ 156 (212)
T 2v9r_A 95 LGEAVSHDASLEVAI--LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK 156 (212)
T ss_dssp TEEEECCCEEEEECE--ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT
T ss_pred CCceeecceEEEEEe--ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC
Confidence 7654 2345555543 45556666667789999999999999 89999999999999998754
No 239
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.77 E-value=9.6e-19 Score=132.87 Aligned_cols=167 Identities=16% Similarity=0.195 Sum_probs=104.6
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+|+|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 4678999999999999854 999986433221111 1123444432 2469999999
Q ss_pred cCCCeeEEEEEEcCC----CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCE
Q psy3045 77 VEDSGKYLCVVNNSV----GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPA 152 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~----~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v 152 (267)
.+|+|.|+|.+.+.. ......+.|.|.... ...+.... ......+..|+.+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~-----------------------~~~~~~~~~g~~v 142 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK--TTPPSVYP-----------------------LAPGSAAQTNSMV 142 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC--CBCCEEEE-----------------------ECC------CCEE
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccC--CCCCeEEE-----------------------ecCCcccCCCCcE
Confidence 999999999998752 112233456664211 11111110 0111145569999
Q ss_pred EEEeEeCC-CCCc-eEEEEECCccCC--------CCC----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 153 QFTCKYEG-NPVK-TISWMKDGKPVP--------DHN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 153 ~l~C~~~~-~p~~-~~~W~~~~~~~~--------~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
.|.|.+.+ .|.+ .+.|++++..+. ... .+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 143 ~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 143 TLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp EEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 99999988 5655 899999887431 011 1467888888888 9999999998876555544443
No 240
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.77 E-value=7.7e-18 Score=125.84 Aligned_cols=123 Identities=26% Similarity=0.503 Sum_probs=99.5
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.|..+......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 44578899999999999998988999999998875432 24799999999999999999999888777777
Q ss_pred EEEEecccC-CCeeec-CCceeEEecCCcEEEEEEeecCCCCcEEEEE----CCEEcCC
Q psy3045 212 ELKLGGRFD-PPVIKE-SFSDETLNPGPNYYFKCIASGNPTPEISWYL----DGKKLVN 264 (267)
Q Consensus 212 ~l~v~~~~~-~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~l~~ 264 (267)
.+.|..... +|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~ 165 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGP 165 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCT
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccC
Confidence 777764322 233333 3456788999999999999999999999999 7776643
No 241
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.77 E-value=5.3e-18 Score=124.29 Aligned_cols=116 Identities=16% Similarity=0.256 Sum_probs=88.2
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECC-ccCC-----CCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecc
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDG-KPVP-----DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 218 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~-~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~ 218 (267)
.+.+|+.+.|.|.+.|.|.+.+.|+++. .++. ......|.|.+++.+|+|.|.|.|.|..+.....+.|.|..
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~- 90 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYS- 90 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEB-
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEe-
Confidence 4458999999999999999999999842 2221 12345799999999999999999999887666667777764
Q ss_pred cCCCeeecCCceeEEecCCcEEEEEEeecCCC---CcEEEEECCEEcC
Q psy3045 219 FDPPVIKESFSDETLNPGPNYYFKCIASGNPT---PEISWYLDGKKLV 263 (267)
Q Consensus 219 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~l~ 263 (267)
.|..+...+. ..+.+|+.+.|.|.+.+.++ +.|.|+++|+.|.
T Consensus 91 -~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 91 -FPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp -CCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred -CCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 2322222223 56889999999999998644 3799999998764
No 242
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.77 E-value=4.7e-18 Score=125.61 Aligned_cols=124 Identities=15% Similarity=0.286 Sum_probs=94.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccCC---------------------CCCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPVP---------------------DHNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~~---------------------~~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ......|.|.+++.+|+|.|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYY 87 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEE
Confidence 44558899999999999999999999999853 1110 012247999999999999999
Q ss_pred EEEEcCCCC---ceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCCcEEEEECCEEcCC
Q psy3045 198 CVIRNEQES---AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEISWYLDGKKLVN 264 (267)
Q Consensus 198 C~~~~~~~~---~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~l~~ 264 (267)
|.+.+..+. ......+.|.....+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+++|+.+..
T Consensus 88 C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 88 CQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp EEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred EecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 999987652 22344555654446777766555445667999999999998 89899999999998864
No 243
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.76 E-value=2e-18 Score=130.07 Aligned_cols=169 Identities=22% Similarity=0.301 Sum_probs=106.8
Q ss_pred cccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCccee-----------ccccCCceEEEE-----eeEEEEee
Q psy3045 15 TFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRK-----------VAVPLNDRVKQV-----SGTLIIKE 74 (267)
Q Consensus 15 ~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~-----------~~~~~~~~~~~~-----~~~l~i~~ 74 (267)
.+...+ ..+.+.+|++|.|.|.+.+ +.|++...+.... .......|+... +.+|.|.+
T Consensus 4 ~v~~~p--~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 4 GVVQSP--RHIIKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCEEEC--SEEEEETTCCEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred ccccCc--ceeeecCCCcEEEEEEeCCCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 344444 6789999999999999877 9999943322111 111122344432 34799999
Q ss_pred cccCCCeeEEEEEEcCCC---ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 75 AKVEDSGKYLCVVNNSVG---GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
++.+|+|.|+|.+.+..+ .......|.|.........+... ...+....+..|+.
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~----------------------~~~~~~~~~~~g~~ 139 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVS----------------------LFEPSKAEIANKQK 139 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEE----------------------EECCCHHHHHHHSE
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeE----------------------EeCCchhhcccCCc
Confidence 999999999999984322 12333456665322111122111 01111123445899
Q ss_pred EEEEeEeCC-CCCc-eEEEEECCccCCCCC----------C------CeEEeccCCCCC-CeEEEEEEEcCCCCc
Q psy3045 152 AQFTCKYEG-NPVK-TISWMKDGKPVPDHN----------E------PVFRIDSVRKED-KGMYQCVIRNEQESA 207 (267)
Q Consensus 152 v~l~C~~~~-~p~~-~~~W~~~~~~~~~~~----------~------~~l~i~~~~~~d-~g~y~C~~~~~~~~~ 207 (267)
+.|.|.+.+ .|.+ .+.|+++|..+.... . +.|.|.....+| .|.|+|.|.|.....
T Consensus 140 v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 140 ATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp EEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred eEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 999999988 4545 899999998875321 1 237777777777 679999999876443
No 244
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=125.92 Aligned_cols=125 Identities=25% Similarity=0.501 Sum_probs=100.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.+.+..+.....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 34558889999999999999998999999999877532 23579999999999999999999988877777
Q ss_pred EEEEEecccC-CCeee-cCCceeEEecCCcEEEEEEeecCCCCcEEEEE----CCEEcCCC
Q psy3045 211 GELKLGGRFD-PPVIK-ESFSDETLNPGPNYYFKCIASGNPTPEISWYL----DGKKLVNA 265 (267)
Q Consensus 211 ~~l~v~~~~~-~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~l~~~ 265 (267)
..+.+..... +|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..+
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 162 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD 162 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTT
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCC
Confidence 7777764322 23333 34556678899999999999999999999999 88777544
No 245
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.76 E-value=8.6e-18 Score=120.37 Aligned_cols=118 Identities=14% Similarity=0.273 Sum_probs=91.5
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCce-EEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKT-ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
..+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ....|.|.+++.+|+|.|+|.+.+..+. ....+.|.
T Consensus 12 ~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~~~s--~~~~l~V~- 87 (175)
T 1fnl_A 12 LEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-QASSYFIDAATVNDSGEYRCQTNLSTLS--DPVQLEVH- 87 (175)
T ss_dssp EESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-SCSEEEESSCCGGGCEEEEEECSSSCCC--CCEEEEEE-
T ss_pred EcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-CceEEEEeCCCcccCEEEEEEeeCCccc--ccEEEEEe-
Confidence 334444788999999999999887665 889999988753 5679999999999999999999986543 34455554
Q ss_pred ccCCCeeecCCceeEEecCCcEEEEEEeecCCCC-cEEEEECCEEcC
Q psy3045 218 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWYLDGKKLV 263 (267)
Q Consensus 218 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~l~ 263 (267)
.++.+... ....+.+|+.+.|.|.+.+.+++ .+.|+++|..+.
T Consensus 88 --~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 88 --IGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131 (175)
T ss_dssp --CSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred --CCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc
Confidence 23333333 33568899999999999987765 999999998764
No 246
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.76 E-value=1.5e-18 Score=128.62 Aligned_cols=164 Identities=15% Similarity=0.206 Sum_probs=97.4
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc------------ccCCceEEE----EeeEEEEeecccCC
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA------------VPLNDRVKQ----VSGTLIIKEAKVED 79 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~------------~~~~~~~~~----~~~~l~i~~~~~~d 79 (267)
.++.+.+|++|+|.|.+.+ +.|++...+...... .....|+.. ...+|.|.+++.+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTED 86 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCccc
Confidence 5678999999999999853 999985433221111 112344443 23469999999999
Q ss_pred CeeEEEEEEcCCCc----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEE
Q psy3045 80 SGKYLCVVNNSVGG----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFT 155 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 155 (267)
+|.|+|.+.+..+. ......|.|.... ...+.... . +....+..|+.++|.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~----------------------~-~~~~~~~~g~~v~l~ 141 (215)
T 3nl4_H 87 TATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ--PKAPSVFP----------------------L-APCCGDTPSSTVTLG 141 (215)
T ss_dssp CEEEEEEEECSSSSCEEEECCCEEEEECSSC--CBCCEEEE----------------------E-CCCTTCCC--CEEEE
T ss_pred CEEEEEEEecCCCccceEEcCCEEEEEeCCC--cCCCEEEE----------------------e-cCCccccCCCcEEEE
Confidence 99999999987542 2223345554211 11111110 0 111134569999999
Q ss_pred eEeCCCC--CceEEEEECCccCCC-------CCCCeEEe---ccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 156 CKYEGNP--VKTISWMKDGKPVPD-------HNEPVFRI---DSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 156 C~~~~~p--~~~~~W~~~~~~~~~-------~~~~~l~i---~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
|.+.+.+ ...+.|++++..+.. .....+.+ ..+...| |.|+|.|.|..+.......
T Consensus 142 C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 142 CLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred EEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 9998864 346889999875431 11233333 3455667 9999999998876544433
No 247
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.76 E-value=6.4e-18 Score=129.58 Aligned_cols=171 Identities=20% Similarity=0.336 Sum_probs=107.4
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccC-----------Cc-eEEEE-----eeEEEE
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPL-----------ND-RVKQV-----SGTLII 72 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~-----------~~-~~~~~-----~~~l~i 72 (267)
+.+...+ ..+.+.+|++++|.|.+.+ +.|++...+......... .. |+... +.+|.|
T Consensus 28 ~~v~~~p--~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 28 MKVIQTP--RYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp CCCEEEC--SEEEEETTSCEEEEEECCTTCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred eeEEeCC--CeEEEcCCCCEEEEEEecCCCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 4455444 6789999999999999876 999985333221111100 01 43322 458999
Q ss_pred eecccCCCeeEEEEEEcCCC----ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 73 KEAKVEDSGKYLCVVNNSVG----GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 73 ~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+++.+|+|.|+|.+.+... .....+.|.|.........|.... ..+....+..
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~----------------------~~~~~~~~~~ 163 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAV----------------------FEPSEAEISH 163 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEE----------------------EECCHHHHHH
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEE----------------------ECCCcccccc
Confidence 99999999999999986422 122334566654222111222110 0011113345
Q ss_pred CCCEEEEeEeCC-CCCc-eEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEEEcCCC
Q psy3045 149 GRPAQFTCKYEG-NPVK-TISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVIRNEQE 205 (267)
Q Consensus 149 g~~v~l~C~~~~-~p~~-~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~~~~~~ 205 (267)
|+.++|.|.+.+ .|.+ .+.|+++|..+... .. ..|.+.....+| .|.|+|.|.|...
T Consensus 164 g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 164 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred CCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 899999999988 5655 89999999877531 11 235666666666 9999999999764
Q ss_pred Cce
Q psy3045 206 SAQ 208 (267)
Q Consensus 206 ~~~ 208 (267)
...
T Consensus 244 ~~~ 246 (270)
T 3qib_D 244 SEN 246 (270)
T ss_dssp CTT
T ss_pred CCc
Confidence 433
No 248
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.76 E-value=7.7e-18 Score=120.75 Aligned_cols=117 Identities=21% Similarity=0.348 Sum_probs=89.6
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCc-eEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecc
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVK-TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 218 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~ 218 (267)
.+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+.. ....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~--~~~l~V~-- 84 (176)
T 1f2q_A 10 NPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-TNSSLNIVNAKFEDSGEYKCQHQQVNESE--PVYLEVF-- 84 (176)
T ss_dssp ESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC-CSSEEEECSCCGGGCEEEEEECTTSSCCC--CEEEEEE--
T ss_pred CCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-CceEEEEeccceecCEEEEEEcCCccccc--cEEEEEe--
Confidence 3444578899999999999988764 7999999988753 57899999999999999999998866543 3444554
Q ss_pred cCCCeeecCCceeEEecCCcEEEEEEee-cCCCCcEEEEECCEEcC
Q psy3045 219 FDPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 263 (267)
Q Consensus 219 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~l~ 263 (267)
.++.+... ....+.+|+.+.|.|.+. +.|.+.+.|+++|+.+.
T Consensus 85 -~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 85 -SDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128 (176)
T ss_dssp -CSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC
T ss_pred -CcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe
Confidence 23333322 335788999999999995 56677999999999885
No 249
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=5.2e-18 Score=122.73 Aligned_cols=116 Identities=16% Similarity=0.318 Sum_probs=86.9
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCCCeEEecc-CCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCC-
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDS-VRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP- 222 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p- 222 (267)
....|+.+.|.|.+.+ +. .+.|+|+|..+....+..|.|.+ +..+|+|.|+|.|.|..+.....+.+.+.....+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~ 87 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKK 87 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEeccccccc
Confidence 4567999999999887 43 49999999999876778999999 99999999999999998875555555444322111
Q ss_pred --------------eeecC----Cce---eEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 223 --------------VIKES----FSD---ETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 223 --------------~~~~~----~~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
.+... ... ..+.+|+.+.|.|.+ |.|.|.|+|||+.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~ 148 (186)
T 1jbj_A 88 DAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPL 148 (186)
T ss_dssp CCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCS
T ss_pred ccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECccc
Confidence 00000 001 123489999999988 88999999999998643
No 250
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.75 E-value=2.8e-19 Score=131.69 Aligned_cols=155 Identities=15% Similarity=0.204 Sum_probs=93.9
Q ss_pred ecCCCeEEEEEEecc---------eeeeecccCcceecc---ccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCcc
Q psy3045 27 KPGGESFALLCEAQE---------NMWFKFIEGSSRKVA---VPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGE 94 (267)
Q Consensus 27 v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (267)
+.+|++++|.|.+.+ +.|++++........ .............|.|.+++.+|+|.|+|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 889999999999752 899996422110000 00111122334679999999999999999999987754
Q ss_pred EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC-ceEEEEECC
Q psy3045 95 SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTISWMKDG 172 (267)
Q Consensus 95 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~ 172 (267)
.....+.+ .......+.... ..... ....|+.+.|.|.+.|. |. +.+.|+++|
T Consensus 95 ~~~~~v~~--~~~~~~~P~v~~----------------------~~~~~-~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g 149 (207)
T 2vol_A 95 PIEKTISK--TKGRPKAPQVYT----------------------LPPPK-EQMAKDKVSLTCMITDFFPEDITVEWESNG 149 (207)
T ss_dssp CEEEEECC--CCCCCBCCEEEE----------------------ECCCT-GGGSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ceEEEecc--CCCCCcCCeEEE----------------------eCCCH-HHhcCCceEEEEEEeeEECCCCEEEEEECC
Confidence 22222211 001111111110 00000 11248899999999985 44 499999999
Q ss_pred ccCCCC--------CCC------eEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 173 KPVPDH--------NEP------VFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 173 ~~~~~~--------~~~------~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
..+... ... .|.+.....+|.|.|+|.|.|....
T Consensus 150 ~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 150 QPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 876431 111 2444444556789999999998644
No 251
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.75 E-value=6.1e-18 Score=127.79 Aligned_cols=169 Identities=24% Similarity=0.331 Sum_probs=105.1
Q ss_pred CcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceec-----------cccCC-ceEEEE-----eeEEEE
Q psy3045 14 PTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKV-----------AVPLN-DRVKQV-----SGTLII 72 (267)
Q Consensus 14 P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~-----------~~~~~-~~~~~~-----~~~l~i 72 (267)
+.+...+ ..+.+.+|++++|.|.... +.|++...+..... ...+. .|+... +.+|.|
T Consensus 3 ~~v~~~p--~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 3 PKVLQIP--SHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp CCCEEEC--SEEEEETTCCEEEEEECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred cceEeCC--ceEEecCCCCEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 3455555 6789999999999994433 99998422221100 01111 444432 348999
Q ss_pred eecccCCCeeEEEEEEcCC----CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 73 KEAKVEDSGKYLCVVNNSV----GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 73 ~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+++.+|+|.|+|.+.+.. ........|.|.........+... ...+....+..
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~----------------------~~~~~~~~~~~ 138 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVA----------------------VFEPSEAEISH 138 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEE----------------------EECCCHHHHHH
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEE----------------------EeCCCcccccC
Confidence 9999999999999998532 122334456665421111122111 01111113455
Q ss_pred CCCEEEEeEeCCC-CCc-eEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEEEcCCC
Q psy3045 149 GRPAQFTCKYEGN-PVK-TISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVIRNEQE 205 (267)
Q Consensus 149 g~~v~l~C~~~~~-p~~-~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~~~~~~ 205 (267)
|+.+.|.|.+.+. |.+ .+.|+++|..+... .. ..|.|.....+| .|.|+|.|.|...
T Consensus 139 g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 139 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 8999999999885 444 89999999877531 11 236777777777 8999999998764
Q ss_pred C
Q psy3045 206 S 206 (267)
Q Consensus 206 ~ 206 (267)
.
T Consensus 219 ~ 219 (245)
T 4ei6_B 219 S 219 (245)
T ss_dssp C
T ss_pred C
Confidence 4
No 252
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.75 E-value=7.1e-18 Score=129.19 Aligned_cols=180 Identities=18% Similarity=0.269 Sum_probs=105.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----------eeeeecccCcceeccc--------cCCceEEEE----eeEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----------NMWFKFIEGSSRKVAV--------PLNDRVKQV----SGTL 70 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----------~~W~~~~~~~~~~~~~--------~~~~~~~~~----~~~l 70 (267)
.+.+...| ..+.+.+|++++|.|.+.+ +.|++...+....... ....|+... ..+|
T Consensus 15 ~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L 92 (268)
T 1x9q_A 15 DVVMTQTP--LSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTL 92 (268)
T ss_dssp CCCEEEEC--SEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cceEEeeC--CeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEE
Confidence 35565555 6789999999999999742 8899864332111000 123444432 3489
Q ss_pred EEeecccCCCeeEEEEEEcCCCc-cEEEEEEEEEeccccc---cCCceEEEeCCCceEEEEEeecCCCcccccCCceEEE
Q psy3045 71 IIKEAKVEDSGKYLCVVNNSVGG-ESVETVLTVTAPLAAG---VEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTI 146 (267)
Q Consensus 71 ~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~---~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 146 (267)
.|.+++.+|+|.|+|.+.+..+. ......|.|...+... ..+... ...... ...+ ......+....+
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~-~~~~~~-~~~~-------~v~~~~~~~~~v 163 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDD-AKKDDA-KKDG-------GVKLDETGGGLV 163 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEC--------------------------CGG-------GCEEEEECCEEE
T ss_pred EECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCcccccccc-cccccc-cccc-------ceEEECCCceEe
Confidence 99999999999999999887542 1223455555432100 000000 000000 0000 000011223478
Q ss_pred ecCCCEEEEeEeCCCC--CceEEEEECC--ccC--------------------CCC----------CCCeEEeccCCCCC
Q psy3045 147 DFGRPAQFTCKYEGNP--VKTISWMKDG--KPV--------------------PDH----------NEPVFRIDSVRKED 192 (267)
Q Consensus 147 ~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~--------------------~~~----------~~~~l~i~~~~~~d 192 (267)
.+|++++|.|.+.+.+ .+.+.|++++ ..+ ... ....|.|.+++.+|
T Consensus 164 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 243 (268)
T 1x9q_A 164 QPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVED 243 (268)
T ss_dssp CTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 8999999999998875 3799999853 211 000 12479999999999
Q ss_pred CeEEEEEEEcC
Q psy3045 193 KGMYQCVIRNE 203 (267)
Q Consensus 193 ~g~y~C~~~~~ 203 (267)
+|.|.|.+.+.
T Consensus 244 sG~Y~C~a~~~ 254 (268)
T 1x9q_A 244 TGIYYCTGASY 254 (268)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEccC
Confidence 99999999874
No 253
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.75 E-value=1.4e-17 Score=121.93 Aligned_cols=117 Identities=12% Similarity=0.200 Sum_probs=91.4
Q ss_pred EEEecCCCEEEEeEeCCCCCceEEEEECCccCCC----------CCCCeEEeccCCCCCCeEEEEEEEcCC-----CCce
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD----------HNEPVFRIDSVRKEDKGMYQCVIRNEQ-----ESAQ 208 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~----------~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~ 208 (267)
..+.+|++++|.|.+.+ +.+.+.|+|+|..+.. .....|.|.+++.+|+|.|+|.+.+.. ....
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s 95 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPS 95 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCC
T ss_pred CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCC
Confidence 36789999999999874 6779999999987531 234679999999999999999998642 1223
Q ss_pred EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 209 ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 209 ~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
..+.|.|...+.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+.
T Consensus 96 ~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 148 (201)
T 1nkr_A 96 DPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHE 148 (201)
T ss_dssp CCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSC
T ss_pred CCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccC
Confidence 455677765556677776665 47889999999999986 568999999998764
No 254
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.75 E-value=5.4e-18 Score=124.72 Aligned_cols=123 Identities=21% Similarity=0.404 Sum_probs=95.1
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccC----------CC--C-----CCCeEEeccCCCCCCeEEEEEEEc
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV----------PD--H-----NEPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~----------~~--~-----~~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ .. . ....|.|.++..+|+|.|+|.+.+
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 89 (209)
T 1nbq_A 10 SEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSE 89 (209)
T ss_dssp SCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEE
T ss_pred CCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEec
Confidence 344557888999999999999899999999987662 10 1 137899999999999999999999
Q ss_pred CCCCce--EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEECCEEcCCC
Q psy3045 203 EQESAQ--ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 203 ~~~~~~--~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~l~~~ 265 (267)
..+... ....+.+. .+|.+........+.+|+.+.|.|.+ .+.|.|.+.|+++|+.+..+
T Consensus 90 ~~g~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~ 152 (209)
T 1nbq_A 90 EGGNSYGEVKVKLIVL---VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTN 152 (209)
T ss_dssp TTSSCEECCEEECCEE---BCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSC
T ss_pred CCCCccceEEEEEEEe---cCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCc
Confidence 865333 34455554 34544444445578899999999997 89999999999999888654
No 255
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.75 E-value=3.8e-17 Score=120.97 Aligned_cols=167 Identities=19% Similarity=0.249 Sum_probs=116.4
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
.+|.|. .+ ..+.+.+|+++.|.|.+.+ +.|++++.... .....++... ...|.|.++...|+|.
T Consensus 18 ~~P~~~-~p--~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~----~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 90 (215)
T 3mtr_A 18 YAPKLQ-GP--VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLP----SSNYSNIKIYNTPSASYLEVTPDSENDFGN 90 (215)
T ss_dssp EEEEEE-CC--SEEEECTTCCEEEEEEEEEESCCEEEEEETTEESS----CSSSCSEEEEEETTEEEEEECCCSGGGCEE
T ss_pred cCCccc-CC--ceEEEECCCCEEEEEEEeecCCCEEEEEECCeECC----CCCCccEEEecCCCeeEEEEecCChhhCeE
Confidence 468884 44 5689999999999999988 99999633211 1111233322 4689999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC---
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE--- 159 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~--- 159 (267)
|+|.+.|..|.....+.|.|...+.... ... ....+..+.|.|...
T Consensus 91 Y~C~a~n~~g~~~~~~~l~v~~~P~~p~---~~~----------------------------~~~~~~~~~l~w~~p~~~ 139 (215)
T 3mtr_A 91 YNCTAVNRIGQESLEFILVQADTPSSPS---IDQ----------------------------VEPYSSTAQVQFDEPEAT 139 (215)
T ss_dssp EEEEEECSSCEEEEEEEEEECCCCCCCE---EEE----------------------------EEEETTEEEEEEECCSCC
T ss_pred EEEEEEECCCceEEEEEEEECCCCCCCc---ceE----------------------------EEEecceEEEEEecCCcc
Confidence 9999999999888888888876544221 110 112356688888632
Q ss_pred -CCCCc--eEEEEECCccCCCC---------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 160 -GNPVK--TISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 160 -~~p~~--~~~W~~~~~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+.|.. .+.|.+++...-.. ....+.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 140 ~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 140 GGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp CSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred CCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 22333 47788877542111 12789999999999999999999999877665555543
No 256
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.75 E-value=2.7e-17 Score=124.26 Aligned_cols=164 Identities=23% Similarity=0.387 Sum_probs=104.0
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceecc----------ccCCceEEEE-----eeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVA----------VPLNDRVKQV-----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~----------~~~~~~~~~~-----~~~l~i~~~~~~d~G~ 82 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... ..+..|+... +.+|.|.+++.+|+|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 88 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGF 88 (245)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEE
Confidence 6789999999999999987 999994322211100 1122343322 3479999999999999
Q ss_pred EEEEEEcCCC-----c-cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 83 YLCVVNNSVG-----G-ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 83 Y~C~~~~~~~-----~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
|+|.+.+..+ . ....+.|.|.........+.... ..+....+..|+.+.|.|
T Consensus 89 Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~----------------------~~~~~~~~~~g~~~~l~C 146 (245)
T 3nfj_J 89 YLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAV----------------------FEPSEAEISHTQKATLVC 146 (245)
T ss_dssp EEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEE----------------------EECCHHHHHHHSEEEEEE
T ss_pred EEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEe----------------------ecCCcccccCCCceEEEE
Confidence 9999998322 1 22334566654221112222110 001111244589999999
Q ss_pred EeCCC-CCc-eEEEEECCccCCCC---------------CC-----CeEEeccCCCCC-CeEEEEEEEcCCCCce
Q psy3045 157 KYEGN-PVK-TISWMKDGKPVPDH---------------NE-----PVFRIDSVRKED-KGMYQCVIRNEQESAQ 208 (267)
Q Consensus 157 ~~~~~-p~~-~~~W~~~~~~~~~~---------------~~-----~~l~i~~~~~~d-~g~y~C~~~~~~~~~~ 208 (267)
.+.+. |++ .+.|+++|..+... +. ..|.|.....+| .|.|+|.|.|......
T Consensus 147 ~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 147 LATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred EEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 99885 433 79999999877531 11 256666666667 6699999999764433
No 257
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.75 E-value=2.5e-17 Score=129.69 Aligned_cols=125 Identities=21% Similarity=0.437 Sum_probs=96.7
Q ss_pred cCCceEEEecCCCEEEEeEeCCC-CCceEEEEECCccCCC-----------------------CCCCeEEeccCCCCCCe
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGN-PVKTISWMKDGKPVPD-----------------------HNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~-p~~~~~W~~~~~~~~~-----------------------~~~~~l~i~~~~~~d~g 194 (267)
..+....+.+|+.+.|.|.+.+. |.+.+.|++++.+... .....|.|.+++.+|+|
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G 87 (327)
T 2wng_A 8 QPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAG 87 (327)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCE
T ss_pred cCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCe
Confidence 44556689999999999999987 8889999998865320 23467999999999999
Q ss_pred EEEEEEEcCCCCce-----EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCCC
Q psy3045 195 MYQCVIRNEQESAQ-----ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVNA 265 (267)
Q Consensus 195 ~y~C~~~~~~~~~~-----~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~~ 265 (267)
.|+|.+.|..+... ....|.|.....+|.+.. + ...+.+|+.+.|.|.+.|.|++ .+.|+++|+.+..+
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~-~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~ 163 (327)
T 2wng_A 88 TYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSG-P-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 163 (327)
T ss_dssp EEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEEC-C-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred EEEEEeecCCCcceeEeecCcEEEEEEecCCCceeec-c-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc
Confidence 99999999765311 234666665444555552 2 3567899999999999998876 89999999988643
No 258
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.75 E-value=7e-18 Score=128.53 Aligned_cols=158 Identities=21% Similarity=0.262 Sum_probs=102.4
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|+++..+...... .....|+... +.+|.|.+++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 5778999999999999863 999997433211110 0123455432 3589999999
Q ss_pred cCCCeeEEEEEEcCCCcc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 77 VEDSGKYLCVVNNSVGGE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
.+|+|.|+|.+.+..+.. ...+.|.|.... ...|.... ..+. ..+..|+.++
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~v~~----------------------~~p~-~~v~~g~~v~ 148 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK--TTAPSVYP----------------------LAPV-CGDTTGSSVT 148 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSC--CBCCEEEE----------------------ECCC-CC--CCSEEE
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCC--CCCCeEEE----------------------eCCC-ccccCCCcEE
Confidence 999999999999864311 123456665311 01111110 0011 1345699999
Q ss_pred EEeEeCCC-CCc-eEEEEECCccCCCC------------CCCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 154 FTCKYEGN-PVK-TISWMKDGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 154 l~C~~~~~-p~~-~~~W~~~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
|.|.+.+. |.+ .+.|++++..+... ..+.|.|.....+| |.|+|.|.|....
T Consensus 149 L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 149 LGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 99999875 665 99999998765310 02457888887777 9999999997644
No 259
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.75 E-value=1.4e-17 Score=122.97 Aligned_cols=122 Identities=16% Similarity=0.315 Sum_probs=92.0
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEEC--CccCC---------------------CCCCCeEEeccCCCCCCeEEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKD--GKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--~~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~ 199 (267)
...+.+|+.+.|.|.+.+.+.+.+.|+++ +.... ......|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 55889999999999999889999999983 22110 11234699999999999999999
Q ss_pred EEcCCC---CceEEEEEEEeccc-CCCeeecCCceeEEecCCcEEEEEEeecC-CC-CcEEEEECCEEcCC
Q psy3045 200 IRNEQE---SAQASGELKLGGRF-DPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 264 (267)
Q Consensus 200 ~~~~~~---~~~~~~~l~v~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~l~~ 264 (267)
+.+..+ .......+.|.... .+|.+...+....+.+|+.+.|.|.+.|. |+ +.+.|+++|+.+..
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 999876 23334556665322 46777665555555689999999999986 44 39999999998864
No 260
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=1.6e-17 Score=120.41 Aligned_cols=115 Identities=15% Similarity=0.213 Sum_probs=89.0
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCC--------CCCCCeEEeccCCCCCCeEEEEEEEcCCCC--ceEEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQES--AQASGELK 214 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~--------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~ 214 (267)
.+.+|++++|.|.+.+. .+.+.|+|++..+. ......|.|.+++.+|+|.|+|.+.+..+. ....+.|.
T Consensus 14 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~ 92 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 92 (188)
T ss_dssp EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEE
Confidence 68889999999998753 46899999987642 234578999999999999999999886432 23355666
Q ss_pred EecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 215 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 215 v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
|...+.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+
T Consensus 93 V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 138 (188)
T 1oll_A 93 VTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDT-ATSMFLLLKEGRSS 138 (188)
T ss_dssp EESCSCCCEEEEESC-SEEETTCEEEEEEECSS-SCSEEEEEEESSSC
T ss_pred ecccCCCCeEEECCC-CccccCCEEEEEEEcCC-CCCEEEEEECCccc
Confidence 665445677766553 46889999999999875 45799999999765
No 261
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.74 E-value=2.9e-17 Score=124.69 Aligned_cols=161 Identities=19% Similarity=0.287 Sum_probs=100.1
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceecccc-----------CCc-eEEEEeeE---EEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVP-----------LND-RVKQVSGT---LIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~-----------~~~-~~~~~~~~---l~i~~~~~~d~G~ 82 (267)
..+.+.+|++++|.|.+.+ +.|++...+........ ... |+...... |.|.+++.+|+|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG~ 88 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRT 88 (253)
T ss_dssp SEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCEE
T ss_pred CeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCeE
Confidence 5788999999999998776 99998533322111110 112 44432211 9999999999999
Q ss_pred EEEEEEcCCCc------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 83 YLCVVNNSVGG------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 83 Y~C~~~~~~~~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
|+|.+.+..+. ......|.|.........|..... .+....+..|+.++|.|
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~----------------------~~~~~~~~~g~~~~L~C 146 (253)
T 3to4_D 89 LYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVF----------------------EPSEAEISHTQKATLVC 146 (253)
T ss_dssp EEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEE----------------------ECCHHHHHHHSEEEEEE
T ss_pred EEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEe----------------------CCChhhcccCCceEEEE
Confidence 99999866431 122335556542221122222100 01111223468899999
Q ss_pred EeCC-CCCc-eEEEEECCccCCCC--------------CC------CeEEeccCCCCC-CeEEEEEEEcCCC
Q psy3045 157 KYEG-NPVK-TISWMKDGKPVPDH--------------NE------PVFRIDSVRKED-KGMYQCVIRNEQE 205 (267)
Q Consensus 157 ~~~~-~p~~-~~~W~~~~~~~~~~--------------~~------~~l~i~~~~~~d-~g~y~C~~~~~~~ 205 (267)
.+.+ .|.+ .+.|+++|..+... .. +.|.+.....+| .|.|+|.|.|...
T Consensus 147 ~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 147 LATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp EEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 9998 4655 89999999877531 11 246666666666 6799999999753
No 262
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=121.91 Aligned_cols=124 Identities=23% Similarity=0.301 Sum_probs=95.8
Q ss_pred CceEEEecCCCEEEEeE-eCCCCC-ceEEEEECCccCCC---------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 141 PTVQTIDFGRPAQFTCK-YEGNPV-KTISWMKDGKPVPD---------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~-~~~~p~-~~~~W~~~~~~~~~---------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+....+.+|+.+.|.|. +.+.|. +.+.|++++..+.. .....|.|.++..+|+|.|+|.+.+..+....
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 94 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 94 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcch
Confidence 34558899999999999 888888 99999999987631 23577999999999999999999986644433
Q ss_pred ---EEEEEEecc----cCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCC
Q psy3045 210 ---SGELKLGGR----FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 210 ---~~~l~v~~~----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~ 264 (267)
...+.+... ..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 156 (201)
T 3s97_C 95 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS 156 (201)
T ss_dssp ECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT
T ss_pred hhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC
Confidence 222222211 1245555555577889999999999999999999999999987764
No 263
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.74 E-value=1.9e-17 Score=122.38 Aligned_cols=125 Identities=18% Similarity=0.327 Sum_probs=92.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--cC----------CC-----------CCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--PV----------PD-----------HNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~~----------~~-----------~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+++.|.|.+.+.|.+.+.|++++. .+ .. .....|.|.+++.+|+|.|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 445588999999999999999888999998532 11 00 11237999999999999999
Q ss_pred EEEEcCCCCceE-EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCCC
Q psy3045 198 CVIRNEQESAQA-SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 198 C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~~ 265 (267)
|.+.+..+.... ...+.|.....+|.+..........+|+.+.|.|.+.| .|++ .+.|+++|+.+..+
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 158 (213)
T 3d9a_L 88 CQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 158 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcce
Confidence 999987654322 33566654444677766444334457999999999987 5555 89999999988654
No 264
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.74 E-value=2.6e-17 Score=124.50 Aligned_cols=124 Identities=21% Similarity=0.393 Sum_probs=95.6
Q ss_pred CceEEEecCCCEEEEeEeCC---CCCceEEEEECCccCC--------------------------------------CCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEG---NPVKTISWMKDGKPVP--------------------------------------DHN 179 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~---~p~~~~~W~~~~~~~~--------------------------------------~~~ 179 (267)
+....+.+|+.+.|.|.+.+ .+.+.+.|++++.... ...
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 34558889999999999886 7788999999875430 001
Q ss_pred CCeEEeccCCCCCCeEEEEEEEcCCCCc-----eEEEEEEEecccCCCeeecC-CceeEEecCCcEEEEEEeecCCCCcE
Q psy3045 180 EPVFRIDSVRKEDKGMYQCVIRNEQESA-----QASGELKLGGRFDPPVIKES-FSDETLNPGPNYYFKCIASGNPTPEI 253 (267)
Q Consensus 180 ~~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~~~l~v~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~i 253 (267)
...|.|.+++.+|+|.|+|.+.+..+.. .....|.|.....+|.+... +....+.+|+.+.|.|.+.+.|.|.+
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 3589999999999999999999977643 33666777653334555443 34566778999999999999999999
Q ss_pred EEEECCEEcCC
Q psy3045 254 SWYLDGKKLVN 264 (267)
Q Consensus 254 ~W~~~~~~l~~ 264 (267)
.|+++|..+..
T Consensus 169 ~W~k~~~~~~~ 179 (250)
T 2fbo_J 169 TWYTGPTFFEN 179 (250)
T ss_dssp EEEEEEECSSC
T ss_pred EEEeCCCcccc
Confidence 99999987754
No 265
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.74 E-value=2.1e-17 Score=118.43 Aligned_cols=113 Identities=13% Similarity=0.241 Sum_probs=85.2
Q ss_pred EEecCCCEEEEeEeCC--CCCceEEEEECCccCC----------C------CCCCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 145 TIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVP----------D------HNEPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~--~p~~~~~W~~~~~~~~----------~------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+.+|+++.|.|.... .+.+.+.|+|++..+. . ..+..|.|.++..+|+|.|+|.+.|..+.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGT 86 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCC
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCC
Confidence 6788999999995433 5577999999985321 1 12456999999999999999999999887
Q ss_pred c--eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 207 A--QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 207 ~--~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
. ...+.|.|......|.+. ..+..+.|.|.+.|.|+|.|.|+++|+.+..+
T Consensus 87 ~~~~~~~~l~V~~~~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~ 139 (176)
T 1hng_A 87 RILNKALDLRILEMVSKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSL 139 (176)
T ss_dssp EEEEEEEEEEEECCCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEE
T ss_pred EEEEEEEEEEEeCCCCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCC
Confidence 6 555666665432233332 23456899999999999999999999988654
No 266
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.74 E-value=3.9e-17 Score=119.66 Aligned_cols=117 Identities=20% Similarity=0.319 Sum_probs=89.1
Q ss_pred ceEEEecCCCEEEEeEeCCCCC-----ceEEEEE-CCccCCCC------------CCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPV-----KTISWMK-DGKPVPDH------------NEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~-----~~~~W~~-~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
....+.+|+++.|.|.+.+.|. +.+.|++ ++...... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 3457889999999999998876 8999999 44332211 2367999999999999999999998
Q ss_pred CCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 204 QESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 204 ~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
.+.....+.|.|......|.+.. ..+.+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred CCcceEEEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 87666677777764333343332 23467999999999999999999999988654
No 267
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.74 E-value=1.5e-17 Score=126.33 Aligned_cols=158 Identities=19% Similarity=0.256 Sum_probs=89.2
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4678999999999999863 89999643322110 01123455432 3589999999
Q ss_pred cCCCeeEEEEEEcCCCc---------c----EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCce
Q psy3045 77 VEDSGKYLCVVNNSVGG---------E----SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTV 143 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---------~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 143 (267)
.+|+|.|+|.+.+..+. . ...+.|.|..... ..|. .....+ .
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~--~~P~----------------------v~~~~p-~ 142 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAST--KGPS----------------------VFPLAP-S 142 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCC--BCCE----------------------ECCCCC--
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCC--cCCc----------------------EEEecC-c
Confidence 99999999999987541 1 1224555553110 0010 000111 1
Q ss_pred EEEecCCCEEEEeEeCCC-CCc-eEEEEECCccCCC--------CCC-----CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGN-PVK-TISWMKDGKPVPD--------HNE-----PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~~~~--------~~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
..+..|+.++|.|.+.+. |.+ .+.|++++..+.. .++ +.|.|.....++ |.|+|.|.|....
T Consensus 143 ~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 143 SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp ----------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred ccccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 134568999999999886 766 9999999876421 111 235666666667 9999999997543
No 268
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.74 E-value=3.8e-19 Score=132.05 Aligned_cols=169 Identities=17% Similarity=0.228 Sum_probs=98.7
Q ss_pred cCCCcccCCCCceeEE--ecCCCeEEEEEEecc---------eeeeecccCcceec---cccCCceEEEEeeEEEEeecc
Q psy3045 11 FKAPTFSSVSDIIRFK--KPGGESFALLCEAQE---------NMWFKFIEGSSRKV---AVPLNDRVKQVSGTLIIKEAK 76 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~--v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~ 76 (267)
..+|.+...+ .... +.+|++++|.|.+.+ +.|++++....... ..............|.|.+++
T Consensus 7 ~~~p~v~~~p--p~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~ 84 (218)
T 2rgs_A 7 EGGPSVFIFP--PNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQD 84 (218)
T ss_dssp --CCEEEEEC--CCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHH
T ss_pred CCCCEEEEEC--cCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHH
Confidence 3456666655 3434 889999999999752 89999642211100 001111122234679999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.|..+.......+ .........+.... ..... ....|+.+.|.|
T Consensus 85 ~~D~g~Y~C~~~~~~~~~~~~~~v--~~~~~~~~~P~v~~----------------------~~~~~-~~~~g~~~~L~C 139 (218)
T 2rgs_A 85 WMSGKEFKCKVNNKDLPSPIERTI--SKIKGLVRAPQVYI----------------------LPPPA-EQLSRKDVSLTC 139 (218)
T ss_dssp HHTTCCEEEEEEETTCSSCEEEEE--CCCCCCCBCCEEEE----------------------ECCCG-GGTTSSEEEEEE
T ss_pred cCCCCeEEEEEECCcCCCcceEEE--eecCCCCCCCEEEE----------------------ECCCh-HHhcCCceEEEE
Confidence 999999999999886643111111 11001111111110 00000 112489999999
Q ss_pred EeCC-CCCc-eEEEEECCccCCCC--------CCCe------EEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 157 KYEG-NPVK-TISWMKDGKPVPDH--------NEPV------FRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 157 ~~~~-~p~~-~~~W~~~~~~~~~~--------~~~~------l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+.| .|.+ .+.|+++|..+... .... |.+.....+|.|.|+|.|.|....
T Consensus 140 ~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 140 LVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 9998 4655 99999999876421 1222 333333344689999999998754
No 269
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.73 E-value=6.8e-17 Score=118.83 Aligned_cols=119 Identities=13% Similarity=0.256 Sum_probs=92.9
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCC-------------------------CCCCeEEeccCCCCCCeEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD-------------------------HNEPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~-------------------------~~~~~l~i~~~~~~d~g~y~C~ 199 (267)
.+.+|+.+.|.|...+.+.+.+.|++++..... ..+..|.|.+++.+|+|.|+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~ 89 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLD 89 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEE
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEE
Confidence 788899999999988888889999987542210 1235799999999999999999
Q ss_pred EEcCC-CCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCCC
Q psy3045 200 IRNEQ-ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAE 266 (267)
Q Consensus 200 ~~~~~-~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~~ 266 (267)
+.+.. +.......+.|......|.+...... +.+|+.+.|.|.+.+.| |.+.|+++|..+..+.
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~ 154 (208)
T 3r4d_A 90 MTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTE 154 (208)
T ss_dssp EECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCS
T ss_pred EEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCC
Confidence 99985 44455666777654445666665544 78899999999999866 7999999999987543
No 270
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=3.2e-17 Score=120.89 Aligned_cols=125 Identities=17% Similarity=0.321 Sum_probs=91.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC--------------CC-------CCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~--------------~~-------~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+++.|.|.+.+.|.+.+.|++++ ..+ .. .....|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 45568899999999999999888899999843 221 00 11237999999999999999
Q ss_pred EEEEcCCCCceE-EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcCCC
Q psy3045 198 CVIRNEQESAQA-SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 198 C~~~~~~~~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~~~ 265 (267)
|.+.+..+.... ...+.|.....+|.+...+....+.+|+.+.|.|.+.|. |++ .|.|+++|+.+..+
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 157 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDG 157 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTT
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCC
Confidence 999987653222 335666543346776664433334579999999999974 444 89999999988654
No 271
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.73 E-value=2.2e-17 Score=122.23 Aligned_cols=160 Identities=16% Similarity=0.251 Sum_probs=100.3
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
..+.+.+|++++|.|.+.+ +.|+++..+..... ......|+... +.+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 5678999999999999874 99999643321110 01123455432 34899999999
Q ss_pred CCCeeEEEEEEcCCCc---cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 78 EDSGKYLCVVNNSVGG---ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
+|+|.|+|.+.+..+. ....+.|.|.... ...|... ...+ ...+..|+.+.|
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~--~~~P~i~----------------------~~~~-~~~~~~g~~v~L 142 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ--TTAPSVY----------------------PLAP-GCGDTTSSTVTL 142 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSC--CBCCCEE----------------------EECC-CSSCCCCSSEEE
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCC--CCCCeEE----------------------eccC-ChhhccCCcEEE
Confidence 9999999999876421 1223566665311 0111111 0001 112456999999
Q ss_pred EeEeCCC-CCc-eEEEEECCccCCCCC------CCeEE----eccCCCCCCeEEEEEEEcCCCCce
Q psy3045 155 TCKYEGN-PVK-TISWMKDGKPVPDHN------EPVFR----IDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 155 ~C~~~~~-p~~-~~~W~~~~~~~~~~~------~~~l~----i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.|.+.+. |.+ .+.|++++..+.... ...+. +.....++ |.|+|.|.|..+...
T Consensus 143 ~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~ 207 (215)
T 1c5d_H 143 GCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTK 207 (215)
T ss_dssp EEEEEEEBSSCCEEEEGGGTTCCSCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEE
T ss_pred EEEEeeeEcCCcEEEEccCCccCceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCcc
Confidence 9999986 777 999999987643110 11211 23333355 999999999876544
No 272
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.72 E-value=7.9e-17 Score=122.21 Aligned_cols=170 Identities=21% Similarity=0.334 Sum_probs=104.9
Q ss_pred cccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceecc-----------ccCCceEEEE-----eeEEEEee
Q psy3045 15 TFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVA-----------VPLNDRVKQV-----SGTLIIKE 74 (267)
Q Consensus 15 ~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~-----------~~~~~~~~~~-----~~~l~i~~ 74 (267)
.+...+ ..+.+.+|++++|.|.+.. +.|++...+...... .....|+... +.+|.|.+
T Consensus 5 ~v~q~p--~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 5 GITQSP--KYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp CEECSC--SEEEEETTCCEEECCEECSCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred cceEcC--CeEEEcCCCcEEEEEEeCCCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 444444 6889999999999999865 999996433211100 0123455442 35899999
Q ss_pred cccCCCeeEEEEEEcCCC---ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC
Q psy3045 75 AKVEDSGKYLCVVNNSVG---GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP 151 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~ 151 (267)
++.+|+|.|+|.+.+... .......|.|.........|.... ..+....+..|+.
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~----------------------~~~~~~~~~~g~~ 140 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAV----------------------FEPSEAEISHTQK 140 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEE----------------------ECCCHHHHHHHSE
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEE----------------------ECCChhhhccCCc
Confidence 999999999999988521 111223566654221111221110 0011112336899
Q ss_pred EEEEeEeCCC-CC-ceEEEEECCccCCCC--------------CCC------eEEeccCCCC-CCeEEEEEEEcCCCCce
Q psy3045 152 AQFTCKYEGN-PV-KTISWMKDGKPVPDH--------------NEP------VFRIDSVRKE-DKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 152 v~l~C~~~~~-p~-~~~~W~~~~~~~~~~--------------~~~------~l~i~~~~~~-d~g~y~C~~~~~~~~~~ 208 (267)
+.|.|.+.+. |. +.+.|+++|..+... ... .|.|...... +.|.|+|.+.|......
T Consensus 141 ~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 141 ATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp EEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred eEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 9999999885 64 599999998766421 111 2555554443 57899999999865443
No 273
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.72 E-value=5.6e-17 Score=119.80 Aligned_cols=124 Identities=15% Similarity=0.288 Sum_probs=92.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--cC--------------C-------CCCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--PV--------------P-------DHNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~~--------------~-------~~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++. .. . ......|.|.+++.+|+|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYY 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEE
Confidence 445588899999999999999889999998431 11 0 012347999999999999999
Q ss_pred EEEEcCCCC-ceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 198 CVIRNEQES-AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 198 C~~~~~~~~-~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
|.+.+..+. ......+.|.....+|.+...+....+..|+.+.|.|.+.|.+++ .+.|+++|+.+..
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 88 CQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 999886532 222345666444467777776655556678889999999986653 8999999998865
No 274
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.71 E-value=4.2e-18 Score=133.97 Aligned_cols=157 Identities=15% Similarity=0.220 Sum_probs=99.7
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceecc-----ccCCceEEEEeeEEEEeecccCCCeeEEEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKVA-----VPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVN 88 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 88 (267)
....+.+|+++.|.|.+.+ +.|++++. ...... .....++ ...+.|.|.++..+|+|.|+|.+.
T Consensus 121 ~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g-~~~~~~~~~~~~~~~g~~-~~~~~L~I~~~~~~D~G~Y~C~a~ 198 (323)
T 2wqr_A 121 SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASG-KPVNHSTRKEEKQRNGTL-TVTSTLPVGTRDWIEGETYQCRVT 198 (323)
T ss_dssp CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTC-CCCCCCCCEEEECTTSCE-EEEEEEECCHHHHHTTCCEEEEEE
T ss_pred CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCC-cccccccCCCccCCCCCE-EEEEEEEECHHHccCCCCEEEEEE
Confidence 4456889999999999754 67999632 111110 0112222 245689999999999999999999
Q ss_pred cCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC-ceE
Q psy3045 89 NSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTI 166 (267)
Q Consensus 89 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~ 166 (267)
|..+.... .+.|.........+..... .+.. ....|+.+.|.|.+.+. |. ..+
T Consensus 199 n~~~~~~~--~~~v~~~~~~~~~P~v~~~----------------------~~~~-~~~~g~~~~l~C~~~g~~p~~~~v 253 (323)
T 2wqr_A 199 HPHLPRAL--MRSTTKTSGPRAAPEVYAF----------------------ATPE-WPGSRDKRTLACLIQNFMPEDISV 253 (323)
T ss_dssp CTTSSSCE--EEEECCCCSCCBCCEEEEE----------------------ECCC-CTTCTTEEEEEEEEEEEBSSCCEE
T ss_pred CCCCCCCe--eeEEEccCCCCCCCEEEEe----------------------CCCh-HHhcCCcEEEEEEeeeeeCCCcEE
Confidence 87644322 2333211001111111100 0000 11238999999999884 43 389
Q ss_pred EEEECCccCCCC-----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 167 SWMKDGKPVPDH-----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 167 ~W~~~~~~~~~~-----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.|+++|..+... + .+.|.|..+..+|.|.|+|.|.|....
T Consensus 254 ~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 254 QWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 999999887532 1 135788888888999999999998765
No 275
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=7.4e-17 Score=120.66 Aligned_cols=162 Identities=17% Similarity=0.293 Sum_probs=101.7
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc------------ccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA------------VPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~------------~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
..+.+.+|++++|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++.
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (230)
T 1ypz_F 9 ISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEE 88 (230)
T ss_dssp SEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCG
T ss_pred CEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCCh
Confidence 6789999999999999864 899986433211100 0134565543 24899999999
Q ss_pred CCCeeEEEEEEcC--CCc--cEEEEEEEEEeccc-c--ccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCC
Q psy3045 78 EDSGKYLCVVNNS--VGG--ESVETVLTVTAPLA-A--GVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGR 150 (267)
Q Consensus 78 ~d~G~Y~C~~~~~--~~~--~~~~~~l~V~~~~~-~--~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~ 150 (267)
+|+|.|.|.+.+. ... ....+.|.|..... . ...+.. ....+....+..|+
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~----------------------~v~~p~~~~v~~g~ 146 (230)
T 1ypz_F 89 EDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKP----------------------TIFLPSVAETNLHK 146 (230)
T ss_dssp GGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCC----------------------CEECCCHHHHHHHS
T ss_pred hhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCc----------------------eEECCCchhhccCC
Confidence 9999999999874 111 11234566652110 0 000000 00011111345689
Q ss_pred CEEEEeEeCCC-CC-ceEEEEE-CCccCCCC--------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 151 PAQFTCKYEGN-PV-KTISWMK-DGKPVPDH--------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 151 ~v~l~C~~~~~-p~-~~~~W~~-~~~~~~~~--------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.++|.|.+.+. |. +.+.|++ +|..+... + .+.|.|..... + |.|+|.|.|......
T Consensus 147 ~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~ 218 (230)
T 1ypz_F 147 TGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGG 218 (230)
T ss_dssp CEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTT
T ss_pred cceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCc
Confidence 99999999876 64 6999999 88766432 1 13467766664 4 999999999876543
No 276
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.71 E-value=1.1e-16 Score=113.90 Aligned_cols=117 Identities=18% Similarity=0.342 Sum_probs=89.5
Q ss_pred CCceEEEecCCCEEEEeEeCCCC-CceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecc
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNP-VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 218 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~ 218 (267)
.+....+.+|+.+.|.|.+.+.| .+.+.|++++..+... ...+.+.+++.+|+|.|+|.+.+..... ...+.+.
T Consensus 10 ~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-~~~~~~~~~~~~d~G~Y~C~~~~~~~s~--~~~l~v~-- 84 (170)
T 3ry4_A 10 EPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-TQPSYRFKANNNDSGEYTCQTGQTSLSD--PVHLTVL-- 84 (170)
T ss_dssp ESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-CSSEEEEECCGGGCEEEEEEETTSBCCC--CEEEEEE--
T ss_pred CCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC-ccceEEEecccccCeEEEEEEeCCCceE--eEEEEEE--
Confidence 34444788999999999999886 6799999999988654 4556778899999999999999754433 4455554
Q ss_pred cCCCeeecCCceeEEecCCcEEEEEEee-cCCCCcEEEEECCEEcC
Q psy3045 219 FDPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLV 263 (267)
Q Consensus 219 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~l~ 263 (267)
.++.+...+ ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+.
T Consensus 85 -~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (170)
T 3ry4_A 85 -FEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK 128 (170)
T ss_dssp -CCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE
T ss_pred -CCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEcc
Confidence 234433333 44678999999999995 56668999999998764
No 277
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.71 E-value=4.3e-17 Score=122.61 Aligned_cols=162 Identities=22% Similarity=0.336 Sum_probs=99.9
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceecc-----------ccCCceEEE-----EeeEEEEeecccCCCee
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVA-----------VPLNDRVKQ-----VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~-----------~~~~~~~~~-----~~~~l~i~~~~~~d~G~ 82 (267)
..+.+.+|++|+|.|.+.. +.|+++..+...... ..+..|+.. .+.+|.|.+++.+|+|.
T Consensus 7 ~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (238)
T 1bec_A 7 RNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSV 86 (238)
T ss_dssp SEEEEETTCCEEEEEEESSCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEE
T ss_pred CeeEEeCCCcEEEEEEeCCCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEE
Confidence 6789999999999999865 999996433211100 012344433 23589999999999999
Q ss_pred EEEEEEcCCC---c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 83 YLCVVNNSVG---G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 83 Y~C~~~~~~~---~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
|+|.+.+..+ . ......|.|.........+.... ..+....+..|+.+.|.|.
T Consensus 87 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~----------------------~~~~~~~~~~g~~~~L~C~ 144 (238)
T 1bec_A 87 YFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSL----------------------FEPSKAEIANKQKATLVCL 144 (238)
T ss_dssp EEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEE----------------------ECCCSTTCSSSCSCSEEEE
T ss_pred EEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEE----------------------ECCChHHcccCCceEEEEE
Confidence 9999998642 1 11234566664321111221110 0111113456999999999
Q ss_pred eCCC-CC-ceEEEEECCccCCCCC----------CCeE------EeccCCCCC-CeEEEEEEEcCCCC
Q psy3045 158 YEGN-PV-KTISWMKDGKPVPDHN----------EPVF------RIDSVRKED-KGMYQCVIRNEQES 206 (267)
Q Consensus 158 ~~~~-p~-~~~~W~~~~~~~~~~~----------~~~l------~i~~~~~~d-~g~y~C~~~~~~~~ 206 (267)
+.+. |. +.+.|+++|..+.... ...+ .|......| .|.|+|.|.|....
T Consensus 145 ~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 145 ARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp EEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred EeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 9986 64 4999999998764321 1222 222222223 67899999997543
No 278
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.71 E-value=2.4e-16 Score=114.77 Aligned_cols=114 Identities=19% Similarity=0.296 Sum_probs=89.5
Q ss_pred EEEecCCCEEEEeEeCCCCCc--eEEEEECCccCCC----CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVK--TISWMKDGKPVPD----HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~--~~~W~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
..+..|+++.|.|.+ +.|.| .|.|++.+..+.. .....|.|.+++.+|+|.|.|.+.+..+....+..|.|.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~- 94 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY- 94 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE-
Confidence 478899999999999 88777 9999987655521 234679999999999999999999988776667777776
Q ss_pred ccCCCee-ecCCceeEEecCCcEEEEEEeecC-CC----CcEEEEECCEEcCC
Q psy3045 218 RFDPPVI-KESFSDETLNPGPNYYFKCIASGN-PT----PEISWYLDGKKLVN 264 (267)
Q Consensus 218 ~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~i~W~~~~~~l~~ 264 (267)
.+|.. ...+. .+.+|+.+ |.|.+.|. |. +.|.|||||+.|..
T Consensus 95 --~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 95 --AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp --BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred --ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 44433 22332 56778888 99999985 64 38999999999853
No 279
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.70 E-value=7.8e-17 Score=117.94 Aligned_cols=116 Identities=27% Similarity=0.426 Sum_probs=87.8
Q ss_pred EEecCCCEEEEeEeCC----CCCceEEEEECCccCC--------------------CCCCCeEEeccCCCCCCeEEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEG----NPVKTISWMKDGKPVP--------------------DHNEPVFRIDSVRKEDKGMYQCVI 200 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~----~p~~~~~W~~~~~~~~--------------------~~~~~~l~i~~~~~~d~g~y~C~~ 200 (267)
.+..|+++.|.|.+.+ .|.+.+.|++++..+. ......|.|.+++.+|+|.|+|.+
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 84 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVV 84 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEE
Confidence 6788999999999853 3567999999887651 123578999999999999999999
Q ss_pred EcCCCCce-----EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEee-cCCCCcEEEEECCEEcCC
Q psy3045 201 RNEQESAQ-----ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 201 ~~~~~~~~-----~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~l~~ 264 (267)
.+..+... ..+.|.|......|.+... ....|+.+.|.|.+. |.|.|.|.|+++|+.+..
T Consensus 85 ~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~ 150 (201)
T 1dr9_A 85 LKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA 150 (201)
T ss_dssp EECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECC
T ss_pred EcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECcc
Confidence 99765543 3555666543333444331 123588899999995 999999999999988764
No 280
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.70 E-value=4.5e-18 Score=127.35 Aligned_cols=169 Identities=12% Similarity=0.201 Sum_probs=100.9
Q ss_pred ccCCCcccC-CCCceeEEecCCCeEEEEEEecc--------eeeeecccCc-ceecc---ccCCceEEEEeeEEEEeecc
Q psy3045 10 GFKAPTFSS-VSDIIRFKKPGGESFALLCEAQE--------NMWFKFIEGS-SRKVA---VPLNDRVKQVSGTLIIKEAK 76 (267)
Q Consensus 10 ~~~~P~~~~-~~~~~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~-~~~~~---~~~~~~~~~~~~~l~i~~~~ 76 (267)
...+|.+.. .| ....+.+|++++|.|.+.+ +.|++++... ..... ...+..+ .....|.|.++.
T Consensus 9 ~~~~P~v~~~~p--~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~-~~~s~L~I~~~~ 85 (231)
T 2w59_A 9 SCSPIQLYAIPP--SPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTY-SASSAVPVSTQD 85 (231)
T ss_dssp ---CCEEEEECC--CHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCE-EEEEEEECCHHH
T ss_pred CCCCCEEEEeCc--ChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcE-EEEEEEEecchh
Confidence 344676553 33 5567889999999999753 7899864432 11000 0111222 245679999999
Q ss_pred cCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC 156 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 156 (267)
.+|+|.|+|.+.+..+.... .+.|.........+.... ..+.... ..++.+.|.|
T Consensus 86 ~~D~g~Y~C~~~~~~~~~~~--~~~v~~~~~~~~~P~v~v----------------------~~~~~~~-~~~~~~~L~C 140 (231)
T 2w59_A 86 WLSGERFTCTVQHEELPLPL--SKSVYRNTGPTTPPLIYP----------------------FAPHPEE-LSLSRVTLSC 140 (231)
T ss_dssp HHTTCCEEEEEECTTCSSCE--EEEECCCCSCCBCCEEEE----------------------ECCCGGG-GGSSEEEEEE
T ss_pred ccCCCEEEEEEEcCCCCCce--EEEEecCCCCCcCCEEEE----------------------eCCCHHH-hccCceEEEE
Confidence 99999999999987754332 233322110001111110 0000001 1245699999
Q ss_pred EeCCC-C-CceEEEEECCccCCCC-------------------C-C-----CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 157 KYEGN-P-VKTISWMKDGKPVPDH-------------------N-E-----PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 157 ~~~~~-p-~~~~~W~~~~~~~~~~-------------------~-~-----~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+.++ | .+.+.|++||..+... + . +.|.|.....+|.|.|+|.|.|....
T Consensus 141 ~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 141 LVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp EEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred EEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 99986 4 4799999999876421 1 1 23556666667799999999998754
No 281
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=2.3e-16 Score=113.77 Aligned_cols=105 Identities=25% Similarity=0.563 Sum_probs=84.8
Q ss_pred EEecCCCEEEEeEeCCCCCc--eEEEEECCccCCCCC----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecc
Q psy3045 145 TIDFGRPAQFTCKYEGNPVK--TISWMKDGKPVPDHN----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGR 218 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~--~~~W~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~ 218 (267)
.+.+|+.+.|.|.+.+.+.+ .+.|++++..+.... ...|.+. ..+|+|.|+|.+.|. ......+.|.
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~V~-- 81 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQLH-- 81 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEEEC--
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECC---cCcEEEEEEe--
Confidence 67889999999999887766 999999998875432 2345555 688999999999983 2345566665
Q ss_pred cCCCeeecCCceeEEecCCcEEEEEEeecCC-CCcEEEEE
Q psy3045 219 FDPPVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYL 257 (267)
Q Consensus 219 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~ 257 (267)
.+|.+...+....+.+|+.+.|.|.+.|.| .+.+.|++
T Consensus 82 -~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 82 -GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp -CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred -cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 577777777777889999999999999999 78999999
No 282
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=2.2e-16 Score=119.73 Aligned_cols=117 Identities=12% Similarity=0.219 Sum_probs=91.1
Q ss_pred EEEecCCCEEEEeEeCCCCCceEEEEECCccCC----------CCCCCeEEeccCCCCCCeEEEEEEEcCCC-----Cce
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQCVIRNEQE-----SAQ 208 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-----~~~ 208 (267)
..+.+|++++|.|.+.+ +.+.+.|+|++..+. ......|.|.+++.+|+|.|+|.+.+... ...
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S 94 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPS 94 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCC
T ss_pred CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccC
Confidence 36889999999999874 467899999987652 12346799999999999999999986431 223
Q ss_pred EEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 209 ASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 209 ~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
..+.|.|...+.+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+.
T Consensus 95 ~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 147 (257)
T 1b6u_A 95 DPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHE 147 (257)
T ss_dssp CCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCE
T ss_pred CCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccC
Confidence 456677766556788877665 367899999999999875 47999999997654
No 283
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.70 E-value=1e-16 Score=118.83 Aligned_cols=122 Identities=17% Similarity=0.397 Sum_probs=88.7
Q ss_pred eEEEecCCCEEEEeEeCCC-CCceEEEEECC--ccC--------------C-----------CCCCCeEEeccCCCCCCe
Q psy3045 143 VQTIDFGRPAQFTCKYEGN-PVKTISWMKDG--KPV--------------P-----------DHNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~-p~~~~~W~~~~--~~~--------------~-----------~~~~~~l~i~~~~~~d~g 194 (267)
...+.+|+++.|.|.+.+. |.+.+.|+++. ... . ......|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 5588899999999999988 88999999832 110 0 012345999999999999
Q ss_pred EEEEEEEcCCC-----CceEEEEEEEeccc-CCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCC
Q psy3045 195 MYQCVIRNEQE-----SAQASGELKLGGRF-DPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 195 ~y~C~~~~~~~-----~~~~~~~l~v~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~ 264 (267)
.|.|.+.+..+ .......|.|.... .+|.+...+.......|+.+.|.|.+.| .|++ .+.|+++|+.+..
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 166 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQ 166 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcC
Confidence 99999998765 22223456665322 4566665444444556889999999998 5666 8999999998865
No 284
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.70 E-value=2.6e-16 Score=114.46 Aligned_cols=122 Identities=13% Similarity=0.285 Sum_probs=88.3
Q ss_pred CceEEEecCCCEEEEeEeCC-CCCceEEEEECCccCC----C--------------------CCCCeEEeccCCCCCCeE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEG-NPVKTISWMKDGKPVP----D--------------------HNEPVFRIDSVRKEDKGM 195 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~~~~~~----~--------------------~~~~~l~i~~~~~~d~g~ 195 (267)
+....+.+|+++.|.|.+.+ .+.+.+.|++++..+. . ..+..|.|.+++.+|+|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 34457889999999999875 3557999999865321 0 124679999999999999
Q ss_pred EEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCC-cEEEEEEeecC-CCCcEEEEECCEEcCC
Q psy3045 196 YQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGP-NYYFKCIASGN-PTPEISWYLDGKKLVN 264 (267)
Q Consensus 196 y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~i~W~~~~~~l~~ 264 (267)
|.|.+.+..+.....+.|.|......|.+.... .....|. .+.|.|.+.|. |.|.|.|+++|+.+..
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~ 153 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS 153 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES
T ss_pred EEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC
Confidence 999999988766666677775432234444433 1233455 79999999985 4789999999987643
No 285
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=1.2e-16 Score=122.36 Aligned_cols=154 Identities=20% Similarity=0.340 Sum_probs=85.8
Q ss_pred cccCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 75 AKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
..+.|.+.|.|.+.+..|.......+.|... +....+.+|++++|
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~-----------------------------------p~~v~v~~G~~v~L 47 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQT-----------------------------------PRYLVKGQGQKAKM 47 (270)
T ss_dssp -------------------------CCCEEE-----------------------------------CSEEEEETTSCEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeC-----------------------------------CCeEEEcCCCCEEE
Confidence 3577899999999887665433333333221 22337888999999
Q ss_pred EeEeCCCCCceEEEEECC--cc------------------------C--CCCCCCeEEeccCCCCCCeEEEEEEEcCCC-
Q psy3045 155 TCKYEGNPVKTISWMKDG--KP------------------------V--PDHNEPVFRIDSVRKEDKGMYQCVIRNEQE- 205 (267)
Q Consensus 155 ~C~~~~~p~~~~~W~~~~--~~------------------------~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~- 205 (267)
.|.+.+ +.+.+.|+|.. .. + .......|.|.+++.+|+|.|.|.+.+...
T Consensus 48 ~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~ 126 (270)
T 3qib_D 48 RCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQ 126 (270)
T ss_dssp EEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTC
T ss_pred EEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCc
Confidence 999865 66799999822 10 0 012346899999999999999999986421
Q ss_pred ---CceEEEEEEEec---ccCCCeeec-CCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCC
Q psy3045 206 ---SAQASGELKLGG---RFDPPVIKE-SFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 206 ---~~~~~~~l~v~~---~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~ 264 (267)
.......+.|.. ...+|.+.. .+....+..|+.+.|.|.+.| .|.+ .+.|+++|+.+..
T Consensus 127 ~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 127 DTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp CCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred cceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCC
Confidence 111233455543 122455443 233334556999999999998 6666 8999999998864
No 286
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.70 E-value=1.1e-16 Score=118.05 Aligned_cols=120 Identities=14% Similarity=0.235 Sum_probs=89.5
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEEC--CccCC---------------------CCCCCeEEeccCCCCCCeEEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKD--GKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--~~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~ 199 (267)
...+.+|+.+.|.|.+. +.+.+.|+++ +..+. ......|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 55888999999999988 8889999994 22211 01234699999999999999999
Q ss_pred EEcCCC--CceEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEECCEEcCC
Q psy3045 200 IRNEQE--SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLDGKKLVN 264 (267)
Q Consensus 200 ~~~~~~--~~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~~~l~~ 264 (267)
+.+..+ .......+.|... ..+|.+...+....+.+|+.+.|.|.+.|.+ .+.+.|+++|+.+..
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 999876 2333455666522 2467776655444455799999999999864 468999999998854
No 287
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.69 E-value=3.8e-16 Score=132.36 Aligned_cols=156 Identities=21% Similarity=0.367 Sum_probs=107.1
Q ss_pred eeEEecCCCeEEEEEEe-cc-----eeeeecccCcceecc------ccCCceEE-EEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 23 IRFKKPGGESFALLCEA-QE-----NMWFKFIEGSSRKVA------VPLNDRVK-QVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~-~~-----~~W~~~~~~~~~~~~------~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
....+.+|++++|.|.+ .+ +.|++++........ ..+..|.. ..+++|.|.+++.+|+|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 56889999999999999 44 999997431111000 01122222 2345899999999999999999999
Q ss_pred CCCcc-EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCC-EEEEeEeCC-CCCceE
Q psy3045 90 SVGGE-SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRP-AQFTCKYEG-NPVKTI 166 (267)
Q Consensus 90 ~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~-v~l~C~~~~-~p~~~~ 166 (267)
..+.. ...+.|.|...+.. +... .....+..|+. +.|.|.+.+ .|.+.+
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~---p~i~-------------------------~~~~~~~~~~~~~~l~C~~~~~~P~~~i 505 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGK---PEIV-------------------------DSASELTAGVPNKVGTCVSEGSYPAGTL 505 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCC---CEEE-------------------------SCCSEECTTSCEEEEEEEEEEEBSCCEE
T ss_pred CCCceeEEEEEEEEEcCCCC---CEEE-------------------------cCCcccccCCceeEEEEECCCCCCCCeE
Confidence 88876 77788888764431 1111 00113445555 466999988 589999
Q ss_pred EEEECCccCCCCCC--------------------CeEEeccCC-CCCCeEEEEEEEcCCCC
Q psy3045 167 SWMKDGKPVPDHNE--------------------PVFRIDSVR-KEDKGMYQCVIRNEQES 206 (267)
Q Consensus 167 ~W~~~~~~~~~~~~--------------------~~l~i~~~~-~~d~g~y~C~~~~~~~~ 206 (267)
.|++|+..+..... +.|.|..+. .++.|.|+|.|+|....
T Consensus 506 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 506 SWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 99999988753211 357788777 44478999999998643
No 288
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.69 E-value=3.9e-17 Score=122.33 Aligned_cols=166 Identities=16% Similarity=0.233 Sum_probs=99.7
Q ss_pred eeEEecCCCeEEEEEEecc-------e--eeeecccCcceec---------------cccCCceEEEE------eeEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-------N--MWFKFIEGSSRKV---------------AVPLNDRVKQV------SGTLII 72 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~--~W~~~~~~~~~~~---------------~~~~~~~~~~~------~~~l~i 72 (267)
..+.+.+|++|+|.|.+.+ + .|++...+..... ......|+... ..+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 4568999999999999864 5 9998533221110 01123455432 236999
Q ss_pred eecccCCCeeEEEEEEcCCC--------ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceE
Q psy3045 73 KEAKVEDSGKYLCVVNNSVG--------GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQ 144 (267)
Q Consensus 73 ~~~~~~d~G~Y~C~~~~~~~--------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 144 (267)
.+++.+|+|.|.|.+.+..+ .......|.|.... ...+... ......
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~-----------------------~~~~~~ 142 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS--TKGPSVF-----------------------PLAPSS 142 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC--CBCCEEE-----------------------EECC--
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC--CCCCEEE-----------------------Eecccc
Confidence 99999999999999986521 11222345554211 1111111 001111
Q ss_pred EEecCCCEEEEeEeCCC-C-CceEEEEECCccCC--------CCCC-----CeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 145 TIDFGRPAQFTCKYEGN-P-VKTISWMKDGKPVP--------DHNE-----PVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~--------~~~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
.+..|+.++|.|.+.+. | ...+.|++++..+. ..+. +.|.|......| |.|+|.|.|..+....
T Consensus 143 ~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~ 221 (232)
T 3qhz_H 143 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 221 (232)
T ss_dssp -----CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccE
Confidence 44569999999999875 3 34788999886432 1111 357788777788 9999999998766554
Q ss_pred EEEEE
Q psy3045 210 SGELK 214 (267)
Q Consensus 210 ~~~l~ 214 (267)
...+.
T Consensus 222 ~~~l~ 226 (232)
T 3qhz_H 222 DKRVE 226 (232)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 44443
No 289
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.69 E-value=1.3e-16 Score=117.83 Aligned_cols=124 Identities=15% Similarity=0.327 Sum_probs=88.9
Q ss_pred CceEEEecCCCEEEEeEeCCCC---CceEEEEECC--ccC--------------CC-------CCCCeEEeccCCCCCCe
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP---VKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p---~~~~~W~~~~--~~~--------------~~-------~~~~~l~i~~~~~~d~g 194 (267)
+....+.+|+++.|.|.+.+.| .+.+.|++++ ..+ .. .....|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 4455889999999999999877 4789999863 221 00 12247999999999999
Q ss_pred EEEEEEEcCCCCc-eEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 195 MYQCVIRNEQESA-QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 195 ~y~C~~~~~~~~~-~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
.|.|.+.+..+.. .....+.|... ..+|.+...+.......|+.+.|.|.+.|.+++ .|.|+++|+.+..
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 9999999876432 12334555322 246776654443344578999999999986543 8999999998864
No 290
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.69 E-value=1.7e-16 Score=119.13 Aligned_cols=124 Identities=13% Similarity=0.277 Sum_probs=91.8
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--cCC---------------------CCCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--PVP---------------------DHNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~~~---------------------~~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+++.|.|.+.+.+.+.+.|++++. ... ......|.|.+++.+|+|.|.
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 110 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYY 110 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEE
Confidence 445588899999999999988888999998431 110 012356999999999999999
Q ss_pred EEEEcCCCCc-eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecC-C-CCcEEEEECCEEcCC
Q psy3045 198 CVIRNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-P-TPEISWYLDGKKLVN 264 (267)
Q Consensus 198 C~~~~~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~l~~ 264 (267)
|.+.+..+.. .....+.|.....+|.+...+....+.+|+.+.|.|.+.+. | .+.+.|+++|..+..
T Consensus 111 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 111 CQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp EEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred EeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 9998865421 22345566544567777665544445568899999999984 4 479999999998864
No 291
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.68 E-value=3.6e-16 Score=115.75 Aligned_cols=125 Identities=13% Similarity=0.236 Sum_probs=87.7
Q ss_pred CceEEEecCCCEEEEeEe-CCCC-CceEEEEECCc--cCC----------C-----------CCCCeEEeccCCCCCCeE
Q psy3045 141 PTVQTIDFGRPAQFTCKY-EGNP-VKTISWMKDGK--PVP----------D-----------HNEPVFRIDSVRKEDKGM 195 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~-~~~p-~~~~~W~~~~~--~~~----------~-----------~~~~~l~i~~~~~~d~g~ 195 (267)
+....+.+|+++.|.|.+ .+.+ .+.+.|++++. .+. . .....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 445688999999999995 4443 57999999542 210 0 112379999999999999
Q ss_pred EEEEEEcCCCC--ceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCCC
Q psy3045 196 YQCVIRNEQES--AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 196 y~C~~~~~~~~--~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~~ 265 (267)
|.|.+.+..+. ......+.|.....+|.+...+.......|+.+.|.|.+.| .|++ .|.|+++|+.+..+
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 160 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCC
Confidence 99999997651 12234556654335677665333223346889999999998 4554 89999999988654
No 292
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=2.8e-16 Score=115.54 Aligned_cols=151 Identities=23% Similarity=0.309 Sum_probs=96.3
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceeccc------cCCceEEEE-------eeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAV------PLNDRVKQV-------SGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~------~~~~~~~~~-------~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+.+|++++|.|.+.+ +.|++...+....... ....|+... ..+|.|.+++.+|+|.|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (207)
T 1ypz_E 9 SALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFC 88 (207)
T ss_dssp SEEEEETTCCEEEEEEESSCCSEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEE
T ss_pred CeEEEccCCcEEEEEEEeCCCeEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEE
Confidence 6789999999999999987 9999964332111110 123444432 2489999999999999999
Q ss_pred EEEcCCC---------c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEE
Q psy3045 86 VVNNSVG---------G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQF 154 (267)
Q Consensus 86 ~~~~~~~---------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l 154 (267)
.+.+..+ . ....+.|.|.........|.. .+..+ .+.|
T Consensus 89 ~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v------------------------------~~~~~-~~~l 137 (207)
T 1ypz_E 89 AADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSV------------------------------FIMKN-GTNV 137 (207)
T ss_dssp EEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEE------------------------------EEEEE-TTEE
T ss_pred EEecCCcccccccccceeeecCccEEEEccCCCCCCCCeE------------------------------EEeCC-CCeE
Confidence 9987642 1 112356666643221112211 11112 3799
Q ss_pred EeEeCCC-CC-ceEEEEECCccCCCC-------CCCeEEeccCCC-CCCeEEEEEEEcCCC
Q psy3045 155 TCKYEGN-PV-KTISWMKDGKPVPDH-------NEPVFRIDSVRK-EDKGMYQCVIRNEQE 205 (267)
Q Consensus 155 ~C~~~~~-p~-~~~~W~~~~~~~~~~-------~~~~l~i~~~~~-~d~g~y~C~~~~~~~ 205 (267)
.|.+.+. |. +.+.|+++ ..+... ....+.+..... ++.|.|+|.+.|..+
T Consensus 138 ~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 138 ACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EEEEEEESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred EEEEeeEeCCCeEEEEecC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 9999875 54 79999998 655321 224444444443 678999999999764
No 293
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.68 E-value=3.1e-16 Score=118.56 Aligned_cols=118 Identities=17% Similarity=0.311 Sum_probs=85.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCce-----EEEEECCccCC---------------------------CCCCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKT-----ISWMKDGKPVP---------------------------DHNEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~-----~~W~~~~~~~~---------------------------~~~~~~l~i~~~ 188 (267)
+....+..|+++.|.|.+.+.|.+. +.|++++.... ......|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3445788999999999998877654 99999643321 012345999999
Q ss_pred CCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEc
Q psy3045 189 RKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKL 262 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l 262 (267)
+.+|+|.|+|.+.+..+.......|.|. .+|.+...+.. ....|+.+.|.|.+.| .|.| .|.|+++|+.+
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~---~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVV---ASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE---BCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEe---cCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 9999999999999987766666777776 46776665543 3456788889999998 7888 99999999643
No 294
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.68 E-value=7e-18 Score=126.82 Aligned_cols=156 Identities=17% Similarity=0.254 Sum_probs=93.1
Q ss_pred ecCCCeEEEEEEecc---------eeeeecccCcceec---cccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCcc
Q psy3045 27 KPGGESFALLCEAQE---------NMWFKFIEGSSRKV---AVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGE 94 (267)
Q Consensus 27 v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (267)
+.+|++++|.|.+.+ +.|++++....... ..............|.|.++..+|+|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 789999999999752 89999642211100 001111222345689999999999999999999987754
Q ss_pred EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC-ceEEEEECC
Q psy3045 95 SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTISWMKDG 172 (267)
Q Consensus 95 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~ 172 (267)
.....+. ........+.... ..... ....|+.+.|.|.+.|. |. ..+.|++||
T Consensus 109 ~~~~~v~--~~~~~~~~P~v~v----------------------~~~~~-~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g 163 (239)
T 1i1c_A 109 PIEKSIS--KPEGTPRGPQVYT----------------------MAPPK-EEMTQSQVSITCMVKGFYPPDIYTEWKMNG 163 (239)
T ss_dssp CEEEEEC--CCSSCCBCCEEEE----------------------ECCCG-GGGGSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CcEEEEe--cCCCCCcCCEEEE----------------------ECCCh-HHhcCCcEEEEEEEeeeECCCeEEEEEECC
Confidence 2222221 1011111111110 00000 11247889999999985 54 489999999
Q ss_pred ccCCCC--------CCCe------EEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 173 KPVPDH--------NEPV------FRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 173 ~~~~~~--------~~~~------l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
..+... .... |.+.....++.|.|+|.|.|.....
T Consensus 164 ~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 164 QPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLEN 212 (239)
T ss_dssp EECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred EECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCCC
Confidence 877431 1122 3333333446899999999987543
No 295
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=3.7e-16 Score=117.57 Aligned_cols=116 Identities=15% Similarity=0.198 Sum_probs=89.3
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCC--------CCCCCeEEeccCCCCCCeEEEEEEEcCCCC--ceEEEEEE
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP--------DHNEPVFRIDSVRKEDKGMYQCVIRNEQES--AQASGELK 214 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~--------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~ 214 (267)
.+.+|++++|.|.+.+ +...+.|+|++..+. ......|.|.+++.+|+|.|+|.+.+..+. ....+.|.
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~ 95 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 95 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEE
Confidence 6889999999999865 356899999987542 234568999999999999999999876432 23356666
Q ss_pred EecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 215 LGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 215 v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
|...+.+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|+.+.
T Consensus 96 V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 142 (242)
T 1p6f_A 96 VTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSH 142 (242)
T ss_dssp EECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCE
T ss_pred eecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccC
Confidence 765455777776553 468899999999998754 46999999997653
No 296
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.67 E-value=4.6e-17 Score=129.29 Aligned_cols=117 Identities=16% Similarity=0.332 Sum_probs=94.8
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCC-------CCCCCeEEeccCCCCCCe-EEEEEEEcCCCCceEEEEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP-------DHNEPVFRIDSVRKEDKG-MYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~-------~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~~~~l 213 (267)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ......|.|.++..+|+| .|+|.|.|..+.......+
T Consensus 166 ~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l 245 (347)
T 2ifg_A 166 PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQV 245 (347)
T ss_dssp CSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECC
T ss_pred CceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEE
Confidence 34478889999999999999999999999987643 224578999999999999 9999999998777666655
Q ss_pred EEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcCCC
Q psy3045 214 KLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 214 ~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~~ 265 (267)
.|. .+|.+ ......+|+.+.|.|.+.|.|.|.|.|+++|+.+..+
T Consensus 246 ~V~---~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~ 290 (347)
T 2ifg_A 246 NVS---FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNET 290 (347)
T ss_dssp CCB---EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred EEc---CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCC
Confidence 554 35554 1123457999999999999999999999999998754
No 297
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.67 E-value=1.7e-15 Score=112.50 Aligned_cols=119 Identities=17% Similarity=0.354 Sum_probs=85.9
Q ss_pred CceEEEecCCCEEEEeEeCCCC-----CceEEEEECCccC---------C------------------CCCCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP-----VKTISWMKDGKPV---------P------------------DHNEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p-----~~~~~W~~~~~~~---------~------------------~~~~~~l~i~~~ 188 (267)
+....+..|+++.|.|.+.+.| ...+.|++++..+ . ......|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 3444788899999999987765 3489999964211 0 001247999999
Q ss_pred CCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEEC-CEEcC
Q psy3045 189 RKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD-GKKLV 263 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-~~~l~ 263 (267)
+.+|+|.|+|.+.+ .+.......|.|......|... ....+.+|+.+.|.|.+.|.|.|.+.|+++ |..+.
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~---~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQR---ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEE---EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCce---eeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 99999999999999 5555556677776322222211 112567899999999999999999999998 65554
No 298
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.67 E-value=3.4e-16 Score=115.43 Aligned_cols=115 Identities=20% Similarity=0.359 Sum_probs=88.1
Q ss_pred ceEEEecCCCEEEEeEeCCCC----CceEEEEEC----------------CccCCC-----------------CCCCeEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNP----VKTISWMKD----------------GKPVPD-----------------HNEPVFR 184 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p----~~~~~W~~~----------------~~~~~~-----------------~~~~~l~ 184 (267)
....+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+.. .....|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 344788999999999998876 469999983 322210 1246799
Q ss_pred eccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEECC
Q psy3045 185 IDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDG 259 (267)
Q Consensus 185 i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~ 259 (267)
|.+++.+|+|.|+|.+.+..+.......|.|.. +|.+........+.+|+.+.|.|.+ .+.|.|.+.|++++
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~---~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV---KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC---CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEc---CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 999999999999999999887777777777763 3443333333357789999999999 89999999999954
No 299
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.67 E-value=4.3e-16 Score=115.12 Aligned_cols=119 Identities=20% Similarity=0.190 Sum_probs=85.4
Q ss_pred ceEEEecC--CCEEEEeEeCCCCCceEEEEEC---CccCCCC------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE-
Q psy3045 142 TVQTIDFG--RPAQFTCKYEGNPVKTISWMKD---GKPVPDH------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA- 209 (267)
Q Consensus 142 ~~~~~~~g--~~v~l~C~~~~~p~~~~~W~~~---~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~- 209 (267)
....+.+| +.+.|.|.+.+ |.+.+.|+++ +..+... ....|.|.+++.+|+|.|+|.|.|..+....
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~ 93 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSI 93 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECC
T ss_pred eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEE
Confidence 45588899 99999999976 7789999884 5554432 3467999999999999999999985443222
Q ss_pred EEEEEEecccCCCeeecCC-ceeEEecCCcEEEEEEeecCCC--CcEEEEECCEEc
Q psy3045 210 SGELKLGGRFDPPVIKESF-SDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKL 262 (267)
Q Consensus 210 ~~~l~v~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~l 262 (267)
.+.+.+.. ..+|.+...+ ....+.+|+.+.|.|.+.|.|. +.+.|+++|+.+
T Consensus 94 ~~~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~ 148 (213)
T 2x1w_L 94 MYIVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148 (213)
T ss_dssp CEEEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSC
T ss_pred EEEEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCcc
Confidence 24555533 2344444444 3348899999999999998654 479999998764
No 300
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.67 E-value=2e-16 Score=117.42 Aligned_cols=120 Identities=18% Similarity=0.384 Sum_probs=87.6
Q ss_pred eEEEecCCCEEEEeEeCCCC--CceEEEEEC--CccCC------------------C----------CCCCeEEeccCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEGNP--VKTISWMKD--GKPVP------------------D----------HNEPVFRIDSVRK 190 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~--~~~~~------------------~----------~~~~~l~i~~~~~ 190 (267)
...+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. . .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (219)
T 1c1e_H 9 PELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKN 88 (219)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 34788999999999998875 679999997 33221 0 1125799999999
Q ss_pred CCCeEEEEEEEcCCCCc----eEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEc
Q psy3045 191 EDKGMYQCVIRNEQESA----QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKL 262 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~~~----~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l 262 (267)
+|+|.|.|.+.+..+.. .....+.|... ..+|.+........+.+|+.+.|.|.+.| .|.| .|.|+++|..+
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 167 (219)
T 1c1e_H 89 EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 167 (219)
T ss_dssp GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCccc
Confidence 99999999999876321 12345566531 23465554333335678999999999998 8988 99999999764
No 301
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.67 E-value=1.3e-16 Score=120.64 Aligned_cols=164 Identities=19% Similarity=0.255 Sum_probs=98.3
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++
T Consensus 7 ~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (248)
T 3u2s_H 7 GGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLR 86 (248)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 5788999999999999853 999986433221111 1223455432 2369999999
Q ss_pred cCCCeeEEEEEEcCCC----------------------ccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCC
Q psy3045 77 VEDSGKYLCVVNNSVG----------------------GESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPP 134 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~----------------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 134 (267)
.+|+|.|.|.+.+..+ .....+.|.|... ....+...
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~--~~~~P~v~------------------- 145 (248)
T 3u2s_H 87 VEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSA--STKGPSVF------------------- 145 (248)
T ss_dssp GGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSC--CCBCCEEE-------------------
T ss_pred HHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEccc--CCCCCEEE-------------------
Confidence 9999999999986311 0111233344311 00111111
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCC-C-CceEEEEECCccCC--------CCC-----CCeEEeccCCCCCCeEEEEE
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGN-P-VKTISWMKDGKPVP--------DHN-----EPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~--------~~~-----~~~l~i~~~~~~d~g~y~C~ 199 (267)
..+....+..|+.++|.|.+.+. | ...+.|++++..+. ..+ .+.|.+.....++ |.|+|.
T Consensus 146 ----~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~ 220 (248)
T 3u2s_H 146 ----PLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICN 220 (248)
T ss_dssp ----EECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEE
T ss_pred ----EeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEE
Confidence 01111234568999999999874 5 45899999886432 111 1356777777777 999999
Q ss_pred EEcCCCCceEEEE
Q psy3045 200 IRNEQESAQASGE 212 (267)
Q Consensus 200 ~~~~~~~~~~~~~ 212 (267)
|.|..........
T Consensus 221 v~h~~~~~~~~~~ 233 (248)
T 3u2s_H 221 VNHKPSNTKVDKK 233 (248)
T ss_dssp EEEGGGTEEEEEE
T ss_pred EEECCCCcceEEE
Confidence 9998765544433
No 302
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.67 E-value=1.2e-17 Score=123.01 Aligned_cols=154 Identities=16% Similarity=0.274 Sum_probs=84.1
Q ss_pred cCCCeEEEEEEecc---------eeeeecccCcceecc---ccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccE
Q psy3045 28 PGGESFALLCEAQE---------NMWFKFIEGSSRKVA---VPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGES 95 (267)
Q Consensus 28 ~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 95 (267)
.+|+++.|.|.+.+ +.|++++........ .............|.|......|+|.|+|.+.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 79999999999743 789996432111000 001111111122344444444559999999999877542
Q ss_pred EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC-ceEEEEECCc
Q psy3045 96 VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTISWMKDGK 173 (267)
Q Consensus 96 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~ 173 (267)
....+.+. ......+.... ..+.. ....|+.+.|.|.+.|. |. +.+.|+++|.
T Consensus 96 ~~~~v~~~--~~~~~~P~v~~----------------------~~~~~-~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~ 150 (207)
T 1l6x_A 96 IEKTISKA--KGQPREPQVYT----------------------LPPSR-DELTKNQVSLTCLVKGFYPSDIAVEWESNGQ 150 (207)
T ss_dssp EEEEECCC--CSCCBCCEEEE----------------------ECCCG-GGGGSSEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred eEEEeccC--CCCCcCCEEEE----------------------ECCCh-HHhcCCcEEEEEEEeCeECCCeEEEEEECCe
Confidence 22222110 01111111110 00000 11235669999999985 54 4999999998
Q ss_pred cCCCC--------CCCe------EEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 174 PVPDH--------NEPV------FRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 174 ~~~~~--------~~~~------l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+... .... |.+.....+|.|.|+|.|.|....
T Consensus 151 ~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 151 PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 76421 1222 333333445789999999998643
No 303
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.66 E-value=6.5e-16 Score=115.18 Aligned_cols=113 Identities=20% Similarity=0.358 Sum_probs=82.6
Q ss_pred EEEecCCCEEEEeEeCCCCCc---eEEEEECCccCC-----------C------------------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVK---TISWMKDGKPVP-----------D------------------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~---~~~W~~~~~~~~-----------~------------------~~~~~l~i~~~~~~ 191 (267)
..+.+|+++.|.|.+.+.+.+ .+.|+|++.... . .....|.|.+++.+
T Consensus 14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 367889999999998765533 799999764321 0 01347999999999
Q ss_pred CCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCCcEEEEECCEE
Q psy3045 192 DKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTPEISWYLDGKK 261 (267)
Q Consensus 192 d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~ 261 (267)
|+|.|+|.|.|..+.......+.+. +..........+.+|..+.|.|.+.| .|.|.|.|++++..
T Consensus 94 D~G~Y~C~a~n~~~~~~~~v~~~~~-----~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~ 159 (226)
T 4f80_A 94 DSGKYLCYFQDGDFYEKALVELKVA-----ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGE 159 (226)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE-----BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSC
T ss_pred HCeeEEEEEECCCcEEEEEEEEeec-----cceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCce
Confidence 9999999999987765555444443 12222233456788999999999987 59999999996543
No 304
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.66 E-value=8.1e-16 Score=115.02 Aligned_cols=165 Identities=18% Similarity=0.286 Sum_probs=102.9
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc-------------ccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA-------------VPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 4678999999999999853 999985433221111 1123455432 2359999999
Q ss_pred cCCCeeEEEEEEcCCC-----cc---EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEec
Q psy3045 77 VEDSGKYLCVVNNSVG-----GE---SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF 148 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~-----~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+|+|.|+|.+.+..+ .. ...+.|.|...+ ...+.... . .....+..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~v~~----------------------~-~~~~~~~~ 142 (230)
T 3n9g_H 88 SEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS--TKGPSVFP----------------------L-APSSKSTS 142 (230)
T ss_dssp GGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC--CBCCEEEE----------------------E-CCCCCCCT
T ss_pred hhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC--CCCCEEEe----------------------c-CCCccccC
Confidence 9999999999987531 11 122345554211 11111110 0 11113457
Q ss_pred CCCEEEEeEeCCC-C-CceEEEEECCccCCCC----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 149 GRPAQFTCKYEGN-P-VKTISWMKDGKPVPDH----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 149 g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~~~----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
|+.+.|.|.+.+. | .+.+.| ++..+... + .+.|.|.....+| |.|+|.|.|..+......
T Consensus 143 g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 219 (230)
T 3n9g_H 143 GGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 219 (230)
T ss_dssp TCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEE
T ss_pred CCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEE
Confidence 8999999999875 4 457999 66554321 1 1368888888888 999999999876555444
Q ss_pred EEEE
Q psy3045 212 ELKL 215 (267)
Q Consensus 212 ~l~v 215 (267)
.+.+
T Consensus 220 ~~~v 223 (230)
T 3n9g_H 220 RVEP 223 (230)
T ss_dssp ECCC
T ss_pred EccC
Confidence 4443
No 305
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=1.7e-16 Score=117.14 Aligned_cols=125 Identities=15% Similarity=0.357 Sum_probs=89.3
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC--------------CC-------CCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV--------------PD-------HNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~--------------~~-------~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+.++|.|.+.+.|.+.+.|++++ ..+ .. .....|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 44558889999999999888877789999853 222 00 12247999999999999999
Q ss_pred EEEEcCCCCc---eEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecC-CC-CcEEEEECCEEcCCC
Q psy3045 198 CVIRNEQESA---QASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVNA 265 (267)
Q Consensus 198 C~~~~~~~~~---~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~l~~~ 265 (267)
|.+.|..... .....+.|... ..+|.+...+....+.+|+.+.|.|.+.|. |+ +.|.|+++|+.+..+
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 9999732211 11234555322 256777665544445679999999999987 54 799999999988643
No 306
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.66 E-value=4.8e-16 Score=117.89 Aligned_cols=125 Identities=20% Similarity=0.361 Sum_probs=89.7
Q ss_pred CceEEEecCCCEEEEeEeCCCC-----CceEEEEECCc--cC--------------CC-------CCCCeEEeccCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP-----VKTISWMKDGK--PV--------------PD-------HNEPVFRIDSVRKED 192 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p-----~~~~~W~~~~~--~~--------------~~-------~~~~~l~i~~~~~~d 192 (267)
+....+.+|++++|.|.+.+.+ .+.+.|++++. .+ .. .....|.|.+++.+|
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 120 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAED 120 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCccc
Confidence 4455789999999999998887 58999999642 11 00 112379999999999
Q ss_pred CeEEEEEEEcCCCCc-eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcCCC
Q psy3045 193 KGMYQCVIRNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVNA 265 (267)
Q Consensus 193 ~g~y~C~~~~~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~~~ 265 (267)
+|.|.|.+.+..+.. .....+.|.....+|.+...+....+.+|+.+.|.|.+.|. |++ .|.|+++|+.+..+
T Consensus 121 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 196 (252)
T 3bkj_L 121 LGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 196 (252)
T ss_dssp CEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred CEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCC
Confidence 999999999875432 12235666543346776654433334578999999999984 444 79999999987643
No 307
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.66 E-value=2.7e-16 Score=101.49 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=68.2
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~ 82 (267)
.||.|...+ .++.+.+|+++.|.|.+.+ +.|++++..... ....++.. ...+|.|.+++.+|+|.
T Consensus 4 ~PP~i~~~p--~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~----~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 77 (100)
T 3knb_A 4 IPPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHS----QEQGRFHIENTDDLTTLIIMDVQKQDGGL 77 (100)
T ss_dssp EEEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCT----TGGGTEEEEECSSEEEEEESSCCGGGCEE
T ss_pred CCCEEEeCC--CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeee----eccceeeeecccceEEEEEcCCCccCCEE
Confidence 478998877 7899999999999999998 999996432211 11122222 23579999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEe
Q psy3045 83 YLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
|+|.|.|..|..+..+.|.|..
T Consensus 78 Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 78 YTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEEEEEE
Confidence 9999999999988888888763
No 308
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.66 E-value=2.4e-15 Score=110.97 Aligned_cols=121 Identities=18% Similarity=0.341 Sum_probs=89.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCc---eEEEEECCccCCC------------------------------CCCCeEEecc
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVK---TISWMKDGKPVPD------------------------------HNEPVFRIDS 187 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~---~~~W~~~~~~~~~------------------------------~~~~~l~i~~ 187 (267)
+....+..|+++.|.|.+.+.|.+ .+.|+|++..+.. ....+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 345588899999999999887754 5899998765421 1235699999
Q ss_pred CCCCCCeEEEEEEEcCCCCceEE-EEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 188 VRKEDKGMYQCVIRNEQESAQAS-GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 188 ~~~~d~g~y~C~~~~~~~~~~~~-~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
++.+|+|.|.|.+.+..+..... ..+.+. ..++..........+..|..+.|.|.+.|.|+|.|.|+++|..+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~ 160 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVL--VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTT 160 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEE--BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEe--eeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccc
Confidence 99999999999998866544433 233332 233333334445567789999999999999999999999987664
No 309
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.65 E-value=5.1e-16 Score=111.97 Aligned_cols=108 Identities=18% Similarity=0.272 Sum_probs=83.9
Q ss_pred EEEecCCCEEEEeEeCCCCCceEEEEECCcc--CC------------------------CCCCCeEEeccCCCCCCeEEE
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKP--VP------------------------DHNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~--~~------------------------~~~~~~l~i~~~~~~d~g~y~ 197 (267)
..+.+|+++.|.|.+.+.|.+.+.|++++.. +. ......|.|.+++.+|+|.|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 3788999999999999888899999998753 10 112455999999999999999
Q ss_pred EEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 198 CVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 198 C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
|.+.+..+ ...+.|.. +.. +....+.+|+.+.|.|.+.+.|.|.+.|+++|..+
T Consensus 85 C~~~~~~~----~~~l~V~~------~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~ 138 (184)
T 2ny1_B 85 CEVEDQKE----EVQLLVFG------LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN 138 (184)
T ss_dssp EEETTEEE----EEEEEEEE------EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE
T ss_pred EEEEcCCC----cEEEEEEE------ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc
Confidence 99988643 34444431 112 23347889999999999999999999999998653
No 310
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.65 E-value=1.2e-14 Score=107.33 Aligned_cols=194 Identities=20% Similarity=0.280 Sum_probs=125.5
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCc
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGG 93 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 93 (267)
....+..|+.++|.|.+.+ ++|+|++.. +......|.+..+...|+|.|+|.+.+..|.
T Consensus 10 ~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~------------IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gc 77 (304)
T 3shs_A 10 NKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQP------------HENNTATLTVADATSENAGSYKVTVQDTDTM 77 (304)
T ss_dssp SCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEE------------CSCCSSEEEESSCCGGGCEEEEEEEEETTTC
T ss_pred CCccccCCCCEEEEEEecCCCCCCCCceEEEEECCcc------------ccCCcceEEeeeccccCCeEEEEEEEECCCC
Confidence 5567889999999999754 999996321 1112347889999999999999999998776
Q ss_pred cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe--CC-CC-----Cce
Q psy3045 94 ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY--EG-NP-----VKT 165 (267)
Q Consensus 94 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~--~~-~p-----~~~ 165 (267)
......+.|.....+. ..+ ..+....+..|..+.|.+.+ .| .+ ...
T Consensus 78 s~tSs~VtVT~~a~l~-----i~i---------------------t~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yT 131 (304)
T 3shs_A 78 TSVESEVFLMEEAELI-----VNI---------------------TEPQHFYVSSQTDVELHATVKFSGGKTPADNYELH 131 (304)
T ss_dssp CEEECCCEEECBCCEE-----EEE---------------------SSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCE
T ss_pred eeeeeeEEEeccCcee-----EEe---------------------cCCCceeccCCCeEEEEEEEeccCCCCcccCCCce
Confidence 5444444444322110 000 01222244557788888877 54 33 469
Q ss_pred EEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe
Q psy3045 166 ISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA 245 (267)
Q Consensus 166 ~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~ 245 (267)
+.|++|+..+. ....+++......++|.|+|++.+..+....+....+.... .+.-........+..|+.+.|...+
T Consensus 132 YQWyKngt~Is--gAq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~ 208 (304)
T 3shs_A 132 YSWSKGEDVID--TTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT-MNVDQDVVESKTVALGNEISLNYVV 208 (304)
T ss_dssp EEEEETTEEEE--SSSEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECE-EEEEECCCSEEEEETTSCEEECCEE
T ss_pred eEEeeCCeEcc--CccccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEc-cccchhheEeehhhcCcEEEEEEEE
Confidence 99999998874 34578888888899999999999987644444444333211 1111112234467889999887654
Q ss_pred e--------cCCCC--cEEEEE
Q psy3045 246 S--------GNPTP--EISWYL 257 (267)
Q Consensus 246 ~--------~~p~~--~i~W~~ 257 (267)
. |.|.. ++-||.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3shs_A 209 SEDIVGDSSGMPNLTIKYNWYL 230 (304)
T ss_dssp EEECCSCCTTCCEEEEEEEEEE
T ss_pred eeccccCCCCCCceEEEEEEEE
Confidence 2 34433 678883
No 311
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.65 E-value=5.9e-17 Score=120.21 Aligned_cols=119 Identities=15% Similarity=0.249 Sum_probs=85.5
Q ss_pred EecCCCEEEEeEeCCC---C-CceEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 146 IDFGRPAQFTCKYEGN---P-VKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~---p-~~~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+.+|+++.|.|.+.+. | .+.+.|++++..+... ....|.|..+..+|+|.|+|.+.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 6789999999999876 3 3799999998765432 12368888889999999999999987654
Q ss_pred eEEEEEEE-ecccCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCC
Q psy3045 208 QASGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 208 ~~~~~l~v-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~ 264 (267)
.....+.. .....+|.+...+......+|+.+.|.|.+.| .|++ .|.|+++|..+..
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 162 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEEN 162 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccC
Confidence 22222211 11235676655443322235999999999998 5665 9999999998743
No 312
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.65 E-value=5.7e-17 Score=119.29 Aligned_cols=119 Identities=15% Similarity=0.233 Sum_probs=85.4
Q ss_pred EecCCCEEEEeEeCCCC----CceEEEEECCccCCCC---------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 146 IDFGRPAQFTCKYEGNP----VKTISWMKDGKPVPDH---------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~p----~~~~~W~~~~~~~~~~---------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+.+|+++.|.|.+.+.+ ...+.|++++..+... . ...|.|.+++.+|+|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999998774 3499999998765421 0 1368888889999999999999987754
Q ss_pred eEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcCC
Q psy3045 208 QASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 264 (267)
Q Consensus 208 ~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~~ 264 (267)
.....+.+. ....+|.+...+.......|+.+.|.|.+.|. |++ .+.|++||+.+..
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 154 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAEN 154 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSC
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccC
Confidence 333333220 12356776554433223368999999999985 443 8999999998754
No 313
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.65 E-value=2e-16 Score=119.01 Aligned_cols=165 Identities=16% Similarity=0.227 Sum_probs=100.0
Q ss_pred eeEEecCCCeEEEEEEecc---------eeeeecccCcceecc------------------ccCCceEEEE------eeE
Q psy3045 23 IRFKKPGGESFALLCEAQE---------NMWFKFIEGSSRKVA------------------VPLNDRVKQV------SGT 69 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~------------------~~~~~~~~~~------~~~ 69 (267)
..+.+.+|++|+|.|.+.+ +.|++...+...... .....|+... ..+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 87 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVF 87 (239)
T ss_dssp SCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEE
T ss_pred CCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEE
Confidence 4678999999999999853 899986433221110 1123455432 246
Q ss_pred EEEeecccCCCeeEEEEEEcCCCc-------------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcc
Q psy3045 70 LIIKEAKVEDSGKYLCVVNNSVGG-------------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLA 136 (267)
Q Consensus 70 l~i~~~~~~d~G~Y~C~~~~~~~~-------------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 136 (267)
|.|.+++.+|+|.|+|.+.+..+. ......|.|... ....+...
T Consensus 88 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~--~~~~P~v~--------------------- 144 (239)
T 3tv3_H 88 LKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSA--STKGPSVF--------------------- 144 (239)
T ss_dssp EEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCC--CCBCCEEE---------------------
T ss_pred EEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccC--CCcCCEEE---------------------
Confidence 999999999999999999764310 011123444321 01111111
Q ss_pred cccCCceEEEecCCCEEEEeEeCCC-CC-ceEEEEECCccCC--------CCC-----CCeEEeccCCCCCCeEEEEEEE
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTISWMKDGKPVP--------DHN-----EPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~~~--------~~~-----~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
..+....+..|+.+.|.|.+.+. |. ..+.|++++..+. ..+ .+.|.|.....+| |.|+|.|.
T Consensus 145 --~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 221 (239)
T 3tv3_H 145 --PLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 221 (239)
T ss_dssp --EECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEE
T ss_pred --EECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEE
Confidence 00111134468999999999874 53 3689999886432 111 1357787777788 99999999
Q ss_pred cCCCCceEEEEE
Q psy3045 202 NEQESAQASGEL 213 (267)
Q Consensus 202 ~~~~~~~~~~~l 213 (267)
|..+.......+
T Consensus 222 h~~~~~~~~~~l 233 (239)
T 3tv3_H 222 HKPSNTKVDKRV 233 (239)
T ss_dssp EGGGTEEEEEEC
T ss_pred ECCCCceEEEEe
Confidence 987654444333
No 314
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.65 E-value=5.6e-16 Score=117.02 Aligned_cols=124 Identities=19% Similarity=0.363 Sum_probs=88.9
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEE----------------CCccCCC-------------CCCCeEEeccCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMK----------------DGKPVPD-------------HNEPVFRIDSVRKE 191 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~----------------~~~~~~~-------------~~~~~l~i~~~~~~ 191 (267)
+....+.+|+++.|.|.+.+.+.+.+.|+| ++..... .....|.|.+++.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 87 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 87 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGG
T ss_pred CcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHH
Confidence 445588899999999999998889999998 2221111 12347999999999
Q ss_pred CCeEEEEEEEcCCC----CceEEEEEEEec---ccCCCeeec-CCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEE
Q psy3045 192 DKGMYQCVIRNEQE----SAQASGELKLGG---RFDPPVIKE-SFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKK 261 (267)
Q Consensus 192 d~g~y~C~~~~~~~----~~~~~~~l~v~~---~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~ 261 (267)
|+|.|.|.+.+..+ .......+.|.. ...+|.+.. .+....+.+|+.+.|.|.+.|.|++ .+.|+++|+.
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 167 (246)
T 4dzb_B 88 DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 167 (246)
T ss_dssp GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEE
Confidence 99999999987542 111233455543 223555543 3344456679999999999987665 8999999998
Q ss_pred cCC
Q psy3045 262 LVN 264 (267)
Q Consensus 262 l~~ 264 (267)
|..
T Consensus 168 l~~ 170 (246)
T 4dzb_B 168 VHS 170 (246)
T ss_dssp ECT
T ss_pred CCC
Confidence 865
No 315
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.3e-15 Score=115.10 Aligned_cols=118 Identities=18% Similarity=0.385 Sum_probs=86.6
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECCc--cC-------------------C---------CCCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDGK--PV-------------------P---------DHNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~~--~~-------------------~---------~~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+.| .+.+.|+++.. .+ . .....+|.|.+++.+
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 91 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence 4788999999999999887 67899998431 10 0 011246999999999
Q ss_pred CCeEEEEEEEcCCCC--ceEEEEEEEecc------------cCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEE
Q psy3045 192 DKGMYQCVIRNEQES--AQASGELKLGGR------------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL 257 (267)
Q Consensus 192 d~g~y~C~~~~~~~~--~~~~~~l~v~~~------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~ 257 (267)
|+|.|.|.+.+..+. ......|.|... ..++.+...+....+.+|+.+.|.|.+.+.|.+.+.|||
T Consensus 92 D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 171 (247)
T 2ghw_B 92 DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQ 171 (247)
T ss_dssp GCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEE
T ss_pred HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEE
Confidence 999999999987321 112335566532 124555556667788999999999999999999999999
Q ss_pred --CCEE
Q psy3045 258 --DGKK 261 (267)
Q Consensus 258 --~~~~ 261 (267)
+|..
T Consensus 172 ~~~g~~ 177 (247)
T 2ghw_B 172 QKPGQA 177 (247)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 5553
No 316
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.65 E-value=6.1e-16 Score=110.16 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=82.9
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCC-------------------CCCCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP-------------------DHNEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~-------------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
.+..|++++|.|.+.+ |.+.+.|++++..+. ...+.+|.|.+++.+|+|.|.|.+.+..+
T Consensus 6 ~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~ 84 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD 84 (171)
T ss_dssp EEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS
T ss_pred EEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC
Confidence 6788999999999844 788999999875321 01347899999999999999999998776
Q ss_pred CceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEcC
Q psy3045 206 SAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 206 ~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l~ 263 (267)
...+.|.|......|.+..... ...|.|.+.+.|.|.+.|+++|..+.
T Consensus 85 --~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~ 132 (171)
T 1ccz_A 85 --TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLR 132 (171)
T ss_dssp --CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEE
T ss_pred --cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECc
Confidence 5666777765434455443221 13799999999999999999998875
No 317
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.64 E-value=6.8e-16 Score=100.83 Aligned_cols=79 Identities=23% Similarity=0.375 Sum_probs=68.1
Q ss_pred ccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 138 GVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 138 ~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
...+....+.+|+.+.|.|.+.|.|.+.+.|++|+..+..+. ...|.|.++..+|+|.|+|.|.|..|...
T Consensus 17 ~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 96 (107)
T 3knb_B 17 LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAY 96 (107)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEE
Confidence 344556689999999999999999999999999999886542 24799999999999999999999999888
Q ss_pred EEEEEEEe
Q psy3045 209 ASGELKLG 216 (267)
Q Consensus 209 ~~~~l~v~ 216 (267)
.++.|.|.
T Consensus 97 ~~~~l~V~ 104 (107)
T 3knb_B 97 AAAAVTVL 104 (107)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888876
No 318
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.64 E-value=2.3e-15 Score=108.09 Aligned_cols=111 Identities=22% Similarity=0.386 Sum_probs=84.1
Q ss_pred EEEecCCCEEEEeEeC--CCCCceEEEEE--CCccCC----------C------CCCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 144 QTIDFGRPAQFTCKYE--GNPVKTISWMK--DGKPVP----------D------HNEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~--~~p~~~~~W~~--~~~~~~----------~------~~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
.....|+++.|.|... +.+.+.|.|++ ++..+. . ..+.+|.|.+++.+|+|.|+|.+.|.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~ 88 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDT 88 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEET
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeC
Confidence 4778899999999543 34567999999 876651 1 13468999999999999999999998
Q ss_pred CCCceE--EEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEEEEECCEEc
Q psy3045 204 QESAQA--SGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262 (267)
Q Consensus 204 ~~~~~~--~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~l 262 (267)
.+.... .+.|.|.....+|.+.. .+..+.|.|.+.+.|.+.|.|+++|+.+
T Consensus 89 ~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 89 KGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp TSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred CCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 776543 45566654334454433 2347899999999999999999999876
No 319
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=3e-15 Score=112.56 Aligned_cols=118 Identities=22% Similarity=0.417 Sum_probs=86.6
Q ss_pred CceEEEecCCCEEEEeEeCCCC----CceEEEEECC--ccCC----------C-----------CCCCeEEeccCCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP----VKTISWMKDG--KPVP----------D-----------HNEPVFRIDSVRKEDK 193 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p----~~~~~W~~~~--~~~~----------~-----------~~~~~l~i~~~~~~d~ 193 (267)
+....+.+|+.+.|.|.+.+.| .+.+.|++++ ..+. . .....|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV 87 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC
Confidence 4455889999999999999988 7899999963 2110 0 1123799999999999
Q ss_pred eEEEEEEEcCCCC-ceEEEEEEEecccC---CCeeecCCceeEEecCCcEEEEEEeecCCC--CcEEEEEC
Q psy3045 194 GMYQCVIRNEQES-AQASGELKLGGRFD---PPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLD 258 (267)
Q Consensus 194 g~y~C~~~~~~~~-~~~~~~l~v~~~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~ 258 (267)
|.|.|.+.+..+. ......+.|..... ++.+...+....+.+|+.+.|.|.+.+.|. +.+.|+|+
T Consensus 88 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 88 ATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 9999999987543 23345566654221 223334455667899999999999999874 59999995
No 320
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.63 E-value=9.1e-16 Score=99.01 Aligned_cols=78 Identities=24% Similarity=0.496 Sum_probs=67.2
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
..+....+.+|+.+.|.|.+.|.|.|.+.|++|+..+... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 10 ~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 10 ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred eCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 3455668999999999999999999999999999888643 22479999999999999999999999988
Q ss_pred eEEEEEEEe
Q psy3045 208 QASGELKLG 216 (267)
Q Consensus 208 ~~~~~l~v~ 216 (267)
..++.|.|+
T Consensus 90 ~~~~~l~V~ 98 (100)
T 3knb_A 90 SATVNIHIR 98 (100)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 888888775
No 321
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.63 E-value=8.9e-16 Score=100.28 Aligned_cols=87 Identities=22% Similarity=0.331 Sum_probs=69.4
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G 81 (267)
..||.|...+ .++.+.+|+++.|.|.+.+ +.|++++... ....++.. ...+|.|.+++.+|+|
T Consensus 11 ~~pP~f~~~p--~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l------~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (107)
T 3knb_B 11 GSPPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQL------AASERLSFPADGAEHGLLLTAALPTDAG 82 (107)
T ss_dssp CEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEEC------CCCSSEECCEETTEEEEEESSCCGGGCE
T ss_pred CCCCEEEeCC--CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccc------cceeeEEEeecCceEEEEEecCChhhCE
Confidence 3479999888 7899999999999999998 9999964321 12223221 2357999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEec
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
.|+|.|.|..|.....+.|.|..+
T Consensus 83 ~Y~C~a~N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 83 VYVCRARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC-
T ss_pred EEEEEEEECCCEEEEEEEEEEEcC
Confidence 999999999999888888888764
No 322
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.63 E-value=2.9e-15 Score=113.80 Aligned_cols=163 Identities=18% Similarity=0.280 Sum_probs=98.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|+|.+++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 3567999999999999853 99998533321111 11233455432 2359999999
Q ss_pred cCCCeeEEEEEEcCCC---------c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEE
Q psy3045 77 VEDSGKYLCVVNNSVG---------G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQT 145 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~---------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 145 (267)
.+|+|.|+|.+.+..+ . ....+.|.|...+ ...+... .. .....
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~----------------------~~-~~~~~ 165 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS--TKGPSVF----------------------PL-APSSK 165 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC--CBCCEEE----------------------EE-CCC--
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC--CCCCEEE----------------------EE-CCCcc
Confidence 9999999999986431 1 1122345554211 1111111 00 11113
Q ss_pred EecCCCEEEEeEeCCC-C-CceEEEEECCccCCCC----------C-----CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 146 IDFGRPAQFTCKYEGN-P-VKTISWMKDGKPVPDH----------N-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~~~----------~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
+.+|+.++|.|.+.+. | +..+.| ++..+... + .+.|.|.....+| |.|+|.+.|......
T Consensus 166 ~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~ 242 (256)
T 3sob_H 166 STSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 242 (256)
T ss_dssp ---TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred cccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcc
Confidence 4579999999998874 4 458999 55544321 1 1367788888888 999999999876554
Q ss_pred EEEEE
Q psy3045 209 ASGEL 213 (267)
Q Consensus 209 ~~~~l 213 (267)
....+
T Consensus 243 ~~~~~ 247 (256)
T 3sob_H 243 VDKKV 247 (256)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 44443
No 323
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.63 E-value=1.3e-16 Score=119.52 Aligned_cols=125 Identities=16% Similarity=0.323 Sum_probs=71.1
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--cC-----------C--CC--------CCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--PV-----------P--DH--------NEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~~-----------~--~~--------~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|+++.|.|.+.+.+.+.+.|++++. .+ . .. ....|.|.+++.+|+|.|.
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 109 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYY 109 (233)
T ss_dssp CSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEE
T ss_pred CCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEE
Confidence 344478889999999999888777899998542 11 0 00 1126999999999999999
Q ss_pred EEEEcCCCCc-eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCC-C-cEEEEECCEEcCCC
Q psy3045 198 CVIRNEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT-P-EISWYLDGKKLVNA 265 (267)
Q Consensus 198 C~~~~~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~-~i~W~~~~~~l~~~ 265 (267)
|.+.+..+.. .....+.|.....+|.+...+......+|+.+.|.|.+.|.++ + .+.|+++|+.+..+
T Consensus 110 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 110 CLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp EEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred EEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 9998865432 1123455543334677666443333457999999999998544 3 79999999887543
No 324
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.63 E-value=5.4e-15 Score=111.02 Aligned_cols=116 Identities=14% Similarity=0.318 Sum_probs=84.3
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--c-----------------cCC--------CCCCCeEEeccCCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--K-----------------PVP--------DHNEPVFRIDSVRKEDK 193 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~-----------------~~~--------~~~~~~l~i~~~~~~d~ 193 (267)
+....+.+|++++|.|. .+.|.+.+.|+++. . .+. ......|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 85 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQT 85 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred ccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccC
Confidence 44558899999999999 67788999999951 1 011 11245799999999999
Q ss_pred eEEEEEEEcCCCCc-----eEEEEEEEecccCCC-----------eeecCCceeEEecCCcEEEEEEeecCCCCcEEEEE
Q psy3045 194 GMYQCVIRNEQESA-----QASGELKLGGRFDPP-----------VIKESFSDETLNPGPNYYFKCIASGNPTPEISWYL 257 (267)
Q Consensus 194 g~y~C~~~~~~~~~-----~~~~~l~v~~~~~~p-----------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~ 257 (267)
|.|.|.+.+..+.. .....+.|.. .++ .+...+....+.+|+.+.|.|.+.+.|.+.+.|||
T Consensus 86 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~--~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k 163 (238)
T 2p1y_A 86 SVYFCASGDLGQTNERLFFGHGTKLSVLG--SADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQ 163 (238)
T ss_dssp EEEEEEEEC------CEEECCCEEEEEEC--CCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEE
T ss_pred eeEEEEEEeCCCccccceeCCCeEEEEec--cCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEE
Confidence 99999999875421 1123455543 222 55555667789999999999999999999999999
Q ss_pred CC
Q psy3045 258 DG 259 (267)
Q Consensus 258 ~~ 259 (267)
++
T Consensus 164 ~~ 165 (238)
T 2p1y_A 164 QF 165 (238)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 325
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.63 E-value=4.9e-15 Score=109.33 Aligned_cols=119 Identities=21% Similarity=0.342 Sum_probs=86.3
Q ss_pred CceEEEecCCCEEEEeEeCCC-------CCceEEEEECCcc------CC---------C-------------CCCCeEEe
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN-------PVKTISWMKDGKP------VP---------D-------------HNEPVFRI 185 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~-------p~~~~~W~~~~~~------~~---------~-------------~~~~~l~i 185 (267)
+....+.+|+.+.|.|.+.+. +.+.+.|++++.. +. . ....+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 445588899999999998754 5679999997642 10 0 11347999
Q ss_pred ccCCCCCCeEEEEEEEcCCCCc----eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecC----CCCcEEEEE
Q psy3045 186 DSVRKEDKGMYQCVIRNEQESA----QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGN----PTPEISWYL 257 (267)
Q Consensus 186 ~~~~~~d~g~y~C~~~~~~~~~----~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~i~W~~ 257 (267)
.+++.+|+|.|.|.+.+..+.. .....|.|.....+|.+.... .+.+|+.+.|.|.+.+. |.|.+.|++
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~---~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~ 163 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE---PLESGRPTRLSCSLPGSCEAGPPLTFSWTG 163 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C---CCCTTCCEEEEEECTTCCSCSSCCEEEEES
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc---cccCCCeEEEEEEeccCCCCCCCceEEEeC
Confidence 9999999999999999875221 124566666544456665422 36789999999999874 788999999
Q ss_pred CCEEc
Q psy3045 258 DGKKL 262 (267)
Q Consensus 258 ~~~~l 262 (267)
+|..+
T Consensus 164 ~~~~~ 168 (214)
T 2zg1_A 164 NALSP 168 (214)
T ss_dssp STTSS
T ss_pred CCCcc
Confidence 98654
No 326
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.62 E-value=4e-15 Score=123.05 Aligned_cols=155 Identities=15% Similarity=0.261 Sum_probs=96.7
Q ss_pred EecCCCeEEEEEEecc--------eeeeecccCccee--ccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccE
Q psy3045 26 KKPGGESFALLCEAQE--------NMWFKFIEGSSRK--VAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGES 95 (267)
Q Consensus 26 ~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 95 (267)
.+.+|+++.|.|.+.+ +.| ++....... .............+.|.|.++..+|+|.|+|.+.|..+...
T Consensus 258 ~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 258 DLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred HhccCCceEEEEEEEcccCCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc
Confidence 3689999999999865 789 432111000 00001111122456799999999999999999999887754
Q ss_pred EEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-C-CceEEEEECCc
Q psy3045 96 VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-P-VKTISWMKDGK 173 (267)
Q Consensus 96 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~ 173 (267)
....+.+.. ....+... ...+....+..|+.+.|.|.+.+. | .+.+.|+++|.
T Consensus 337 ~~~~v~~~~---~~~~P~v~----------------------~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~ 391 (475)
T 1iga_A 337 LTATLSKSG---NTFRPEVH----------------------LLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQ 391 (475)
T ss_pred eEEEeecCC---CCCCCeEE----------------------EECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCE
Confidence 433333211 00111111 001111135678999999999986 4 35999999998
Q ss_pred cCCCC-------------CC------CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 174 PVPDH-------------NE------PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 174 ~~~~~-------------~~------~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+... .. +.|.+.....+|.|.|+|.|.|....
T Consensus 392 ~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 392 ELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred ECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 76432 11 23556666677899999999998644
No 327
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=121.68 Aligned_cols=154 Identities=14% Similarity=0.186 Sum_probs=95.6
Q ss_pred ecCCCeEEEEEEecc---------eeeeecccCcceec---cccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCcc
Q psy3045 27 KPGGESFALLCEAQE---------NMWFKFIEGSSRKV---AVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGE 94 (267)
Q Consensus 27 v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (267)
+..|++++|.|.+.+ +.|++++....... ..............|.|..+..+|+|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 789999999999865 67999752211110 111122223345579999999999999999999876643
Q ss_pred EEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-C-CceEEEEECC
Q psy3045 95 SVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-P-VKTISWMKDG 172 (267)
Q Consensus 95 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~ 172 (267)
.....+.+. ......+... ..+.......|+.++|.|.+.++ | .+.|.|++||
T Consensus 260 ~~~~~v~~~--~~~~~~P~v~-----------------------v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g 314 (376)
T 2aty_A 260 PIEKTISKT--KGRPKAPQLY-----------------------TIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNG 314 (376)
T ss_pred ceEEEEcCC--CCCCcCCeEE-----------------------eeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECC
Confidence 322222110 0101111111 00111123348899999999986 3 5699999999
Q ss_pred ccCCCC--------CC------CeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 173 KPVPDH--------NE------PVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 173 ~~~~~~--------~~------~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
..+... .. +.|.+.....+|.|.|+|.|.|...
T Consensus 315 ~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 315 QPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 876421 11 2356666666778999999999764
No 328
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.62 E-value=6.1e-16 Score=117.93 Aligned_cols=158 Identities=18% Similarity=0.294 Sum_probs=93.9
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec------------cccCCceEEEE------eeEEEEeeccc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV------------AVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~------------~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 3578999999999999853 99998543322111 11223455532 23599999999
Q ss_pred CCCeeEEEEEEcCCCc--------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecC
Q psy3045 78 EDSGKYLCVVNNSVGG--------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFG 149 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~--------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g 149 (267)
+|+|.|+|.+.+..+. ....+.|.|.... ...+.... ..+ ...+..|
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~--~~~P~v~~----------------------~~~-~~~~~~g 142 (263)
T 3iu4_H 88 DDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS--TKGPSVFP----------------------LAP-SSKGSTS 142 (263)
T ss_dssp GGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC--CBCCEEEE----------------------ECC-CCCC---
T ss_pred HHCEEEEEEEEeCCCCccccccceeCCceEEEEeccc--CCCCEEEE----------------------ccC-ccccccC
Confidence 9999999999875310 1122344553211 11111110 001 1123468
Q ss_pred CCEEEEeEeCCC-C-CceEEEEECCccCCC----------CC-----CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 150 RPAQFTCKYEGN-P-VKTISWMKDGKPVPD----------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 150 ~~v~l~C~~~~~-p-~~~~~W~~~~~~~~~----------~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
+.++|.|.+.+. | .+.+.| ++..+.. .+ .+.|.|.....+| |.|+|.|.|......
T Consensus 143 ~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 215 (263)
T 3iu4_H 143 GTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 215 (263)
T ss_dssp -EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEE
T ss_pred CcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcc
Confidence 999999999875 4 368999 5544321 11 1357777777778 999999999876543
No 329
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.62 E-value=2.7e-15 Score=114.75 Aligned_cols=126 Identities=17% Similarity=0.377 Sum_probs=88.2
Q ss_pred ccCCceEEEecCCCEEEEeEeCCCCCceEEEEEC--CccC------------------------C--CCCCCeEEeccCC
Q psy3045 138 GVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKD--GKPV------------------------P--DHNEPVFRIDSVR 189 (267)
Q Consensus 138 ~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--~~~~------------------------~--~~~~~~l~i~~~~ 189 (267)
...+....+.+|++++|.|.+. .+.+.+.|+|. +... . ......|.|.+++
T Consensus 30 ~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (268)
T 3pl6_D 30 SQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTE 108 (268)
T ss_dssp BCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCC
T ss_pred EeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCC
Confidence 3445566889999999999976 56789999982 2111 0 1124579999999
Q ss_pred CCCCeEEEEEEEcC--CCCceEEEEEEEec---ccCCCeeec-CCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEE
Q psy3045 190 KEDKGMYQCVIRNE--QESAQASGELKLGG---RFDPPVIKE-SFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKK 261 (267)
Q Consensus 190 ~~d~g~y~C~~~~~--~~~~~~~~~l~v~~---~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~ 261 (267)
.+|+|.|.|.+.+. .........+.|.. ...+|.+.. .+....+.+|+.+.|.|.+.|.+++ .+.|+++|+.
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~ 188 (268)
T 3pl6_D 109 RGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 188 (268)
T ss_dssp GGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSE
T ss_pred cccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEE
Confidence 99999999999974 22222234455553 223565443 3444455669999999999986654 8999999998
Q ss_pred cCC
Q psy3045 262 LVN 264 (267)
Q Consensus 262 l~~ 264 (267)
+..
T Consensus 189 l~~ 191 (268)
T 3pl6_D 189 VHS 191 (268)
T ss_dssp ECT
T ss_pred CCC
Confidence 854
No 330
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.61 E-value=2e-15 Score=110.68 Aligned_cols=109 Identities=22% Similarity=0.375 Sum_probs=77.5
Q ss_pred EecCCCEEEEeEeCCCCCceEEEEECCccCCC--CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEec------
Q psy3045 146 IDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD--HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGG------ 217 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~------ 217 (267)
+.+|+++.|.|.+ |.+.+.|+|+|..+.. .....|.|..++.+|+|.|+|.+.+... . .+.+.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s-~--~~~v~v~~~~~~~~ 88 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKS-K--PLQVYYRMGSADDA 88 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCC-C--CEEEEEEC------
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCC-e--eEEEEEEEeccccc
Confidence 4579999999998 7789999999988753 3567899999999999999999755322 1 23333320
Q ss_pred ----------------------ccCCCeeecCCceeEEe-cCCcEEEEEEeecCCCCcEEEEECCEEcCC
Q psy3045 218 ----------------------RFDPPVIKESFSDETLN-PGPNYYFKCIASGNPTPEISWYLDGKKLVN 264 (267)
Q Consensus 218 ----------------------~~~~p~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~i~W~~~~~~l~~ 264 (267)
...++.+...+ . .+. +|+.+.|.|. +.|.|.+.|+++|..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 89 KKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-Y-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp ------------------------------CCC-C-EEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred cccccccccccccccccccccccccccceecCC-c-eeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 00022222222 2 344 8999999998 789999999999998754
No 331
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.61 E-value=6.9e-15 Score=111.74 Aligned_cols=117 Identities=16% Similarity=0.346 Sum_probs=87.8
Q ss_pred ceEEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVR 189 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~ 189 (267)
....+.+|++++|.|.+.+.| .+.+.|++++ ..+ .. .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT 87 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC
Confidence 345788999999999998875 6799999842 211 00 112479999999
Q ss_pred CCCCeEEEEEEEcCCCC---c--eEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCC-----cEEEEE--
Q psy3045 190 KEDKGMYQCVIRNEQES---A--QASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-----EISWYL-- 257 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~~---~--~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~-- 257 (267)
.+|+|.|.|.+.+..+. . .....|.|. .+|.+...+....+.+|+.++|.|.+.+.|++ .+.|||
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~---~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS---SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCEEEEEC---CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred hhhCEEEEEEEeeccCccceeEEcCceeeeec---ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEEC
Confidence 99999999999997552 1 123455554 45666666777789999999999999998875 999999
Q ss_pred CCEE
Q psy3045 258 DGKK 261 (267)
Q Consensus 258 ~~~~ 261 (267)
+|+.
T Consensus 165 ~g~~ 168 (256)
T 1nqb_A 165 PGQS 168 (256)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 6654
No 332
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.61 E-value=3.3e-15 Score=111.38 Aligned_cols=158 Identities=19% Similarity=0.315 Sum_probs=96.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (226)
T 3mlr_H 8 GGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQ 87 (226)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCC
T ss_pred CCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 4678999999999999844 99998643322111 11123444432 2469999999
Q ss_pred cCCCeeEEEEEEcCCCc---------cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEe
Q psy3045 77 VEDSGKYLCVVNNSVGG---------ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTID 147 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~~~---------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 147 (267)
.+|+|.|+|.+.+..+. -...+.|.|...+ ...|.... .+....+.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~--~~~P~i~~-----------------------~~~~~~~~ 142 (226)
T 3mlr_H 88 ASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT--TKGPSVFP-----------------------LAPSSKST 142 (226)
T ss_dssp GGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC--CBCCEEEE-----------------------EEEEECST
T ss_pred cccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC--CCCCcEEE-----------------------ecCccccc
Confidence 99999999999764210 0112234443211 11111110 01111345
Q ss_pred cCCCEEEEeEeCCC-C-CceEEEEECCccCCC----------CC-----CCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 148 FGRPAQFTCKYEGN-P-VKTISWMKDGKPVPD----------HN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 148 ~g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~~----------~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.|+.+.|.|.+.+. | .+.+.| ++..+.. .+ .+.|.|.....+| |.|+|.|.|..+...
T Consensus 143 ~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 217 (226)
T 3mlr_H 143 SGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 217 (226)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred CCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcC
Confidence 78999999999875 4 468999 5444321 11 1367788888888 999999999875543
No 333
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.61 E-value=2.6e-15 Score=111.58 Aligned_cols=118 Identities=15% Similarity=0.352 Sum_probs=85.2
Q ss_pred EEecCCCEEEEeEeCCCC--CceEEEEECC--ccC---------------------CC---------CCCCeEEeccCCC
Q psy3045 145 TIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV---------------------PD---------HNEPVFRIDSVRK 190 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~---------------------~~---------~~~~~l~i~~~~~ 190 (267)
.+.+|+++.|.|.+.+.+ .+.+.|++++ ..+ .. .....|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 11 LVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRA 90 (222)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCc
Confidence 788899999999998765 6799999853 211 00 1124799999999
Q ss_pred CCCeEEEEEEEcCCC-----CceEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 191 EDKGMYQCVIRNEQE-----SAQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~-----~~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
+|+|.|.|.+.+..+ .......+.|... ..+|.+........+.+|+.+.|.|.+.|. |.| .+.|+++|+.+
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 170 (222)
T 1q9r_B 91 EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 170 (222)
T ss_dssp GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEc
Confidence 999999999998653 1222345666531 235665544333345689999999999985 888 99999999765
No 334
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.61 E-value=4.1e-15 Score=112.24 Aligned_cols=124 Identities=20% Similarity=0.447 Sum_probs=86.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC----------------C--------CCCCCeEEeccCCCCCCe
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV----------------P--------DHNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~----------------~--------~~~~~~l~i~~~~~~d~g 194 (267)
+....+.+|+.+.|.|.+.+.+.+.+.|+|.. ... . ......|.|.+++.+|+|
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 87 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSG 87 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCE
T ss_pred CceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCE
Confidence 34558889999999999998888999999832 110 0 012346999999999999
Q ss_pred EEEEEEEcCCC------CceEEEEEEEec---ccCCCeeecC-CceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 195 MYQCVIRNEQE------SAQASGELKLGG---RFDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 195 ~y~C~~~~~~~------~~~~~~~l~v~~---~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
.|.|.+.+..+ .......+.|.. ...+|.+... +....+.+|+.+.|.|.+.|. |++ .+.|+++|+.+
T Consensus 88 ~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l 167 (245)
T 3nfj_J 88 FYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEEC
Confidence 99999998322 112233555553 2235655432 333334569999999999985 444 78999999988
Q ss_pred CC
Q psy3045 263 VN 264 (267)
Q Consensus 263 ~~ 264 (267)
..
T Consensus 168 ~~ 169 (245)
T 3nfj_J 168 HS 169 (245)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 335
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=9.8e-16 Score=114.75 Aligned_cols=124 Identities=16% Similarity=0.266 Sum_probs=85.0
Q ss_pred CceEEEecCCCEEEEeEeCCCC-Cc-eEEEEECC--ccC----------C---C--------CCCCeEEeccCCCCCCeE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP-VK-TISWMKDG--KPV----------P---D--------HNEPVFRIDSVRKEDKGM 195 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p-~~-~~~W~~~~--~~~----------~---~--------~~~~~l~i~~~~~~d~g~ 195 (267)
+....+.+|+++.|.|.+.+.+ .+ .+.|++++ ..+ . . .....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 4445788999999999998764 34 79999863 221 0 0 012379999999999999
Q ss_pred EEEEEEcCCCC---ceEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEcCC
Q psy3045 196 YQCVIRNEQES---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKLVN 264 (267)
Q Consensus 196 y~C~~~~~~~~---~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l~~ 264 (267)
|.|.+.+..+. ......+.|... ..+|.+...+......+|+.+.|.|.+.|.+++ .+.|++||+.+..
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 180 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKA 180 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCS
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCC
Confidence 99999998762 111233444211 135555543333334468899999999986543 8999999998854
No 336
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.60 E-value=1.4e-14 Score=122.72 Aligned_cols=123 Identities=24% Similarity=0.404 Sum_probs=94.4
Q ss_pred CceEEEecCCCEEEEeEe-CCCCCceEEEEECCccCC------------------CCCCCeEEeccCCCCCCeEEEEEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKY-EGNPVKTISWMKDGKPVP------------------DHNEPVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~~~------------------~~~~~~l~i~~~~~~d~g~y~C~~~ 201 (267)
.....+..|++++|.|.+ .+.|.+.+.|++++..+. .....+|.|.+++.+|+|.|+|.+.
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEE
Confidence 345678899999999998 678889999999876321 0123579999999999999999999
Q ss_pred cCCCCc-eEEEEEEEecccCCCeeecCCceeEEecCCcE-EEEEEeec-CCCCcEEEEECCEEcCCC
Q psy3045 202 NEQESA-QASGELKLGGRFDPPVIKESFSDETLNPGPNY-YFKCIASG-NPTPEISWYLDGKKLVNA 265 (267)
Q Consensus 202 ~~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~~-~p~~~i~W~~~~~~l~~~ 265 (267)
+..+.. .....|.|......|.+..... .+.+|... .|.|.+.+ .|.|.|.|++||+.|...
T Consensus 453 n~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~ 517 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPGKPEIVDSAS--ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPN 517 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCCCCEEESCCS--EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTT
T ss_pred cCCCceeEEEEEEEEEcCCCCCEEEcCCc--ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCC
Confidence 988776 5667777765444555554433 35556554 56999998 699999999999998643
No 337
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=2.6e-15 Score=114.20 Aligned_cols=117 Identities=18% Similarity=0.297 Sum_probs=84.5
Q ss_pred EEecCCCEEEEeEeCCCC--CceEEEEECC--ccC------------------CC---------CCCCeEEeccCCCCCC
Q psy3045 145 TIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV------------------PD---------HNEPVFRIDSVRKEDK 193 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~------------------~~---------~~~~~l~i~~~~~~d~ 193 (267)
.+.+|++++|.|.+.+.| .+.+.|++++ ..+ .. .....|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 11 LVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp EECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCC
T ss_pred cccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccC
Confidence 688899999999998875 6799999852 211 00 1124799999999999
Q ss_pred eEEEEEEEcCCC-------Cc--eEEEEEEEeccc------------CCCeeecCCceeEEecCCcEEEEEEeecCCCCc
Q psy3045 194 GMYQCVIRNEQE-------SA--QASGELKLGGRF------------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPE 252 (267)
Q Consensus 194 g~y~C~~~~~~~-------~~--~~~~~l~v~~~~------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 252 (267)
|.|.|.+.+..+ .. .....|.|.... .++.+...+....+.+|+.++|.|.+.+.|.+.
T Consensus 91 G~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 170 (257)
T 1f3r_B 91 GTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNY 170 (257)
T ss_dssp EEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTC
T ss_pred EEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCc
Confidence 999999999753 11 123355565321 112334445566788999999999999999899
Q ss_pred EEEEE--CCEE
Q psy3045 253 ISWYL--DGKK 261 (267)
Q Consensus 253 i~W~~--~~~~ 261 (267)
+.||| +|+.
T Consensus 171 v~W~k~~~g~~ 181 (257)
T 1f3r_B 171 LAWYQQKLGEA 181 (257)
T ss_dssp EEEEEECTTSC
T ss_pred EEEEEECCCCC
Confidence 99999 5654
No 338
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.60 E-value=1.2e-15 Score=112.44 Aligned_cols=118 Identities=16% Similarity=0.355 Sum_probs=84.6
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC------------------CC---------CCCCeEEeccCCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV------------------PD---------HNEPVFRIDSVRKED 192 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~------------------~~---------~~~~~l~i~~~~~~d 192 (267)
..+.+|+++.|.|.+.+.+ .+.+.|+|++ ... .. .....|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 10 SLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 89 (210)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence 3788899999999998875 4799999853 211 00 012389999999999
Q ss_pred CeEEEEEEEcCCCCceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 193 KGMYQCVIRNEQESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 193 ~g~y~C~~~~~~~~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
+|.|.|.+.+.. .......+.|.. ...+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|+++|..+
T Consensus 90 ~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 161 (210)
T 3d9a_H 90 TATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 161 (210)
T ss_dssp CEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCccc
Confidence 999999999863 122234555542 1235665544433456789999999999987 878 99999998754
No 339
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.60 E-value=4.1e-16 Score=117.15 Aligned_cols=119 Identities=15% Similarity=0.227 Sum_probs=84.8
Q ss_pred EecCCCEEEEeEeCCC---CCc-eEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 146 IDFGRPAQFTCKYEGN---PVK-TISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~---p~~-~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+.+|+.++|.|.+.+. |.+ .+.|++++..+... ....|.|..+..+|+|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6689999999999876 655 99999988665321 11368888888999999999999987754
Q ss_pred eEEEEEEE-ecccCCCeeecCCceeEEecCCcEEEEEEeecC-CC-CcEEEEECCEEcCC
Q psy3045 208 QASGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVN 264 (267)
Q Consensus 208 ~~~~~l~v-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~l~~ 264 (267)
.....+.+ .....+|.+...+.......|+.+.|.|.+.|+ |+ ..|.|++||+.+..
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 168 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQEN 168 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCC
Confidence 33333322 112356766654433223358889999999985 44 38999999998753
No 340
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.60 E-value=9.5e-15 Score=111.60 Aligned_cols=112 Identities=19% Similarity=0.382 Sum_probs=84.6
Q ss_pred CceEEEecCCCEEEEeEeC---CCCCceEEEEECCccCCC-----------------------------CCCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYE---GNPVKTISWMKDGKPVPD-----------------------------HNEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~---~~p~~~~~W~~~~~~~~~-----------------------------~~~~~l~i~~~ 188 (267)
+....+.+|+.+.|.|.+. +.+.+.+.|++++..... .....|.|.++
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 91 (268)
T 3mj6_A 12 SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDV 91 (268)
T ss_dssp CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSC
T ss_pred CCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCC
Confidence 4455888999999999987 667789999996543211 12377999999
Q ss_pred CCCCCeEEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe---ecCCCCcEEEEEC
Q psy3045 189 RKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA---SGNPTPEISWYLD 258 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~i~W~~~ 258 (267)
+.+|+|.|+|.+.+..+.......+.+.+... .+....+.+|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 92 ~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 92 QKADEGIYTCEIRLKNESMVMKKPVELWVLPE------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp CGGGCEEEEEEEEETTCCCEEEEEEEEEEECC------CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred CHhHCEEEEEEEEecCCcceEEEEEEEEEecc------CCCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 99999999999998765554444444443212 2345678899999999999 5778899999994
No 341
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.60 E-value=9e-15 Score=115.70 Aligned_cols=162 Identities=16% Similarity=0.242 Sum_probs=100.6
Q ss_pred cccCCCCceeEEecCCCeEEEEEEec-----------------c--eeeeecccCcceeccc----------c-CCce--
Q psy3045 15 TFSSVSDIIRFKKPGGESFALLCEAQ-----------------E--NMWFKFIEGSSRKVAV----------P-LNDR-- 62 (267)
Q Consensus 15 ~~~~~~~~~~~~v~~g~~v~l~C~~~-----------------~--~~W~~~~~~~~~~~~~----------~-~~~~-- 62 (267)
.|....+...+.+.+|++++|.|.+. . +.|++...+....... . ...+
T Consensus 158 ~f~V~tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~ 237 (401)
T 3f8u_B 158 VLTVLTHTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVA 237 (401)
T ss_dssp EEEEEESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEE
T ss_pred EEEEeCCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEE
Confidence 35544444678999999999999864 2 8999863331110000 0 0011
Q ss_pred -----------EEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeec
Q psy3045 63 -----------VKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEI 131 (267)
Q Consensus 63 -----------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 131 (267)
....+.+|+|.+++.+|+|.|+|.+.+..+.....+.|.|..++.....+..
T Consensus 238 f~~~~~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~----------------- 300 (401)
T 3f8u_B 238 FAAWDDDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPAT----------------- 300 (401)
T ss_dssp EEEESCCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSS-----------------
T ss_pred EEeecccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCc-----------------
Confidence 2235679999999999999999999988776666777777764432211110
Q ss_pred CCCcccccCCceEEEecCC-CEEEEeEeCCC-CC--ceEEEE-ECCc---c--CC---------CCCC------CeEEec
Q psy3045 132 SPPLAAGVEPTVQTIDFGR-PAQFTCKYEGN-PV--KTISWM-KDGK---P--VP---------DHNE------PVFRID 186 (267)
Q Consensus 132 ~~~~~~~~~~~~~~~~~g~-~v~l~C~~~~~-p~--~~~~W~-~~~~---~--~~---------~~~~------~~l~i~ 186 (267)
...+..|+ .++|.|.+.+. |. +.+.|. +++. . .. ...+ +.|.+.
T Consensus 301 -----------~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~ 369 (401)
T 3f8u_B 301 -----------LARAAPGEAPPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPP 369 (401)
T ss_dssp -----------CCCCCTTCCCCCEEEEEEEEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECC
T ss_pred -----------ceeecCCCccEEEEEEecCCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEc
Confidence 00134576 79999999885 55 799995 7652 1 11 0111 223333
Q ss_pred cCCCC-CCeEEEEEEEcCC
Q psy3045 187 SVRKE-DKGMYQCVIRNEQ 204 (267)
Q Consensus 187 ~~~~~-d~g~y~C~~~~~~ 204 (267)
..+.+ +.+.|+|.+.|..
T Consensus 370 ~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 370 PVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp CCCGGGTTCEEEEEEECTT
T ss_pred cCccccCCCEEEEEEEcCC
Confidence 33222 3459999999976
No 342
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.59 E-value=1.6e-14 Score=103.75 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=81.8
Q ss_pred eEEEecCCCEEEEeEeCC-CCCceEEEEEC-CccC-------------CC--------CCCCeEEeccCCCCCCeEEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEG-NPVKTISWMKD-GKPV-------------PD--------HNEPVFRIDSVRKEDKGMYQCV 199 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~-~~~~-------------~~--------~~~~~l~i~~~~~~d~g~y~C~ 199 (267)
...+.+|++++|.|.+.+ .+.+.+.|+|+ +..+ .. ..+.+|.|.+++.+|+|.|+|.
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~ 87 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMR 87 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEE
Confidence 447889999999999754 34679999994 2111 00 2346799999999999999999
Q ss_pred EEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEECCEEcC
Q psy3045 200 IRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYLDGKKLV 263 (267)
Q Consensus 200 ~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~l~ 263 (267)
+.+.. .....+.|.|......|.+.. .+..+.|.|.+ .| |.|.|.|+++|..+.
T Consensus 88 v~~~~-~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 88 MLHET-EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp EESSS-EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred EEcCC-eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 98876 445566777764333344432 34669999999 56 889999999998763
No 343
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.59 E-value=4.3e-16 Score=116.87 Aligned_cols=118 Identities=17% Similarity=0.295 Sum_probs=79.2
Q ss_pred EecCCCEEEEeEeCCCC----CceEEEEECCccCCCC---------CC-----CeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 146 IDFGRPAQFTCKYEGNP----VKTISWMKDGKPVPDH---------NE-----PVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~p----~~~~~W~~~~~~~~~~---------~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+..|+.+.|.|.+.++. ...++|+++|..+... +. +.|.|.....+|.|.|+|.|.|..+..
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 44599999999999864 3489999999876421 11 346666556667899999999987643
Q ss_pred eEEEEEEE-ecccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcC
Q psy3045 208 QASGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 263 (267)
Q Consensus 208 ~~~~~l~v-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~ 263 (267)
.....+.+ .....+|.+...+.......|+.+.|.|.+.|+ |++ .+.|++||+.+.
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECC
Confidence 33333321 112356776665443333458999999999985 544 799999999875
No 344
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.59 E-value=8.8e-16 Score=114.86 Aligned_cols=121 Identities=13% Similarity=0.223 Sum_probs=83.1
Q ss_pred EEEecCCCEEEEeEeCCC-CC-c-eEEEEECCccC-CCC--------CC-----CeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGN-PV-K-TISWMKDGKPV-PDH--------NE-----PVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~-p~-~-~~~W~~~~~~~-~~~--------~~-----~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
..+..|+.++|.|.+.+. |. + .+.|+++|..+ ... +. ..|.|..+..+|.|.|+|.+.|..+.
T Consensus 23 ~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 23 GELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELP 102 (231)
T ss_dssp HHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCC
Confidence 356689999999999885 63 4 99999999877 321 11 25888888889999999999998765
Q ss_pred ceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecCCC--CcEEEEECCEEcCC
Q psy3045 207 AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 264 (267)
Q Consensus 207 ~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~l~~ 264 (267)
......+.+.. ...+|.+...........+..+.|.|.+.|+++ +.|.|++||+.+..
T Consensus 103 ~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 163 (231)
T 2w59_A 103 LPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPA 163 (231)
T ss_dssp SCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred CceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCC
Confidence 33333332210 123565544322111123567999999998643 68999999998854
No 345
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.59 E-value=1e-14 Score=109.96 Aligned_cols=123 Identities=24% Similarity=0.417 Sum_probs=85.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEEC--------------Ccc------------CC--CCCCCeEEeccCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKD--------------GKP------------VP--DHNEPVFRIDSVRKED 192 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--------------~~~------------~~--~~~~~~l~i~~~~~~d 192 (267)
+....+.+|+++.|.| ..+.+.+.+.|+|. +.. +. ......|.|.+++.+|
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 87 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALED 87 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGG
T ss_pred CceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhH
Confidence 4455888999999999 66778889999981 110 00 1123489999999999
Q ss_pred CeEEEEEEEcCC----CCceEEEEEEEec---ccCCCeeec-CCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 193 KGMYQCVIRNEQ----ESAQASGELKLGG---RFDPPVIKE-SFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 193 ~g~y~C~~~~~~----~~~~~~~~l~v~~---~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
+|.|.|.+.+.. ........+.|.. ...+|.+.. .+....+.+|+.+.|.|.+.|. |++ .+.|+++|+.+
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l 167 (245)
T 4ei6_B 88 SAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (245)
T ss_dssp CEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEEC
Confidence 999999998532 1222234455543 113555443 3344445679999999999984 444 89999999988
Q ss_pred CC
Q psy3045 263 VN 264 (267)
Q Consensus 263 ~~ 264 (267)
..
T Consensus 168 ~~ 169 (245)
T 4ei6_B 168 HS 169 (245)
T ss_dssp CT
T ss_pred CC
Confidence 65
No 346
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.59 E-value=3e-14 Score=108.24 Aligned_cols=118 Identities=17% Similarity=0.320 Sum_probs=87.3
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC------------------------CCCCCCeEEeccCCCCCC
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV------------------------PDHNEPVFRIDSVRKEDK 193 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~------------------------~~~~~~~l~i~~~~~~d~ 193 (267)
.+....+.+|++++|.|.+.+.+.+.+.|++.. ... .......|.|.++..+|+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 9 PDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp SCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred cCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 345568899999999999988899999999842 111 011234699999999999
Q ss_pred eEEEEEEEcCCCCce----EEEEEEEec-----------------ccCCCeeecCCceeEEecCCcEEEEEEeecCCCCc
Q psy3045 194 GMYQCVIRNEQESAQ----ASGELKLGG-----------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPE 252 (267)
Q Consensus 194 g~y~C~~~~~~~~~~----~~~~l~v~~-----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 252 (267)
|.|.|.+.+..+... ....|.|.. ...+|.+...+....+.+|+.++|.|.+.+. .+.
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~ 167 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNY 167 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CSE
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceE
Confidence 999999998754221 133555553 2246677777888888899999999999877 679
Q ss_pred EEEEEC
Q psy3045 253 ISWYLD 258 (267)
Q Consensus 253 i~W~~~ 258 (267)
+.|||.
T Consensus 168 v~W~k~ 173 (256)
T 3tf7_C 168 MYWYRQ 173 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999983
No 347
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.59 E-value=3.6e-15 Score=118.27 Aligned_cols=120 Identities=17% Similarity=0.335 Sum_probs=86.8
Q ss_pred eEEEecCCCEEEEeEeCCC--CCceEEEEEC--CccCC------------------C----------CCCCeEEeccCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEGN--PVKTISWMKD--GKPVP------------------D----------HNEPVFRIDSVRK 190 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~--~~~~~------------------~----------~~~~~l~i~~~~~ 190 (267)
...+.+|+.+.|.|.+.+. +.+.+.|+|+ +..+. . .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRS 88 (344)
T ss_dssp CEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 3478899999999999876 3678999986 33220 0 1124799999999
Q ss_pred CCCeEEEEEEEcCCCCceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CC-CcEEEEECCEEc
Q psy3045 191 EDKGMYQCVIRNEQESAQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKL 262 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~l 262 (267)
+|+|.|.|.+.+..+.......|.|.. ...+|.+...+....+.+|+.+.|.|.+.|. |. +.|.|+++|..+
T Consensus 89 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 89 EDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp GGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCT
T ss_pred ccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccC
Confidence 999999999998544333445666652 2245555543333346789999999999987 54 699999999763
No 348
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.58 E-value=2.5e-14 Score=110.25 Aligned_cols=120 Identities=17% Similarity=0.359 Sum_probs=87.2
Q ss_pred ceEEEecCCCEEEEeEeCCCC--CceEEEEECCc--cC-------------------C---------CCCCCeEEeccCC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNP--VKTISWMKDGK--PV-------------------P---------DHNEPVFRIDSVR 189 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~~--~~-------------------~---------~~~~~~l~i~~~~ 189 (267)
....+.+|++++|.|.+.+.+ .+.+.|+|++. .+ . ......|.|.+++
T Consensus 34 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 113 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLT 113 (282)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCC
Confidence 345788999999999998775 57999998541 11 0 0112579999999
Q ss_pred CCCCeEEEEEEEcCCCC---ce--EEEEEEEeccc------------CCCeeecCCceeEEecCCcEEEEEEeecCCCCc
Q psy3045 190 KEDKGMYQCVIRNEQES---AQ--ASGELKLGGRF------------DPPVIKESFSDETLNPGPNYYFKCIASGNPTPE 252 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~~---~~--~~~~l~v~~~~------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 252 (267)
.+|+|.|.|.+.+..+. .. ....+.|.... .++.+...+....+.+|++++|.|.+.+.+ +.
T Consensus 114 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~ 192 (282)
T 1qok_A 114 SEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SY 192 (282)
T ss_dssp GGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SC
T ss_pred hhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ce
Confidence 99999999999998651 11 22355565321 234555566677889999999999999998 99
Q ss_pred EEEEE--CCEEc
Q psy3045 253 ISWYL--DGKKL 262 (267)
Q Consensus 253 i~W~~--~~~~l 262 (267)
+.||| +|+.+
T Consensus 193 v~W~k~~~g~~~ 204 (282)
T 1qok_A 193 MHWFQQKPGTSP 204 (282)
T ss_dssp CEEEEECTTSCC
T ss_pred EEEEEECCCCCc
Confidence 99999 66543
No 349
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1e-14 Score=97.20 Aligned_cols=101 Identities=27% Similarity=0.408 Sum_probs=78.3
Q ss_pred ccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCce
Q psy3045 136 AAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 136 ~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 208 (267)
.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|...
T Consensus 10 ~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (118)
T 2eo9_A 10 VIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEAT 89 (118)
T ss_dssp CCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEE
T ss_pred EEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEE
Confidence 3344556668999999999999999999999999999887542 246799999999999999999999999888
Q ss_pred EEEEEEEecccCCCeeecCCceeEEecCC
Q psy3045 209 ASGELKLGGRFDPPVIKESFSDETLNPGP 237 (267)
Q Consensus 209 ~~~~l~v~~~~~~p~~~~~~~~~~~~~g~ 237 (267)
....|.|... ..|.+...+.+..+.+|.
T Consensus 90 ~~~~l~V~~~-~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 90 WSAYIEVQEF-GVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp EECCEEEECC-SCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeC-CCCccCCCCCCCccCCCC
Confidence 7888888753 234444445555555553
No 350
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.58 E-value=9.8e-15 Score=108.87 Aligned_cols=121 Identities=15% Similarity=0.325 Sum_probs=81.0
Q ss_pred ceEEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVR 189 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~ 189 (267)
....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ .. .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 445788999999999998876 6799999854 211 00 123579999999
Q ss_pred CCCCeEEEEEEEcCCCC-ceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 190 KEDKGMYQCVIRNEQES-AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~~-~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
.+|+|.|.|.+.+.... ......|.|.. ...+|.+........+.+|+.+.|.|.+.|. |.+ .+.|+++|..+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 99999999999985321 11223566653 1234555543323356789999999999985 766 99999999764
No 351
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.58 E-value=2.2e-14 Score=108.53 Aligned_cols=119 Identities=17% Similarity=0.329 Sum_probs=83.7
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccC----------------C-------CCCCCeEEeccCCCCCCeEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV----------------P-------DHNEPVFRIDSVRKEDKGMY 196 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~----------------~-------~~~~~~l~i~~~~~~d~g~y 196 (267)
.+....+.+|+.++|.|.+.+.|.+.+.|+++.... . ......|.|.++..+|+|.|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (250)
T 3esu_F 10 STSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTY 89 (250)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEE
Confidence 345567899999999999999998899999853110 0 01123799999999999999
Q ss_pred EEEEEcCCCCce-EEEEEEEecc----------------cCCCeeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEE
Q psy3045 197 QCVIRNEQESAQ-ASGELKLGGR----------------FDPPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYL 257 (267)
Q Consensus 197 ~C~~~~~~~~~~-~~~~l~v~~~----------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~ 257 (267)
.|.+.+..+... ....+.|... ..++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|||
T Consensus 90 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 169 (250)
T 3esu_F 90 FCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVK 169 (250)
T ss_dssp EEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE
T ss_pred EEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEE
Confidence 999998654321 2334555431 0122333344556788999999999999877 67999999
Q ss_pred C
Q psy3045 258 D 258 (267)
Q Consensus 258 ~ 258 (267)
+
T Consensus 170 ~ 170 (250)
T 3esu_F 170 Q 170 (250)
T ss_dssp E
T ss_pred E
Confidence 7
No 352
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.58 E-value=1.6e-14 Score=110.98 Aligned_cols=119 Identities=18% Similarity=0.312 Sum_probs=83.7
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCcc-----CC----------C--------CCCCeEEeccCCCCCCeEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKP-----VP----------D--------HNEPVFRIDSVRKEDKGMY 196 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~-----~~----------~--------~~~~~l~i~~~~~~d~g~y 196 (267)
.+....+.+|++++|.|.+.+.|.+.+.|++++.. +. . .....|.|.++..+|+|.|
T Consensus 18 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 97 (276)
T 3auv_A 18 SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 97 (276)
T ss_dssp ECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEE
Confidence 34556889999999999999988889999986421 00 0 1123799999999999999
Q ss_pred EEEEEcCCCC-ceEEEEEEEeccc-----------CCCeeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEEC
Q psy3045 197 QCVIRNEQES-AQASGELKLGGRF-----------DPPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 258 (267)
Q Consensus 197 ~C~~~~~~~~-~~~~~~l~v~~~~-----------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~ 258 (267)
.|.+.+..+. ......+.|.... .++.....+....+.+|+.+.|.|.+.+.+ .+.+.|||+
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 9999987543 2222345554321 112222334566889999999999999877 479999996
No 353
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.58 E-value=1.2e-14 Score=109.32 Aligned_cols=123 Identities=20% Similarity=0.371 Sum_probs=85.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--c-----------------------CC--CCCCCeEEeccCCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--P-----------------------VP--DHNEPVFRIDSVRKEDK 193 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~-----------------------~~--~~~~~~l~i~~~~~~d~ 193 (267)
+....+.+|+++.|.|.+.+ +.+.+.|+|... . +. ......|.|.+++.+|+
T Consensus 9 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 87 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDS 87 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGC
T ss_pred cceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHC
Confidence 44558899999999999875 777999998211 0 00 11245799999999999
Q ss_pred eEEEEEEEcCC---CCceEEEEEEEec---ccCCCeeec-CCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEEcCC
Q psy3045 194 GMYQCVIRNEQ---ESAQASGELKLGG---RFDPPVIKE-SFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKKLVN 264 (267)
Q Consensus 194 g~y~C~~~~~~---~~~~~~~~l~v~~---~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~l~~ 264 (267)
|.|.|.+.+.. ........+.+.. ...+|.+.. .+....+.+|+.+.|.|.+.| .|.+ .+.|+++|+.+..
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~ 167 (240)
T 3q5y_A 88 AMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 167 (240)
T ss_dssp EEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcC
Confidence 99999998321 1122234455543 224565553 334445567899999999998 5556 7999999998864
No 354
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=3e-14 Score=94.29 Aligned_cols=83 Identities=24% Similarity=0.290 Sum_probs=69.9
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+..
T Consensus 10 i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 89 (114)
T 2cqv_A 10 IIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSR 89 (114)
T ss_dssp ESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEE
T ss_pred EEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcE
Confidence 3345566689999999999999999999999999998886432 3579999999999999999999999988
Q ss_pred eEEEEEEEeccc
Q psy3045 208 QASGELKLGGRF 219 (267)
Q Consensus 208 ~~~~~l~v~~~~ 219 (267)
...+.|.|....
T Consensus 90 ~~~~~l~V~~~p 101 (114)
T 2cqv_A 90 QAQVNLTVVDKP 101 (114)
T ss_dssp ECCEEEEEECSC
T ss_pred EEEEEEEEECCC
Confidence 888888887543
No 355
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.58 E-value=2.3e-14 Score=109.05 Aligned_cols=119 Identities=14% Similarity=0.244 Sum_probs=81.8
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC----------------------------CCCCCCeEEeccCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV----------------------------PDHNEPVFRIDSVRK 190 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~----------------------------~~~~~~~l~i~~~~~ 190 (267)
+....+.+|++++|.|.+.+.+.+.+.|++.. ... .......|.|.+++.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 88 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIE 88 (259)
T ss_dssp --CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCG
T ss_pred CceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCc
Confidence 44558899999999999998888899999831 111 011235699999999
Q ss_pred CCCeEEEEEEEcCCCC---ceEEEEEEEecccC--------------CCeeecCCceeEEecCCcEEEEEEeecC-CCCc
Q psy3045 191 EDKGMYQCVIRNEQES---AQASGELKLGGRFD--------------PPVIKESFSDETLNPGPNYYFKCIASGN-PTPE 252 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~~---~~~~~~l~v~~~~~--------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~ 252 (267)
+|+|.|.|.+.+..+. ......|.|..... +|.+...+....+.+|+++.|.|.+.+. +.+.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 168 (259)
T 3omz_A 89 NDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYY 168 (259)
T ss_dssp GGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCE
T ss_pred ccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCce
Confidence 9999999999987652 22234555553211 3566667777889999999999999875 7789
Q ss_pred EEEEECC
Q psy3045 253 ISWYLDG 259 (267)
Q Consensus 253 i~W~~~~ 259 (267)
+.|||++
T Consensus 169 v~W~k~~ 175 (259)
T 3omz_A 169 IFWYKRL 175 (259)
T ss_dssp EEEEEEC
T ss_pred EEEeeeC
Confidence 9999843
No 356
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.58 E-value=2.7e-15 Score=111.37 Aligned_cols=117 Identities=21% Similarity=0.444 Sum_probs=85.4
Q ss_pred EEecCCCEEEEeEeCCCCC-----ceEEEEECCccC---------------CC----------CCCCeEEeccCCCCCCe
Q psy3045 145 TIDFGRPAQFTCKYEGNPV-----KTISWMKDGKPV---------------PD----------HNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~-----~~~~W~~~~~~~---------------~~----------~~~~~l~i~~~~~~d~g 194 (267)
.+.+|+++.|.|.+.+.+. +.+.|++++... .. .....|.|.+++.+|+|
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 85 (222)
T 4i0k_A 6 VALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEG 85 (222)
T ss_dssp CCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCS
T ss_pred EEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCE
Confidence 5778999999999887653 789999987543 00 01567999999999999
Q ss_pred EEEEEEEcCCCCceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEe-ecCCCCcEEEEE-CCEEcC
Q psy3045 195 MYQCVIRNEQESAQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIA-SGNPTPEISWYL-DGKKLV 263 (267)
Q Consensus 195 ~y~C~~~~~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~-~~~~l~ 263 (267)
.|+|.+.+.. .......+.|.....+|.+...+. ..+.+|+.+.|.|.+ .+.|.+.+.|++ +|..+.
T Consensus 86 ~Y~C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 86 SYTCFVSIQD-FDSAAVSLQVAAPYSKPSMTLEPN-KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLT 154 (222)
T ss_dssp CEEEEEEECC-CCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred EEEEEEEeCC-CceEEEEEEEEcCCCCCcEEeCCC-ceecCCceEEEEEecccccCCCeEEEEcCCCccCC
Confidence 9999999863 334455566655445567666553 367889999999999 789999999999 555443
No 357
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.58 E-value=1.5e-14 Score=109.89 Aligned_cols=115 Identities=19% Similarity=0.371 Sum_probs=84.0
Q ss_pred EEEecCCCEEEEeEeCCC--CCceEEEEECCc--cCC---------------------------CCCCCeEEeccCCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGN--PVKTISWMKDGK--PVP---------------------------DHNEPVFRIDSVRKED 192 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~--~~~---------------------------~~~~~~l~i~~~~~~d 192 (267)
..+.+|++++|.|.+.+. +.+.+.|++... ... ......|.|.+++.+|
T Consensus 18 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 18 SLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp SEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 368899999999998874 478999998431 100 0112369999999999
Q ss_pred CeEEEEEEEcCCCC----ceEEEEEEEecc-----------cCCCeeecCCceeEEecCCcEEEEEEeecCCCC-cEEEE
Q psy3045 193 KGMYQCVIRNEQES----AQASGELKLGGR-----------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP-EISWY 256 (267)
Q Consensus 193 ~g~y~C~~~~~~~~----~~~~~~l~v~~~-----------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~ 256 (267)
+|.|.|.+.+..+. ......+.|... ..++.+...+....+.+|++++|.|.+.+.+.+ .+.||
T Consensus 98 sG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~ 177 (257)
T 3gkz_A 98 TATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWY 177 (257)
T ss_dssp CEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEE
T ss_pred CEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEE
Confidence 99999999986211 122345556542 124666777777889999999999999998887 99999
Q ss_pred EC
Q psy3045 257 LD 258 (267)
Q Consensus 257 ~~ 258 (267)
|+
T Consensus 178 k~ 179 (257)
T 3gkz_A 178 QQ 179 (257)
T ss_dssp EE
T ss_pred EE
Confidence 83
No 358
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=6.2e-14 Score=104.45 Aligned_cols=150 Identities=16% Similarity=0.246 Sum_probs=94.4
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceecc--------ccCCceEEEE------eeEEEEeecccCCCe
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVA--------VPLNDRVKQV------SGTLIIKEAKVEDSG 81 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~--------~~~~~~~~~~------~~~l~i~~~~~~d~G 81 (267)
..+.+.+|++++|.|.+.+ +.|++...+...... .....|+... ..+|.|.+++.+|+|
T Consensus 9 ~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg 88 (229)
T 1hxm_A 9 QTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEG 88 (229)
T ss_dssp SEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCE
T ss_pred CEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCe
Confidence 6789999999999999873 899986443211110 1124555543 248999999999999
Q ss_pred eEEEEEEcCCC------c--cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEE
Q psy3045 82 KYLCVVNNSVG------G--ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQ 153 (267)
Q Consensus 82 ~Y~C~~~~~~~------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~ 153 (267)
.|+|.+.+..+ . -...+.|.|.........|... +.. ..+.
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~------------------------------~~~-~~~~ 137 (229)
T 1hxm_A 89 SYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVF------------------------------VMK-NGTN 137 (229)
T ss_dssp EEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEE------------------------------EEE-ETTE
T ss_pred EEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEE------------------------------EcC-CCCe
Confidence 99999987531 1 1123456665422211122211 111 2358
Q ss_pred EEeEeCCC-CC-ceEEEEECCccCCCC-------CCCeEEeccCC-CCCCeEEEEEEEcCC
Q psy3045 154 FTCKYEGN-PV-KTISWMKDGKPVPDH-------NEPVFRIDSVR-KEDKGMYQCVIRNEQ 204 (267)
Q Consensus 154 l~C~~~~~-p~-~~~~W~~~~~~~~~~-------~~~~l~i~~~~-~~d~g~y~C~~~~~~ 204 (267)
|.|.+.+. |. ..+.|+++ ..+... ....+.+.... .++.|.|+|.+.|..
T Consensus 138 L~C~~~g~~P~~i~v~W~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~ 197 (229)
T 1hxm_A 138 VACLVKEFYPKDIRINLVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDN 197 (229)
T ss_dssp EEEEEESCBSSCCEEEEECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETT
T ss_pred EEEEEEEEeCCCEEEEEecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCC
Confidence 99999886 54 38999998 665321 22344443333 367889999999976
No 359
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.57 E-value=4e-14 Score=100.84 Aligned_cols=146 Identities=16% Similarity=0.212 Sum_probs=94.3
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVE 97 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (267)
+...|.+|+++.|.|.+.. +.|....+. ... ...+ .....|.|.+++. | |.|.|.+..........
T Consensus 7 ~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~----~~~-~~~~--~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~ 77 (185)
T 1iam_A 7 SKVILPRGGSVLVTCSTSCDQPKLLGIETPLPK----KEL-LLPG--NNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAK 77 (185)
T ss_dssp SEEEEETTEEEEEEEEECSSSCSEEEEECSSCE----EEE-CSSS--SSEEEEEEEEECS-C-BCCEEEEECSSCEEEEE
T ss_pred CCcEEeCCCCEEEEEEccCCCCccceEEeeCCC----ccE-eccC--CceeEEEEEecCc-C-CEEEEEEECCCCceEEE
Confidence 5678999999999999975 556431000 000 0111 1224688999973 4 99999997654456777
Q ss_pred EEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CCc--eEEEEECCcc
Q psy3045 98 TVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PVK--TISWMKDGKP 174 (267)
Q Consensus 98 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~--~~~W~~~~~~ 174 (267)
+.|.|..+|.. ..+ .+....+.+|+.++|.|.+.+. |.. .|+||+++..
T Consensus 78 ~~l~V~~~P~~------v~i----------------------~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~ 129 (185)
T 1iam_A 78 TFLTVYWTPER------VEL----------------------APLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKE 129 (185)
T ss_dssp CEEEEEBCCSE------EEE----------------------CCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEE
T ss_pred EEEEEeCCCCC------CEE----------------------ccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEE
Confidence 77887764331 111 1111257889999999999885 543 5899999987
Q ss_pred CCC------CCCCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 175 VPD------HNEPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 175 ~~~------~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
+.. ..+.++++.....+|...|+|.|.+..+
T Consensus 130 l~~~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 130 LKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred cccccCCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 743 1123556554444444499999998875
No 360
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.57 E-value=2.9e-14 Score=108.30 Aligned_cols=119 Identities=18% Similarity=0.379 Sum_probs=87.2
Q ss_pred cCCceEEEecCCCEEEEeEeCCC--CCceEEEEECC--ccCC----------------------------CCCCCeEEec
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG--KPVP----------------------------DHNEPVFRID 186 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~~~----------------------------~~~~~~l~i~ 186 (267)
..+....+.+|++++|.|.+.+. +.+.+.|++.. ..+. ......|.|.
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 90 (256)
T 3juy_B 11 VQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 90 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEEC
Confidence 34556689999999999998874 57799999742 1110 0112469999
Q ss_pred cCCCCCCeEEEEEEEcC------------CCCceEEEEEEEecccC------------CCeeecCCceeEEecCCcEEEE
Q psy3045 187 SVRKEDKGMYQCVIRNE------------QESAQASGELKLGGRFD------------PPVIKESFSDETLNPGPNYYFK 242 (267)
Q Consensus 187 ~~~~~d~g~y~C~~~~~------------~~~~~~~~~l~v~~~~~------------~p~~~~~~~~~~~~~g~~~~l~ 242 (267)
+++.+|+|.|.|.+.+. .........|.|..... ++.+...+....+.+|++++|.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 170 (256)
T 3juy_B 91 SLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFS 170 (256)
T ss_dssp SCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEE
T ss_pred CCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEE
Confidence 99999999999999986 22222344566654211 4566666777889999999999
Q ss_pred EEeecCCC-CcEEEEE
Q psy3045 243 CIASGNPT-PEISWYL 257 (267)
Q Consensus 243 C~~~~~p~-~~i~W~~ 257 (267)
|.+.+.+. +.+.|||
T Consensus 171 C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 171 CRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp EEESSCCTTCCEEEEE
T ss_pred EEECCCcCCeeEEEEE
Confidence 99998876 8999998
No 361
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=112.20 Aligned_cols=126 Identities=19% Similarity=0.382 Sum_probs=88.3
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC--------------C----C---------CCCCeEEeccCC
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV--------------P----D---------HNEPVFRIDSVR 189 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~--------------~----~---------~~~~~l~i~~~~ 189 (267)
..+....+.+|+++.|.|.+.+.+.+.+.|++++ ... . . .....|.|.+++
T Consensus 29 ~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (279)
T 2wbj_D 29 QHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAH 108 (279)
T ss_dssp EECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCC
T ss_pred eCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCC
Confidence 3355668999999999999988888899999864 110 0 0 112379999999
Q ss_pred CCCCeEEEEEEEcCCC----C--ceEEEEEEEecc---cCCCeeecC-CceeEEecCCcEEEEEEeecC-CC-CcEEEEE
Q psy3045 190 KEDKGMYQCVIRNEQE----S--AQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PT-PEISWYL 257 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~----~--~~~~~~l~v~~~---~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~ 257 (267)
.+|+|.|.|.+.+..+ . ......+.|... ..+|.+... +....+.+|+.+.|.|.+.|. |+ +.|.|++
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 188 (279)
T 2wbj_D 109 PEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 188 (279)
T ss_dssp GGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEE
T ss_pred ccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEE
Confidence 9999999999998421 1 112234556532 135655543 333344578999999999987 43 5999999
Q ss_pred CCEEcCC
Q psy3045 258 DGKKLVN 264 (267)
Q Consensus 258 ~~~~l~~ 264 (267)
||+.+..
T Consensus 189 ~g~~l~~ 195 (279)
T 2wbj_D 189 NGKEVHS 195 (279)
T ss_dssp TTEECCT
T ss_pred CCEECCC
Confidence 9998864
No 362
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.57 E-value=8.2e-15 Score=109.37 Aligned_cols=119 Identities=18% Similarity=0.363 Sum_probs=82.8
Q ss_pred EEEecCCCEEEEeEeCCCCC----ceEEEEECC--ccCC---------------------------CCCCCeEEeccCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNPV----KTISWMKDG--KPVP---------------------------DHNEPVFRIDSVRK 190 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~----~~~~W~~~~--~~~~---------------------------~~~~~~l~i~~~~~ 190 (267)
..+.+|++++|.|.+.+.+. +.+.|+|+. ..+. ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 10 GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT 89 (228)
T ss_dssp SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence 37889999999999988764 889999852 2210 00125799999999
Q ss_pred CCCeEEEEEEEcCCC------C---ceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEEC
Q psy3045 191 EDKGMYQCVIRNEQE------S---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLD 258 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~------~---~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~ 258 (267)
+|+|.|.|.+.+..+ . ......|.|.. ...+|.+........+.+|+.+.|.|.+.|. |.| .+.|+++
T Consensus 90 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~ 169 (228)
T 3bae_H 90 ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 169 (228)
T ss_dssp GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeC
Confidence 999999999998654 1 11224566653 2235665543333346789999999999986 777 9999999
Q ss_pred CEEc
Q psy3045 259 GKKL 262 (267)
Q Consensus 259 ~~~l 262 (267)
|..+
T Consensus 170 ~~~~ 173 (228)
T 3bae_H 170 SLSS 173 (228)
T ss_dssp TCCT
T ss_pred Cccc
Confidence 8753
No 363
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.57 E-value=2.8e-14 Score=108.39 Aligned_cols=115 Identities=17% Similarity=0.325 Sum_probs=85.2
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccCC----------------------------CCCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPVP----------------------------DHNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~~----------------------------~~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+.+ .+.+.|++.. ..+. ......|.|.++..+
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE 91 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence 4688999999999998865 6799999843 1110 011234999999999
Q ss_pred CCeEEEEEEEcC----CCCceEEEEEEEecc------------c-CCCeeecCCceeEEecCCcEEEEEEeecCCCCcEE
Q psy3045 192 DKGMYQCVIRNE----QESAQASGELKLGGR------------F-DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEIS 254 (267)
Q Consensus 192 d~g~y~C~~~~~----~~~~~~~~~l~v~~~------------~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~ 254 (267)
|+|.|.|.+.+. .........|.|... . .+|.+...+....+.+|+.++|.|.+.+.|.+.+.
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~ 171 (256)
T 3umt_A 92 DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLN 171 (256)
T ss_dssp GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEE
T ss_pred cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEE
Confidence 999999999987 222223445656531 0 15667777777889999999999999999888999
Q ss_pred EEEC
Q psy3045 255 WYLD 258 (267)
Q Consensus 255 W~~~ 258 (267)
|||+
T Consensus 172 W~k~ 175 (256)
T 3umt_A 172 WLQQ 175 (256)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9984
No 364
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.57 E-value=4e-14 Score=106.90 Aligned_cols=118 Identities=18% Similarity=0.338 Sum_probs=82.0
Q ss_pred CceEEEecCCCEEEEeEeCCCC-----CceEEEEECC--ccCC-------------C--------CCCCeEEeccCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP-----VKTISWMKDG--KPVP-------------D--------HNEPVFRIDSVRKED 192 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p-----~~~~~W~~~~--~~~~-------------~--------~~~~~l~i~~~~~~d 192 (267)
+....+.+|++++|.|.+.+.+ .+.+.|++++ ..+. . .....|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 87 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 87 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHH
Confidence 4455889999999999998887 6899999853 2110 0 112479999999999
Q ss_pred CeEEEEEEEcCCCC-ceEEEEEEEecccC----------CCeeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEEC
Q psy3045 193 KGMYQCVIRNEQES-AQASGELKLGGRFD----------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 258 (267)
Q Consensus 193 ~g~y~C~~~~~~~~-~~~~~~l~v~~~~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~ 258 (267)
+|.|.|.+.+..+. ......|.|..... ++.....+....+.+|+.++|.|.+.+.+ .+.+.|||+
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 88 LGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 99999999987543 11234556653211 22222233334688999999999999875 469999996
No 365
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.57 E-value=1e-14 Score=108.57 Aligned_cols=119 Identities=13% Similarity=0.298 Sum_probs=84.1
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ .. .....|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (225)
T 1op3_H 10 GLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE 89 (225)
T ss_dssp EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 4788999999999998776 6789999853 211 00 11247999999999
Q ss_pred CCeEEEEEEEcCCC-----C---ceEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCE
Q psy3045 192 DKGMYQCVIRNEQE-----S---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGK 260 (267)
Q Consensus 192 d~g~y~C~~~~~~~-----~---~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~ 260 (267)
|+|.|.|.+.+..+ . ......|.|... ..+|.+........+.+|+.+.|.|.+.|. |.| .|.|+++|.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 169 (225)
T 1op3_H 90 DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 169 (225)
T ss_dssp GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSC
T ss_pred hCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCC
Confidence 99999999998754 1 112345666531 234555432222235689999999999986 766 999999997
Q ss_pred Ec
Q psy3045 261 KL 262 (267)
Q Consensus 261 ~l 262 (267)
.+
T Consensus 170 ~~ 171 (225)
T 1op3_H 170 TS 171 (225)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 366
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.57 E-value=3.5e-14 Score=106.91 Aligned_cols=118 Identities=17% Similarity=0.309 Sum_probs=82.0
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC--------------C-------CCCCCeEEeccCCCCCCeEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV--------------P-------DHNEPVFRIDSVRKEDKGMYQ 197 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~--------------~-------~~~~~~l~i~~~~~~d~g~y~ 197 (267)
+....+.+|++++|.|.+.+.|.+.+.|+++. ..+ . ......|.|.++..+|+|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEE
Confidence 44558899999999999999888899999853 111 0 012347999999999999999
Q ss_pred EEEEcCCCCc-eEEEEEEEecccC----------CCeeecCCceeEEecCCcEEEEEEeecCC--CCcEEEEEC
Q psy3045 198 CVIRNEQESA-QASGELKLGGRFD----------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEISWYLD 258 (267)
Q Consensus 198 C~~~~~~~~~-~~~~~l~v~~~~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~ 258 (267)
|.+.+..+.. .....|.|..... ++.....+....+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 88 C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 88 CQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp EEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 9999875321 1233455543111 11122222334688999999999999876 478999984
No 367
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=1.1e-14 Score=107.63 Aligned_cols=119 Identities=15% Similarity=0.366 Sum_probs=84.4
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccCC---------------------------CCCCCeEEeccCCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPVP---------------------------DHNEPVFRIDSVRKED 192 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~~---------------------------~~~~~~l~i~~~~~~d 192 (267)
..+.+|+++.|.|.+.+.+ .+.+.|+++. ..+. ......|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 3788999999999998764 5789999853 2110 0012379999999999
Q ss_pred CeEEEEEEEcCCCC---ceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 193 KGMYQCVIRNEQES---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 193 ~g~y~C~~~~~~~~---~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
+|.|.|.+.+..+. ......|.|.. ...+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|+++|..+
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred CEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 99999999986421 12234566652 2234655543323345789999999999986 777 99999998754
No 368
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.2e-14 Score=95.38 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=74.1
Q ss_pred CCcccccCCceEEEecCCCEEEEeEeCCC---CCceEEEEECCc---------cCCCC---------CCCeEEeccCCCC
Q psy3045 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGN---PVKTISWMKDGK---------PVPDH---------NEPVFRIDSVRKE 191 (267)
Q Consensus 133 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~---p~~~~~W~~~~~---------~~~~~---------~~~~l~i~~~~~~ 191 (267)
+...+...+....+.+|++++|.|.+.+. |.|.|.|||+.. .+... ....|.|.++...
T Consensus 6 ~~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 6 SGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SSCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred cccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 34445566777799999999999998764 789999999742 11100 1367999999999
Q ss_pred CCeEEEEEEEcCCCCceEEEEEEEec-ccCCCeeecCC
Q psy3045 192 DKGMYQCVIRNEQESAQASGELKLGG-RFDPPVIKESF 228 (267)
Q Consensus 192 d~g~y~C~~~~~~~~~~~~~~l~v~~-~~~~p~~~~~~ 228 (267)
|+|.|+|+|.|..+..+.++.|.|.+ ....|.+.+.|
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~~i~~ 123 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGP 123 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEECCCCSCCCCCCSC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEecCCCCCeEEecc
Confidence 99999999999999888899999986 44456665554
No 369
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.56 E-value=3.7e-14 Score=106.54 Aligned_cols=123 Identities=17% Similarity=0.386 Sum_probs=86.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCc--cC-----------------C--------CCCCCeEEeccCCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--PV-----------------P--------DHNEPVFRIDSVRKEDK 193 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~~-----------------~--------~~~~~~l~i~~~~~~d~ 193 (267)
+....+.+|+++.|.|.+. .+.+.+.|+|++. .+ . ......|.|.+++.+|+
T Consensus 6 p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 84 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT 84 (238)
T ss_dssp CSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC
T ss_pred CCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC
Confidence 4455889999999999985 4578999998641 10 0 01224799999999999
Q ss_pred eEEEEEEEcCCC---C--ceEEEEEEEecc---cCCCeeecC-CceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 194 GMYQCVIRNEQE---S--AQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 194 g~y~C~~~~~~~---~--~~~~~~l~v~~~---~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
|.|.|.+.+..+ . ......|.|... ..+|.+... +....+.+|+.+.|.|.+.|. |.+ .+.|++||+.+
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~ 164 (238)
T 1bec_A 85 SVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 164 (238)
T ss_dssp EEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEE
T ss_pred EEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEEC
Confidence 999999998642 1 112234556532 135665543 333445679999999999986 655 99999999987
Q ss_pred CC
Q psy3045 263 VN 264 (267)
Q Consensus 263 ~~ 264 (267)
..
T Consensus 165 ~~ 166 (238)
T 1bec_A 165 HS 166 (238)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 370
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=5.6e-14 Score=92.99 Aligned_cols=90 Identities=26% Similarity=0.352 Sum_probs=72.2
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDS 80 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~ 80 (267)
+..||.|...+ ..+.+.+|+++.|.|.+.+ +.|++++... ....++... ...|.|.+++.+|+
T Consensus 4 ~~~pp~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~------~~~~~~~~~~~~~~~~L~I~~v~~~D~ 75 (114)
T 2cqv_A 4 GSSGPQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQI------QESEHMKVENSENGSKLTILAARQEHC 75 (114)
T ss_dssp CCCCCEESCCC--CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBC------CCSSSEEEEECSSEEEEEETTCCTTTC
T ss_pred CCCCCEEEeCC--CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEEC------cCCCCEEEEEcCCEEEEEECCCChhcC
Confidence 34579998877 7899999999999999988 9999964322 122233333 56899999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|.|+|.+.|..|.....+.|.|...+.
T Consensus 76 G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 76 GCYTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp EEEEEEEECSSCEEECCEEEEEECSCS
T ss_pred EEEEEEEEECCCcEEEEEEEEEECCCC
Confidence 999999999999888888888887554
No 371
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.56 E-value=6.2e-16 Score=116.00 Aligned_cols=167 Identities=16% Similarity=0.256 Sum_probs=93.1
Q ss_pred CCcccCCCCceeEE-ecCCCeEEEEEEecc---------eeeeecccCcceecc---ccCCceEEEEeeEEEEeecccCC
Q psy3045 13 APTFSSVSDIIRFK-KPGGESFALLCEAQE---------NMWFKFIEGSSRKVA---VPLNDRVKQVSGTLIIKEAKVED 79 (267)
Q Consensus 13 ~P~~~~~~~~~~~~-v~~g~~v~l~C~~~~---------~~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d 79 (267)
+|.+.+.+. .... +..|+++.|.|.+.+ +.|++++........ ....+......+.|.|......|
T Consensus 22 ~P~v~i~~p-s~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d 100 (240)
T 4acp_A 22 GPSVFLFPP-KPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 100 (240)
T ss_dssp -CEEEEECC-CHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHH
T ss_pred CCEEEEECc-ChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccC
Confidence 454444432 3334 567999999999885 789997432211110 01112222334578888888888
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeC
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 159 (267)
.|.|+|.+.+..+.......+... ......+.... ..+. .....|+.+.|.|.+.
T Consensus 101 ~~~YtC~v~h~~~~~~~~~~i~~~--~~~~~~P~V~v----------------------~~~~-~~~~~g~~~~L~C~~~ 155 (240)
T 4acp_A 101 GKEYKCKVSNKALPAPIEKTISKA--KGQPREPQVYT----------------------LPPS-RDELTKNQVSLTCLVK 155 (240)
T ss_dssp TCCEEEEEECC----CEEEEECCC--CSCCBCCEEEE----------------------ECCC-GGGGGSSEEEEEEEEE
T ss_pred CCEEEEEEEcCCCCcccccccccc--CCCCCCCEEEE----------------------ECCC-hHHhcCCceEEEEEEe
Confidence 999999999977543222222110 00111111110 0000 0122378899999999
Q ss_pred CC-CC-ceEEEEECCccCCCC--------CC------CeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 160 GN-PV-KTISWMKDGKPVPDH--------NE------PVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 160 ~~-p~-~~~~W~~~~~~~~~~--------~~------~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
++ |. ..+.|+++|..+... .+ +.|.+.....++.|.|+|.|.|..-
T Consensus 156 gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 156 GFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 85 54 489999999876421 11 2344444444578999999999764
No 372
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.56 E-value=2.2e-14 Score=106.68 Aligned_cols=120 Identities=18% Similarity=0.375 Sum_probs=84.2
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~~~ 191 (267)
..+.+|+++.|.|.+.+.+ .+.+.|+|+. ..+ .. .....|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 10 GVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 3788999999999988765 4789999853 111 00 01247999999999
Q ss_pred CCeEEEEEEEcCCC---C---ceEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEE-CCEE
Q psy3045 192 DKGMYQCVIRNEQE---S---AQASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYL-DGKK 261 (267)
Q Consensus 192 d~g~y~C~~~~~~~---~---~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~-~~~~ 261 (267)
|+|.|.|.+.+..+ . ......|.|.. ...+|.+........+.+|+.+.|.|.+.|. |.| .+.|++ +|+.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSD 169 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCB
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCc
Confidence 99999999998652 1 11223566652 2235555532222245689999999999987 777 999999 9987
Q ss_pred cC
Q psy3045 262 LV 263 (267)
Q Consensus 262 l~ 263 (267)
+.
T Consensus 170 l~ 171 (223)
T 1dee_B 170 IS 171 (223)
T ss_dssp CS
T ss_pred cc
Confidence 74
No 373
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.56 E-value=1.3e-14 Score=107.72 Aligned_cols=119 Identities=16% Similarity=0.382 Sum_probs=85.4
Q ss_pred eEEEecCCCEEEEeEeCCCC--CceEEEEECC--cc---C------------------CC---------CCCCeEEeccC
Q psy3045 143 VQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KP---V------------------PD---------HNEPVFRIDSV 188 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~---~------------------~~---------~~~~~l~i~~~ 188 (267)
...+.+|+++.|.|.+.+.+ .+.+.|+|++ .. + .. .....|.|.++
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 34788999999999998766 6799999853 11 0 00 01237999999
Q ss_pred CCCCCeEEEEEEEcCCCCc-e--EEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEE
Q psy3045 189 RKEDKGMYQCVIRNEQESA-Q--ASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKK 261 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~~~-~--~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~ 261 (267)
+.+|+|.|.|.+.+..+.. . ....+.|.. ...+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|+++|..
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 167 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALS 167 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcc
Confidence 9999999999999875321 1 234555653 1245665544433346789999999999987 888 9999998863
No 374
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.56 E-value=3.6e-16 Score=115.62 Aligned_cols=157 Identities=15% Similarity=0.265 Sum_probs=93.0
Q ss_pred eeEEecCCCeEEEEEEecc--------eeeeecccCcceecc--c-cCCceEEEEeeEEEEeecccCCCeeEEEEEEcCC
Q psy3045 23 IRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKVA--V-PLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSV 91 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~--~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 91 (267)
....+.+|++++|.|.+.+ +.| ++......... . ....++ .....|.|.++...|+|.|+|.+.+..
T Consensus 12 ~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~~~~~~~~~~~~~~~~~g~~-~~~~~L~I~~~~~~D~g~Y~C~~~~~~ 89 (214)
T 1ow0_A 12 ALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCY-SVSSVLPGCAEPWNHGKTFTCTAAYPE 89 (214)
T ss_dssp CHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SSCSSCCCEECCCCCCSTTCC-CEEEECTTTHHHHHHTCEEEEEECCSS
T ss_pred ChHHhccCCCcEEEEEEeeeECCCCeEEEE-cCCCCCCcccCCceECCCCcE-EEEEEEEEeHHHcCCCCeEEEEEecCC
Confidence 5667899999999999865 789 53222111000 0 111222 245678999999999999999999876
Q ss_pred CccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CC-ceEEEE
Q psy3045 92 GGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PV-KTISWM 169 (267)
Q Consensus 92 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~ 169 (267)
+.......+.+ ......+.... ..+....+..|+.+.|.|.+.|. |. +.+.|+
T Consensus 90 ~~~~~~~~i~~---~~~~~~P~v~~----------------------~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 144 (214)
T 1ow0_A 90 SKTPLTATLSK---SGNTFRPEVHL----------------------LPPPSEELALNELVTLTCLARGFSPKDVLVRWL 144 (214)
T ss_dssp CSSCEEEEEEC---CSSCCCCEEEE----------------------ECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEE
T ss_pred CCCceeEeecc---CCCCCCCEEEe----------------------cCCCHHHhccCCceEEEEEEeeeECCCcEEEEE
Confidence 64332223321 01111111110 00111124568889999999985 53 599999
Q ss_pred ECCccCCCC-------------CCCeEE------eccCCCCCCeEEEEEEEcCCCC
Q psy3045 170 KDGKPVPDH-------------NEPVFR------IDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 170 ~~~~~~~~~-------------~~~~l~------i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
+||..+... ...++. +.....++.|.|+|.|.|....
T Consensus 145 k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 145 QGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp ETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred ECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 999876432 122222 2222223478999999997643
No 375
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.56 E-value=3.1e-14 Score=93.29 Aligned_cols=77 Identities=29% Similarity=0.530 Sum_probs=59.7
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|.......+
T Consensus 17 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 96 (108)
T 3kvq_A 17 LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFF 96 (108)
T ss_dssp CCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEE
T ss_pred CCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEE
Confidence 34458889999999999999999999999999887543 35789999999999999999999999998888888
Q ss_pred EEec
Q psy3045 214 KLGG 217 (267)
Q Consensus 214 ~v~~ 217 (267)
.|..
T Consensus 97 ~V~~ 100 (108)
T 3kvq_A 97 IIEG 100 (108)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8874
No 376
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.55 E-value=1.4e-14 Score=107.16 Aligned_cols=119 Identities=16% Similarity=0.292 Sum_probs=81.0
Q ss_pred EEEecCCCEEEEeEeCCC--CCceEEEEECCc--cCC-------------------------CCCCCeEEeccCCCCCCe
Q psy3045 144 QTIDFGRPAQFTCKYEGN--PVKTISWMKDGK--PVP-------------------------DHNEPVFRIDSVRKEDKG 194 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~--~~~-------------------------~~~~~~l~i~~~~~~d~g 194 (267)
..+.+|++++|.|.+.+. +.+.+.|++... ... ......|.|.+++.+|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTA 88 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCE
T ss_pred EEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCE
Confidence 478899999999998763 367899997431 100 012235999999999999
Q ss_pred EEEEEEEcCCCC----ceEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEECCEEc
Q psy3045 195 MYQCVIRNEQES----AQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYLDGKKL 262 (267)
Q Consensus 195 ~y~C~~~~~~~~----~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~l 262 (267)
.|.|.+.+..+. ......+.|. ....+|.+...+....+.+|+.+.|.|.+.+.+++ .+.|+++|..+
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 89 TYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp EEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 999999987542 2223445554 22345666543333356689999999999986543 57899999744
No 377
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.55 E-value=3.4e-14 Score=107.68 Aligned_cols=118 Identities=17% Similarity=0.295 Sum_probs=85.8
Q ss_pred CceEEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------C---------CCCCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------P---------DHNEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~---------~~~~~~l~i~~~ 188 (267)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+ . ......|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 3445788999999999998854 6799999821 110 0 011234999999
Q ss_pred CCCCCeEEEEEEEcCCCCc-eEEEEEEEec------------ccCCCeeecCCceeEEecCCcEEEEEEeecCCCC----
Q psy3045 189 RKEDKGMYQCVIRNEQESA-QASGELKLGG------------RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP---- 251 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~~~-~~~~~l~v~~------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---- 251 (267)
+.+|+|.|.|.+.+..+.. .....+.|.. ...+|.+...+....+.+|+++.|.|.+.+.+.+
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 167 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNS 167 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEE
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCc
Confidence 9999999999999865443 2344555552 1135666777777889999999999999998877
Q ss_pred cEEEEEC
Q psy3045 252 EISWYLD 258 (267)
Q Consensus 252 ~i~W~~~ 258 (267)
.+.|||+
T Consensus 168 ~v~W~r~ 174 (253)
T 3uzq_A 168 FMHWYQQ 174 (253)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 9999984
No 378
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.55 E-value=2.3e-14 Score=91.26 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=63.9
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccCCCC-------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPVPDH-------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+... ....|.|.++..+|+|.|+|.|.|..|....++
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 88 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIF 88 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEE
Confidence 44568899999999999999999999999999 776433 235799999999999999999999999877777
Q ss_pred EEEE
Q psy3045 212 ELKL 215 (267)
Q Consensus 212 ~l~v 215 (267)
.|.|
T Consensus 89 ~l~V 92 (93)
T 1wit_A 89 EVIV 92 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 379
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.55 E-value=6.3e-15 Score=109.40 Aligned_cols=115 Identities=19% Similarity=0.356 Sum_probs=83.5
Q ss_pred eEEEecCCCEEEEeEeCC-CCCc----eEEEEECCccCC---------------------------CCCCCeEEeccCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEG-NPVK----TISWMKDGKPVP---------------------------DHNEPVFRIDSVRK 190 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~-~p~~----~~~W~~~~~~~~---------------------------~~~~~~l~i~~~~~ 190 (267)
...+.+|+++.|.|.+.+ .+.+ .+.|++++.... ......|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 346778999999999854 3433 499999864221 11356899999999
Q ss_pred CCCeEEEEEEEcCC-CCceEEEEEEEecccCCCeeecCCceeEEecCCcE-EEEEEee-cCCCCcEEEEECCEE
Q psy3045 191 EDKGMYQCVIRNEQ-ESAQASGELKLGGRFDPPVIKESFSDETLNPGPNY-YFKCIAS-GNPTPEISWYLDGKK 261 (267)
Q Consensus 191 ~d~g~y~C~~~~~~-~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~i~W~~~~~~ 261 (267)
+|+|.|+|.+.+.. +.......|.|. .+|.+...+.... .+|+.+ .|.|.+. +.|.|.+.|++++..
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~---~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~ 157 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVL---AKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGG 157 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCC---CCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSC
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEE---ECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCC
Confidence 99999999999876 555556666654 4666654333322 578888 4999987 899999999987543
No 380
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.55 E-value=2.4e-14 Score=106.27 Aligned_cols=118 Identities=18% Similarity=0.317 Sum_probs=84.7
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC-------------------CC---------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV-------------------PD---------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~-------------------~~---------~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ .. .....|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (220)
T 2fbj_H 10 GLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE 89 (220)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred eEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh
Confidence 4788999999999998765 5789999853 110 00 11247999999999
Q ss_pred CCeEEEEEEEcCCCC---ceEEEEEEEecc-cCCCeeecCCceeEEecCCcEEEEEEeecC-CC--CcEEEEECCEEc
Q psy3045 192 DKGMYQCVIRNEQES---AQASGELKLGGR-FDPPVIKESFSDETLNPGPNYYFKCIASGN-PT--PEISWYLDGKKL 262 (267)
Q Consensus 192 d~g~y~C~~~~~~~~---~~~~~~l~v~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~i~W~~~~~~l 262 (267)
|+|.|.|.+.+..+. ......|.|... ..+|.+...+ ...+.+|+.+.|.|.+.+. |. +.+.|+++|..+
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 90 DTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp GCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred hCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 999999999986532 112345666531 2356665544 3345789999999999986 76 699999999764
No 381
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=7.6e-14 Score=91.74 Aligned_cols=82 Identities=27% Similarity=0.449 Sum_probs=68.4
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g 90 (110)
T 2dm2_A 11 FEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQG 90 (110)
T ss_dssp BSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTC
T ss_pred EEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCC
Confidence 3344556689999999999999999999999999998876421 12699999999999999999999999
Q ss_pred CceEEEEEEEecc
Q psy3045 206 SAQASGELKLGGR 218 (267)
Q Consensus 206 ~~~~~~~l~v~~~ 218 (267)
.......|.|...
T Consensus 91 ~~~~~~~l~V~~~ 103 (110)
T 2dm2_A 91 RISCTGRLMVQAV 103 (110)
T ss_dssp CEEECCCEEEECC
T ss_pred eEEEEEEEEEECC
Confidence 8887788888653
No 382
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.54 E-value=8.1e-15 Score=107.73 Aligned_cols=118 Identities=18% Similarity=0.331 Sum_probs=77.2
Q ss_pred ecCCCEEEEeEeCCCC----CceEEEEECCccCCCC--------CCCeEEec---cCCC---CCCeEEEEEEEcCCCCce
Q psy3045 147 DFGRPAQFTCKYEGNP----VKTISWMKDGKPVPDH--------NEPVFRID---SVRK---EDKGMYQCVIRNEQESAQ 208 (267)
Q Consensus 147 ~~g~~v~l~C~~~~~p----~~~~~W~~~~~~~~~~--------~~~~l~i~---~~~~---~d~g~y~C~~~~~~~~~~ 208 (267)
..|+.+.|.|.+.+.+ .+.+.|++++..+... ....+.+. .+.. +|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6799999999998865 3499999999765422 12233332 1333 349999999999877643
Q ss_pred EEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcCC
Q psy3045 209 ASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLVN 264 (267)
Q Consensus 209 ~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~~ 264 (267)
....+.+. ....+|.+...+.......|..+.|.|.+.|. |++ .|.|++||+.+..
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 154 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 154 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccC
Confidence 33333220 12346666554332222356679999999985 443 8999999998753
No 383
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.54 E-value=5e-14 Score=89.23 Aligned_cols=76 Identities=25% Similarity=0.530 Sum_probs=64.8
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCce-EEEEEEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ-ASGELKL 215 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~v 215 (267)
.+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.......|.|.++..+|+|.|+|.|.|..+... ....+.|
T Consensus 9 ~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp CCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence 344557889999999999999999999999999998888888999999999999999999999987543 2344544
No 384
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.53 E-value=2.8e-14 Score=108.59 Aligned_cols=121 Identities=16% Similarity=0.322 Sum_probs=84.0
Q ss_pred ceEEEecCCCEEEEeEeCCCC--CceEEEEECC--ccCC------------------C----------CCCCeEEeccCC
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPVP------------------D----------HNEPVFRIDSVR 189 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~~------------------~----------~~~~~l~i~~~~ 189 (267)
....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. . .....|.|.+++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 445788999999999998776 6789999863 2110 0 012479999999
Q ss_pred CCCCeEEEEEEEcCCCCc---eEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEc
Q psy3045 190 KEDKGMYQCVIRNEQESA---QASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKL 262 (267)
Q Consensus 190 ~~d~g~y~C~~~~~~~~~---~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l 262 (267)
.+|+|.|.|.+.+..+.. .....|.|.. ...+|.+........+.+|+.+.|.|.+.+. |.+ .|.|+++|..+
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 999999999999864211 1223566653 1234555543322346789999999999985 766 99999998765
No 385
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=5.2e-14 Score=93.59 Aligned_cols=90 Identities=19% Similarity=0.148 Sum_probs=67.0
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc--------eeeeecccCcce---eccccCCceE----EEEeeEEEEeeccc
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE--------NMWFKFIEGSSR---KVAVPLNDRV----KQVSGTLIIKEAKV 77 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~---~~~~~~~~~~----~~~~~~l~i~~~~~ 77 (267)
.|.|...| .++.+.+|++++|.|.+.+ |.|+|+..-... ...+.+...+ .....+|+|.+++.
T Consensus 7 ~~~F~~~P--~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 84 (126)
T 2dav_A 7 GILFIEKP--QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD 84 (126)
T ss_dssp SCSCCSCC--CCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT
T ss_pred ccEEEEcC--CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc
Confidence 47888888 8999999999999999853 999995210000 0001111011 11257899999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEe
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
.|+|.|+|.+.|..+..+..+.|+|..
T Consensus 85 ~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 85 NFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp TSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred ccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999998899999999987
No 386
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.53 E-value=3.1e-14 Score=107.91 Aligned_cols=123 Identities=17% Similarity=0.378 Sum_probs=83.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC--ccC------------------------C-CCCCCeEEeccCCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG--KPV------------------------P-DHNEPVFRIDSVRKEDK 193 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~~------------------------~-~~~~~~l~i~~~~~~d~ 193 (267)
+....+.+|++++|.|.+.+.+.+.+.|+|.. ... . ..... |.|.+++.+|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~Ds 86 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQG 86 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSC
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhC
Confidence 34558889999999999888888899999821 110 0 00112 99999999999
Q ss_pred eEEEEEEEcCCC---C---ceEEEEEEEec---ccCCCeeecC-CceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEE
Q psy3045 194 GMYQCVIRNEQE---S---AQASGELKLGG---RFDPPVIKES-FSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKK 261 (267)
Q Consensus 194 g~y~C~~~~~~~---~---~~~~~~l~v~~---~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~ 261 (267)
|.|.|.+.+..+ . ......+.+.. ...+|.+... +....+..|+.+.|.|.+.| .|++ .+.|+++|+.
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~ 166 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEE
Confidence 999999986543 1 11123455542 1234554432 22223345789999999998 5666 8999999998
Q ss_pred cCC
Q psy3045 262 LVN 264 (267)
Q Consensus 262 l~~ 264 (267)
+..
T Consensus 167 l~~ 169 (253)
T 3to4_D 167 VHS 169 (253)
T ss_dssp ECT
T ss_pred CCC
Confidence 864
No 387
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.8e-14 Score=93.22 Aligned_cols=91 Identities=18% Similarity=0.143 Sum_probs=66.6
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc--------eeeeecccCcce---eccccC----CceEEEEeeEEEEeeccc
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE--------NMWFKFIEGSSR---KVAVPL----NDRVKQVSGTLIIKEAKV 77 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~---~~~~~~----~~~~~~~~~~l~i~~~~~ 77 (267)
++.|...| .++.+.+|++++|.|.+.+ |.|+|+...... ...+.+ .........+|+|.+++.
T Consensus 12 ~~~f~~~P--~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 12 TGVFLKKP--DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp SSSCSBCC--CCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred cceEEECC--CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 45777777 8999999999999999853 999996211100 000111 111112357899999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEec
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
.|+|.|+|.+.|..|..+..+.|.|..+
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999999999988763
No 388
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.52 E-value=1.3e-13 Score=104.41 Aligned_cols=124 Identities=17% Similarity=0.378 Sum_probs=86.1
Q ss_pred CCceEEEecCCCEEEEeEeCCCCCceEEEEECCc--c-----------------CC--------CCCCCeEEeccCCCCC
Q psy3045 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGK--P-----------------VP--------DHNEPVFRIDSVRKED 192 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~--~-----------------~~--------~~~~~~l~i~~~~~~d 192 (267)
.+....+.+|+++.|.|.+. .+.+.+.|+++.. . .. ......|.|.+++.+|
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp SCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred cCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 34556889999999999985 4577999998531 1 00 0123579999999999
Q ss_pred CeEEEEEEEcCC---CCceEEEEEEEecc---cCCCeeecC-CceeEEecCCcEEEEEEeecC-CCC-cEEEEECCEEcC
Q psy3045 193 KGMYQCVIRNEQ---ESAQASGELKLGGR---FDPPVIKES-FSDETLNPGPNYYFKCIASGN-PTP-EISWYLDGKKLV 263 (267)
Q Consensus 193 ~g~y~C~~~~~~---~~~~~~~~l~v~~~---~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~l~ 263 (267)
+|.|.|.+.+.. ........+.|... ..+|.+... +....+.+|+.+.|.|.+.|. |.+ .+.|++||+.+.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 999999999862 11112234555431 246666543 333345578999999999985 654 999999999876
Q ss_pred C
Q psy3045 264 N 264 (267)
Q Consensus 264 ~ 264 (267)
.
T Consensus 168 ~ 168 (252)
T 1oga_E 168 S 168 (252)
T ss_dssp S
T ss_pred C
Confidence 4
No 389
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.52 E-value=1.4e-13 Score=101.85 Aligned_cols=118 Identities=17% Similarity=0.340 Sum_probs=82.9
Q ss_pred ceEEEecCCCEEEEeEeCCCCCc---eEEEEECCccCC--------------------------------CCCCCeEEec
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVK---TISWMKDGKPVP--------------------------------DHNEPVFRID 186 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~---~~~W~~~~~~~~--------------------------------~~~~~~l~i~ 186 (267)
....+..|++++|.|.+.+.+.+ .+.|+|++..+. .....+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 34578889999999999887654 489999764321 0123579999
Q ss_pred cCCCCCCeEEEEEEEcCCCCceEEE-EEEEecccCCCeeecCCceeEEecCCcEEEEEEee-cCCCCcEEEEECCEEc
Q psy3045 187 SVRKEDKGMYQCVIRNEQESAQASG-ELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKL 262 (267)
Q Consensus 187 ~~~~~d~g~y~C~~~~~~~~~~~~~-~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~l 262 (267)
+++.+|+|.|.|.+.+..+...... .+.+. .+|.....+.......++...+.|.+. +.|++.+.|++++..+
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~ 163 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVI---AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGE 163 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEE---BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeee---cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccc
Confidence 9999999999999998766544433 23332 345444444444556677777777664 6788899999987654
No 390
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=104.79 Aligned_cols=116 Identities=20% Similarity=0.345 Sum_probs=80.9
Q ss_pred ceEEEecCCCEEEEeEeCCC--CCceEEEEECC--ccCC------------C---------CCCCeEEeccCCCCCCeEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG--KPVP------------D---------HNEPVFRIDSVRKEDKGMY 196 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~~~------------~---------~~~~~l~i~~~~~~d~g~y 196 (267)
....+.+|++++|.|.+.+. +.+.+.|+|+. .... . .....|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 34588999999999999876 77899999853 1110 0 0123699999999999999
Q ss_pred EEEEEcCCCCc---eEEEEEEEecccC------------------CCeeecCCceeEEecCCcEEEEEEeecCC--CCcE
Q psy3045 197 QCVIRNEQESA---QASGELKLGGRFD------------------PPVIKESFSDETLNPGPNYYFKCIASGNP--TPEI 253 (267)
Q Consensus 197 ~C~~~~~~~~~---~~~~~l~v~~~~~------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i 253 (267)
.|.+.+..+.. .....|.|..... ++.+... ....+.+|+.++|.|.+.+.+ .+.+
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v 168 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES-GGGLVQPGGSLRLSCAASGFTFSSYAM 168 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEE-CCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC-CCeEEcCCCeEEEEEEEeCCcccccEE
Confidence 99999865321 1234555543211 1133333 334588999999999999877 6799
Q ss_pred EEEEC
Q psy3045 254 SWYLD 258 (267)
Q Consensus 254 ~W~~~ 258 (267)
.|||+
T Consensus 169 ~W~r~ 173 (256)
T 3ux9_B 169 SWVRQ 173 (256)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 391
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=5.3e-14 Score=90.59 Aligned_cols=76 Identities=21% Similarity=0.257 Sum_probs=65.1
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|....+
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1g1c_A 12 IQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSH 91 (99)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEE
Confidence 445588999999999999999999999999998876432 2369999999999999999999999888877
Q ss_pred EEEEEe
Q psy3045 211 GELKLG 216 (267)
Q Consensus 211 ~~l~v~ 216 (267)
..|.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1g1c_A 92 AFLLVQ 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777765
No 392
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.52 E-value=5.6e-14 Score=89.40 Aligned_cols=87 Identities=22% Similarity=0.237 Sum_probs=65.5
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
.+|.|...+ ....+.+|+.+.|.|.+.+ +.|++++.+...... ...........|.|.++..+|+|.|+|.
T Consensus 1 ~~P~i~~~~--~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 1 LKPKILTAS--RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCCEECCCC--CEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCCeEEcCC--CceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEE
Confidence 368887766 7899999999999999998 999996411221111 1111112346799999999999999999
Q ss_pred EEcCCCccEEEEEEEE
Q psy3045 87 VNNSVGGESVETVLTV 102 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V 102 (267)
|.|..|..+..+.|.|
T Consensus 77 a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 77 VKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEE
Confidence 9999998877777766
No 393
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.51 E-value=1.6e-13 Score=104.64 Aligned_cols=117 Identities=20% Similarity=0.315 Sum_probs=82.3
Q ss_pred CceEEEecCCCEEEEeEeCCCC------CceEEEEECC--ccCC-------------C--------CCCCeEEeccCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP------VKTISWMKDG--KPVP-------------D--------HNEPVFRIDSVRKE 191 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p------~~~~~W~~~~--~~~~-------------~--------~~~~~l~i~~~~~~ 191 (267)
+....+.+|++++|.|.+.+.+ .+.+.|+++. ..+. . .....|.|.++..+
T Consensus 12 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 91 (264)
T 2gjj_A 12 PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAE 91 (264)
T ss_dssp CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHH
Confidence 4556889999999999998887 6799999852 2210 0 11247999999999
Q ss_pred CCeEEEEEEEcCCCC-ceEEEEEEEecccC---------------CC--eeecCCceeEEecCCcEEEEEEeecCCC--C
Q psy3045 192 DKGMYQCVIRNEQES-AQASGELKLGGRFD---------------PP--VIKESFSDETLNPGPNYYFKCIASGNPT--P 251 (267)
Q Consensus 192 d~g~y~C~~~~~~~~-~~~~~~l~v~~~~~---------------~p--~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~ 251 (267)
|+|.|.|.+.+..+. ......|.|..... +| .+...+ ...+.+|++++|.|.+.+.+. +
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~G~~v~L~C~~~~~~~~~~ 170 (264)
T 2gjj_A 92 DLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSG-PEVVKTGASVKISCKASGYSFTGY 170 (264)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECC-CEEECTTCCEEEEEEEESSCGGGS
T ss_pred HCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCC-CEEEcCCCcEEEEEEEeCCccCCe
Confidence 999999999986532 11234556653210 12 222223 347889999999999998874 7
Q ss_pred cEEEEEC
Q psy3045 252 EISWYLD 258 (267)
Q Consensus 252 ~i~W~~~ 258 (267)
.+.|||+
T Consensus 171 ~v~W~r~ 177 (264)
T 2gjj_A 171 FINWVKK 177 (264)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999986
No 394
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.51 E-value=7.3e-14 Score=90.12 Aligned_cols=76 Identities=29% Similarity=0.502 Sum_probs=64.8
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC----------CeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE----------PVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~----------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..|....+
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 4455888999999999999999999999999987754321 379999999999999999999999888777
Q ss_pred EEEEEe
Q psy3045 211 GELKLG 216 (267)
Q Consensus 211 ~~l~v~ 216 (267)
+.|.|.
T Consensus 92 ~~l~V~ 97 (100)
T 2kdg_A 92 VQLDVL 97 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777775
No 395
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.51 E-value=7.8e-14 Score=92.56 Aligned_cols=91 Identities=29% Similarity=0.311 Sum_probs=71.4
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE-----eeEEEEeecccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV-----SGTLIIKEAKVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d 79 (267)
...+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++..... ...++... ..+|.|.+++.+|
T Consensus 12 ~~~~p~f~~~p--~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D 84 (116)
T 2kkq_A 12 HKRAPMFIYKP--QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQF-----NTDRISLYQDNTGRVTLLIKDVNKKD 84 (116)
T ss_dssp CCBCCCBSSCC--CCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCC-----CBTTEEEEECTTCEEEEEEEEECGGG
T ss_pred CCCCCeEEeCC--CcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcC-----CCCeEEEEeCCCCeEEEEECCCCccc
Confidence 45679999888 7899999999999999987 999996322110 12233221 2289999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
+|.|+|.+.|..|.....+.|.|...+.
T Consensus 85 ~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 85 AGWYTVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCSC
T ss_pred CEEEEEEEEcCCCeEEEEEEEEEeCCCC
Confidence 9999999999999888888898887654
No 396
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.51 E-value=1e-13 Score=103.63 Aligned_cols=120 Identities=17% Similarity=0.297 Sum_probs=79.1
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECC--ccC------------------CC---------CCCCeEEeccCCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPV------------------PD---------HNEPVFRIDSVRKED 192 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~------------------~~---------~~~~~l~i~~~~~~d 192 (267)
..+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ .. .....|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 3788899999999988764 5789999853 211 00 012379999999999
Q ss_pred CeEEEEEEEcCCC--C----ceEEEEEEEec-ccCCCeeecCCceeEEecC-CcEEEEEEeecC-CCC-cEEEEE-CCEE
Q psy3045 193 KGMYQCVIRNEQE--S----AQASGELKLGG-RFDPPVIKESFSDETLNPG-PNYYFKCIASGN-PTP-EISWYL-DGKK 261 (267)
Q Consensus 193 ~g~y~C~~~~~~~--~----~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~i~W~~-~~~~ 261 (267)
+|.|.|.+.+..+ . ......|.|.. ...+|.+........+..| +.+.|.|.+.+. |.+ .+.|++ ||+.
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSD 169 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCE
T ss_pred CEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCc
Confidence 9999999984221 1 11234566654 2234655532222234578 999999999986 776 999999 9987
Q ss_pred cC
Q psy3045 262 LV 263 (267)
Q Consensus 262 l~ 263 (267)
+.
T Consensus 170 l~ 171 (232)
T 1dn0_B 170 IS 171 (232)
T ss_dssp EC
T ss_pred ee
Confidence 64
No 397
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.51 E-value=1e-13 Score=88.57 Aligned_cols=84 Identities=15% Similarity=0.262 Sum_probs=68.4
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
..||.|...+ ....+.+|+++.|.|.+.+ +.|++++.. +....++...+..|.|.+++.+|+|.|+|.
T Consensus 7 ~~pp~~~~~~--~~~~v~~G~~v~l~C~~~g~pp~i~W~k~g~~------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 7 AQPWGVPVEV--ESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQ------LVESNRTRITGEEVEVRDSIPADSGLYACV 78 (95)
T ss_dssp SCSCCBTTBB--CCEEECTTSCEEEECCEESSCCEEEEEBTTBC------CCCCSSEEECSSEEEESSCCGGGSEEEEEE
T ss_pred CCCCEEEcCc--ceEEEcCCCeEEEEEECCCCCCceEEEECCEe------cCCCCCEEEeCCEEEECCCChHHCEEEEEE
Confidence 4578888777 7899999999999999988 999996332 222345555577999999999999999999
Q ss_pred EEcCCCccEEEEEEEE
Q psy3045 87 VNNSVGGESVETVLTV 102 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V 102 (267)
+.|..|.....+.|.|
T Consensus 79 a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred eccCCCcEEEEEEEEE
Confidence 9999988777777765
No 398
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=88.90 Aligned_cols=78 Identities=29% Similarity=0.582 Sum_probs=66.8
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCC-------CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD-------HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
..+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.++..+|+|.|+|.|.|..+.....+
T Consensus 13 ~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 92 (100)
T 2edj_A 13 QGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSA 92 (100)
T ss_dssp ECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCE
T ss_pred eCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEE
Confidence 345566888999999999999999999999999987752 2346799999999999999999999998888788
Q ss_pred EEEEe
Q psy3045 212 ELKLG 216 (267)
Q Consensus 212 ~l~v~ 216 (267)
.|.|.
T Consensus 93 ~l~V~ 97 (100)
T 2edj_A 93 VLDVT 97 (100)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88775
No 399
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.51 E-value=6.6e-14 Score=103.90 Aligned_cols=118 Identities=20% Similarity=0.479 Sum_probs=82.2
Q ss_pred eEEEecCCCEEEEeEeCCCC--CceEEEEECCcc--CC------C------------------------CCCCeEEeccC
Q psy3045 143 VQTIDFGRPAQFTCKYEGNP--VKTISWMKDGKP--VP------D------------------------HNEPVFRIDSV 188 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~~~--~~------~------------------------~~~~~l~i~~~ 188 (267)
...+.+|++++|.|.+.+.+ .+.+.|++.... .. . .....|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 34788999999999988753 679999974311 00 0 01235999999
Q ss_pred CCCCCeEEEEEEEcCC--CCceEEEEEEEe-cccCCCeee-cCCceeEEecCCcEEEEEEeec-CCC-C-cEEEEECCEE
Q psy3045 189 RKEDKGMYQCVIRNEQ--ESAQASGELKLG-GRFDPPVIK-ESFSDETLNPGPNYYFKCIASG-NPT-P-EISWYLDGKK 261 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~--~~~~~~~~l~v~-~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~-~-~i~W~~~~~~ 261 (267)
+.+|+|.|.|.+.+.. ........+.|. ....+|.+. ..+.. . .+|+.+.|.|.+.+ .|. + .+.|+++|+.
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~-~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~ 166 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCS-T-QPDGNVVIACLVQGFFPQEPLSVTWSESGQG 166 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCS-C-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTT
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcc-c-ccCCCEEEEEEEEeeECCCCEEEEEEECCEE
Confidence 9999999999999864 122233455664 223456555 22322 2 68999999999998 665 4 8999999976
Q ss_pred c
Q psy3045 262 L 262 (267)
Q Consensus 262 l 262 (267)
+
T Consensus 167 ~ 167 (221)
T 3m8o_H 167 V 167 (221)
T ss_dssp C
T ss_pred C
Confidence 6
No 400
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.51 E-value=8.6e-15 Score=112.40 Aligned_cols=158 Identities=11% Similarity=0.180 Sum_probs=45.5
Q ss_pred EecCCCeEEEEEEecc--------eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCc----
Q psy3045 26 KKPGGESFALLCEAQE--------NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGG---- 93 (267)
Q Consensus 26 ~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---- 93 (267)
.+.+|+.++|.|.+.+ +.|+|++....... .... ..+..|.+......|.+.|+|+|.+..+.
T Consensus 97 ~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~--~~~~---~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~ 171 (291)
T 1mq8_A 97 WQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP--AVGE---PAEVTTTVLVRRDHHGANFSCRTELDLRPQGLE 171 (291)
T ss_dssp BCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE--CCBT---TEEEEEECCCSSSCSSCEEEEEEEEECGGGTSC
T ss_pred cccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc--CCCC---CceEEEEeeeeeccCCceEEEEEEecCCccCCc
Confidence 4889999999999998 79999643221111 1111 12345666666555666999999987552
Q ss_pred ----cEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCc---eE
Q psy3045 94 ----ESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVK---TI 166 (267)
Q Consensus 94 ----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~---~~ 166 (267)
.+....|.|..+|...... ..+ ..+.+|+.+.|.|.+.|.+++ .+
T Consensus 172 l~~~~s~~~~L~V~~~P~~~~~~--------------------------~~p--~~l~eG~~v~l~C~~~g~~P~~~~~v 223 (291)
T 1mq8_A 172 LFENTSAPYQLQTFVLPATPPQL--------------------------VSP--RVLEVDTQGTVVCSLDGLFPVSEAQV 223 (291)
T ss_dssp EEEECCCCEECBC-------------------------------------------------------------------
T ss_pred cccccccceEEEEEecCCCCcee--------------------------cCC--cCccCCCeEEEEEEcCCCCCCcccEE
Confidence 1333455555443211110 001 156789999999999987543 69
Q ss_pred EEEECCccCCCC---CCCeEEeccC---CCC--CCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 167 SWMKDGKPVPDH---NEPVFRIDSV---RKE--DKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 167 ~W~~~~~~~~~~---~~~~l~i~~~---~~~--d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
.|+++|..+... .+..+.+... ..+ +.+.|+|.+.+..........+.|.
T Consensus 224 ~w~~~g~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~ 281 (291)
T 1mq8_A 224 HLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY 281 (291)
T ss_dssp ----------------------------------------------------------
T ss_pred EEEECCEecCceeeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEE
Confidence 999999887632 2233333322 233 3567789998765555556666664
No 401
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.50 E-value=4.3e-13 Score=87.75 Aligned_cols=86 Identities=19% Similarity=0.145 Sum_probs=65.6
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc--------eeeeecccCcceeccccCCceEE----------EEeeEEEEee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE--------NMWFKFIEGSSRKVAVPLNDRVK----------QVSGTLIIKE 74 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~--------~~W~~~~~~~~~~~~~~~~~~~~----------~~~~~l~i~~ 74 (267)
.|.|...| .++.+.+|++++|.|.+.+ +.|+|++. .........++. ....+|.|.+
T Consensus 4 ~p~f~~~p--~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 78 (108)
T 3cx2_A 4 IGLFVMRP--QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKW---VDLSSKVGQHLQLHDSYDRASKVYLFELHITD 78 (108)
T ss_dssp CCSCSBCC--CCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTT---EEGGGGCBTTEEEEEEEETTTTEEEEEEEECS
T ss_pred ccEEEeCC--CcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCc---ccccccCCceEEEeeEEecccccceEEEEEec
Confidence 47888887 7899999999999999975 88999531 101101111222 1256899999
Q ss_pred cccCCCeeEEEEEEcCCCccEEEEEEEEE
Q psy3045 75 AKVEDSGKYLCVVNNSVGGESVETVLTVT 103 (267)
Q Consensus 75 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 103 (267)
++.+|+|.|+|.+.|..|..+..+.|.|.
T Consensus 79 v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 79 AQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999998888888875
No 402
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.50 E-value=1.9e-13 Score=87.24 Aligned_cols=80 Identities=19% Similarity=0.392 Sum_probs=65.9
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-----CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
..+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|....
T Consensus 10 p~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 88 (95)
T 2ckn_A 10 WGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTT 88 (95)
T ss_dssp CCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEE
T ss_pred CEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEE
Confidence 3344455667899999999999999887 799999999887643 2468999999999999999999999887776
Q ss_pred EEEEEE
Q psy3045 210 SGELKL 215 (267)
Q Consensus 210 ~~~l~v 215 (267)
.+.+.|
T Consensus 89 ~~~l~V 94 (95)
T 2ckn_A 89 YFSVNV 94 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666655
No 403
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=91.41 Aligned_cols=84 Identities=18% Similarity=0.298 Sum_probs=69.8
Q ss_pred CcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEc
Q psy3045 134 PLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 134 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 94 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVN 94 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 3445556667799999999999999999999999999998875321 12799999999999999999999
Q ss_pred CCCCceEEEEEEEec
Q psy3045 203 EQESAQASGELKLGG 217 (267)
Q Consensus 203 ~~~~~~~~~~l~v~~ 217 (267)
..|.....+.|.|..
T Consensus 95 ~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 95 EAGVTTCNTRLDVTA 109 (116)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEeC
Confidence 998887788887764
No 404
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3e-14 Score=91.24 Aligned_cols=77 Identities=31% Similarity=0.633 Sum_probs=64.2
Q ss_pred cCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 139 ~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......|.|.++..+|+|.|+|.+.|..+....+..+.+
T Consensus 15 ~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v 91 (96)
T 2ens_A 15 VEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91 (96)
T ss_dssp EESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEE
T ss_pred ECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEE
Confidence 33444578899999999999999989999999999998888899999999999999999999997655444443443
No 405
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=6e-14 Score=90.36 Aligned_cols=92 Identities=27% Similarity=0.333 Sum_probs=70.2
Q ss_pred CCCcccccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccC
Q psy3045 4 SDLKPVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVE 78 (267)
Q Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 78 (267)
.+.......||.|...+ ....+.+|+++.|.|.+.+ +.|++++..... ...........|.|.++..+
T Consensus 2 ss~~~~~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~-----~~~~~~~~~~~L~i~~v~~~ 74 (99)
T 2yr3_A 2 SSGSSGMEVAPSFSSVL--KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQY-----ARSTCEAGVAELHIQDALPE 74 (99)
T ss_dssp CCCCSCCCEEEEEEECC--CCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSS-----CCCEEETTEEEEEECSCCTT
T ss_pred CCccCCcccCCceeecC--CCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcc-----cceEeeCCeEEEEECCCChh
Confidence 34555566789998887 7889999999999999987 999996432211 11122223468999999999
Q ss_pred CCeeEEEEEEcCCCccEEEEEEEE
Q psy3045 79 DSGKYLCVVNNSVGGESVETVLTV 102 (267)
Q Consensus 79 d~G~Y~C~~~~~~~~~~~~~~l~V 102 (267)
|+|.|+|.+.|..|.....+.|.|
T Consensus 75 D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 75 DHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp CCBCEEEEEECSSCEEEEECCEEE
T ss_pred hCEEEEEEEEECCCeEEEEEEEEE
Confidence 999999999999998777766665
No 406
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.50 E-value=8.6e-14 Score=89.60 Aligned_cols=76 Identities=24% Similarity=0.473 Sum_probs=64.3
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC----------CeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE----------PVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~----------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..|....+
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCE 91 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEE
Confidence 3445788999999999999999999999999988764321 269999999999999999999999888777
Q ss_pred EEEEEe
Q psy3045 211 GELKLG 216 (267)
Q Consensus 211 ~~l~v~ 216 (267)
..|.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1u2h_A 92 ARLEVR 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777765
No 407
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.49 E-value=2.2e-15 Score=111.37 Aligned_cols=123 Identities=17% Similarity=0.280 Sum_probs=83.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCC---ceEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPV---KTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~---~~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
+....+.+|+.++|.|.+.+.++ +.+.| ++..+... ....|.|..+..+|+|.|.|.+.|.
T Consensus 11 P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~~ 88 (214)
T 1ow0_A 11 PALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYP 88 (214)
T ss_dssp CCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECCS
T ss_pred cChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEecC
Confidence 44446778999999999998754 68999 44443210 1124666667778999999999998
Q ss_pred CCCceEEEEEEEecccCCCeeecCC-ceeEEecCCcEEEEEEeecC-CC-CcEEEEECCEEcCCC
Q psy3045 204 QESAQASGELKLGGRFDPPVIKESF-SDETLNPGPNYYFKCIASGN-PT-PEISWYLDGKKLVNA 265 (267)
Q Consensus 204 ~~~~~~~~~l~v~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~l~~~ 265 (267)
.+.......+.......+|.+...+ ....+..|..+.|.|.+.|+ |+ +.|.|+|||+.+..+
T Consensus 89 ~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 153 (214)
T 1ow0_A 89 ESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 153 (214)
T ss_dssp SCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGG
T ss_pred CCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCC
Confidence 7654433333321223567665433 22235678899999999985 43 499999999987643
No 408
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=1.7e-13 Score=89.77 Aligned_cols=82 Identities=13% Similarity=0.212 Sum_probs=64.9
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCCCC---ceEEEEECCccCCC------------------CCCCeEEeccCCCCCC
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGNPV---KTISWMKDGKPVPD------------------HNEPVFRIDSVRKEDK 193 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~---~~~~W~~~~~~~~~------------------~~~~~l~i~~~~~~d~ 193 (267)
+.+...+....+.+|++++|.|.+.|.|. +.+.|+|++..... .....|.|.+++.+|+
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 84 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFT 84 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGC
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccC
Confidence 44455566778999999999999999887 99999997621100 0135799999999999
Q ss_pred eEEEEEEEcCCCCceEEEEEEEe
Q psy3045 194 GMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 194 g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
|.|+|.|.|..|....++.|.|.
T Consensus 85 G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 85 GSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999988888887764
No 409
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.49 E-value=4.3e-14 Score=107.19 Aligned_cols=119 Identities=16% Similarity=0.329 Sum_probs=76.7
Q ss_pred EEEecCCCEEEEeEeCCCC--CceEEEEECCc--cC-------------------CC---------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGNP--VKTISWMKDGK--PV-------------------PD---------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~~--~~-------------------~~---------~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+.+ .+.+.|+++.. .+ .. .....|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 10 GLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp EEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 4788999999999998765 67899998531 11 00 11247999999999
Q ss_pred CCeEEEEEEEcCCCC---------c----eEEEEEEEec-ccCCCeeecCCceeEEecCCcEEEEEEeecC-CCC-cEEE
Q psy3045 192 DKGMYQCVIRNEQES---------A----QASGELKLGG-RFDPPVIKESFSDETLNPGPNYYFKCIASGN-PTP-EISW 255 (267)
Q Consensus 192 d~g~y~C~~~~~~~~---------~----~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W 255 (267)
|+|.|.|.+.+..+. . .....|.|.. ...+|.+........+.+|+.+.|.|.+.|. |.| .|.|
T Consensus 90 DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~W 169 (257)
T 3bn9_D 90 DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 169 (257)
T ss_dssp GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEEEE
T ss_pred hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEEE
Confidence 999999999987541 1 1223566653 2235666544333346789999999999986 777 9999
Q ss_pred EECCEEc
Q psy3045 256 YLDGKKL 262 (267)
Q Consensus 256 ~~~~~~l 262 (267)
+++|..+
T Consensus 170 ~k~g~~~ 176 (257)
T 3bn9_D 170 NSGALTS 176 (257)
T ss_dssp TTTTCCS
T ss_pred eeCCCcC
Confidence 9999764
No 410
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.3e-13 Score=90.63 Aligned_cols=92 Identities=23% Similarity=0.324 Sum_probs=72.1
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE-EEeeEEEEeecccCCCeeE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK-QVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y 83 (267)
...||.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ....++. ..+++|.|.+++.+|+|.|
T Consensus 5 ~~~pP~i~~~p--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~-----~~~~~~~~~~~~~L~i~~v~~~D~G~Y 77 (118)
T 2eo9_A 5 SSGPPVIRQGP--VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVS-----TQDSRIKQLENGVLQIRYAKLGDTGRY 77 (118)
T ss_dssp CCCSCCCSBCC--CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCC-----TTSTTEEEEETTEEEEESCCGGGCCCE
T ss_pred CCCCCEEEcCC--CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECc-----CCCCeEEEccCCEEEEccCCcCCCEEE
Confidence 34578898877 7899999999999999987 99999633211 1122332 3456899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEecccc
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLAA 108 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~~ 108 (267)
+|.+.|..|.....+.|.|...+.+
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 78 TCIASTPSGEATWSAYIEVQEFGVP 102 (118)
T ss_dssp EEEEECSSCEEEEECCEEEECCSCC
T ss_pred EEEEEcCCCcEEEEEEEEEEeCCCC
Confidence 9999999998888888888876543
No 411
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.49 E-value=9.6e-14 Score=90.08 Aligned_cols=77 Identities=18% Similarity=0.398 Sum_probs=66.0
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|......
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 94 (103)
T 3qp3_A 15 MRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYA 94 (103)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEE
Confidence 345588899999999999999999999999998876542 24699999999999999999999999888888
Q ss_pred EEEEec
Q psy3045 212 ELKLGG 217 (267)
Q Consensus 212 ~l~v~~ 217 (267)
.|.|..
T Consensus 95 ~l~V~~ 100 (103)
T 3qp3_A 95 TLDVTG 100 (103)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 887753
No 412
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.49 E-value=5.9e-14 Score=107.22 Aligned_cols=159 Identities=19% Similarity=0.335 Sum_probs=94.5
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceec-------------cccCCceEEEE------eeEEEEeecc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-------------AVPLNDRVKQV------SGTLIIKEAK 76 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-------------~~~~~~~~~~~------~~~l~i~~~~ 76 (267)
..+.+.+|++|+|.|.+.+ +.|++...+..... ......|+... +.+|.|.+++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 3578999999999999853 99998643321111 11123455432 2469999999
Q ss_pred cCCCeeEEEEEEcCC------C-----------cc-E-------EEEEEEEEeccccccCCceEEEeCCCceEEEEEeec
Q psy3045 77 VEDSGKYLCVVNNSV------G-----------GE-S-------VETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEI 131 (267)
Q Consensus 77 ~~d~G~Y~C~~~~~~------~-----------~~-~-------~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 131 (267)
.+|+|.|+|.+.+.. + .. . ..+.|.|... ....+.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~--~~~~P~------------------ 170 (267)
T 3u1s_H 111 ADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSA--STKGPS------------------ 170 (267)
T ss_dssp GGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCC--CCBCCE------------------
T ss_pred hhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCC--CCCCCE------------------
Confidence 999999999996210 0 00 0 0122333210 001111
Q ss_pred CCCcccccCCceEEEecCCCEEEEeEeCCC-C-CceEEEEECCccCCCC----------C-----CCeEEeccCCCCCCe
Q psy3045 132 SPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-P-VKTISWMKDGKPVPDH----------N-----EPVFRIDSVRKEDKG 194 (267)
Q Consensus 132 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~~~~~----------~-----~~~l~i~~~~~~d~g 194 (267)
.....+.. ....|+.++|.|.+.+. | .+.+.| ++..+... + .+.|.+.....+| +
T Consensus 171 ----v~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~ 242 (267)
T 3u1s_H 171 ----VFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-Q 242 (267)
T ss_dssp ----EEEECCCG-GGEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-C
T ss_pred ----EEEecCCc-ccCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-C
Confidence 11011111 22468999999998874 5 568999 66554321 1 1357777777778 9
Q ss_pred EEEEEEEcCCCCceE
Q psy3045 195 MYQCVIRNEQESAQA 209 (267)
Q Consensus 195 ~y~C~~~~~~~~~~~ 209 (267)
.|+|.+.|.......
T Consensus 243 ~ytC~v~h~~~~~~~ 257 (267)
T 3u1s_H 243 TYICNVNHKPSNTKV 257 (267)
T ss_dssp CCEEEEEEGGGTEEE
T ss_pred EEEEEEEECCCCcce
Confidence 999999998754433
No 413
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=3.8e-14 Score=93.17 Aligned_cols=81 Identities=30% Similarity=0.521 Sum_probs=68.4
Q ss_pred ccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 138 GVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 138 ~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+..
T Consensus 13 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 92 (110)
T 2dm3_A 13 LQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQN 92 (110)
T ss_dssp EECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEE
T ss_pred EeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEE
Confidence 344556689999999999999999999999999998876432 2479999999999999999999999988
Q ss_pred eEEEEEEEecc
Q psy3045 208 QASGELKLGGR 218 (267)
Q Consensus 208 ~~~~~l~v~~~ 218 (267)
..++.|.|...
T Consensus 93 ~~~~~l~V~~~ 103 (110)
T 2dm3_A 93 SFSLELVVAAK 103 (110)
T ss_dssp EECCEEEEECC
T ss_pred EEEEEEEEeCC
Confidence 77888888753
No 414
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=8.1e-14 Score=89.74 Aligned_cols=75 Identities=23% Similarity=0.455 Sum_probs=63.5
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 18 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 97 (99)
T 2yr3_A 18 LKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97 (99)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEE
T ss_pred CCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 344578899999999999999999999999998876432 35799999999999999999999998877666665
Q ss_pred E
Q psy3045 215 L 215 (267)
Q Consensus 215 v 215 (267)
|
T Consensus 98 V 98 (99)
T 2yr3_A 98 V 98 (99)
T ss_dssp E
T ss_pred E
Confidence 5
No 415
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.49 E-value=3.8e-13 Score=86.19 Aligned_cols=77 Identities=18% Similarity=0.405 Sum_probs=65.5
Q ss_pred CceEEEecCCCEEEEeEeCCC-CCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN-PVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~-p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
+....+.+|+.+.|.|.+.+. |.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..|....+
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 87 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSY 87 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEE
Confidence 445688999999999999997 8899999999987764321 379999999999999999999999988888
Q ss_pred EEEEEec
Q psy3045 211 GELKLGG 217 (267)
Q Consensus 211 ~~l~v~~ 217 (267)
..|.|..
T Consensus 88 ~~l~V~~ 94 (97)
T 2bk8_A 88 AELFVKG 94 (97)
T ss_dssp EEEEETT
T ss_pred EEEEEEe
Confidence 8877753
No 416
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.48 E-value=1.8e-13 Score=109.12 Aligned_cols=99 Identities=18% Similarity=0.216 Sum_probs=64.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+....+.+|+.+.|.|.+.| |.+.+.|++++..+.... .+.|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 331 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSV 331 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSCEEEEEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCCccEEEE
Confidence 34558899999999999998 989999999776543221 35799999999999999999999988888787
Q ss_pred EEEEecccCCCeeecCCceeEEecCCcEEEEEEeecCCCCcEE
Q psy3045 212 ELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEIS 254 (267)
Q Consensus 212 ~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~ 254 (267)
.+.|.. .+ .+|..+.|.|.+.|.|.|.|.
T Consensus 332 ~l~V~~---~~-----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 332 ELKVYN---FT-----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEES---SC-----------CC-------------------
T ss_pred EEEEEe---ee-----------ccCCceEEEEEeCCCCCCccc
Confidence 777742 11 568899999999999999764
No 417
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=2.1e-13 Score=102.61 Aligned_cols=123 Identities=16% Similarity=0.298 Sum_probs=83.4
Q ss_pred CceEEEecCCCEEEEeEeCCC--CCceEEEEECC--ccC------------------CCC----------CCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG--KPV------------------PDH----------NEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~~------------------~~~----------~~~~l~i~~~ 188 (267)
+....+.+|++++|.|.+.+. +.+.+.|+|+. ..+ ... ....|.|.++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNV 87 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSC
T ss_pred CceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCC
Confidence 445588899999999998775 56799999843 211 000 1346999999
Q ss_pred CCCCCeEEEEEEEcCCC-C------ceEEEEEEEecccC----CCeeecC-CceeEEecCCcEEEEEEeecC-CC-CcEE
Q psy3045 189 RKEDKGMYQCVIRNEQE-S------AQASGELKLGGRFD----PPVIKES-FSDETLNPGPNYYFKCIASGN-PT-PEIS 254 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~~-~------~~~~~~l~v~~~~~----~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~i~ 254 (267)
+.+|+|.|.|.+.+... . ......|.|..... +|...+. +....+.+|+.+.|.|.+.|. |. +.+.
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 167 (242)
T 1hxm_B 88 EKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIH 167 (242)
T ss_dssp CGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEE
T ss_pred CcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEE
Confidence 99999999999987631 1 11134566653211 2332222 333345679999999999986 64 6999
Q ss_pred EEECCE-EcC
Q psy3045 255 WYLDGK-KLV 263 (267)
Q Consensus 255 W~~~~~-~l~ 263 (267)
|+++|. .+.
T Consensus 168 W~~~~~~~l~ 177 (242)
T 1hxm_B 168 WEEKKSNTIL 177 (242)
T ss_dssp EEESSSCCCC
T ss_pred EEcCCCEeec
Confidence 999997 553
No 418
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.48 E-value=1.5e-13 Score=110.10 Aligned_cols=119 Identities=13% Similarity=0.192 Sum_probs=86.9
Q ss_pred EecCCCEEEEeEeCCC---C-CceEEEEECCccCCCC--------------CCCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 146 IDFGRPAQFTCKYEGN---P-VKTISWMKDGKPVPDH--------------NEPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 146 ~~~g~~v~l~C~~~~~---p-~~~~~W~~~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+..|+.++|.|.+.+. | ...|.|++++..+... ....|.|..+..+|.|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 6789999999999887 3 2379999998665211 12368888999999999999999987644
Q ss_pred eEEEEEEE-ecccCCCeeecCCceeEEecCCcEEEEEEeecCCC--CcEEEEECCEEcCC
Q psy3045 208 QASGELKL-GGRFDPPVIKESFSDETLNPGPNYYFKCIASGNPT--PEISWYLDGKKLVN 264 (267)
Q Consensus 208 ~~~~~l~v-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~l~~ 264 (267)
.....+.+ .....+|.+.+.+.......|+.+.|.|.+.|+++ +.|.|+|||+.+..
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 319 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAEN 319 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCC
Confidence 33333322 11235777777665555556899999999999644 48999999998743
No 419
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.48 E-value=1.3e-13 Score=88.95 Aligned_cols=86 Identities=17% Similarity=0.254 Sum_probs=66.5
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
.||.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .....++... ..+|.|.+++.+|+|.
T Consensus 4 ~pP~i~~~~--~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~----~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 77 (100)
T 3irg_A 4 IPPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIH----SQEQGRFHIENTDDLTTLIIMDVQKQDGGL 77 (100)
T ss_dssp EEEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECC----TTGGGTEEEEECSSEEEEEESSCCGGGCEE
T ss_pred CCCeeecCC--CcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEee----cCCCCEEEEEecCCEEEEEEeecCcccCEE
Confidence 468888777 7899999999999999987 99999532111 1112233322 3689999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEE
Q psy3045 83 YLCVVNNSVGGESVETVLTVT 103 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~ 103 (267)
|+|.+.|..|.....+.|.|.
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 78 YTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEEEEE
Confidence 999999999888888887775
No 420
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.48 E-value=1.1e-13 Score=104.94 Aligned_cols=118 Identities=17% Similarity=0.366 Sum_probs=79.5
Q ss_pred EEEecCCCEEEEeEeCCC--CCceEEEEECCc--c---C---C-C---------------------CCCCeEEeccCCCC
Q psy3045 144 QTIDFGRPAQFTCKYEGN--PVKTISWMKDGK--P---V---P-D---------------------HNEPVFRIDSVRKE 191 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~--~---~---~-~---------------------~~~~~l~i~~~~~~ 191 (267)
..+.+|++++|.|.+.+. +...+.|+|... . + . . .....|.|.+++.+
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (253)
T 3liz_H 10 GLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSE 89 (253)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGG
T ss_pred EEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 478899999999998763 366899998431 1 0 0 0 01234999999999
Q ss_pred CCeEEEEEEEcCC----CCceEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeec-CCCC-cEEEEECCEE
Q psy3045 192 DKGMYQCVIRNEQ----ESAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASG-NPTP-EISWYLDGKK 261 (267)
Q Consensus 192 d~g~y~C~~~~~~----~~~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~ 261 (267)
|+|.|.|.+.+.. ........+.|. ....+|.+........+..|+.+.|.|.+.+ .|.+ .+.|+++|..
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 90 DTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp GCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred hCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 9999999998752 112223456664 3335676664444445667999999999998 6666 8999999873
No 421
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3e-13 Score=87.11 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=65.3
Q ss_pred CCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 133 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
+++.+...+....+.+|+.+.|.|.+ .|.+.+.|+|+|..+..+. ...|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 34555566677799999999999999 7888999999999886442 247999999999999999999997
Q ss_pred CCCceEEEEEEEe
Q psy3045 204 QESAQASGELKLG 216 (267)
Q Consensus 204 ~~~~~~~~~l~v~ 216 (267)
....++.|.|.
T Consensus 84 --~~~~~a~L~V~ 94 (100)
T 2yuz_A 84 --NVTLPAKVHVI 94 (100)
T ss_dssp --CCCEEEEEEEE
T ss_pred --CeeEEEEEEEe
Confidence 44567777776
No 422
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=87.93 Aligned_cols=76 Identities=28% Similarity=0.497 Sum_probs=64.6
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..+....+.
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 92 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSC 92 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 4455888999999999999999999999999988764422 3699999999999999999999998887777
Q ss_pred EEEEe
Q psy3045 212 ELKLG 216 (267)
Q Consensus 212 ~l~v~ 216 (267)
.|.|.
T Consensus 93 ~l~V~ 97 (99)
T 3puc_A 93 KLTIK 97 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 423
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=90.78 Aligned_cols=91 Identities=23% Similarity=0.266 Sum_probs=70.3
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE-----eeEEEEeecccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV-----SGTLIIKEAKVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d 79 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... . ...++... ...|.|.+++.+|
T Consensus 5 ~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~--~---~~~~~~~~~~~~~~~~L~i~~v~~~D 77 (110)
T 2dm2_A 5 SSGAPFFEMKL--KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQIS--P---KSDHYTIQRDLDGTCSLHTTASTLDD 77 (110)
T ss_dssp CSCCCCBSSCC--CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCC--T---TCSSEEEEECTTCEEEEEESSCCTTT
T ss_pred CCCCCEEEecC--cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECC--C---CCCeEEEEECCCcEEEEEECCCChhh
Confidence 34578898887 7889999999999999987 99999633211 1 12222221 2379999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
+|.|+|.+.|..|.....+.|.|...+.
T Consensus 78 ~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 78 DGNYTIMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp CSCCEEEEECTTCCEEECCCEEEECCSC
T ss_pred CEEEEEEEEECCCeEEEEEEEEEECCCC
Confidence 9999999999999988888888886543
No 424
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.46 E-value=2.5e-13 Score=88.75 Aligned_cols=76 Identities=22% Similarity=0.421 Sum_probs=64.4
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC---------CeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE---------PVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~---------~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.|..+......
T Consensus 20 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 99 (107)
T 3irg_B 20 PRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAA 99 (107)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEE
Confidence 3445888999999999999999999999999988764321 2799999999999999999999988877777
Q ss_pred EEEEe
Q psy3045 212 ELKLG 216 (267)
Q Consensus 212 ~l~v~ 216 (267)
.|.|.
T Consensus 100 ~l~V~ 104 (107)
T 3irg_B 100 AVTVL 104 (107)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77775
No 425
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=87.63 Aligned_cols=89 Identities=28% Similarity=0.336 Sum_probs=69.0
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE-EEeeEEEEeecccCCCeeE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK-QVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y 83 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ....++. ..+++|.|.+++.+|+|.|
T Consensus 5 ~~~~P~i~~~p--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~-----~~~~~~~~~~~~~L~i~~v~~~d~G~Y 77 (100)
T 2edj_A 5 SSGPPIILQGP--ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFP-----GRDPRATIQEQGTLQIKNLRISDTGTY 77 (100)
T ss_dssp CCSSCEEEECC--CCEEEESSSEEEECCEEECSSCCEEEEEESSSEES-----SSCSSCEECTTCCEEEESCCTTTCCEE
T ss_pred CCCCCEEEeCc--CCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECC-----CCCCCEEEcCCCEEEEccCCcccCEEE
Confidence 35678898877 7889999999999999987 99999632111 0112222 2345799999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEec
Q psy3045 84 LCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
+|.+.|..|.....+.|.|.++
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 78 TCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EEEEECSSCCCBCCEEEEEESC
T ss_pred EEEEEcCCCCEEEEEEEEEecC
Confidence 9999999998888888888753
No 426
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.46 E-value=4.5e-13 Score=103.63 Aligned_cols=116 Identities=18% Similarity=0.356 Sum_probs=83.6
Q ss_pred eEEEecCCCEEEEeEeCCCC--CceEEEEECC--ccCC-------------------C---------CCCCeEEeccCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEGNP--VKTISWMKDG--KPVP-------------------D---------HNEPVFRIDSVRK 190 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~~--~~~~-------------------~---------~~~~~l~i~~~~~ 190 (267)
...+.+|++++|.|.+.+.+ .+.+.|+++. ..+. . .....|.|.+++.
T Consensus 31 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 110 (291)
T 2gki_A 31 PELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTS 110 (291)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCG
T ss_pred cEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCH
Confidence 45788999999999998776 5789999853 1110 0 0124699999999
Q ss_pred CCCeEEEEEEEcCC-CCce----EEEEEEEecc-------------cCCCeeecCCceeEEecCCcEEEEEEeecCCCC-
Q psy3045 191 EDKGMYQCVIRNEQ-ESAQ----ASGELKLGGR-------------FDPPVIKESFSDETLNPGPNYYFKCIASGNPTP- 251 (267)
Q Consensus 191 ~d~g~y~C~~~~~~-~~~~----~~~~l~v~~~-------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~- 251 (267)
+|+|.|.|.+.+.. +... ....|.|... ..++.+...+....+.+|+.++|.|.+.+.+.+
T Consensus 111 ~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 190 (291)
T 2gki_A 111 EDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNS 190 (291)
T ss_dssp GGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEET
T ss_pred HHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccccc
Confidence 99999999999874 2111 1234555430 113455556667789999999999999988876
Q ss_pred -----cEEEEEC
Q psy3045 252 -----EISWYLD 258 (267)
Q Consensus 252 -----~i~W~~~ 258 (267)
.+.|||+
T Consensus 191 ~~~~~~v~W~k~ 202 (291)
T 2gki_A 191 RTRKNYLAWYQQ 202 (291)
T ss_dssp TTTEECEEEEEE
T ss_pred cccceeEEEEEE
Confidence 8999996
No 427
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.46 E-value=1.6e-12 Score=95.98 Aligned_cols=115 Identities=21% Similarity=0.316 Sum_probs=87.0
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 210 (267)
....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|.|.|+|.|.|..|.....
T Consensus 26 ~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 105 (215)
T 3mtr_A 26 VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLE 105 (215)
T ss_dssp SEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEE
T ss_pred ceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEE
Confidence 34578899999999999999999999999998886542 3679999999999999999999999988888
Q ss_pred EEEEEecccCCCeeecCCceeEEecCCcEEEEEEee----cCCCC--cEEEEECCEE
Q psy3045 211 GELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS----GNPTP--EISWYLDGKK 261 (267)
Q Consensus 211 ~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~i~W~~~~~~ 261 (267)
..+.+.....+|.... ....+..+.|.|... +.|.. .+.|.+++..
T Consensus 106 ~~l~v~~~P~~p~~~~-----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~ 157 (215)
T 3mtr_A 106 FILVQADTPSSPSIDQ-----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 157 (215)
T ss_dssp EEEEECCCCCCCEEEE-----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCC
T ss_pred EEEEECCCCCCCcceE-----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCC
Confidence 8888765433443221 123467788998743 22333 4788887753
No 428
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.46 E-value=4.8e-13 Score=96.04 Aligned_cols=152 Identities=9% Similarity=0.058 Sum_probs=96.7
Q ss_pred cccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 15 TFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 15 ~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
.+.+.| ....|.+|+++.|+|.+.- +.|.-..+. ... .. ......+.|.+++ +|++.|.|.+..
T Consensus 4 ~v~v~P--~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~----~~~--~~--g~~~~~~~ls~vs-~d~~~~~C~~~c 72 (196)
T 3bn3_B 4 WADLQP--RVAFVERGGSLWLNCSTNCPRPERGGLETSLRR----NGT--QR--GLRWLARQLVDIR-EPETQPVCFFRC 72 (196)
T ss_dssp CEEEES--SEEEEETTEEEEEEEEECCSSCSEEEEECSSEE----EEE--EE--ETTEEEEEEEEEC-SSEECCEEEEEE
T ss_pred EEEEcC--CCcEEcCCCeEEEEEeCCCCCCCccEEEEccCC----eeE--cc--ccCceEEEEEEEc-cCCCceEEEEEC
Confidence 445555 6788999999999999875 566431100 000 00 0012248899998 888889999876
Q ss_pred CCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCC-CCc--eE
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN-PVK--TI 166 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~--~~ 166 (267)
........+.|.|..+|..... . +....+.+|+.++|.|.+.+. |.. .+
T Consensus 73 ~~~~~~~~v~l~Vy~~P~~v~i---~-------------------------~~~~~~~~G~~~tL~C~v~~~~P~~~L~i 124 (196)
T 3bn3_B 73 ARRTLQARGLIRTFQRPDRVEL---M-------------------------PLPPWQPVGENFTLSCRVPGAGPRASLTL 124 (196)
T ss_dssp TTEEEEEECEEEEEBCCCCCEE---C-------------------------CCCSSEETTSEEEEEEEETTCBCGGGEEE
T ss_pred CCCceEEEEEEEEecCCCcCEE---c-------------------------cCCccccCCCcEEEEEEeCCccCCCCcEE
Confidence 5555677788888775432111 0 111136779999999999876 544 48
Q ss_pred EEEECCccCCCC-----C-C-----CeEEeccCCCCCCeEEEEEEEcCCC
Q psy3045 167 SWMKDGKPVPDH-----N-E-----PVFRIDSVRKEDKGMYQCVIRNEQE 205 (267)
Q Consensus 167 ~W~~~~~~~~~~-----~-~-----~~l~i~~~~~~d~g~y~C~~~~~~~ 205 (267)
.|++++..+... . . ..+.+.....++...|+|.|.+..+
T Consensus 125 ~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 125 TLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EEEETTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred EEEeCCEEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 999998776321 1 1 3444544444444499999998765
No 429
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.46 E-value=2.5e-13 Score=88.13 Aligned_cols=87 Identities=23% Similarity=0.256 Sum_probs=68.3
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G 81 (267)
..+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++... ....++.. ...+|.|.+++.+|+|
T Consensus 6 ~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~D~G 77 (103)
T 3qp3_A 6 DHAPRITLRM--RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVEL------QESSKIHYTNTSGVLTLEILDCHTDDSG 77 (103)
T ss_dssp CEEEEEEECC--CCEEEETTCCEEEEEEEEEESCCEEEEEETTEEC------CCCSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCCCEEEeCC--cceEEeCCCeEEEEEEEEecCCCEEEEEECCEEC------CCCCCEEEEECCCEEEEEEcCCCcccCE
Confidence 4478888877 7889999999999999977 9999963221 11223222 2247999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEec
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
.|+|.+.|..|.......|.|...
T Consensus 78 ~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 78 TYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEeCCCcEEEEEEEEEECC
Confidence 999999999999888888888753
No 430
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.45 E-value=2.6e-13 Score=87.34 Aligned_cols=86 Identities=21% Similarity=0.207 Sum_probs=66.9
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEE-----EEeeEEEEeecccCCC
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVK-----QVSGTLIIKEAKVEDS 80 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~ 80 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ...+.. .....|.|.+++.+|+
T Consensus 3 ~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~D~ 74 (99)
T 1g1c_A 3 MEAPKIFERI--QSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIE------RSDRIYWYWPEDNVCELVIRDVTGEDS 74 (99)
T ss_dssp CEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECC------CCSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred CCCCceEecC--cceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECC------CCCCEEEEEcCCCEEEEEECCCCcCCC
Confidence 3568888777 7889999999999999987 99999643211 122221 1234799999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEe
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
|.|+|.+.|..|.....+.|.|..
T Consensus 75 G~Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 75 ASIMVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCcEEEEEEEEEec
Confidence 999999999999888888887764
No 431
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.45 E-value=9e-14 Score=90.67 Aligned_cols=80 Identities=29% Similarity=0.590 Sum_probs=67.8
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|..
T Consensus 17 i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 96 (106)
T 1nct_A 17 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQ 96 (106)
T ss_dssp EEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBC
T ss_pred EEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeE
Confidence 3445566689999999999999999999999999998876432 3579999999999999999999999988
Q ss_pred eEEEEEEEe
Q psy3045 208 QASGELKLG 216 (267)
Q Consensus 208 ~~~~~l~v~ 216 (267)
..++.|.|.
T Consensus 97 ~~~~~l~V~ 105 (106)
T 1nct_A 97 EAEFTLTIQ 105 (106)
T ss_dssp CEEEEEEEC
T ss_pred EEEEEEEEE
Confidence 878777763
No 432
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=2.6e-13 Score=87.41 Aligned_cols=87 Identities=23% Similarity=0.263 Sum_probs=66.3
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCe
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSG 81 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G 81 (267)
+..||.|...+ .+..+.+|+++.|.|.+ . +.|++++.. +....++... ...|.|.++..+|+|
T Consensus 4 ~~~p~~~~~~~--~~~~v~~G~~v~l~C~v-~p~p~v~W~k~g~~------l~~~~r~~i~~~~~~~~L~I~~v~~~D~G 74 (100)
T 2yuz_A 4 GSSGLKILTPL--TDQTVNLGKEICLKCEI-SENIPGKWTKNGLP------VQESDRLKVVQKGRIHKLVIANALTEDEG 74 (100)
T ss_dssp SSCCCCCSBCC--CCEEEETTSCCCEEEEC-SSCCCEEEEETTEE------CCCCSSEEEEECSSEEEEEESSCCGGGCS
T ss_pred CCCCCEEeccC--CceEEcCCCCEEEEEEe-CCCCeEEEEECCEE------CCCCCcEEEEEeCCEEEEEECCCChhhCE
Confidence 34578888877 78999999999999999 6 999996332 1223333322 247999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
.|+|.+.|. ..+....|.|.++|.
T Consensus 75 ~Y~C~a~N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 75 DYVFAPDAY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp EEEEEESSS--CCCEEEEEEEECCSC
T ss_pred EEEEEEcCC--CeeEEEEEEEeCCCC
Confidence 999999987 556777888877553
No 433
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.45 E-value=9.5e-13 Score=84.49 Aligned_cols=77 Identities=22% Similarity=0.366 Sum_probs=62.7
Q ss_pred CCceEEEecCCCEEEEeEeC-CCCCceEEEEECCccCCCC----CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEE
Q psy3045 140 EPTVQTIDFGRPAQFTCKYE-GNPVKTISWMKDGKPVPDH----NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 140 ~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
.+....+.+|+++.|.|.+. +.|.+.+.|++++...... ....|.|.++..+|+|.|+|.+.|..+....+..|.
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEE
Confidence 34555889999999999998 6888999999975443222 256899999999999999999999998877777776
Q ss_pred Ee
Q psy3045 215 LG 216 (267)
Q Consensus 215 v~ 216 (267)
|.
T Consensus 96 V~ 97 (98)
T 1gl4_B 96 VQ 97 (98)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 434
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.45 E-value=5.2e-13 Score=91.11 Aligned_cols=76 Identities=22% Similarity=0.444 Sum_probs=63.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECC----------------------------ccCCCC----------CCCe
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG----------------------------KPVPDH----------NEPV 182 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~----------------------------~~~~~~----------~~~~ 182 (267)
+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... ....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 45668999999999999999999999999998 443211 1246
Q ss_pred EEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 183 FRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 183 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999988777777663
No 435
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.45 E-value=5.1e-13 Score=102.08 Aligned_cols=118 Identities=17% Similarity=0.331 Sum_probs=79.5
Q ss_pred CceEEEecCCCEEEEeEeCCCC-----CceEEEEECC--ccCC-------------C--------CCCCeEEeccCCCCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNP-----VKTISWMKDG--KPVP-------------D--------HNEPVFRIDSVRKED 192 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p-----~~~~~W~~~~--~~~~-------------~--------~~~~~l~i~~~~~~d 192 (267)
+....+.+|++++|.|.+.+.+ .+.+.|++++ ..+. . .....|.|.+++.+|
T Consensus 22 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 101 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAED 101 (268)
T ss_dssp CSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhH
Confidence 4555788999999999998876 4799999853 2110 0 122479999999999
Q ss_pred CeEEEEEEEcCCCC-ceEEEEEEEecccC------CCe--------------eecCCceeEEecCCcEEEEEEeecCCC-
Q psy3045 193 KGMYQCVIRNEQES-AQASGELKLGGRFD------PPV--------------IKESFSDETLNPGPNYYFKCIASGNPT- 250 (267)
Q Consensus 193 ~g~y~C~~~~~~~~-~~~~~~l~v~~~~~------~p~--------------~~~~~~~~~~~~g~~~~l~C~~~~~p~- 250 (267)
+|.|.|.+.+..+. ......|.|..... +|. ....+....+.+|+.++|.|.+.+.++
T Consensus 102 sG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 181 (268)
T 1x9q_A 102 LGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFG 181 (268)
T ss_dssp CEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGG
T ss_pred CEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCcccc
Confidence 99999999987432 11223444443110 111 122234567889999999999998764
Q ss_pred -CcEEEEEC
Q psy3045 251 -PEISWYLD 258 (267)
Q Consensus 251 -~~i~W~~~ 258 (267)
+.+.||++
T Consensus 182 ~~~v~W~k~ 190 (268)
T 1x9q_A 182 HYWMNWVRQ 190 (268)
T ss_dssp GCEEEEEEE
T ss_pred ccEEEEEEe
Confidence 78999985
No 436
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=3.5e-13 Score=86.87 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=66.4
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-E--eeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-V--SGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-~--~~~l~i~~~~~~d~G~Y 83 (267)
.||.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .. ...+... . ...|.|.+++..|+|.|
T Consensus 4 ~~P~~~~~p--~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~--~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 77 (100)
T 2kdg_A 4 GPPRFIQVP--ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQ--SD--DLHKMIVSEKGLHSLIFEVVRASDAGAY 77 (100)
T ss_dssp EEEECCCCC--CCEEEETTCCEEEEEECEEESCCEEEEEETTEEEC--CC--SSSCEEEETTTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEeCC--CCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECc--CC--CcEEEEEcCCCeEEEEECCCCcccCEEE
Confidence 468888777 7889999999999999987 99999632111 11 1111111 1 24899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEe
Q psy3045 84 LCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~ 104 (267)
+|.+.|..|.....+.|.|..
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 78 ACVAKNRAGEATFTVQLDVLA 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEEEEEe
Confidence 999999999888888888865
No 437
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.44 E-value=3.3e-13 Score=86.93 Aligned_cols=76 Identities=25% Similarity=0.521 Sum_probs=64.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC-----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQA 209 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 209 (267)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..+..+|+|.|+|.|.|..+....
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEE
Confidence 44558889999999999999999999999999887532 1267999999999999999999999988777
Q ss_pred EEEEEEe
Q psy3045 210 SGELKLG 216 (267)
Q Consensus 210 ~~~l~v~ 216 (267)
.+.|.|.
T Consensus 92 ~~~l~V~ 98 (100)
T 3irg_A 92 TVNIHIR 98 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777664
No 438
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.44 E-value=3.6e-13 Score=88.12 Aligned_cols=89 Identities=27% Similarity=0.380 Sum_probs=62.9
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceE--EEEeeEEEEeecccCCCee
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRV--KQVSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~ 82 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ...+. ...+..|.|.+++.+|+|.
T Consensus 7 ~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 7 ERVAPTITGNL--ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLV------EDSGIVLKDGNRNLTIRRVRKEDEGL 78 (108)
T ss_dssp ----CCCBSCC--CCEEEETTCCEEEECBCC----CCEEEEESSSBCC------CBTTEEEETTTTEEEECSCCGGGCEE
T ss_pred ccCCCceecCC--CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcc------cCCCeEEeCCCcEEEEeecCcccCEE
Confidence 45678898877 7899999999999999987 99999643221 12222 2234689999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEecc
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPL 106 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~ 106 (267)
|+|.+.|..|.....+.|.|...+
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC--
T ss_pred EEEEEEeCCCceEEEEEEEEeCCC
Confidence 999999999998888899888654
No 439
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.44 E-value=5.6e-13 Score=82.68 Aligned_cols=69 Identities=20% Similarity=0.381 Sum_probs=56.4
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
...+.+|+.+.|.|.+.+ |.+.+.|+|||.++..+. ...|.|.++..+|+|.|+|.|.| ...++.|
T Consensus 5 ~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l 79 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLV 79 (84)
T ss_dssp CEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEEE
T ss_pred EEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEEE
Confidence 457889999999999866 888999999999886542 35799999999999999999855 3456667
Q ss_pred EEe
Q psy3045 214 KLG 216 (267)
Q Consensus 214 ~v~ 216 (267)
.|.
T Consensus 80 ~V~ 82 (84)
T 2lu7_A 80 SVE 82 (84)
T ss_dssp EEC
T ss_pred EEE
Confidence 664
No 440
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=5.9e-13 Score=84.43 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=61.2
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEE--E--eeEEEEeecccCCCee
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQ--V--SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~--~--~~~l~i~~~~~~d~G~ 82 (267)
..+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++.. +....++.. . ..+|.|.+++.+|+|.
T Consensus 3 ~~~~~~~~~~--~~~~v~~G~~v~l~C~v~~~~~~v~W~k~g~~------i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~ 74 (93)
T 1waa_A 3 MALIEVEKPL--YGVEVFVGETAHFEIELSEPDVHGQWKLKGQP------LAASPDCEIIEDGKKHILILHNCQLGMTGE 74 (93)
T ss_dssp CCCCCEEECC--CCEEEETTSCEEEEEEESSSSCCCEEEETTEE------CCCBTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCCcEeeccC--cceEEeCCCCEEEEEEECCCCCeEEEEECCEE------CcCCCCEEEEEECCEEEEEECCCChhhCEE
Confidence 4578888887 7899999999999999987 999996331 122233322 2 2489999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEe
Q psy3045 83 YLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
|+|.+.|. .....|.|.+
T Consensus 75 Y~C~a~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 75 VSFQAANT----KSAANLKVKE 92 (93)
T ss_dssp EEEEETTE----EEEEEEEEEC
T ss_pred EEEEECCC----cEEEEEEEEc
Confidence 99999763 3556666653
No 441
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.44 E-value=3.3e-13 Score=88.12 Aligned_cols=87 Identities=22% Similarity=0.332 Sum_probs=67.6
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE-Ee---eEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ-VS---GTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~-~~---~~l~i~~~~~~d~G 81 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ....++.. .+ ..|.|.+++.+|+|
T Consensus 11 ~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~D~G 82 (107)
T 3irg_B 11 GSPPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQL------AASERLSFPADGAEHGLLLTAALPTDAG 82 (107)
T ss_dssp CEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEEC------CCCSSEECCEETTEEEEEESSCCGGGCE
T ss_pred CCCCeeEcCC--ccEEEeCCCeEEEEEEEeecCCCEEEEEECCeEC------CCCCcEEEEeCCCEEEEEEccCCHHhCE
Confidence 3478888877 7899999999999999988 9999963211 11223222 22 37999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEec
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
.|+|.+.|..|.....+.|.|..+
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 83 VYVCRARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC-
T ss_pred EEEEEEEcCCCcEEEEEEEEEEcC
Confidence 999999999988888888888764
No 442
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=9.8e-13 Score=87.52 Aligned_cols=75 Identities=19% Similarity=0.414 Sum_probs=64.5
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC--------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH--------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGEL 213 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 213 (267)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 111 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRI 111 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEE
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEE
Confidence 4457889999999999999999999999999887532 13459999999999999999999999988778877
Q ss_pred EEe
Q psy3045 214 KLG 216 (267)
Q Consensus 214 ~v~ 216 (267)
.|.
T Consensus 112 ~V~ 114 (118)
T 2e7c_A 112 RVV 114 (118)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 443
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=4.1e-13 Score=88.25 Aligned_cols=83 Identities=17% Similarity=0.265 Sum_probs=65.9
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCC---CCceEEEEECCcc-CCC------------C-----CCCeEEeccCCCCCC
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGN---PVKTISWMKDGKP-VPD------------H-----NEPVFRIDSVRKEDK 193 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~---p~~~~~W~~~~~~-~~~------------~-----~~~~l~i~~~~~~d~ 193 (267)
..+...+....+.+|++++|.|.+.+. |.|.|.|||+... +.. . ....|.|.++...|+
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 345556677789999999999998764 7889999997421 110 0 136799999999999
Q ss_pred eEEEEEEEcCCCCceEEEEEEEec
Q psy3045 194 GMYQCVIRNEQESAQASGELKLGG 217 (267)
Q Consensus 194 g~y~C~~~~~~~~~~~~~~l~v~~ 217 (267)
|.|+|+|.|..+..+..+.|.|..
T Consensus 93 G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 93 GYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp SCEEEEEECSSCEEEEEECCEEEC
T ss_pred EEEEEEEEEcCCcEEEEEEEEEEc
Confidence 999999999999888888888863
No 444
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.43 E-value=4.7e-13 Score=86.28 Aligned_cols=74 Identities=30% Similarity=0.582 Sum_probs=62.4
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|....++
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 3457889999999999999999999999999877542 124799999999999999999999998877666
Q ss_pred EEEE
Q psy3045 212 ELKL 215 (267)
Q Consensus 212 ~l~v 215 (267)
.|.|
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 445
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.43 E-value=5.2e-13 Score=93.25 Aligned_cols=74 Identities=30% Similarity=0.515 Sum_probs=64.5
Q ss_pred eEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC----------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 143 VQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
...+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 50 ~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 129 (154)
T 1fhg_A 50 DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAE 129 (154)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEE
Confidence 3478899999999999999999999999998876432 247999999999999999999999998888888
Q ss_pred EEEe
Q psy3045 213 LKLG 216 (267)
Q Consensus 213 l~v~ 216 (267)
|.|.
T Consensus 130 l~V~ 133 (154)
T 1fhg_A 130 LLVE 133 (154)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8886
No 446
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=84.27 Aligned_cols=74 Identities=19% Similarity=0.437 Sum_probs=61.3
Q ss_pred ceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 142 TVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 142 ~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
....+.+|+.+.|.|.+.+.| +.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+.....+.+.|.
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 89 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence 344678899999999999876 6999999998875432 4589999999999999999999998877666666554
No 447
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.42 E-value=5.5e-13 Score=88.57 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=59.6
Q ss_pred cCCCEEEEeEeCCCCCceEEEEECCccCCCCC----------------CCeEEeccCCCCCCeEEEEEEEcCCCCceEEE
Q psy3045 148 FGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----------------EPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211 (267)
Q Consensus 148 ~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~----------------~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 211 (267)
.+..+.|.|.+.|.|.|.++|+|||.++..+. ...|.|..+...|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 46789999999999999999999999886532 24689999999999999999999999888777
Q ss_pred EEEEe
Q psy3045 212 ELKLG 216 (267)
Q Consensus 212 ~l~v~ 216 (267)
.+.+.
T Consensus 94 ~l~v~ 98 (126)
T 1he7_A 94 MAAFM 98 (126)
T ss_dssp EECCC
T ss_pred EEEEE
Confidence 77665
No 448
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=1.2e-12 Score=84.90 Aligned_cols=83 Identities=23% Similarity=0.229 Sum_probs=61.5
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCc--eEEEE----eeEEEEeecccCCCee
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLND--RVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~--~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
|+.|...+ .++.+.+|+++.|.|.+.+ +.|++++... .... ++... ...|.|.+++.+|+|.
T Consensus 7 p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~l------~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 78 (103)
T 1x44_A 7 GIMVTKQL--EDTTAYCGERVELECEVSEDDANVKWFKNGEEI------IPGPKSRYRIRVEGKKHILIIEGATKADAAE 78 (103)
T ss_dssp SCCCSBCC--CCEEEETTEEEEEEEECSSSSCCCEEEETTEEC------CCSTTCSEEEEEETTEEEEEEEEECTTTCSE
T ss_pred CceeeccC--CCEEEECCCCEEEEEEecCCCCeEEEEECCEEC------CCCCceEEEEEEcCCEEEEEECCCCcccCEE
Confidence 44577776 7889999999999999987 9999964321 1111 22221 2589999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|+|.+.| ......|.|...+.
T Consensus 79 Y~C~a~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 79 YSVMTTG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp EEEEETT----EEEEEEEEEECCCS
T ss_pred EEEEECC----CcEEEEEEEeCCCC
Confidence 9999976 46667777776543
No 449
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.41 E-value=3.2e-13 Score=86.88 Aligned_cols=86 Identities=23% Similarity=0.306 Sum_probs=66.0
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~ 82 (267)
.||.|...+ ....+.+|+++.|.|.+.+ +.|++++.... ....++.. ...+|.|.+++.+|+|.
T Consensus 4 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 76 (99)
T 1u2h_A 4 APPTFKVSL--MDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVR-----PDQRRFAEEAEGGLCRLRILAAERGDAGF 76 (99)
T ss_dssp EEEEEEECC--CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECC-----CBTTEEEEECGGGEEEEEESSCCGGGCEE
T ss_pred CCCEEEEcC--CceEecCCCEEEEEEEEEEcCCCEEEEEECCEECC-----CCCCEEEEECCCCEEEEEEccCCcCCCEE
Confidence 468888777 6789999999999999987 99999633111 11122221 12379999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEe
Q psy3045 83 YLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
|+|.+.|..|.....+.|.|.+
T Consensus 77 Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 77 YTCKAVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCceeEEEEEEEEC
Confidence 9999999999888888888764
No 450
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.41 E-value=1.8e-12 Score=83.23 Aligned_cols=83 Identities=19% Similarity=0.372 Sum_probs=63.3
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEec-c-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQ-E-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~-~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 86 (267)
+|.+...+ +....+.+|+++.|.|.+. + +.|++++.+.. ..+....+++|.|.+++.+|+|.|+|.
T Consensus 9 ~~~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~-------~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (98)
T 1gl4_B 9 PIMVTVEE-QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKL-------PSRAMDFNGILTIRNVQPSDAGTYVCT 80 (98)
T ss_dssp CEEEEECS-CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCC-------CTTEEEETTEEEECSCCGGGCEEEEEE
T ss_pred CcEEEEeC-CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCC-------CceeecCCCEEEEeCCChhhCEEEEEE
Confidence 44444433 2678999999999999998 4 99999643221 122334556899999999999999999
Q ss_pred EEcCCCccEEEEEEEEE
Q psy3045 87 VNNSVGGESVETVLTVT 103 (267)
Q Consensus 87 ~~~~~~~~~~~~~l~V~ 103 (267)
+.|..|.....+.|.|.
T Consensus 81 a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 81 GSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EECSSCEEEEEEEEEEC
T ss_pred ecCCCCccccEEEEEEe
Confidence 99999988887777764
No 451
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.41 E-value=6.9e-13 Score=85.29 Aligned_cols=85 Identities=24% Similarity=0.277 Sum_probs=66.3
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCee
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
.+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++.. +....++... ...|.|.++..+|+|.
T Consensus 5 ~~P~i~~~~--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 76 (99)
T 3puc_A 5 SKPVIVTGL--QDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKA------ITQGGKYKLSEDKGGFFLEIHKTDTSDSGL 76 (99)
T ss_dssp EEEEEEECC--CCEEEESSSCEEEEEEEEEESCCEEEEEETTEE------CCSSSSEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCCEEEecC--ccEEEeCCCcEEEEEEEEecCCCEEEEEECCEE------CcCCCCEEEEEeCCEEEEEECCCCcccCEE
Confidence 467888777 7889999999999999987 999996321 1122333322 2379999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEe
Q psy3045 83 YLCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~ 104 (267)
|+|.+.|..|.......|.|..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 77 YTCTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEeEEEEEEEEe
Confidence 9999999999888888887753
No 452
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.6e-12 Score=84.22 Aligned_cols=80 Identities=16% Similarity=0.310 Sum_probs=63.5
Q ss_pred CCcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC-----------CeEEeccCCCCCCeEEEEEEE
Q psy3045 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE-----------PVFRIDSVRKEDKGMYQCVIR 201 (267)
Q Consensus 133 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~-----------~~l~i~~~~~~d~g~y~C~~~ 201 (267)
+|..+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+..... ..|.|.++..+|+|.|+|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 3444555666778999999999999977 6789999999988765431 478999999999999999998
Q ss_pred cCCCCceEEEEEEEec
Q psy3045 202 NEQESAQASGELKLGG 217 (267)
Q Consensus 202 ~~~~~~~~~~~l~v~~ 217 (267)
| ...+..|.|..
T Consensus 85 n----~~~~~~l~V~~ 96 (103)
T 1x44_A 85 G----GQSSAKLSVDL 96 (103)
T ss_dssp T----EEEEEEEEEEC
T ss_pred C----CcEEEEEEEeC
Confidence 7 35566677764
No 453
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.41 E-value=4.4e-13 Score=89.75 Aligned_cols=82 Identities=15% Similarity=0.297 Sum_probs=63.0
Q ss_pred EEEecCCCEEEEeEeCCC--CCceEEEEECCccCCC-----C------------CCCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 144 QTIDFGRPAQFTCKYEGN--PVKTISWMKDGKPVPD-----H------------NEPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~~~~~-----~------------~~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
..+.+|+.+.|.|.+.+. |.+.+.|++++..+.. . ....|.|.++..+|+|.|+|.|.|..
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 97 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence 367889999999999884 4578999998875421 0 23479999999999999999999999
Q ss_pred CCceEEEEEEEecccCCCeeecCC
Q psy3045 205 ESAQASGELKLGGRFDPPVIKESF 228 (267)
Q Consensus 205 ~~~~~~~~l~v~~~~~~p~~~~~~ 228 (267)
+....+..|.|. .+|.+...+
T Consensus 98 g~~~~~~~l~V~---~~p~i~~~p 118 (122)
T 3s35_X 98 MTKKNSTFVRVH---EKPFVAFGS 118 (122)
T ss_dssp CEEEEEEEEEEE---EEECC----
T ss_pred CceEEEEEEEEe---ccCeEEeec
Confidence 988888888876 456665544
No 454
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.40 E-value=1.6e-12 Score=84.94 Aligned_cols=91 Identities=13% Similarity=0.223 Sum_probs=65.5
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcce--eccccCCceEEE-----EeeEEEEeecccCC
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSR--KVAVPLNDRVKQ-----VSGTLIIKEAKVED 79 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~--~~~~~~~~~~~~-----~~~~l~i~~~~~~d 79 (267)
.+|.|...+ .+..+.+|+++.|.|.+.+ +.|++++..... ........|+.. ...+|.|.+++.+|
T Consensus 5 ~~p~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 5 GSQGQFPLT--QNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp ---CCCEEC--CCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred cCCCccccC--CeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 356677666 7899999999999999988 999985331100 001112334443 35689999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEec
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAP 105 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~ 105 (267)
+|.|+|.+.+ .+..+..+.|.|..+
T Consensus 83 ~G~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 83 EGQYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp CEEEEEEECS-SSCEEEEEEEEEECC
T ss_pred CeEEEEEEEc-CCCcEEEEEEEEEcC
Confidence 9999999999 777788888888764
No 455
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.40 E-value=1.8e-12 Score=82.15 Aligned_cols=78 Identities=14% Similarity=0.214 Sum_probs=60.9
Q ss_pred CcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 134 PLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 134 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
++.+...+....+.+|+.+.|.|.+.+ +.+.+.|+|||.++..+. ...|.|.++..+|+|.|+|.|.|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~- 82 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT- 82 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE-
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC-
Confidence 334445566678999999999999976 457899999999886532 247999999999999999999874
Q ss_pred CCceEEEEEEEe
Q psy3045 205 ESAQASGELKLG 216 (267)
Q Consensus 205 ~~~~~~~~l~v~ 216 (267)
..+..|.|.
T Consensus 83 ---~~sa~L~V~ 91 (93)
T 1waa_A 83 ---KSAANLKVK 91 (93)
T ss_dssp ---EEEEEEEEE
T ss_pred ---cEEEEEEEE
Confidence 345566664
No 456
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=9.3e-13 Score=98.30 Aligned_cols=123 Identities=18% Similarity=0.218 Sum_probs=81.6
Q ss_pred CceEEEecCCCEEEEeEeCCC--CCceEEEEECC--ccC-----------------CCC----------CCCeEEeccCC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG--KPV-----------------PDH----------NEPVFRIDSVR 189 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~~-----------------~~~----------~~~~l~i~~~~ 189 (267)
+....+.+|++++|.|.+.+. +.+.+.|+|+. ..+ ... ....|.|.+++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (230)
T 1ypz_F 8 EISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLE 87 (230)
T ss_dssp CSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCC
T ss_pred CCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCC
Confidence 455588899999999998764 56789999843 111 000 12379999999
Q ss_pred CCCCeEEEEEEEcC--CCC--ceEEEEEEEeccc------CCCeeec-CCceeEEecCCcEEEEEEeecC-CC-CcEEEE
Q psy3045 190 KEDKGMYQCVIRNE--QES--AQASGELKLGGRF------DPPVIKE-SFSDETLNPGPNYYFKCIASGN-PT-PEISWY 256 (267)
Q Consensus 190 ~~d~g~y~C~~~~~--~~~--~~~~~~l~v~~~~------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~ 256 (267)
.+|+|.|.|.+.+. ... ......|.|.... .+|...+ .+....+.+|+.+.|.|.+.|. |. +.+.|+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~ 167 (230)
T 1ypz_F 88 EEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWK 167 (230)
T ss_dssp GGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEEE
T ss_pred hhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEEE
Confidence 99999999999874 111 1122355554110 1222221 2333345568999999999986 65 599999
Q ss_pred E-CCEEcC
Q psy3045 257 L-DGKKLV 263 (267)
Q Consensus 257 ~-~~~~l~ 263 (267)
+ ||+.+.
T Consensus 168 ~~~g~~l~ 175 (230)
T 1ypz_F 168 EKDGNTIL 175 (230)
T ss_dssp CTTSSCBC
T ss_pred ccCCeEcc
Confidence 9 887664
No 457
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.39 E-value=3.3e-12 Score=85.47 Aligned_cols=90 Identities=20% Similarity=0.241 Sum_probs=63.8
Q ss_pred eeEEecCCCeEEEEEEecc-------eeeeecccCcceeccccCC------ceEEEEeeEEEEeecccCCCeeEEEEEEc
Q psy3045 23 IRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKVAVPLN------DRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 89 (267)
..+.+.+|+++.|.|.+.+ +.|++++............ .......++|.|.+++.+|+|.|+|.+.|
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 4568999999999999975 7999964322110000111 11123456899999999999999999999
Q ss_pred CCCccEEEEEEEEEeccccccCC
Q psy3045 90 SVGGESVETVLTVTAPLAAGVEP 112 (267)
Q Consensus 90 ~~~~~~~~~~l~V~~~~~~~~~~ 112 (267)
..|.....+.|.|.+.+.+...+
T Consensus 96 ~~g~~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 96 GLMTKKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp SSCEEEEEEEEEEEEEECC----
T ss_pred CCCceEEEEEEEEeccCeEEeec
Confidence 99998899999999877655544
No 458
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.39 E-value=4.2e-13 Score=87.47 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=67.5
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCe
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSG 81 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G 81 (267)
..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ....++... +.+|.|.+++..|+|
T Consensus 12 ~~~~~i~~~p--~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l------~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (106)
T 1nct_A 12 TLAARILTKP--RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVL------STSARHQVTTTKYKSTFEISSVQASDEG 83 (106)
T ss_dssp SCCCEEEECC--CCEEESSSSCEECCEEEECSSCCBCCBCSSSSCC------TTCSSEEEEECSSEEEEEECCCCSSCCS
T ss_pred CCCCEEEECC--CCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEEC------CCCCCEEEEECCCEEEEEECcCCchhCE
Confidence 3468888887 7899999999999999987 9999964321 123333322 468999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEE
Q psy3045 82 KYLCVVNNSVGGESVETVLTVT 103 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~ 103 (267)
.|+|.+.|..|.....+.|.|.
T Consensus 84 ~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 84 NYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp EEEECCBCSSCBCCEEEEEEEC
T ss_pred EEEEEEEeCCCeEEEEEEEEEE
Confidence 9999999999988888887764
No 459
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.39 E-value=2.8e-12 Score=81.78 Aligned_cols=75 Identities=21% Similarity=0.418 Sum_probs=62.7
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-----CCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEE
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-----EPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 215 (267)
+....+.+|+.+.|.|.+.+ .+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+.....+.+.|
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 85 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNV 85 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEE
Confidence 44557889999999999887 46999999998876543 468999999999999999999999987777777777
Q ss_pred ec
Q psy3045 216 GG 217 (267)
Q Consensus 216 ~~ 217 (267)
..
T Consensus 86 ~~ 87 (95)
T 4hwu_A 86 TD 87 (95)
T ss_dssp CC
T ss_pred eC
Confidence 53
No 460
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.39 E-value=1.3e-12 Score=84.62 Aligned_cols=70 Identities=14% Similarity=0.268 Sum_probs=59.7
Q ss_pred ecCCCEEEEeEeCCCCCceEEEEECCccCCCCCC----------Ce----EEeccCCCCCCeEEEEEEEcCCCCceEEEE
Q psy3045 147 DFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNE----------PV----FRIDSVRKEDKGMYQCVIRNEQESAQASGE 212 (267)
Q Consensus 147 ~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~----------~~----l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 212 (267)
..+..+.|.|.+.|.|.|.+.|+++|..+..+.. .. |.|.++..+|+|.|+|.|.|..|....++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 3477899999999999999999999988765431 22 999999999999999999999998888877
Q ss_pred EEEe
Q psy3045 213 LKLG 216 (267)
Q Consensus 213 l~v~ 216 (267)
|.|.
T Consensus 94 l~V~ 97 (103)
T 1wwb_X 94 AHFM 97 (103)
T ss_dssp ECCS
T ss_pred EEEC
Confidence 7765
No 461
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.39 E-value=5e-12 Score=93.44 Aligned_cols=119 Identities=16% Similarity=0.282 Sum_probs=87.5
Q ss_pred EEEecCCCEEEEeEeCCC-C---CceEEEEECCccCCCCCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEeccc
Q psy3045 144 QTIDFGRPAQFTCKYEGN-P---VKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRF 219 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~-p---~~~~~W~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~~ 219 (267)
..+..|+.++|.|.+.+. | +..+.|+|++.++.. ....|.+......++|.|+|.+.+..+....+..+.+...
T Consensus 12 ~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG-aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~- 89 (304)
T 3shs_A 12 RCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN-NTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEE- 89 (304)
T ss_dssp SSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC-CSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECB-
T ss_pred ccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC-CcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEecc-
Confidence 367789999999997644 5 458999999988764 5568999999999999999999998776655555555432
Q ss_pred CCCeeec-CCceeEEecCCcEEEEEEe--e-cCC-----CCcEEEEECCEEcCC
Q psy3045 220 DPPVIKE-SFSDETLNPGPNYYFKCIA--S-GNP-----TPEISWYLDGKKLVN 264 (267)
Q Consensus 220 ~~p~~~~-~~~~~~~~~g~~~~l~C~~--~-~~p-----~~~i~W~~~~~~l~~ 264 (267)
..+.+.. .|.+..+..|..+.|.+.+ . |.| ...+.|++||..+..
T Consensus 90 a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg 143 (304)
T 3shs_A 90 AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT 143 (304)
T ss_dssp CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES
T ss_pred CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC
Confidence 1223322 3445555677889999887 4 344 359999999988753
No 462
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.38 E-value=2.5e-12 Score=89.77 Aligned_cols=91 Identities=22% Similarity=0.302 Sum_probs=70.1
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEE-----eeEEEEeecccCC
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQV-----SGTLIIKEAKVED 79 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d 79 (267)
...+|.|...+ ....+.+|+++.|.|.+.+ +.|++++... ....++... ...|.|.+++..|
T Consensus 38 v~~~P~~~~~~--~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~------~~~~~~~~~~~~~~~~~L~I~~v~~~D 109 (154)
T 1fhg_A 38 PHVKPYFTKTI--LDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPV------KESRHFQIDYDEEGNCSLTISEVCGDD 109 (154)
T ss_dssp CCEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEEC------CCSSSEEEEECTTCEEEEEESSCCGGG
T ss_pred CCCCCeEEccC--CcEEEeCCCeEEEEEEEEEecCCEEEEEECCEEC------CCCCcEEEEECCCCeEEEEECCCChhc
Confidence 34578888877 6799999999999999987 9999964321 122333322 3589999999999
Q ss_pred CeeEEEEEEcCCCccEEEEEEEEEecccc
Q psy3045 80 SGKYLCVVNNSVGGESVETVLTVTAPLAA 108 (267)
Q Consensus 80 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~ 108 (267)
+|.|+|.+.|..|.....+.|.|...+..
T Consensus 110 ~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 110 DAKYTCKAVNSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC---
T ss_pred CEEEEEEEEECCCeEEEEEEEEEeCcCcC
Confidence 99999999999999888888998876543
No 463
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.38 E-value=3.6e-12 Score=98.01 Aligned_cols=116 Identities=14% Similarity=0.253 Sum_probs=81.0
Q ss_pred CceEEEecCCCEEEEeEeCCC--CCceEEEEECC--ccCC----------------------------CCCCCeEEeccC
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDG--KPVP----------------------------DHNEPVFRIDSV 188 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~~~----------------------------~~~~~~l~i~~~ 188 (267)
+....+.+|++++|.|.+.+. +.+.+.|++.. ..+. ......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 344478899999999998875 56789999743 1110 011247999999
Q ss_pred CCCCCeEEEEEEEcC---------CCCceEEEEEEEec------------ccCCCeeecCCceeEEecCCcEEEEEEeec
Q psy3045 189 RKEDKGMYQCVIRNE---------QESAQASGELKLGG------------RFDPPVIKESFSDETLNPGPNYYFKCIASG 247 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~---------~~~~~~~~~l~v~~------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 247 (267)
..+|+|.|.|.+.+. .........|.|.. ...++.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999886 11112233455543 012455555555 78899999999999988
Q ss_pred -CC-CCcEEEEE
Q psy3045 248 -NP-TPEISWYL 257 (267)
Q Consensus 248 -~p-~~~i~W~~ 257 (267)
.+ .+.+.|||
T Consensus 166 ~~~~~~~v~W~r 177 (280)
T 3fku_X 166 NNVGNQGAAWLQ 177 (280)
T ss_dssp CCCCTTCCEEEE
T ss_pred CCCCCceEEEEE
Confidence 44 37999997
No 464
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.38 E-value=1.2e-12 Score=84.40 Aligned_cols=89 Identities=22% Similarity=0.352 Sum_probs=64.0
Q ss_pred CCCcccCCCC--ceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCC-ceEEEEeeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVSD--IIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLN-DRVKQVSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~~--~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y 83 (267)
.||.|...+. .....+.+|+++.|.|.+.+ +.|++++.... ...... ........+|.|.+++..|+|.|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 80 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFK--QEHRIGGYKVRNQHWSLIMESVVPSDKGNY 80 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECC--GGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcc--cccccccEEEecCeEEEEEccCCcCCCEEE
Confidence 3577775442 25688999999999999987 99999633221 111111 12222345899999999999999
Q ss_pred EEEEEcCCCccEEEEEEEE
Q psy3045 84 LCVVNNSVGGESVETVLTV 102 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V 102 (267)
+|.+.|..|.....+.|.|
T Consensus 81 ~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 81 TCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEEE
Confidence 9999999988777777765
No 465
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.4e-12 Score=85.65 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=69.6
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE---EeeEEEEeecccCCCee
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ---VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~ 82 (267)
..+|.|...+ ..+.+.+|+++.|.|.+.+ +.|++++...... ....... ...+|.|.+++.+|+|.
T Consensus 7 ~~~P~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm3_A 7 GFRPHFLQAP--GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPD----SAHKMLVRENGVHSLIIEPVTSRDAGI 80 (110)
T ss_dssp CCCCEEEECC--CEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCC----SSEEEEECTTSCEEEEESSCCGGGCSB
T ss_pred CCCCcEEeCC--CcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCC----CceEEEEecCCeEEEEEeeCCcccCEE
Confidence 4578898887 7899999999999999987 9999963321110 0111111 12489999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|+|.+.|..|.....+.|.|...+.
T Consensus 81 Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 81 YTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp BCEEEECSSCEEEECCEEEEECCCC
T ss_pred EEEEEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999888888888887554
No 466
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.37 E-value=3.2e-12 Score=81.50 Aligned_cols=77 Identities=29% Similarity=0.364 Sum_probs=63.7
Q ss_pred eeEEecCCCeEEEEEEecc---eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETV 99 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 99 (267)
....+.+|+++.|.|.+.+ +.|++++. .+....++...+..|.|.+++.+|+|.|+|.+.|..|.....+.
T Consensus 9 ~~~~v~~G~~~~l~C~~~~~p~v~W~k~g~------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (95)
T 4hwu_A 9 EAYVVAPGESLELQCMLKDAAVISWTKDGV------HLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFM 82 (95)
T ss_dssp EEEEECTTSCEEEECCCCTTCEEEEEETTE------EECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CcEEECCCCEEEEEEEeCCCCEEEEEECCE------ECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEE
Confidence 6789999999999999988 99999632 12233555566779999999999999999999999988888888
Q ss_pred EEEEec
Q psy3045 100 LTVTAP 105 (267)
Q Consensus 100 l~V~~~ 105 (267)
|.|.++
T Consensus 83 l~V~~~ 88 (95)
T 4hwu_A 83 VNVTDA 88 (95)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 888764
No 467
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.37 E-value=4.2e-12 Score=80.00 Aligned_cols=58 Identities=21% Similarity=0.453 Sum_probs=49.1
Q ss_pred EEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcC
Q psy3045 145 TIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNE 203 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~ 203 (267)
.+.+|+.+.|.|.+.+ |.+.+.|+|||.++..+. ...|.|.++..+|+|.|+|.|.|.
T Consensus 17 ~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 17 HAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp ECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 4568999999999865 778899999999987543 246999999999999999998664
No 468
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=2.6e-12 Score=85.40 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=66.2
Q ss_pred CCCcccCCC-CceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeE
Q psy3045 12 KAPTFSSVS-DIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 12 ~~P~~~~~~-~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 83 (267)
.+|.|.... ....+.+.+|+++.|.|.+.+ +.|++++.... .....+.. ....|.|.++..+|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-----TSRVHVRTSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-----CSSCEEEECSSEEEEEESSCCTTTCEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-----CCcEEEEECCCeEEEEECCCChhcCEEE
Confidence 367775431 126789999999999999988 99999643221 01111111 245699999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEecc
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPL 106 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~ 106 (267)
+|.+.|..|.....+.|.|...|
T Consensus 95 ~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEeCCCeEEEEEEEEEEcCC
Confidence 99999999988888888887643
No 469
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.36 E-value=4e-12 Score=80.10 Aligned_cols=71 Identities=18% Similarity=0.338 Sum_probs=50.0
Q ss_pred CCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceE--EEE--eeEEEEeecccCCCeeEE
Q psy3045 13 APTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRV--KQV--SGTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 13 ~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~--~~~--~~~l~i~~~~~~d~G~Y~ 84 (267)
||.|........+.+.+|+++.|.|.+.+ +.|+|++.... ...++ ... ..+|.|.++..+|+|.|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~p~~~v~W~k~g~~i~------~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~ 77 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDREDAPVRWYKDGQEVE------ESDFVVLENEGPHRRLVLPATQPSDGGEFQ 77 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSCTTSCCEEEETTSCCC------CCSSCEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECCCCcEEEEEECCEEee------eeeeeeEEecCCeEEEEeCCCChhhcEEEE
Confidence 56665554323456679999999999977 99999743221 12222 222 247999999999999999
Q ss_pred EEEEc
Q psy3045 85 CVVNN 89 (267)
Q Consensus 85 C~~~~ 89 (267)
|.|.|
T Consensus 78 C~a~n 82 (91)
T 2lvc_A 78 CVAGD 82 (91)
T ss_dssp EECSS
T ss_pred EEEcc
Confidence 99854
No 470
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=4.3e-12 Score=82.17 Aligned_cols=79 Identities=19% Similarity=0.381 Sum_probs=62.2
Q ss_pred CcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCC
Q psy3045 134 PLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQ 204 (267)
Q Consensus 134 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~ 204 (267)
++.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-- 84 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA-- 84 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--
Confidence 333444555678999999999999987 778899999998885432 23699999999999999999998
Q ss_pred CCceEEEEEEEec
Q psy3045 205 ESAQASGELKLGG 217 (267)
Q Consensus 205 ~~~~~~~~l~v~~ 217 (267)
...++.|.|..
T Consensus 85 --~~~~~~l~V~~ 95 (103)
T 2edf_A 85 --SKSTASLHVEE 95 (103)
T ss_dssp --CEEEEEEEECC
T ss_pred --CCcEEEEEEeC
Confidence 25566677754
No 471
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.35 E-value=1.9e-12 Score=97.23 Aligned_cols=119 Identities=14% Similarity=0.297 Sum_probs=78.7
Q ss_pred EEEecCCCEEEEeEeCCCC----CceEEEEECCc--cC------C------C---------------------CCCCeEE
Q psy3045 144 QTIDFGRPAQFTCKYEGNP----VKTISWMKDGK--PV------P------D---------------------HNEPVFR 184 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p----~~~~~W~~~~~--~~------~------~---------------------~~~~~l~ 184 (267)
..+.+|++++|.|.+.+.+ ...+.|++... .+ . . .....|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 89 (239)
T 3tv3_H 10 TLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLK 89 (239)
T ss_dssp SEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEE
T ss_pred EEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEE
Confidence 3788899999999987654 44899998421 10 0 0 1123599
Q ss_pred eccCCCCCCeEEEEEEEcCCC-------------CceEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeecC-C
Q psy3045 185 IDSVRKEDKGMYQCVIRNEQE-------------SAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGN-P 249 (267)
Q Consensus 185 i~~~~~~d~g~y~C~~~~~~~-------------~~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p 249 (267)
|.+++.+|+|.|.|.+.+..+ .......+.|. ....+|.+........+..|+.+.|.|.+.+. |
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 169 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeC
Confidence 999999999999999986531 01112245553 22345666644444455679999999999984 4
Q ss_pred CC-cEEEEECCEEc
Q psy3045 250 TP-EISWYLDGKKL 262 (267)
Q Consensus 250 ~~-~i~W~~~~~~l 262 (267)
++ .+.|+++|..+
T Consensus 170 ~~~~v~W~~~g~~~ 183 (239)
T 3tv3_H 170 EPVTVSWNSGALTS 183 (239)
T ss_dssp SCCEEEEGGGTBCT
T ss_pred CCeEEEEEECCccC
Confidence 44 58899998643
No 472
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=5.3e-12 Score=81.86 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=62.7
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCC
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDS 80 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~ 80 (267)
..+|.|...+ .+..+.+|++++|.|.+.+ +.|++++.... ...++.. ...+|.|.+++.+|+
T Consensus 6 ~~p~~~~~~~--~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~------~~~r~~~~~~~~~~~L~I~~v~~~D~ 77 (104)
T 2eny_A 6 SGHVGITKRL--KTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVG------SSSRFQATRQGRKYILVVREAAPSDA 77 (104)
T ss_dssp CCCCCCSBCC--CCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCS------BCSSCEEEEETTEEEEEECSCCTTTC
T ss_pred cCCCEEEecC--CCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECC------CCCCEEEEEcCCEEEEEECCCCHHHC
Confidence 3457787777 7899999999999999886 88999643221 1222222 234799999999999
Q ss_pred eeEEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 81 GKYLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 81 G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|.|+|.+.+ ......|.|..++.
T Consensus 78 G~Y~C~a~~----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 78 GEVVFSVRG----LTSKASLIVRERSG 100 (104)
T ss_dssp SCEEEEETT----EEEEECEEEECCCS
T ss_pred EEEEEEECC----eeEEEEEEEeCCCc
Confidence 999999843 45677888877543
No 473
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.35 E-value=1.9e-12 Score=96.67 Aligned_cols=117 Identities=13% Similarity=0.275 Sum_probs=73.8
Q ss_pred EEecCCCEEEEeEeCCCC--Cce--EEEEECCc--cC--------CC----------------------CCCCeEEeccC
Q psy3045 145 TIDFGRPAQFTCKYEGNP--VKT--ISWMKDGK--PV--------PD----------------------HNEPVFRIDSV 188 (267)
Q Consensus 145 ~~~~g~~v~l~C~~~~~p--~~~--~~W~~~~~--~~--------~~----------------------~~~~~l~i~~~ 188 (267)
.+.+|++++|.|...+.+ ... +.|++... .. .. .....|.|.++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 90 (232)
T 3qhz_H 11 LVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNM 90 (232)
T ss_dssp EECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred EECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcC
Confidence 688899999999987542 233 49997421 00 00 11235999999
Q ss_pred CCCCCeEEEEEEEcCC--------CCceEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeecCCCC--cEEEEE
Q psy3045 189 RKEDKGMYQCVIRNEQ--------ESAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP--EISWYL 257 (267)
Q Consensus 189 ~~~d~g~y~C~~~~~~--------~~~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~ 257 (267)
+.+|+|.|.|.+.+.. ........+.|. ....+|.+........+..|+.+.|.|.+.+.+++ .+.|++
T Consensus 91 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~ 170 (232)
T 3qhz_H 91 DPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (232)
T ss_dssp CGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEE
Confidence 9999999999998752 111223345554 22346666643334456679999999999985543 688999
Q ss_pred CCEE
Q psy3045 258 DGKK 261 (267)
Q Consensus 258 ~~~~ 261 (267)
+|..
T Consensus 171 ~g~~ 174 (232)
T 3qhz_H 171 GALT 174 (232)
T ss_dssp GTBC
T ss_pred CCEe
Confidence 9864
No 474
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=3.6e-12 Score=82.53 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=64.0
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEE----eeEEEEeecccCCCee
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQV----SGTLIIKEAKVEDSGK 82 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~ 82 (267)
..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++... ....++... ...|.|.+++.+|+|.
T Consensus 6 ~~pp~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~~------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 77 (103)
T 2edf_A 6 SGPAAIIKPL--EDQWVAPGEDVELRCELSRAGTPVHWLKDRKAI------RKSQKYDVVCEGTMAMLVIRGASLKDAGE 77 (103)
T ss_dssp CCCCCEEECC--CCEEECTTSCEEECCEESSSSCCCCEEESSCBC------CCSSSEEEEEETTEEEEEESSCCTTTCSE
T ss_pred CCCcEEEecC--CccEEcCCCCEEEEEEEeCCCCcEEEEECCEEc------cCCCCEEEEECCCEEEEEECCCCcccCEE
Confidence 3467887777 6899999999999999987 9999964322 122233322 3479999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEEeccc
Q psy3045 83 YLCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|+|.+.| ....+.|.|...+.
T Consensus 78 Y~C~a~n----~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 78 YTCEVEA----SKSTASLHVEEKAS 98 (103)
T ss_dssp EEEECSS----CEEEEEEEECCCSS
T ss_pred EEEEEcc----CCcEEEEEEeCCCC
Confidence 9999988 36677777776554
No 475
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.35 E-value=2.1e-12 Score=102.92 Aligned_cols=102 Identities=18% Similarity=0.289 Sum_probs=63.2
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVET 98 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 98 (267)
.++.+.+|+++.|.|.+.+ +.|++++..... ......++...+++|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 254 ~~v~v~~G~~~~l~C~~~gp~p~i~W~~~~~~~~~--~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 331 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVL--SQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSV 331 (361)
T ss_dssp CCCEEETTCCEEECCCCSSTTCEEEEECTTSCBCC--SCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSCEEEEEE
T ss_pred cCceecCCCeEEEEeEeeCCCCeEEEEeCCCeeEe--ecccCCceEeecCeEEEeecCcccCEEEEEEEecCCCccEEEE
Confidence 5679999999999999987 999995332111 1112234444667899999999999999999999988888888
Q ss_pred EEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceE
Q psy3045 99 VLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTI 166 (267)
Q Consensus 99 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~ 166 (267)
.+.|... ...|+.+.|.|.+.|.|.|.+
T Consensus 332 ~l~V~~~----------------------------------------~~~g~~~~l~C~~~g~P~P~i 359 (361)
T 2xot_A 332 ELKVYNF----------------------------------------TLHGHHDTLNAAADPWSHPQF 359 (361)
T ss_dssp EEEEESS----------------------------------------CCC------------------
T ss_pred EEEEEee----------------------------------------eccCCceEEEEEeCCCCCCcc
Confidence 8888542 134778999999999988865
No 476
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.34 E-value=2.4e-12 Score=97.19 Aligned_cols=119 Identities=15% Similarity=0.319 Sum_probs=76.1
Q ss_pred eEEEecCCCEEEEeEeCCC--CCceEEEEECCcc--C------C-C---------------------CCCCeEEeccCCC
Q psy3045 143 VQTIDFGRPAQFTCKYEGN--PVKTISWMKDGKP--V------P-D---------------------HNEPVFRIDSVRK 190 (267)
Q Consensus 143 ~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~~--~------~-~---------------------~~~~~l~i~~~~~ 190 (267)
...+.+|++++|.|...+. +...+.|++.... + . . .....|.|.+++.
T Consensus 8 ~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (248)
T 3u2s_H 8 GGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRV 87 (248)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCH
Confidence 3478899999999998753 3568999974211 0 0 0 0123599999999
Q ss_pred CCCeEEEEEEEcCCC----------------------CceEEEEEEEe-cccCCCeeecCCceeEEecCCcEEEEEEeec
Q psy3045 191 EDKGMYQCVIRNEQE----------------------SAQASGELKLG-GRFDPPVIKESFSDETLNPGPNYYFKCIASG 247 (267)
Q Consensus 191 ~d~g~y~C~~~~~~~----------------------~~~~~~~l~v~-~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 247 (267)
+|+|.|.|.+.+..+ .......+.|. ....+|.+........+..|+.+.|.|.+.+
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~ 167 (248)
T 3u2s_H 88 EDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 167 (248)
T ss_dssp GGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEEEE
T ss_pred HHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEEee
Confidence 999999999986410 11112345554 2234566664444445567999999999997
Q ss_pred C-C-CCcEEEEECCEE
Q psy3045 248 N-P-TPEISWYLDGKK 261 (267)
Q Consensus 248 ~-p-~~~i~W~~~~~~ 261 (267)
. | ++.+.|+++|..
T Consensus 168 ~~P~~~~v~W~~~g~~ 183 (248)
T 3u2s_H 168 YFPEPVTVSWNSGALT 183 (248)
T ss_dssp EBSSCCEEEEGGGTBC
T ss_pred EECCCeEEEEeECCcc
Confidence 4 4 247999999864
No 477
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.34 E-value=9.7e-12 Score=80.03 Aligned_cols=86 Identities=19% Similarity=0.310 Sum_probs=63.2
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCe
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSG 81 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G 81 (267)
+..+|.|...+. ....+.+|+++.|.|.+.. +.|++++.... ...++.. ....|.|.+++.+|+|
T Consensus 4 g~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~p~~~v~W~k~g~~i~------~~~~~~~~~~~~~~~L~I~~~~~~D~G 76 (100)
T 2yuv_A 4 GSSGAAFAKILD-PAYQVDKGGRVRFVVELADPKLEVKWYKNGQEIR------PSTKYIFEHKGCQRILFINNCQMTDDS 76 (100)
T ss_dssp SSSSCCEEECCC-SCEEECTTEEEEEEEEESCTTSCEEEEESSCBCC------CBTTEEEEEETTEEEEEEEEECTTTCC
T ss_pred CCCCCeEEecCC-CccEEcCCCcEEEEEEecCCCceEEEEECCEECC------CCCCEEEEecCCEEEEEEcCCCcCcCE
Confidence 446788987772 2378999999999999876 99999643221 1223222 1247999999999999
Q ss_pred eEEEEEEcCCCccEEEEEEEEEecc
Q psy3045 82 KYLCVVNNSVGGESVETVLTVTAPL 106 (267)
Q Consensus 82 ~Y~C~~~~~~~~~~~~~~l~V~~~~ 106 (267)
.|+|.+ +.......|.|..++
T Consensus 77 ~Y~C~a----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 77 EYYVTA----GDEKCSTELFVRSGP 97 (100)
T ss_dssp EEEEEE----TTEEEEEEEEECCSC
T ss_pred EEEEEE----CCceEEEEEEEecCC
Confidence 999999 556777788887654
No 478
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.34 E-value=1.5e-11 Score=78.39 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=58.7
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEE--E--EeeEEEEeecccCCCee
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVK--Q--VSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~--~--~~~~l~i~~~~~~d~G~ 82 (267)
...|.|...+ .+..+.+|+++.|.|.+.. +.|++++... . ...++. . ...+|.|.+++.+|+|.
T Consensus 6 ~~~~~~~~~~--~~~~v~~G~~v~l~C~~~~p~~~v~W~k~~~~l--~----~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 77 (95)
T 2k1m_A 6 KPVSAFSKKP--RSVEVAAGSPAVFEAETERAGVKVRWQRGGSDI--S----ASNKYGLATEGTRHTLTVREVGPADQGS 77 (95)
T ss_dssp CCCCCCSBCC--CCEEEETTSCEEEEEECSSSSCCCEEECSSSEE--C----SSTTCEEEEETTEEEEEESSCCTTCCSE
T ss_pred CCCCeeEeCC--CcEEEeCCCcEEEEEEeCCCCCeEEEEECCEEC--C----CCCcEEEEEcCCEEEEEEcCCCcccCEE
Confidence 3457888777 7899999999999999944 9999963321 1 112222 1 22479999999999999
Q ss_pred EEEEEEcCCCccEEEEEEEEE
Q psy3045 83 YLCVVNNSVGGESVETVLTVT 103 (267)
Q Consensus 83 Y~C~~~~~~~~~~~~~~l~V~ 103 (267)
|+|.+ |.......|.|.
T Consensus 78 Y~C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 78 YAVIA----GSSKVKFDLKVI 94 (95)
T ss_dssp EEEEE----TTEEEEEEEEEE
T ss_pred EEEEE----CCceEEEEEEEe
Confidence 99999 445566666664
No 479
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.33 E-value=3.6e-12 Score=86.91 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=60.0
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcce----------------------eccc-cCCceEEE--E--eeEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSR----------------------KVAV-PLNDRVKQ--V--SGTL 70 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~----------------------~~~~-~~~~~~~~--~--~~~l 70 (267)
..+.+.+|+++.|.|.+.+ +.|++++..... ...+ ....++.. . ...|
T Consensus 26 ~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L 105 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF 105 (139)
T ss_dssp CEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred CCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEE
Confidence 6899999999999999999 999997510000 0011 12223322 1 2479
Q ss_pred EEeecccCCCeeEEEEEEcCCCccEEEEEEEEE
Q psy3045 71 IIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103 (267)
Q Consensus 71 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 103 (267)
.|.+++..|+|.|+|.|.|..|.....+.|.|.
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999999988888887774
No 480
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=5.7e-12 Score=81.75 Aligned_cols=69 Identities=16% Similarity=0.330 Sum_probs=56.7
Q ss_pred EEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC---------CCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEE
Q psy3045 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214 (267)
Q Consensus 144 ~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 214 (267)
..+.+|+.+.|.|.+.+.|.+ +.|++++..+... ....|.|.++..+|+|.|+|.+.|..+ .+.+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~----~~~l~ 94 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA----FFGVT 94 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC----CEEEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE----EEEEE
Confidence 578899999999999999888 9999999887643 234799999999999999999998743 44555
Q ss_pred Eec
Q psy3045 215 LGG 217 (267)
Q Consensus 215 v~~ 217 (267)
|..
T Consensus 95 V~~ 97 (104)
T 2e6p_A 95 VQD 97 (104)
T ss_dssp EEC
T ss_pred EcC
Confidence 653
No 481
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.33 E-value=5e-12 Score=83.00 Aligned_cols=81 Identities=27% Similarity=0.503 Sum_probs=62.1
Q ss_pred cccccCCceEEEecCCCEEEEeEeCCC--CCceEEEEECCccCCCCC-----------------CCeEEeccCCCCCCeE
Q psy3045 135 LAAGVEPTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDGKPVPDHN-----------------EPVFRIDSVRKEDKGM 195 (267)
Q Consensus 135 ~~~~~~~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~~~~~~~-----------------~~~l~i~~~~~~d~g~ 195 (267)
+.+...+....+.+|+.+.|.|.+.+. +.+.+.|++++..+.... ...|.|.++..+|+|.
T Consensus 11 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 90 (112)
T 3so5_A 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGX 90 (112)
T ss_dssp CEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEE
T ss_pred CeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCe
Confidence 334444556688999999999998854 467999999998775431 3689999999999999
Q ss_pred EEEEEEcCCCCc-eEEEEEEE
Q psy3045 196 YQCVIRNEQESA-QASGELKL 215 (267)
Q Consensus 196 y~C~~~~~~~~~-~~~~~l~v 215 (267)
|+|.|.|..|.. ...+.|.|
T Consensus 91 Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 91 YQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEeCCCcEEEeEEEEEe
Confidence 999999988763 34444443
No 482
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.32 E-value=3.5e-11 Score=85.70 Aligned_cols=119 Identities=15% Similarity=0.193 Sum_probs=82.2
Q ss_pred CceEEEecCCCEEEEeEeCCCCCceEEEEE--CCccC-CC-CCCCeEEeccCCCCCCeEEEEEEEcCCCCceEEEEEEEe
Q psy3045 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMK--DGKPV-PD-HNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216 (267)
Q Consensus 141 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~--~~~~~-~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 216 (267)
+....+.+|+++.|.|.+....+..+.|.- ++..+ .. .....|.|.+++. .|.|.|.+.......+....+.|.
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~--~g~y~C~~~c~~~~~~~~~~l~V~ 83 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQE--DSQPMCYSNCPDGQSTAKTFLTVY 83 (185)
T ss_dssp SSEEEEETTEEEEEEEEECSSSCSEEEEECSSCEEEECSSSSSEEEEEEEEECS--CBCCEEEEECSSCEEEEECEEEEE
T ss_pred CCCcEEeCCCCEEEEEEccCCCCccceEEeeCCCccEeccCCceeEEEEEecCc--CCEEEEEEECCCCceEEEEEEEEe
Confidence 344578999999999998643333466642 11112 11 1225688888873 399999997765555556666665
Q ss_pred cccCCCeeecCCceeEEecCCcEEEEEEeecCCCC---cEEEEECCEEcC
Q psy3045 217 GRFDPPVIKESFSDETLNPGPNYYFKCIASGNPTP---EISWYLDGKKLV 263 (267)
Q Consensus 217 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~~~~l~ 263 (267)
. .|..+.+.+....+.+|+.++|.|.+.|..++ .|.|||+++.+.
T Consensus 84 ~--~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~ 131 (185)
T 1iam_A 84 W--TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELK 131 (185)
T ss_dssp B--CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEE
T ss_pred C--CCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcc
Confidence 3 45556666655568999999999999985554 489999999875
No 483
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=84.78 Aligned_cols=89 Identities=21% Similarity=0.228 Sum_probs=60.4
Q ss_pred ccCCCcccCCCCceeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeE
Q psy3045 10 GFKAPTFSSVSDIIRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 10 ~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 83 (267)
...||.|...+ .+..+.+|+++.|.|.+.+ +.|++++............-++.. ....|.|.++..+|+|.|
T Consensus 5 ~~~p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 5 SSGPVLIVTPL--EDQQVFVGDRVEMAVEVSEEGAQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCCCCCEEECC--CCEEEESSCCCBCCEEESCSSCCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBE
T ss_pred ccCCCEEEecC--CceEEcCCCCEEEEEEEeCCCCEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEE
Confidence 34567888777 6899999999999999988 999996432211110000112222 234799999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEe
Q psy3045 84 LCVVNNSVGGESVETVLTVTA 104 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~ 104 (267)
+|.+.| ......|.|.+
T Consensus 83 ~C~a~n----~~~~~~l~V~~ 99 (101)
T 2edk_A 83 QVITNG----GQCEAELIVEE 99 (101)
T ss_dssp EEECSS----CEECCBEEEEC
T ss_pred EEEEcC----CcEEEEEEEeC
Confidence 999976 33444566654
No 484
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.32 E-value=5.9e-12 Score=82.00 Aligned_cols=78 Identities=26% Similarity=0.312 Sum_probs=60.9
Q ss_pred ccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 136 AAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 136 ~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+.... ...|.|.++..+|+|.|+|.|.|..
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~-- 86 (106)
T 2dlt_A 10 EVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYA-- 86 (106)
T ss_dssp CEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSC--
T ss_pred EEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCC--
Confidence 34445566789999999999999988877 99999998876432 2479999999999999999999983
Q ss_pred ceEEEEEEEe
Q psy3045 207 AQASGELKLG 216 (267)
Q Consensus 207 ~~~~~~l~v~ 216 (267)
...+..+.|.
T Consensus 87 ~~~~~~l~V~ 96 (106)
T 2dlt_A 87 LSLSAKLNFL 96 (106)
T ss_dssp CCCCBCEEEE
T ss_pred ceEEEEEEEE
Confidence 3334445543
No 485
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.32 E-value=1.4e-11 Score=78.84 Aligned_cols=76 Identities=20% Similarity=0.347 Sum_probs=59.5
Q ss_pred eeEEecCCCeEEEEEEecc------eeeeecccCcceeccccCCceEEE--E--eeEEEEeecccCCCeeEEEEEEcCCC
Q psy3045 23 IRFKKPGGESFALLCEAQE------NMWFKFIEGSSRKVAVPLNDRVKQ--V--SGTLIIKEAKVEDSGKYLCVVNNSVG 92 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~------~~W~~~~~~~~~~~~~~~~~~~~~--~--~~~l~i~~~~~~d~G~Y~C~~~~~~~ 92 (267)
.+..+.+|+++.|.|.+.+ +.|++++.. +....++.. . ...|.|.+++.+|+|.|+|.+.|..|
T Consensus 9 ~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~------~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 9 MHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQ------LENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CCEEECTTCCEEEEEEEESCCTTCEEEEEETTEE------CCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred cCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEE------CcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 6889999999999999885 999996331 112233322 2 23899999999999999999999999
Q ss_pred ccEEEEEEEEEe
Q psy3045 93 GESVETVLTVTA 104 (267)
Q Consensus 93 ~~~~~~~l~V~~ 104 (267)
.....+.|.|.+
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 888888887754
No 486
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.32 E-value=2e-11 Score=79.73 Aligned_cols=84 Identities=25% Similarity=0.288 Sum_probs=62.8
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc---eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCeeE
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y 83 (267)
..||.|...+ .+..+.+|+++.|.|.+.+ +.|++++... ....++.. ....|.|.+++.+|+|.|
T Consensus 6 ~~pp~~~~~~--~~~~v~~G~~v~l~C~~~~~p~v~W~k~~~~~------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (108)
T 2dm7_A 6 SGPARFTQDL--KTKEASEGATATLQCELSKVAPVEWKKGPETL------RDGGRYSLKQDGTRCELQIHDLSVADAGEY 77 (108)
T ss_dssp CCCCCBCSCC--BCCEEETTSCEEEEEEBSSSCCCEEESSSSBC------CSSSSCEEEEETTEEEEEESSCCTTTCSEE
T ss_pred CCCCeeeecC--CcEEEeCCCcEEEEEEeCCCCeeEEEECCEEC------CCCCCEEEEecCCEEEEEECCCCcccCEEE
Confidence 4578898877 7899999999999999988 9999964321 11223222 123699999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEecc
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPL 106 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~ 106 (267)
+|.+. .......|.|...+
T Consensus 78 ~C~a~----n~~~~~~l~V~~~p 96 (108)
T 2dm7_A 78 SCMCG----QERTSATLTVRALP 96 (108)
T ss_dssp EEEET----TEEEEEECEEECCC
T ss_pred EEEEc----CCEEEEEEEEecCC
Confidence 99993 34666777777644
No 487
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.32 E-value=6.4e-12 Score=82.47 Aligned_cols=90 Identities=20% Similarity=0.358 Sum_probs=63.4
Q ss_pred cCCCcccCCCCceeEEecCCCeEEEEEEecc-------eeeeecccCcceec-----cccC-CceEEEEeeEEEEeeccc
Q psy3045 11 FKAPTFSSVSDIIRFKKPGGESFALLCEAQE-------NMWFKFIEGSSRKV-----AVPL-NDRVKQVSGTLIIKEAKV 77 (267)
Q Consensus 11 ~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~~~-----~~~~-~~~~~~~~~~l~i~~~~~ 77 (267)
..+|.|...+ ....+.+|++++|.|.+.+ +.|++++....... .... ..........|.|.+++.
T Consensus 8 ~~~P~i~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 8 FPXPQITVQP--ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp CCSCEEEECC--CCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCeEEeCC--CCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccc
Confidence 3468888877 6789999999999999883 89999643211100 0000 011122347899999999
Q ss_pred CCCeeEEEEEEcCCCc-cEEEEEEEE
Q psy3045 78 EDSGKYLCVVNNSVGG-ESVETVLTV 102 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~-~~~~~~l~V 102 (267)
.|+|.|+|.+.|..|. .+..+.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999999887 445666655
No 488
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2.6e-12 Score=82.05 Aligned_cols=82 Identities=23% Similarity=0.319 Sum_probs=61.1
Q ss_pred ccccCCCcccCCCCceeEEecCCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCee
Q psy3045 8 PVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGK 82 (267)
Q Consensus 8 ~~~~~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 82 (267)
+.+..+|.|...+ ....+.+|+++.|.|.+.+ +.|++++.... .. .+..|.|.+++.+|+|.
T Consensus 5 ~~~~~~~~i~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~------~~-----~~~~L~i~~v~~~d~G~ 71 (96)
T 2ens_A 5 SSGLEEVQLVVEP--EGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLP------LP-----PSPVLILPEIGPQDQGT 71 (96)
T ss_dssp CCCCCSCCCEEES--TTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCS------SC-----CCSEEEEESCCTTTCEE
T ss_pred CCCCCCCEEEECC--CCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECc------CC-----CCCEEEECCCCcccCEE
Confidence 3456678888777 6778999999999999987 99999633211 11 24589999999999999
Q ss_pred EEEEEEcCCCccE--EEEEEEE
Q psy3045 83 YLCVVNNSVGGES--VETVLTV 102 (267)
Q Consensus 83 Y~C~~~~~~~~~~--~~~~l~V 102 (267)
|+|.+.|..+... ..+.|.|
T Consensus 72 Y~C~a~n~~~~~~~s~~~~v~V 93 (96)
T 2ens_A 72 YSCVATHSSHGPQESRAVSISI 93 (96)
T ss_dssp EECEECCSSCCCEECCCEEEEE
T ss_pred EEEEEEeCCCCcEEEEEEEEEE
Confidence 9999999766533 3344444
No 489
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6e-12 Score=83.23 Aligned_cols=76 Identities=17% Similarity=0.302 Sum_probs=60.5
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC----------CCCeEEeccCCCCCCeEEEEEEEcCCCC
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH----------NEPVFRIDSVRKEDKGMYQCVIRNEQES 206 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 206 (267)
+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..+ ....|.|.++..+|+|.|+|.+ +.
T Consensus 16 ~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~ 91 (115)
T 2cr6_A 16 IIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GD 91 (115)
T ss_dssp EEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TT
T ss_pred EeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CC
Confidence 334455668999999999999999998999999999876432 2347999999999999999994 44
Q ss_pred ceEEEEEEEe
Q psy3045 207 AQASGELKLG 216 (267)
Q Consensus 207 ~~~~~~l~v~ 216 (267)
...++.|.|.
T Consensus 92 ~~~~~~L~V~ 101 (115)
T 2cr6_A 92 QRASAALRVT 101 (115)
T ss_dssp EECCEEEEEE
T ss_pred eeEEEEEEEE
Confidence 4556677776
No 490
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=5.2e-12 Score=81.17 Aligned_cols=78 Identities=19% Similarity=0.374 Sum_probs=62.1
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEEEeeEEEEeecccCCCeeEEEEEEcCCCccEEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVET 98 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 98 (267)
..+.+.+|+++.|.|.+.+ +.|++++.. +....++...+..|.|.+++..|+|.|+|.+.|..|.....+
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~pp~i~W~k~g~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 84 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDVQSINWLRDGVQ------LAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYF 84 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSCCEEEEEESSSB------CCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCCCeEEEEECCEE------CCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEE
Confidence 6778999999999999987 999996421 222334444567899999999999999999999998887777
Q ss_pred EEEEEecc
Q psy3045 99 VLTVTAPL 106 (267)
Q Consensus 99 ~l~V~~~~ 106 (267)
.|.|...+
T Consensus 85 ~l~V~~~~ 92 (99)
T 2cr3_A 85 SVNVSDAL 92 (99)
T ss_dssp EECBCSCC
T ss_pred EEEEecCC
Confidence 77776543
No 491
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.6e-12 Score=82.90 Aligned_cols=78 Identities=21% Similarity=0.377 Sum_probs=60.3
Q ss_pred CcccccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC-------------CCeEEeccCCCCCCeEEEEEE
Q psy3045 134 PLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN-------------EPVFRIDSVRKEDKGMYQCVI 200 (267)
Q Consensus 134 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~-------------~~~l~i~~~~~~d~g~y~C~~ 200 (267)
++.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+.... ...|.|.++..+|+|.|+|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 33344455567899999999999999888 8999999998876543 136999999999999999999
Q ss_pred EcCCCCceEEEEEEEe
Q psy3045 201 RNEQESAQASGELKLG 216 (267)
Q Consensus 201 ~~~~~~~~~~~~l~v~ 216 (267)
.|. ..+..+.|.
T Consensus 87 ~n~----~~~~~l~V~ 98 (101)
T 2edk_A 87 NGG----QCEAELIVE 98 (101)
T ss_dssp SSC----EECCBEEEE
T ss_pred cCC----cEEEEEEEe
Confidence 872 334445554
No 492
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.31 E-value=2e-11 Score=80.41 Aligned_cols=84 Identities=29% Similarity=0.362 Sum_probs=63.7
Q ss_pred CCCcccCCCCceeEEecCCCeEEEEEEecc---eeeeecccCcceeccccCCceEEEE-e---eEEEEeecccCCCeeEE
Q psy3045 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQV-S---GTLIIKEAKVEDSGKYL 84 (267)
Q Consensus 12 ~~P~~~~~~~~~~~~v~~g~~v~l~C~~~~---~~W~~~~~~~~~~~~~~~~~~~~~~-~---~~l~i~~~~~~d~G~Y~ 84 (267)
.||.|...+ .+..+.+|+++.|.|.+.+ +.|++++... ....++... + ..|.|.+++.+|+|.|+
T Consensus 18 ~pp~~~~~~--~~~~v~~G~~v~l~C~~~~~p~v~W~k~~~~l------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
T 2edh_A 18 LPIKFTEGL--RNEEATEGATAVLRCELSKMAPVEWWKGHETL------RDGDRHSLRQDGARCELQIRGLVAEDAGEYL 89 (113)
T ss_dssp SCCCEEECC--CCCEECTTSCEEEEEEESSCCCCEEEESSSBC------CCSSSEEEEEETTEEEEEECSCCSTTCEEEE
T ss_pred CCCcccccC--CceEEeCCCeEEEEEEECCCCcEEEEECCEEC------CCCCcEEEEECCCEEEEEECCCChhhCEEEE
Confidence 356887766 6889999999999999988 9999964321 222333322 2 37999999999999999
Q ss_pred EEEEcCCCccEEEEEEEEEeccc
Q psy3045 85 CVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 85 C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
|.+ +.......|.|...+.
T Consensus 90 C~a----~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 90 CMC----GKERTSAMLTVRAMPS 108 (113)
T ss_dssp EEE----TTEEEEEEEEECCCCC
T ss_pred EEe----CCCCEEEEEEEeCCCC
Confidence 999 5667778888876554
No 493
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.5e-11 Score=79.64 Aligned_cols=81 Identities=14% Similarity=0.229 Sum_probs=63.3
Q ss_pred CCcccccCCceEEEecCCCEEEEeEeCCCCC-ceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEc
Q psy3045 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPV-KTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 133 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
++..+...+....+.+|+.+.|.|.+.+.|. +.+.|+++|..+..+. ...|.|.++..+|+|.|+|.+.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 3444555666778999999999999998774 4899999999886432 24799999999999999999854
Q ss_pred CCCCceEEEEEEEec
Q psy3045 203 EQESAQASGELKLGG 217 (267)
Q Consensus 203 ~~~~~~~~~~l~v~~ 217 (267)
...++.|.|..
T Consensus 87 ----~~~~a~L~V~~ 97 (104)
T 2eny_A 87 ----LTSKASLIVRE 97 (104)
T ss_dssp ----EEEEECEEEEC
T ss_pred ----eeEEEEEEEeC
Confidence 35667777763
No 494
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.30 E-value=4.9e-12 Score=78.40 Aligned_cols=72 Identities=24% Similarity=0.404 Sum_probs=53.3
Q ss_pred eeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEE----EeeEEEEeecccCCCeeEEEEEEcCCCcc
Q psy3045 23 IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQ----VSGTLIIKEAKVEDSGKYLCVVNNSVGGE 94 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (267)
.++.+.+|+++.|.|.+.+ +.|+|++.. +....++.. ....|.|.+++.+|+|.|+|.|.+ .
T Consensus 4 t~v~~~~G~~v~l~C~vs~p~p~v~W~k~g~~------l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~ 73 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSGPGGPVRWYKDGER------LASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----D 73 (84)
T ss_dssp CCEEECTTSCEEEECCCSCCSTTCEEEETTEE------CCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----T
T ss_pred eEEEEecCCCEEEEEEECCCCcEEEEEECCEE------ccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----E
Confidence 5789999999999999977 999996432 122233322 234799999999999999999743 4
Q ss_pred EEEEEEEEEe
Q psy3045 95 SVETVLTVTA 104 (267)
Q Consensus 95 ~~~~~l~V~~ 104 (267)
...+.|.|.+
T Consensus 74 ~~~a~l~V~e 83 (84)
T 2lu7_A 74 SRIFLVSVEE 83 (84)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEEEC
Confidence 5666777654
No 495
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.30 E-value=4.4e-11 Score=104.07 Aligned_cols=177 Identities=17% Similarity=0.199 Sum_probs=109.3
Q ss_pred CCCeEEEEEEecc-----eeeeecccCcceeccccCCceEEEEeeEEEEeecccC-CCeeEEEEEEcCCCccEEEEEEEE
Q psy3045 29 GGESFALLCEAQE-----NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVE-DSGKYLCVVNNSVGGESVETVLTV 102 (267)
Q Consensus 29 ~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~~~~~~l~V 102 (267)
.+.++.|.|.+.+ +.|.+++.... . .....+.|..+... .++.|.|.+.+..|..... .+.+
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~-------~----~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~ 157 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTR-------T----WNRAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKV 157 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCS-------S----CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEE
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCC-------c----eeEEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEe
Confidence 3568999999988 99999643211 0 01224555544222 2478888776666542211 1112
Q ss_pred EeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEeCCCCCceEE-EE--ECCccCCCC-
Q psy3045 103 TAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTIS-WM--KDGKPVPDH- 178 (267)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~-W~--~~~~~~~~~- 178 (267)
..... . .+|. +. .+.+..+..|+++.|.|.+.|.|.+.+. |+ +++..+...
T Consensus 158 ~~~~~-~----------------------~~p~-~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~ 212 (731)
T 2v5y_A 158 LGHPC-T----------------------RTPH-FL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE 212 (731)
T ss_dssp ESSCC-S----------------------SSCE-EC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE
T ss_pred eeccc-c----------------------cccc-cc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc
Confidence 11100 0 0111 11 2335588899999999999999988887 77 577665321
Q ss_pred --------CCCeEEeccCCCCCCeEEEEEEEcCCCC-ceEEEEEEEecccCCCeeecCCceeEEecCCcEEEEEEee
Q psy3045 179 --------NEPVFRIDSVRKEDKGMYQCVIRNEQES-AQASGELKLGGRFDPPVIKESFSDETLNPGPNYYFKCIAS 246 (267)
Q Consensus 179 --------~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 246 (267)
....|.|.++...|.|.|+|.|.|..|. ......+.+.. +|.....+... ......+.|.|...
T Consensus 213 ~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~---~P~~~~~p~~~-~~~~~~v~l~w~~~ 285 (731)
T 2v5y_A 213 IKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKE---PPVPIAPPQLA-SVGATYLWIQLNAN 285 (731)
T ss_dssp EEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEEC---CCCBSSCCEEE-EECSSCEEEECCCS
T ss_pred eEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEec---CCCCCCCccee-ccCCceEEEEeCCc
Confidence 1358999999999999999999999886 45556676653 44333333222 23456788888763
No 496
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.30 E-value=6.5e-12 Score=85.81 Aligned_cols=72 Identities=26% Similarity=0.494 Sum_probs=59.7
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCC----------------------CCCeEEeccCCCCCCe
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH----------------------NEPVFRIDSVRKEDKG 194 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~----------------------~~~~l~i~~~~~~d~g 194 (267)
+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|+|
T Consensus 24 ~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 103 (137)
T 3qr2_A 24 FVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTG 103 (137)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCE
T ss_pred EEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCE
Confidence 334455668889999999999999999999999988765321 2358999999999999
Q ss_pred EEEEEEEcCCCCce
Q psy3045 195 MYQCVIRNEQESAQ 208 (267)
Q Consensus 195 ~y~C~~~~~~~~~~ 208 (267)
.|+|.|.|..|...
T Consensus 104 ~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 104 TYECRASNDPDRNH 117 (137)
T ss_dssp EEEEEEECCTTSSS
T ss_pred EEEEEEEecCCccc
Confidence 99999999988764
No 497
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.30 E-value=3.7e-11 Score=76.48 Aligned_cols=75 Identities=20% Similarity=0.377 Sum_probs=58.9
Q ss_pred cccCCceEEEecCCCEEEEeEeCCCCCceEEEEECCccCCCCC---------CCeEEeccCCCCCCeEEEEEEEcCCCCc
Q psy3045 137 AGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN---------EPVFRIDSVRKEDKGMYQCVIRNEQESA 207 (267)
Q Consensus 137 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~---------~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 207 (267)
+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+..+. ...|.|.++..+|+|.|+|.+ +..
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~ 85 (95)
T 2k1m_A 11 FSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSS 85 (95)
T ss_dssp CSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTE
T ss_pred eEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCc
Confidence 3445566789999999999999 77888999999998875432 246999999999999999999 344
Q ss_pred eEEEEEEEe
Q psy3045 208 QASGELKLG 216 (267)
Q Consensus 208 ~~~~~l~v~ 216 (267)
..++.|.|.
T Consensus 86 ~~~~~l~V~ 94 (95)
T 2k1m_A 86 KVKFDLKVI 94 (95)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEe
Confidence 555666553
No 498
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.30 E-value=3.1e-10 Score=82.66 Aligned_cols=171 Identities=19% Similarity=0.257 Sum_probs=97.5
Q ss_pred eEEecCCCeEEEEEEecc-------eeeeecccCcce-------------eccccCCceEEEE------eeEEEEeeccc
Q psy3045 24 RFKKPGGESFALLCEAQE-------NMWFKFIEGSSR-------------KVAVPLNDRVKQV------SGTLIIKEAKV 77 (267)
Q Consensus 24 ~~~v~~g~~v~l~C~~~~-------~~W~~~~~~~~~-------------~~~~~~~~~~~~~------~~~l~i~~~~~ 77 (267)
...+.+|+++.|.|.+.+ +.|.+...+... ........|+... ...|.+.+++.
T Consensus 9 ~~lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~ 88 (254)
T 4f9p_D 9 AEVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTS 88 (254)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CceECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCC
Confidence 457899999999999988 788886433321 1112234454332 13588999999
Q ss_pred CCCeeEEEEEEcCCCccEEEEEEEEEeccccccCCceEEEeCCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeE
Q psy3045 78 EDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCK 157 (267)
Q Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 157 (267)
+|++.|+|........--.-+.++|..... ..+.......+ +.........+...+....+.+|+.++|.|.
T Consensus 89 eDTAvYYCAr~~~~d~WGqGT~VTVSSast--~~ps~~~l~~~------~sgGSgsdivltQsP~slsvs~G~~vtlsC~ 160 (254)
T 4f9p_D 89 DDSAVYFCARSDYGAYWGQGTLVTVSAAGG--GGSGGGGSGGG------GSGGGGSDIVLTQSPVTLSVTPGDSVSLSCR 160 (254)
T ss_dssp GGCEEEECEESSSCCEECCCEEEEECC---------------------------CCSCCEEEECSEEEECTTCEEEEEEE
T ss_pred CCCEEEEEEecCCCCCcCCCEEEEEeCCCC--cCCCCCCCccc------cccccccccccccCCceeEEcCCCcEeeEEE
Confidence 999999997643221111223444432111 00000000000 0000111122334456668899999999999
Q ss_pred eCCCCCceEEEEEC--CccCC---------------------CCCCCeEEeccCCCCCCeEEEEEEEc
Q psy3045 158 YEGNPVKTISWMKD--GKPVP---------------------DHNEPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 158 ~~~~p~~~~~W~~~--~~~~~---------------------~~~~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
++..-...+.||+. |+... .+...+|+|..++.+|.+.|.|...+
T Consensus 161 ~S~~~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~YYC~q~~ 228 (254)
T 4f9p_D 161 ASQSISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQSN 228 (254)
T ss_dssp ESSCCTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEEEEEECS
T ss_pred ccCcccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEEEEeecC
Confidence 87554446889873 22210 01224699999999999999997543
No 499
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=8.9e-12 Score=80.81 Aligned_cols=89 Identities=25% Similarity=0.297 Sum_probs=60.7
Q ss_pred cCCCcccCCCCc-eeEEecCCCeEEEEEEecc----eeeeecccCcceeccccCCceEEE--EeeEEEEeecccCCCeeE
Q psy3045 11 FKAPTFSSVSDI-IRFKKPGGESFALLCEAQE----NMWFKFIEGSSRKVAVPLNDRVKQ--VSGTLIIKEAKVEDSGKY 83 (267)
Q Consensus 11 ~~~P~~~~~~~~-~~~~v~~g~~v~l~C~~~~----~~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 83 (267)
..+|.+...+.. ..+.+.+|+++.|.|.+.+ +.|++++..... . ...++.. ....|.|.+++.+|+|.|
T Consensus 5 ~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~v~W~k~g~~~~~--~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 5 SSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEE--S--ELLVVKMDGRKHRLILPEAKVQDSGEF 80 (104)
T ss_dssp CSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCCCEEEETTEECCC--B--TTBEEEEETTEEEEEESSCCTTTCEEE
T ss_pred CCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCccEEeeCCEECCC--C--CCEEEEeCCCEEEEEECCCChhhCEEE
Confidence 446777666621 1278999999999999988 999996432111 1 1111221 235799999999999999
Q ss_pred EEEEEcCCCccEEEEEEEEEeccc
Q psy3045 84 LCVVNNSVGGESVETVLTVTAPLA 107 (267)
Q Consensus 84 ~C~~~~~~~~~~~~~~l~V~~~~~ 107 (267)
+|.+.|..+ .+.|.|.+++.
T Consensus 81 ~C~a~n~~~----~~~l~V~~~P~ 100 (104)
T 2e6p_A 81 ECRTEGVSA----FFGVTVQDPSG 100 (104)
T ss_dssp EEECSSCCC----CEEEEEECCCC
T ss_pred EEEECCceE----EEEEEEcCCCC
Confidence 999988643 45667766543
No 500
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.29 E-value=4e-11 Score=87.77 Aligned_cols=167 Identities=19% Similarity=0.320 Sum_probs=95.0
Q ss_pred eeEEecCCCeEEEEEEecc-----eeeeecccCcceecccc--------CCceEEE----EeeEEEEeecccCCCeeEEE
Q psy3045 23 IRFKKPGGESFALLCEAQE-----NMWFKFIEGSSRKVAVP--------LNDRVKQ----VSGTLIIKEAKVEDSGKYLC 85 (267)
Q Consensus 23 ~~~~v~~g~~v~l~C~~~~-----~~W~~~~~~~~~~~~~~--------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C 85 (267)
..+.+..|++|+|.|.... +.|++...+......+. ..+|+.. +..+|+|..++.+|++.|.|
T Consensus 9 ~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD~A~YyC 88 (259)
T 4f9l_D 9 SSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPEDIATYYC 88 (259)
T ss_dssp SBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred CeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhhCEEEEE
Confidence 5778899999999998755 88998755543322221 2234543 23479999999999999999
Q ss_pred EEEcCCCcc-EEEEEEEEEec---cccc-cCCceEEEe--CCCceEEEEEeecCCCcccccCCceEEEecCCCEEEEeEe
Q psy3045 86 VVNNSVGGE-SVETVLTVTAP---LAAG-VEPTVQTID--FGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKY 158 (267)
Q Consensus 86 ~~~~~~~~~-~~~~~l~V~~~---~~~~-~~~~~~~~~--~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 158 (267)
...+..... -.-+.|.|... +... ..+...... ....++| .+..-..+.+|++++|.|.+
T Consensus 89 ~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL-------------~eSG~~lvkPG~Sl~LSC~a 155 (259)
T 4f9l_D 89 QQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQL-------------QESGAELVKPGASVKLSCKA 155 (259)
T ss_dssp EECSSSSCCBCCCCEECBCCC----------------------CCCE-------------EEECCCEEESSSCEEEEEEE
T ss_pred eecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceE-------------EeECCCEECCCCcEEEEEee
Confidence 876443110 00112222210 0000 000000000 0001111 11112268889999999999
Q ss_pred CCCC--CceEEEEEC--CccC------C-C---------------------CCCCeEEeccCCCCCCeEEEEEEEc
Q psy3045 159 EGNP--VKTISWMKD--GKPV------P-D---------------------HNEPVFRIDSVRKEDKGMYQCVIRN 202 (267)
Q Consensus 159 ~~~p--~~~~~W~~~--~~~~------~-~---------------------~~~~~l~i~~~~~~d~g~y~C~~~~ 202 (267)
.|+. .-.+.|+|. |+-+ . . .+...|.+..++.+|.+.|.|....
T Consensus 156 SG~tfs~y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~~ 231 (259)
T 4f9l_D 156 SGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRED 231 (259)
T ss_dssp ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred eCCCcccCcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEeC
Confidence 9875 346889873 2221 1 0 0123577889999999999997543
Done!