RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3045
(267 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 61.4 bits (148), Expect = 5e-13
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSV 188
+E + + +F C GNP+ T+ W+K+GK + ++SV
Sbjct: 10 MEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESV 69
Query: 189 RKEDKGMYQCVIRNEQESAQASGELK 214
DKG Y CV+ NE S + L
Sbjct: 70 VPSDKGNYTCVVENEYGSINHTYHLD 95
Score = 40.2 bits (93), Expect = 2e-05
Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 28 PGGESFALLCEAQEN-----MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGK 82
P + C A N W K + ++ + Q +LI++ D G
Sbjct: 18 PAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH-WSLIMESVVPSDKGN 76
Query: 83 YLCVVNNSVGGESVETVLTV 102
Y CVV N G + L V
Sbjct: 77 YTCVVENEYGSINHTYHLDV 96
Score = 36.3 bits (83), Expect = 5e-04
Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 218 RFDPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAER 267
+ E + F+C A GNP P + W +GK+ R
Sbjct: 3 YWTNTEKMEK-RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHR 51
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 57.5 bits (138), Expect = 1e-11
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP---------DHNEPVFRIDSVRK 190
P Q + G + K G T +WMK K + N I + R+
Sbjct: 6 FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQ 65
Query: 191 EDKGMYQCVIRNEQESAQASGELKLGGRFDPP 222
E G Y ++ N+ S QA L + + DPP
Sbjct: 66 EHCGCYTLLVENKLGSRQAQVNLTVVDKPDPP 97
Score = 39.4 bits (91), Expect = 4e-05
Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 30 GESFALLCEAQ-----ENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84
GES L + W KF + + + + + L I A+ E G Y
Sbjct: 15 GESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENS--ENGSKLTILAARQEHCGCYT 72
Query: 85 CVVNNSVGGESVETVLTVTAP 105
+V N +G + LTV
Sbjct: 73 LLVENKLGSRQAQVNLTVVDK 93
Score = 34.1 bits (77), Expect = 0.004
Identities = 7/41 (17%), Positives = 15/41 (36%)
Query: 222 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262
P I + D+ + G + +G +W K++
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQI 41
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 55.5 bits (133), Expect = 6e-11
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Query: 132 SPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN----EPVFRIDS 187
S P V + G+ CK G P + W + KP+ + I
Sbjct: 1 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKG 60
Query: 188 VRKEDKGMYQCVIRNEQESAQASGELK 214
V+ DKG Y C NE ++
Sbjct: 61 VKNGDKGYYGCRATNEHGDKYFETLVQ 87
Score = 46.7 bits (110), Expect = 9e-08
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 13 APTFSSV-SDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLI 71
AP + +I K+ G+ + C+ + S R L+
Sbjct: 2 APKYEQKPEKVIVVKQ--GQDVTIPCKVTGLPAPNVV--WSHNAKPLSGGRATVTDSGLV 57
Query: 72 IKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
IK K D G Y C N G + ET++ V
Sbjct: 58 IKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
Score = 34.0 bits (77), Expect = 0.003
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 260
P ++ + G + C +G P P + W + K
Sbjct: 3 PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAK 42
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 53.8 bits (128), Expect = 3e-10
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 8/85 (9%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN--------EPVFRIDSVRK 190
PT Q G A C + TI W G+ V +I ++K
Sbjct: 6 NAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKK 65
Query: 191 EDKGMYQCVIRNEQESAQASGELKL 215
D+G Y+C R ++++
Sbjct: 66 TDEGTYRCEGRILARGEINFKDIQV 90
Score = 37.6 bits (86), Expect = 2e-04
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 14 PTFSSVSDIIRFKKPGGESFALLCEAQEN--MWFKFIEGSSRKVAVPLNDRVKQVSGTLI 71
F + FK+ GE ++C+ + + + + + L
Sbjct: 2 LMFKNAPTPQEFKE--GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ 59
Query: 72 IKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
I+ K D G Y C GE + V
Sbjct: 60 IRGIKKTDEGTYRCEGRILARGEINFKDIQVI 91
Score = 31.4 bits (70), Expect = 0.025
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 222 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 260
+ K + + + G + C + P I W G+
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 40
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 52.5 bits (125), Expect = 7e-10
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH---NEPVFRIDSVR 189
P P G+ C GNPV I W K +EP+ I +V
Sbjct: 4 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVD 63
Query: 190 KEDKGMYQCVIRNEQESAQASGEL 213
ED+G Y+C N + G +
Sbjct: 64 FEDEGTYECEAENIKGRDTYQGRI 87
Score = 42.5 bits (99), Expect = 3e-06
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
G+ L C A N + RK+ + L I+ ED G Y C N
Sbjct: 20 GQMVTLECFAFGNPVPQI---KWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAEN 76
Query: 90 SVGGESVETVLTVTA 104
G ++ + + + A
Sbjct: 77 IKGRDTYQGRIIIHA 91
Score = 35.6 bits (81), Expect = 9e-04
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 221 PPVIKESF-SDETLNPGPNYYFKCIASGNPTPEISWY 256
P IK F +D G +C A GNP P+I W
Sbjct: 4 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 40
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 52.2 bits (124), Expect = 1e-09
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP---------DHNEPVFRIDSVR 189
+P T+ G A+F+C +G PV T++W++ G+ + + F I SV+
Sbjct: 4 TKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQ 63
Query: 190 KEDKGMYQCVIRNEQESAQASGELK 214
D+G Y V+ N + +A L
Sbjct: 64 ASDEGNYSVVVENSEGKQEAEFTLT 88
Score = 39.5 bits (91), Expect = 3e-05
Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 30 GESFALLCEAQEN---MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86
GES C+ +G + + T I + D G Y V
Sbjct: 14 GESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVV 73
Query: 87 VNNSVGGESVETVLTV 102
V NS G + E LT+
Sbjct: 74 VENSEGKQEAEFTLTI 89
Score = 28.3 bits (62), Expect = 0.35
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 229 SDETLNPGPNYYFKCIASGNPTPEISWY 256
T+ G + F C G P P ++W
Sbjct: 7 RSMTVYEGESARFSCDTDGEPVPTVTWL 34
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 52.2 bits (124), Expect = 1e-09
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEP----------- 181
P + A T + G+ C +G P T+SW KDG+P+ + E
Sbjct: 4 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 63
Query: 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214
I +V K D+ Y C+ N+ AS LK
Sbjct: 64 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHLK 96
Score = 42.2 bits (98), Expect = 5e-06
Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 14 PTFSSVSDIIRFKKPGGESFALLCEAQ-----ENMWFKFIEGSSRKVAVPLNDRVKQVSG 68
PT + I+ G+S L+C+A W K E + S
Sbjct: 4 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 63
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTA 104
L I+ D +Y+C+ N G + L V A
Sbjct: 64 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 99
Score = 37.9 bits (87), Expect = 1e-04
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 221 PPVI--KESFSDETLNPGPNYYFKCIASGNPTPEISWYLDG 259
PP + ++S + T N G + C A G P P +SW DG
Sbjct: 3 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDG 43
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 52.3 bits (124), Expect = 1e-09
Identities = 24/104 (23%), Positives = 33/104 (31%), Gaps = 23/104 (22%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP---------------- 176
P L AG+ P + G +F CK + I W+K +
Sbjct: 5 PILQAGL-PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKA 63
Query: 177 ------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214
D V I +V ED G Y C+ N + S L
Sbjct: 64 AGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLT 107
Score = 38.0 bits (87), Expect = 1e-04
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 16/89 (17%)
Query: 30 GESFALLCEAQ-----ENMWFKFIEGSSRKVAVPLNDRVKQVS-----------GTLIIK 73
G +C+ W K +E + K +K + L I+
Sbjct: 20 GGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIR 79
Query: 74 EAKVEDSGKYLCVVNNSVGGESVETVLTV 102
ED+G+Y C+ NS+G LTV
Sbjct: 80 NVTFEDAGEYTCLAGNSIGISFHSAWLTV 108
Score = 37.3 bits (85), Expect = 3e-04
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 221 PPVIKESF-SDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262
P+++ ++ + G + F C + P I W +K
Sbjct: 4 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN 46
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 51.8 bits (123), Expect = 1e-09
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVF-----RIDSVRKEDKG 194
T D G +++C G P + W++DG+P+ N R + ED G
Sbjct: 7 VITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSG 66
Query: 195 MYQCVIRNEQESAQASGELK 214
MYQCV N+ + AS EL
Sbjct: 67 MYQCVAENKHGTVYASAELT 86
Score = 37.9 bits (87), Expect = 1e-04
Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
G C A + + +R++ G L + +EDSG Y CV N
Sbjct: 16 GSDLRWSCVASGKPRPA-VRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAEN 74
Query: 90 SVGGESVETVLTVTA 104
G LTV A
Sbjct: 75 KHGTVYASAELTVQA 89
Score = 34.1 bits (77), Expect = 0.003
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 222 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
P + +D + G + + C+ASG P P + W
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWL 36
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 49.5 bits (117), Expect = 1e-08
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG---------KPVPDHNEPVFRIDSVR 189
V+P + G+ A F C+ + ++W KD + N+ I+ V+
Sbjct: 6 VKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVK 65
Query: 190 KEDKGMYQCVIRNEQESAQASGELKLGGRFDP 221
+DKG Y +N + + L + +P
Sbjct: 66 GDDKGEYTVRAKNSYGTKEEIVFLNVTRHSEP 97
Score = 38.0 bits (87), Expect = 1e-04
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Query: 30 GESFALLCEAQEN---MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86
G+S C + + + K +V R L I K +D G+Y
Sbjct: 16 GQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVR 75
Query: 87 VNNSVGGESVETVLTVT 103
NS G + L VT
Sbjct: 76 AKNSYGTKEEIVFLNVT 92
Score = 31.4 bits (70), Expect = 0.029
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 222 PVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
P + G + F C + P ++W+
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWH 36
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 48.5 bits (114), Expect = 2e-08
Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKED 192
P L P T C+ GNP+ + +KD P+ +V ++
Sbjct: 3 PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKD----GTFPLPIGESVTVTRDL 58
Query: 193 KGMYQCVIRNEQESAQASGELK 214
+G Y C R+ Q +
Sbjct: 59 EGTYLCRARSTQGEVTREVTVN 80
Score = 32.3 bits (72), Expect = 0.012
Identities = 14/98 (14%), Positives = 23/98 (23%), Gaps = 20/98 (20%)
Query: 13 APTFSSVSDIIRFKKPGGESFALLCEAQEN-----MWFKFIEGSSRKVAVPLNDRVKQVS 67
P + P +C+A N K
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT---------------FPL 46
Query: 68 GTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAP 105
+ G YLC ++ G + E + V +P
Sbjct: 47 PIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 84
Score = 30.7 bits (68), Expect = 0.034
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 221 PPVIKESF--SDETLNPGPNYYFKCIASGNPTPEISWY 256
P + E + T C A GNP PE+
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 39
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 48.7 bits (115), Expect = 2e-08
Identities = 15/89 (16%), Positives = 24/89 (26%), Gaps = 10/89 (11%)
Query: 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRID----------SVR 189
QT+ G A F + G P W K+G + + + V
Sbjct: 10 RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVT 69
Query: 190 KEDKGMYQCVIRNEQESAQASGELKLGGR 218
ED N + L + +
Sbjct: 70 GEDSASIMVKAINIAGETSSHAFLLVQAK 98
Score = 37.2 bits (85), Expect = 2e-04
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAER 267
P I E +T+ G + +F+ G P PE WY +G K+ ++R
Sbjct: 4 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDR 50
Score = 33.7 bits (76), Expect = 0.004
Identities = 14/97 (14%), Positives = 23/97 (23%), Gaps = 6/97 (6%)
Query: 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQEN----MWFKFIEGSSRKVAVPLNDRVKQVS 67
+AP + G + + +
Sbjct: 3 EAPKIFERIQSQTVGQ--GSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV 60
Query: 68 GTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTA 104
L+I++ EDS + N G S L V A
Sbjct: 61 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 97
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 48.4 bits (114), Expect = 3e-08
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEP-----------VFRIDSVR 189
P T+ G+P + C EG I W+KDG V + ++ + SV
Sbjct: 3 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 62
Query: 190 KEDKGMYQCVIRNEQESAQAS 210
+ D G Y C + + E+ +
Sbjct: 63 RSDAGRYWCQVEDGGETEISQ 83
Score = 39.9 bits (92), Expect = 3e-05
Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 6/80 (7%)
Query: 30 GESFALLCEAQEN-----MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84
G+ L C + W K + + + G L +K + D+G+Y
Sbjct: 11 GQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYW 70
Query: 85 CVVNNSVG-GESVETVLTVT 103
C V + S LTV
Sbjct: 71 CQVEDGGETEISQPVWLTVE 90
Score = 27.6 bits (60), Expect = 0.47
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 229 SDETLNPGPNYYFKCIASGNPTPEISWY 256
T++ G C G P+I W
Sbjct: 4 VKLTVSQGQPVKLNCSVEGMEEPDIQWV 31
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 48.1 bits (113), Expect = 5e-08
Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 24/101 (23%)
Query: 139 VEPTVQTIDF------GRPAQFTCK-YEGNPVKTISWMKDGKPVPDHNEPVFR------- 184
V P+ TI G A TC ++G+P SW KDG + + R
Sbjct: 1 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSF 60
Query: 185 ----------IDSVRKEDKGMYQCVIRNEQESAQASGELKL 215
D V D G Y C +N +A S +
Sbjct: 61 TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHM 101
Score = 33.4 bits (75), Expect = 0.007
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVNAE 266
PP ++ G C G+P E SW+ DG ++ A+
Sbjct: 2 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTAD 48
Score = 32.7 bits (73), Expect = 0.014
Identities = 16/87 (18%), Positives = 23/87 (26%), Gaps = 12/87 (13%)
Query: 30 GESFALLCEAQE---------NMWFKFIEGSSRKVAVPLND---RVKQVSGTLIIKEAKV 77
G L C + + + K + + SG LI
Sbjct: 17 GNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTA 76
Query: 78 EDSGKYLCVVNNSVGGESVETVLTVTA 104
DSG+Y C N G + A
Sbjct: 77 FDSGEYYCQAQNGYGTAMRSEAAHMDA 103
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 47.5 bits (112), Expect = 7e-08
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 12/79 (15%)
Query: 144 QTIDFGRPAQFTC------KYEGNPVKTISWMKDGKPVPDHNEPVF------RIDSVRKE 191
Q + C K E N + + W KD KP+ N + +V ++
Sbjct: 9 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEK 68
Query: 192 DKGMYQCVIRNEQESAQAS 210
+G Y C Q
Sbjct: 69 HRGNYTCHASYTYLGKQYP 87
Score = 36.7 bits (84), Expect = 4e-04
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 60 NDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEPT 113
N V LI+ + G Y C + + G+ + +PT
Sbjct: 50 NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 103
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 46.5 bits (109), Expect = 1e-07
Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCK-YEGNPVKTISWMKDGKPVPDHNEP----VFRIDS 187
P + E Q++ G F C +P T+ W + + I +
Sbjct: 1 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRN 60
Query: 188 VRKEDKGMYQCVIRNEQESAQASGELK 214
V+ D G Y C N Q + L
Sbjct: 61 VQPSDAGTYVCTGSNMFAMDQGTATLH 87
Score = 35.0 bits (79), Expect = 0.002
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
G +C A+ + +R L R +G L I+ + D+G Y+C +N
Sbjct: 17 GADVTFICTAKSKSPAYTLV-WTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSN 75
Query: 90 SVGGESVETVLTV 102
+ L V
Sbjct: 76 MFAMDQGTATLHV 88
Score = 27.6 bits (60), Expect = 0.51
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVN 264
V E +++ PG + F C A +P + W +
Sbjct: 2 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP 46
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 46.4 bits (109), Expect = 2e-07
Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 10/86 (11%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRID----------SV 188
+ G A+F CK EG P + W KD PV + D V
Sbjct: 13 KTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEV 72
Query: 189 RKEDKGMYQCVIRNEQESAQASGELK 214
+D Y C N A + EL
Sbjct: 73 CGDDDAKYTCKAVNSLGEATCTAELL 98
Score = 36.8 bits (84), Expect = 3e-04
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 13 APTFSSVSDIIRFKKPGGESFALLCEAQENM----WFKFIEGSSRKVAVPLNDRVKQVSG 68
P F+ + + G + C+ + + + ++ D ++ +
Sbjct: 8 KPYFTKTILDMEVVE--GSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNC 65
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
+L I E +D KY C NS+G + L V
Sbjct: 66 SLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 99
Score = 30.6 bits (68), Expect = 0.059
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
P ++ D + G F C G P PE+ W+
Sbjct: 8 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWF 43
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 46.5 bits (109), Expect = 2e-07
Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 20/101 (19%)
Query: 141 PTVQTIDFGRPAQFTC---KYEGNPVKTISWMKDGKPVPDHNEP--------------VF 183
PT+ ++ C +GNP + W +G + +
Sbjct: 5 PTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCL 64
Query: 184 RIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVI 224
++D+ + G Y + +NE + P I
Sbjct: 65 QLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF---MGWPGI 102
Score = 32.6 bits (73), Expect = 0.013
Identities = 7/63 (11%), Positives = 15/63 (23%)
Query: 43 MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
+ S + G L + ++G Y + N G + +
Sbjct: 37 YNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF 96
Query: 103 TAP 105
Sbjct: 97 MGW 99
Score = 30.7 bits (68), Expect = 0.053
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAER 267
P I E+ ++ GNP P + W+ +G L ++
Sbjct: 4 APTITFL---ESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKY 47
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 45.2 bits (106), Expect = 3e-07
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 140 EPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKP-----------VPDHNEPVFRIDSV 188
+ T G + C+ + W K+G+ + + + I+
Sbjct: 6 QLEDTTAYCGERVELECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGA 64
Query: 189 RKEDKGMYQCVIRNEQESAQASGELK 214
K D Y + Q SA+ S +LK
Sbjct: 65 TKADAAEYSVMTTGGQSSAKLSVDLK 90
Score = 33.6 bits (76), Expect = 0.004
Identities = 19/77 (24%), Positives = 25/77 (32%), Gaps = 8/77 (10%)
Query: 30 GESFALLCEAQ----ENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLC 85
GE L CE WFK E RV+ LII+ A D+ +Y
Sbjct: 15 GERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSV 74
Query: 86 VVNNSVGGESVETVLTV 102
+ L+V
Sbjct: 75 MTTGGQS----SAKLSV 87
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 45.4 bits (106), Expect = 3e-07
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 17/94 (18%)
Query: 139 VEPTVQTIDFGRPAQFTCK-YEGNPVKTISWMKDGKPVP----------------DHNEP 181
+ G A TC +G+P +W KDG +P +
Sbjct: 7 TVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTG 66
Query: 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215
D + D G Y C RN + S +++
Sbjct: 67 ELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRM 100
Score = 34.2 bits (77), Expect = 0.003
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 11/86 (12%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQV-----------SGTLIIKEAKVE 78
G L C Q+ + +P N + + +G L+
Sbjct: 17 GNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSAS 76
Query: 79 DSGKYLCVVNNSVGGESVETVLTVTA 104
D+G+Y C N G + + A
Sbjct: 77 DTGEYSCEARNGYGTPMTSNAVRMEA 102
Score = 31.1 bits (69), Expect = 0.035
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIAS-GNPTPEISWYLDGKKLVNAER 267
PP + G C G+P E +W+ DG + +
Sbjct: 2 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPK 49
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3,
second domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 45.0 bits (105), Expect = 4e-07
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 139 VEPTVQTIDFGRPAQFTCKYE-GNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQ 197
VEP + P Q +C+ TI W + + ++ M+
Sbjct: 6 VEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFS 65
Query: 198 CVIRNE 203
C N
Sbjct: 66 CEAHNL 71
Score = 24.2 bits (51), Expect = 7.8
Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 6/74 (8%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
F L CEA I + + ++ V S + C +N
Sbjct: 16 NAPFQLSCEAVGPPEPVTIV--WWRGTTKIGGPAPS---PSVLNVTGVTQSTMFSCEAHN 70
Query: 90 SVG-GESVETVLTV 102
G S + +
Sbjct: 71 LKGLASSRTATVHL 84
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 45.4 bits (106), Expect = 6e-07
Identities = 13/112 (11%), Positives = 28/112 (25%), Gaps = 9/112 (8%)
Query: 112 PTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKD 171
P + G + P + + + E
Sbjct: 16 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDK 75
Query: 172 GKPVP---------DHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214
+ +F ++ KED+G+Y ++N Q + +K
Sbjct: 76 KLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVK 127
Score = 38.1 bits (87), Expect = 2e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
++ A+ ED G Y V N VG + V + V
Sbjct: 95 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 128
Score = 34.3 bits (77), Expect = 0.005
Identities = 11/55 (20%), Positives = 16/55 (29%), Gaps = 5/55 (9%)
Query: 218 RFDPPVIKESFSDE-----TLNPGPNYYFKCIASGNPTPEISWYLDGKKLVNAER 267
R +PP I + G SG+P P + W + A
Sbjct: 1 RQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPA 55
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 43.9 bits (102), Expect = 1e-06
Identities = 9/104 (8%), Positives = 26/104 (25%), Gaps = 8/104 (7%)
Query: 111 EPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMK 170
P + G F+ + + L + + + + + +
Sbjct: 10 RPQDGEVTVGGSITFSARVAGASLLKP------PVVKWFKGKWVDLSSKVG--QHLQLHD 61
Query: 171 DGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214
I + G Y+C + + + ++ L
Sbjct: 62 SYDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLT 105
Score = 40.0 bits (92), Expect = 3e-05
Identities = 12/80 (15%), Positives = 25/80 (31%)
Query: 27 KPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86
+ + + + G ++ + K L I +A+ +G Y C
Sbjct: 31 ASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGGYRCE 90
Query: 87 VNNSVGGESVETVLTVTAPL 106
V+ + LTV +
Sbjct: 91 VSTKDKFDCSNFNLTVHEAM 110
Score = 25.8 bits (55), Expect = 3.1
Identities = 6/41 (14%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNP---TPEISWYLD 258
+ D + G + F +G P + W+
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKG 44
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 43.8 bits (102), Expect = 2e-06
Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 22/105 (20%)
Query: 141 PTVQTIDFGRPAQFTC---KYEGNPVKTISWMKDGKPVPDHN----------------EP 181
P + C +G P ++ W+ +G + + +
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPPVIKE 226
R++ + G Y + N A AS D P
Sbjct: 64 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF---MDNPFEFN 105
Score = 35.3 bits (80), Expect = 0.002
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAP 105
G L + + ++G Y + N G S +
Sbjct: 62 HGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 100
Score = 24.1 bits (51), Expect = 9.9
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 241 FKCIASGNPTPEISWYLDGKKLVN 264
G P P + W +G L
Sbjct: 20 IPFSVDGQPAPSLRWLFNGSVLNE 43
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 43.4 bits (101), Expect = 2e-06
Identities = 15/72 (20%), Positives = 19/72 (26%), Gaps = 7/72 (9%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNP-VKTISWMKDGKPVPDHNEPV------FRIDSVRKE 191
V V T G TC T+ W+ H + SV+
Sbjct: 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLH 70
Query: 192 DKGMYQCVIRNE 203
D G Y C
Sbjct: 71 DSGNYSCYRAGR 82
Score = 38.0 bits (87), Expect = 1e-04
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 6/98 (6%)
Query: 6 LKPVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQ 65
L P P ++ G+S L C E + RK A +
Sbjct: 1 LAPRR--CPAQEVARGVLTSLP--GDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWA 56
Query: 66 VSGT-LIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
G L+++ ++ DSG Y C G +V ++ V
Sbjct: 57 GMGRRLLLRSVQLHDSGNYSCYRAGRPAG-TVHLLVDV 93
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 43.9 bits (102), Expect = 2e-06
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 3/106 (2%)
Query: 1 MVGSDLK-PVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPL 59
+VG + + P ++ ++ ++ P L ++ + E R L
Sbjct: 15 LVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGR--TELL 72
Query: 60 NDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAP 105
+ + + L I+ + D G Y C + E L V P
Sbjct: 73 KESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 118
Score = 38.5 bits (88), Expect = 2e-04
Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 12/128 (9%)
Query: 100 LTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYE 159
V P P + G A+ C+ ++ + +
Sbjct: 3 FRVIGP----GHPIRALV--GDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKD 56
Query: 160 GNPVKTISWMKDGKPV---PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKLG 216
+ + + + + + RI +VR D+G Y C R+ +A+ ELK+
Sbjct: 57 QDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKV- 115
Query: 217 GRFDPPVI 224
DP
Sbjct: 116 --EDPFYW 121
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 42.7 bits (99), Expect = 3e-06
Identities = 14/81 (17%), Positives = 19/81 (23%), Gaps = 9/81 (11%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDG---------KPVPDHNEPVFRIDSVR 189
+P P C EGN K +E +
Sbjct: 7 DQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQ 66
Query: 190 KEDKGMYQCVIRNEQESAQAS 210
D+G YQC A +
Sbjct: 67 ASDEGHYQCFAETPAGVASSR 87
Score = 38.1 bits (87), Expect = 1e-04
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 6/96 (6%)
Query: 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPL---NDRVKQVSG 68
K P + F++ L C + N + N +++ G
Sbjct: 1 KYPVLKDQPAEVLFRE--NNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG 58
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVETV-LTVT 103
+L+ + D G Y C G S + T
Sbjct: 59 SLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKT 94
Score = 28.9 bits (63), Expect = 0.23
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
PV+K+ ++ +CI GN +
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSW 37
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 42.7 bits (99), Expect = 3e-06
Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 15/86 (17%)
Query: 140 EPTVQTIDFGRPAQFTCKYEGNPVK-TISWMKDGKPVP--------------DHNEPVFR 184
+ +I G P + C + + ++W K + + +
Sbjct: 9 RQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILH 68
Query: 185 IDSVRKEDKGMYQCVIRNEQESAQAS 210
+ V D G Y+C + ++
Sbjct: 69 FEPVLPNDNGSYRCSANFQSNLIESH 94
Score = 29.6 bits (65), Expect = 0.13
Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 220 DPPVIKESFSDETLNPGPNYYFKCIASGNP-TPEISWYLDGKKLVN 264
D + + S+ ++ G + +C P ++W
Sbjct: 2 DVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCV 47
Score = 28.8 bits (63), Expect = 0.26
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 10/84 (11%)
Query: 30 GESFALLCEAQ------ENMWFKFIEGSSRKVAVPLNDRVKQVSGTLI---IKEAKVEDS 80
G+ F L C + W K + K+ ++ + + + D+
Sbjct: 18 GDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDN 77
Query: 81 GKYLCVVNNSVG-GESVETVLTVT 103
G Y C N ES T L VT
Sbjct: 78 GSYRCSANFQSNLIESHSTTLYVT 101
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 42.3 bits (98), Expect = 5e-06
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 111 EPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMK 170
+P T+ G F K + L PT++ K + +
Sbjct: 6 KPQGGTVKVGEDITFIAKVKAEDLLRK---PTIKWFKG-----KWMDLASKAGKHLQLKE 57
Query: 171 DGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELK 214
+ +I + G Y+C + + + S +L+
Sbjct: 58 TFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLE 101
Score = 37.7 bits (86), Expect = 2e-04
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 62 RVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAP 105
+ + + I +AK +G Y C V +S L V
Sbjct: 62 HSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHES 105
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 41.6 bits (96), Expect = 8e-06
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 12/84 (14%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP------------DHNEPVFRID 186
+ ++ G+ A F C G V G V F +
Sbjct: 6 LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVV 65
Query: 187 SVRKEDKGMYQCVIRNEQESAQAS 210
+ K D G Y+C+IR E ++
Sbjct: 66 NTTKRDAGKYRCMIRTEGGVGISN 89
Score = 37.3 bits (85), Expect = 2e-04
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 10/98 (10%)
Query: 12 KAPTFSSVSDIIRFKKPGGESFALLCEAQEN------MWFKFIEGSSRKVAVPLNDRVKQ 65
+ P F + ++ G+ C A +W + I+ + ++
Sbjct: 1 RTPHFLRIQNVEVNA---GQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR 57
Query: 66 VSGTLIIKEAKVEDSGKYLCVVNNSVG-GESVETVLTV 102
+ + D+GKY C++ G G S L V
Sbjct: 58 FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 40.7 bits (94), Expect = 2e-05
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 139 VEPTVQTIDFG---RPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFR--------IDS 187
+P G TC+ NP T W +G + + +R +
Sbjct: 9 EQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNP 68
Query: 188 VRKEDKGMYQCVIRNEQESA 207
V+ +D G YQCV N + +
Sbjct: 69 VKAKDAGSYQCVATNARGTV 88
Score = 33.7 bits (76), Expect = 0.005
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 13 APTFSSV-SDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVS--GT 69
P F + + + E L C A+ N + + D ++
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 70 LIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPL 106
+I K +D+G Y CV N+ G TV++ A L
Sbjct: 64 VISNPVKAKDAGSYQCVATNARG-----TVVSREASL 95
Score = 31.0 bits (69), Expect = 0.037
Identities = 9/39 (23%), Positives = 11/39 (28%), Gaps = 3/39 (7%)
Query: 221 PPVIKESFSDETLNPGP---NYYFKCIASGNPTPEISWY 256
PV +E + G C A NP W
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWK 42
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 39.9 bits (92), Expect = 2e-05
Identities = 11/68 (16%), Positives = 22/68 (32%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 198
+EP ++ C+ +P + + + + ID+ D G Y+C
Sbjct: 10 LEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRC 69
Query: 199 VIRNEQES 206
S
Sbjct: 70 QTNLSTLS 77
Score = 29.1 bits (64), Expect = 0.15
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 72 IKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
I A V DSG+Y C N S + V+ L V
Sbjct: 56 IDAATVNDSGEYRCQTNLSTLSDPVQ--LEV 84
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 39.5 bits (91), Expect = 4e-05
Identities = 20/85 (23%), Positives = 25/85 (29%), Gaps = 10/85 (11%)
Query: 140 EPTVQTIDFGRPAQFTCKY-EGNPVKTISWMKDGKPVPDHNEPVFRID---------SVR 189
E + C TI+W KD P E RI +
Sbjct: 8 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAK 67
Query: 190 KEDKGMYQCVIRNEQESAQASGELK 214
ED G Y CV+RN + K
Sbjct: 68 VEDSGHYYCVVRNSSYCLRIKISAK 92
Score = 33.7 bits (76), Expect = 0.004
Identities = 21/81 (25%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Query: 28 PGGESFALLCEAQEN------MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSG 81
E C N W+K + R+ Q L AKVEDSG
Sbjct: 15 SANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQ--ASRIHQHKEKLWFVPAKVEDSG 72
Query: 82 KYLCVVNNSVGGESVETVLTV 102
Y CVV NS ++
Sbjct: 73 HYYCVVRNSSYCLRIKISAKF 93
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.1 bits (90), Expect = 5e-05
Identities = 20/94 (21%), Positives = 29/94 (30%), Gaps = 15/94 (15%)
Query: 128 KYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEP------ 181
K E P G C Y NP+ ++ K+GK V + E
Sbjct: 1 KGEPVPQYV----SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHN 56
Query: 182 -----VFRIDSVRKEDKGMYQCVIRNEQESAQAS 210
+ ED+G+Y C + N Q
Sbjct: 57 RTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH 90
Score = 31.8 bits (71), Expect = 0.020
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 30 GESFALLCEAQEN-----MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYL 84
G+ + C N +FK + + + + L+ K ED G Y
Sbjct: 18 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYT 77
Query: 85 CVVNNSVG-GESVETVLTV 102
C V+N VG + LTV
Sbjct: 78 CEVDNGVGKPQKHSLKLTV 96
Score = 30.3 bits (67), Expect = 0.071
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 220 DPPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
PV + D G C+ NP +++
Sbjct: 2 GEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYF 38
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 38.1 bits (87), Expect = 8e-05
Identities = 13/71 (18%), Positives = 22/71 (30%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 198
+ P I G TC + + + + I + + ED G Y+C
Sbjct: 6 LNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKC 65
Query: 199 VIRNEQESAQA 209
+ ES
Sbjct: 66 QHQQVNESEPV 76
Score = 32.7 bits (73), Expect = 0.007
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 70 LIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
L I AK EDSG+Y C E V L V
Sbjct: 50 LNIVNAKFEDSGEYKCQHQQVNESEPVY--LEVF 81
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 38.7 bits (89), Expect = 8e-05
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 11/78 (14%)
Query: 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRK 190
+ G + T + + + W+K+G+ + + I
Sbjct: 13 EPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSL 71
Query: 191 EDKGMYQCVIRNEQESAQ 208
D YQCV+ E+ S +
Sbjct: 72 ADDAAYQCVVGGEKCSTE 89
Score = 27.9 bits (61), Expect = 0.42
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 6/85 (7%)
Query: 12 KAPTFSS-VSDIIRFKKPGGESFALLCEAQE---NMWFKFIEGSSRKVAVPLNDRVKQVS 67
K+ F + + K G L E + + + +
Sbjct: 4 KSTAFQKKLEPAYQVSK--GHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAK 61
Query: 68 GTLIIKEAKVEDSGKYLCVVNNSVG 92
TL I + + D Y CVV
Sbjct: 62 RTLTISQCSLADDAAYQCVVGGEKC 86
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 38.5 bits (89), Expect = 9e-05
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
+G L IK +DSG Y V ++ G + L +
Sbjct: 59 NGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLR 95
Score = 28.1 bits (62), Expect = 0.35
Identities = 10/85 (11%), Positives = 25/85 (29%), Gaps = 18/85 (21%)
Query: 149 GRPAQFTCKY--EGNPVKTISWMKDGKPVPDHN---EPVFR-------------IDSVRK 190
G + + + W + V + +P + I ++ +
Sbjct: 10 GHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTR 69
Query: 191 EDKGMYQCVIRNEQESAQASGELKL 215
+D G Y + + + + L L
Sbjct: 70 DDSGTYNVTVYSTNGTRILNKALDL 94
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 38.6 bits (88), Expect = 1e-04
Identities = 15/105 (14%), Positives = 23/105 (21%), Gaps = 28/105 (26%)
Query: 141 PTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPD---------------------HN 179
+D G Q C G W +G + +
Sbjct: 9 NETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTL 68
Query: 180 EPVFRIDSVRKEDKG-MYQCVIRNEQESAQASGELKLGGRFDPPV 223
V I + + C +N A +L PV
Sbjct: 69 ITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI------YPV 107
Score = 30.5 bits (67), Expect = 0.061
Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 10/97 (10%)
Query: 7 KPVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQV 66
+ +SDI +K G E+ + P N R +
Sbjct: 18 SQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVEN---------PANKRRSTL 68
Query: 67 SGTLIIKEAKVEDSG-KYLCVVNNSVGGESVETVLTV 102
L I E + + C N+ G ++ L
Sbjct: 69 ITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
Score = 29.0 bits (63), Expect = 0.24
Identities = 6/40 (15%), Positives = 14/40 (35%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGK 260
P ++ + ++ G C +G + W +G
Sbjct: 2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGS 41
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 38.3 bits (88), Expect = 1e-04
Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 1 MVGSDLK-PVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSR-KVAVP 58
VGS + F + + S ++ + +I+ K +
Sbjct: 12 AVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQ 71
Query: 59 LNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNS--VGGESVETVLTVT 103
G+++I D+G + C V N + G++ + L V
Sbjct: 72 WVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF 118
Score = 33.0 bits (74), Expect = 0.010
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 6/102 (5%)
Query: 120 GRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPV---- 175
G C + S ++ + T + G + + I + K
Sbjct: 14 GSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWV 73
Query: 176 --PDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215
P + I ++ D G + C ++N + + ++ L
Sbjct: 74 GDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTL 115
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 37.8 bits (86), Expect = 2e-04
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 60 NDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
DRV S + +D+G+Y C+V+ G E + +T
Sbjct: 57 ADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLT 100
Score = 33.1 bits (74), Expect = 0.008
Identities = 13/94 (13%), Positives = 22/94 (23%), Gaps = 17/94 (18%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEP----------------- 181
+ + + TC Y G + W
Sbjct: 6 TAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSS 65
Query: 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215
SV ++D G Y C++ E + L
Sbjct: 66 GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL 99
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 37.7 bits (86), Expect = 2e-04
Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 17/93 (18%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKP----------------VPDHNEPV 182
+ + I+ G A CK E P T
Sbjct: 7 AVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSE 66
Query: 183 FRIDSVRKEDK-GMYQCVIRNEQESAQASGELK 214
I+++ E G Y+C + + S QA L+
Sbjct: 67 LHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 99
Score = 32.7 bits (73), Expect = 0.011
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 17/87 (19%)
Query: 30 GESFALLCEAQEN--------------MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEA 75
GE+ L+C+++ + GS + V + S I
Sbjct: 17 GETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGR---SELHIENLN 73
Query: 76 KVEDSGKYLCVVNNSVGGESVETVLTV 102
D G+Y C +S G + L V
Sbjct: 74 MEADPGQYRCNGTSSKGSDQAIITLRV 100
Score = 32.0 bits (71), Expect = 0.019
Identities = 9/36 (25%), Positives = 13/36 (36%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
PP +K S E +N G C + P +
Sbjct: 2 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAW 37
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 37.3 bits (85), Expect = 2e-04
Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 9/85 (10%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISW---------MKDGKPVPDHNEPVFRIDSVR 189
I G + G P T +W + + S +
Sbjct: 7 TASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAK 66
Query: 190 KEDKGMYQCVIRNEQESAQASGELK 214
+ D G Y+ ++NE +A E+
Sbjct: 67 RADSGNYKLKVKNELGEDEAIFEVI 91
Score = 32.6 bits (73), Expect = 0.010
Identities = 7/36 (19%), Positives = 12/36 (33%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWY 256
P I + + G + + G P P +W
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWT 37
Score = 24.9 bits (53), Expect = 4.9
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 30 GESFALLCEAQEN---MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCV 86
G + L + + S +A L K + ++ AK DSG Y
Sbjct: 17 GFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLK 76
Query: 87 VNNSVGGESVETVLTV 102
V N +G + + V
Sbjct: 77 VKNELGEDEAIFEVIV 92
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 37.3 bits (85), Expect = 3e-04
Identities = 9/92 (9%), Positives = 24/92 (26%), Gaps = 14/92 (15%)
Query: 133 PPLAAGVEPTVQTIDFGRPAQFTCKYEG---NPVKTISWMKDGKPVPDHNE--------- 180
PP + + G+ C+ T+ + + +
Sbjct: 1 PPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQE 60
Query: 181 --PVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210
F + R++ + C+ + S +
Sbjct: 61 ATATFNSTADREDGHRNFSCLAVLDLMSRGGN 92
Score = 31.9 bits (71), Expect = 0.020
Identities = 4/50 (8%), Positives = 14/50 (28%), Gaps = 3/50 (6%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASG---NPTPEISWYLDGKKLVNAER 267
P + + + G ++ +C + + + + L
Sbjct: 2 PRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETF 51
Score = 30.3 bits (67), Expect = 0.082
Identities = 6/63 (9%), Positives = 17/63 (26%)
Query: 43 MWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
F+ E + ++ + T + + + C+ +
Sbjct: 38 FLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKH 97
Query: 103 TAP 105
+AP
Sbjct: 98 SAP 100
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 37.2 bits (85), Expect = 3e-04
Identities = 11/88 (12%), Positives = 21/88 (23%), Gaps = 9/88 (10%)
Query: 132 SPPLAAGVEPTVQTIDFGRPAQFTCKYEG---NPVKTISWMKDGKPVPDHN------EPV 182
P + P G+ C+ EG T+ ++ K + E
Sbjct: 2 WTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVT 61
Query: 183 FRIDSVRKEDKGMYQCVIRNEQESAQAS 210
+ R + C +
Sbjct: 62 TTVLVRRDHHGAQFSCRTELDLRPQGLE 89
Score = 36.0 bits (82), Expect = 8e-04
Identities = 5/42 (11%), Positives = 13/42 (30%)
Query: 65 QVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPL 106
T + + ++ C + + +E +AP
Sbjct: 57 PAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPY 98
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 36.3 bits (83), Expect = 5e-04
Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Query: 120 GRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN 179
G + TC + + + Q G F K + D
Sbjct: 9 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLW---DQG 65
Query: 180 EPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208
I +++ ED Y C + +++E Q
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVEDQKEEVQ 94
Score = 33.2 bits (75), Expect = 0.007
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 61 DRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
Q + LIIK K+EDS Y+C V + E L V
Sbjct: 60 SLWDQGNFPLIIKNLKIEDSDTYICEVEDQ----KEEVQLLV 97
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 36.5 bits (83), Expect = 6e-04
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 16/98 (16%)
Query: 141 PTVQTIDFGRPAQFTC---KYEGNPVKTISWMKDGKPVP-------------DHNEPVFR 184
P V +++ C GNP T+ W+ +G+P+ + +E
Sbjct: 6 PRVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLL 65
Query: 185 IDSVRKEDKGMYQCVIRNEQESAQASGELKLGGRFDPP 222
+ + G Y + +N +A + P
Sbjct: 66 FNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPV 103
Score = 30.7 bits (68), Expect = 0.051
Identities = 6/39 (15%), Positives = 13/39 (33%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAP 105
G L+ + ++G Y + N +G +
Sbjct: 61 EGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKE 99
Score = 24.9 bits (53), Expect = 5.1
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLD 258
PP + E + + + GNP P + W +
Sbjct: 5 PPRVVSLEEPELRL---EHCIEFVVRGNPPPTLHWLHN 39
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 35.8 bits (81), Expect = 6e-04
Identities = 15/73 (20%), Positives = 26/73 (35%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
G + L C + N+ F + + + L+I DSG Y C+
Sbjct: 12 GGTAELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEE 71
Query: 90 SVGGESVETVLTV 102
V ++V V+
Sbjct: 72 RVKNKTVFQVVAK 84
Score = 33.5 bits (75), Expect = 0.005
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVF------RIDSVRKEDKGMYQ 197
G A+ C + N + ++G + + I ++ + D G+YQ
Sbjct: 7 HFFKHGGTAELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQ 66
Query: 198 CVIRNEQESAQAS 210
C+ ++
Sbjct: 67 CLSEERVKNKTVF 79
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 35.7 bits (81), Expect = 7e-04
Identities = 10/68 (14%), Positives = 16/68 (23%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 198
+EP + TC+ +P + + D G Y C
Sbjct: 9 LEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTC 68
Query: 199 VIRNEQES 206
S
Sbjct: 69 QTGQTSLS 76
Score = 27.3 bits (59), Expect = 0.62
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 16/97 (16%)
Query: 7 KPVGFKAPTFSSVSDIIRFKKPGGESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQV 66
K V P + +V +S L C + I+ + +
Sbjct: 4 KAVLKLEPQWINVLQ--------EDSVTLTCRGTHSPESDSIQWFHN------GNLIPTH 49
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
+ +A DSG+Y C + + V LTV
Sbjct: 50 TQPSYRFKANNNDSGEYTCQTGQTSLSDPVH--LTVL 84
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 36.5 bits (83), Expect = 8e-04
Identities = 9/61 (14%), Positives = 23/61 (37%)
Query: 42 NMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLT 101
+ + + ++ +K ++ + ++ D G Y C V + G + + L
Sbjct: 62 DKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLV 121
Query: 102 V 102
V
Sbjct: 122 V 122
Score = 34.2 bits (77), Expect = 0.005
Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 14/123 (11%)
Query: 100 LTVTAPLAAGVEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTC--- 156
L++T P E ++ G A CK+ +SP ++
Sbjct: 5 LSITTP-----EEMIEKAK-GETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIIL 58
Query: 157 -----KYEGNPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQASG 211
Y+ + + + +++ D G YQC ++ A
Sbjct: 59 YSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKI 118
Query: 212 ELK 214
L
Sbjct: 119 HLV 121
>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 34.5 bits (79), Expect = 0.002
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVPDHNEPVFRI-DSVRKEDKGMYQCVIRNEQESA 207
G + TC + + + + W K+G+ +P ++ + D ED G Y C ++
Sbjct: 14 GTSVELTCPLDSD--ENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNT 71
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 34.1 bits (77), Expect = 0.003
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 60 NDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
+ VSG+L I D +Y N +++ L V
Sbjct: 52 RVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD--TMKFFLYV 92
Score = 31.0 bits (69), Expect = 0.035
Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 20/81 (24%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVP-------------------DHNEPVFRIDSVR 189
F P+K + W K V D I ++
Sbjct: 10 YGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLT 68
Query: 190 KEDKGMYQCVIRNEQESAQAS 210
D+ Y+ N ++ +
Sbjct: 69 SSDEDEYEMESPNITDTMKFF 89
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 34.1 bits (77), Expect = 0.004
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
+ +++I + D G Y CVV L
Sbjct: 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEV 100
Score = 33.3 bits (75), Expect = 0.006
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 120 GRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDHN 179
A +C + +S E I + + + + K+ N
Sbjct: 9 KEVATLSCGHNVSVE-----ELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITN 63
Query: 180 EPVFRIDSVRKEDKGMYQCVIRNEQES 206
I ++R D+G Y+CV+ ++
Sbjct: 64 NLSIVILALRPSDEGTYECVVLKYEKD 90
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 33.6 bits (76), Expect = 0.004
Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 10/74 (13%)
Query: 144 QTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH---------NEPVFRIDSVRKEDKG 194
+ G A F + P W G+P+ + + + + + G
Sbjct: 11 VEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHNCQLGMTG 69
Query: 195 MYQCVIRNEQESAQ 208
N + +A
Sbjct: 70 EVSFQAANAKSAAN 83
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 33.2 bits (74), Expect = 0.007
Identities = 7/42 (16%), Positives = 16/42 (38%)
Query: 221 PPVIKESFSDETLNPGPNYYFKCIASGNPTPEISWYLDGKKL 262
P +K + +++ G + +C G + W L +
Sbjct: 2 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQ 43
Score = 26.6 bits (57), Expect = 1.3
Identities = 6/34 (17%), Positives = 10/34 (29%)
Query: 70 LIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
+ + C N VG V + V+
Sbjct: 59 TLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS 92
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.2 bits (74), Expect = 0.007
Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 17/94 (18%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH-----------------NEP 181
I P + +C Y G + W D
Sbjct: 9 SSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPT 68
Query: 182 VFRIDSVRKEDKGMYQCVIRNEQESAQASGELKL 215
SV +ED G Y C++ E ++ ++KL
Sbjct: 69 GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKL 102
Score = 32.0 bits (71), Expect = 0.021
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 13/102 (12%)
Query: 13 APTFSSVSDIIRFKKPGGESFALLCEAQ-----------ENMWFKFIEGSSRKVAVPLND 61
+ T S +R + L C + + + K+ D
Sbjct: 4 SVTVHSSEPEVRIPE--NNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYED 61
Query: 62 RVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
RV + + K ED+G Y C+V+ G E + +
Sbjct: 62 RVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLI 103
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 33.5 bits (75), Expect = 0.008
Identities = 13/101 (12%), Positives = 20/101 (19%), Gaps = 17/101 (16%)
Query: 139 VEPTVQTIDFGRPAQFTCKYEGNPVKTISWM-KDGKPVPDHNEPVF-------------- 183
Q G Q C P + +
Sbjct: 11 SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVIST 70
Query: 184 -RIDSVRKE-DKGMYQCVIRNEQESAQASGELKLGGRFDPP 222
I ++ + + +Y C N S LK G
Sbjct: 71 LTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSG 111
Score = 30.8 bits (68), Expect = 0.068
Identities = 10/41 (24%), Positives = 12/41 (29%), Gaps = 1/41 (2%)
Query: 66 VSGTLIIKEAKVE-DSGKYLCVVNNSVGGESVETVLTVTAP 105
V TL I Y C NS G ++ L
Sbjct: 67 VISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGS 107
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 32.9 bits (74), Expect = 0.011
Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Query: 119 FGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWMKDGKPVPDH 178
F A C++ S + + ++ G+ D
Sbjct: 8 FNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKF-DSVHSKYMGRTSFDS 66
Query: 179 NEPVFRIDSVRKEDKGMYQCVIRNEQES 206
+ R+ +++ +DKG+YQC+I +++ +
Sbjct: 67 DSWTLRLHNLQIKDKGLYQCIIHHKKPT 94
Score = 31.4 bits (70), Expect = 0.036
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 45 FKFIEGSSRKVAVP--LNDRVKQVSG--TLIIKEAKVEDSGKYLCVVNNSVGGESV---- 96
+ G + +V R S TL + +++D G Y C++++ +
Sbjct: 42 NEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQ 101
Query: 97 -ETVLTVTA 104
+ L+V A
Sbjct: 102 MNSELSVLA 110
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 32.3 bits (72), Expect = 0.015
Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 17/106 (16%)
Query: 110 VEPTVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDFGRPAQFTCKYEGNPVKTISWM 169
+ P+ I G F C+ +
Sbjct: 5 IVPSQGEISVGESKFFLCQVAGDAKD-----KDISWFSPNGEKLSPN-----------QQ 48
Query: 170 KDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQ-ESAQASGELK 214
+ D + I + +D G+Y+CV+ E ++A+ +K
Sbjct: 49 RISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVK 94
Score = 28.9 bits (63), Expect = 0.23
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVK-------QVSGTLIIKEAKVEDSGK 82
GES LC+ + K I S ++ + S TL I A ++D+G
Sbjct: 15 GESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGI 74
Query: 83 YLCVVNNSVGGESVETV-LTV 102
Y CVV G +S TV + +
Sbjct: 75 YKCVVTAEDGTQSEATVNVKI 95
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 31.1 bits (70), Expect = 0.031
Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 11/77 (14%)
Query: 139 VEPTV-----QTIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPVFRIDSVRKE 191
VEPTV +T C + W ++ + + +
Sbjct: 1 VEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVST----PLIRN 56
Query: 192 DKGMYQCVIRNEQESAQ 208
+Q ++ E +
Sbjct: 57 GDWTFQILVMLEMTPQR 73
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 31.0 bits (69), Expect = 0.035
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
GE+ L C + ++ + + + + I +A SG Y C N
Sbjct: 15 GETIVLRCHSWKDKPLVKV----TFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNI 70
Query: 90 SVGGESVETV-LTVTAP 105
S + V +TV AP
Sbjct: 71 GYTLYSSKPVTITVQAP 87
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 118
Score = 31.4 bits (70), Expect = 0.036
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVE---TVLTVT 103
L++K+ K EDSG Y S ++ T +TVT
Sbjct: 78 VCNLLLKDLKPEDSGTYNFRFEISDSNRWLDVKGTTVTVT 117
>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 30.7 bits (69), Expect = 0.046
Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVP-----DHNEPVFRIDSVRKEDKGMYQC 198
G TC P S K+G+ + F + V G+Y+C
Sbjct: 19 GENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRC 73
>d1xmwa2 b.1.1.4 (A:113-178) CD3 epsilon chain ectodomain fragment
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 66
Score = 30.1 bits (68), Expect = 0.046
Identities = 7/45 (15%), Positives = 18/45 (40%)
Query: 164 KTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQ 208
+I+ ++ + + ++ +GMYQC + + Q
Sbjct: 17 SSITLLQGTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQ 61
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 30.4 bits (68), Expect = 0.058
Identities = 14/77 (18%), Positives = 21/77 (27%), Gaps = 11/77 (14%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVP----------DHNEPVFRIDSVRKEDKGMYQC 198
+ C+ M + +P F ID + G YQC
Sbjct: 21 DGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQC 79
Query: 199 VIRNEQESAQASGELKL 215
R + S L+L
Sbjct: 80 QYRIGHYRFRYSDTLEL 96
>d1xiwb_ b.1.1.4 (B:) CD3 delta chain ectodomain fragment {Human
(Homo sapiens) [TaxId: 9606]}
Length = 74
Score = 29.8 bits (67), Expect = 0.066
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 164 KTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 198
+I+W++ + + + +G+Y+C
Sbjct: 18 TSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRC 52
>d1jbja1 b.1.1.4 (A:101-186) CD3 gamma chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 86
Score = 29.9 bits (67), Expect = 0.079
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 163 VKTISWMKDGKPV--PDHNEPVFRIDSVRKEDKGMYQCVIRNEQES 206
KTI W+KDG + + + + + + K+ +G YQC E +
Sbjct: 33 DKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSN 78
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 30.0 bits (67), Expect = 0.084
Identities = 11/84 (13%), Positives = 19/84 (22%), Gaps = 19/84 (22%)
Query: 139 VEPTVQ-----TIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPV--------- 182
V P V T C G + W ++G+
Sbjct: 3 VYPEVTVYPAKTQPLQHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWT 62
Query: 183 FRIDS---VRKEDKGMYQCVIRNE 203
F+ +Y C + +
Sbjct: 63 FQTLVMLETVPRSGEVYTCQVEHP 86
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 30.0 bits (67), Expect = 0.086
Identities = 5/33 (15%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 183 FRIDSVRKEDKGMYQC-VIRNEQESAQASGELK 214
+ +D G+Y + QA+
Sbjct: 73 LLFQMITMKDMGVYTLDMTDENYRRTQATVRFH 105
Score = 29.3 bits (65), Expect = 0.17
Identities = 5/35 (14%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 69 TLIIKEAKVEDSGKYLC-VVNNSVGGESVETVLTV 102
+L+ + ++D G Y + + + V
Sbjct: 72 SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 29.6 bits (66), Expect = 0.12
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 139 VEPTVQ-----TIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPVFRIDSVRKE 191
V P V ++ G P C + PV ++W+++G+PV +
Sbjct: 4 VAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSET----VFLPR 59
Query: 192 DKGMYQCVIRNEQESAQ 208
D +++ +
Sbjct: 60 DDHLFRKFHYLTFLPST 76
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 29.6 bits (65), Expect = 0.14
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 65 QVSGTLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLAAGVEP 112
Q +G L I + + D G Y C + + ++V + + L+ E
Sbjct: 58 QTTGNLYIAKTEASDLGNYSCFATSHI-DFITKSVFSKFSQLSLAAED 104
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 29.4 bits (65), Expect = 0.17
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 36 LCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNSVGG-- 93
A N + E + + + + + K + L I++A++ D+G+Y +
Sbjct: 53 APVATNNPAWAVQEETRDRFHLLGDPQTKNCT--LSIRDARMSDAGRYFFRMEKGNIKWN 110
Query: 94 -ESVETVLTVT 103
+ + + VT
Sbjct: 111 YKYDQLSVNVT 121
Score = 25.5 bits (55), Expect = 3.6
Identities = 14/96 (14%), Positives = 22/96 (22%), Gaps = 13/96 (13%)
Query: 113 TVQTIDFGRPAQFTCKYEISPPLAAGVEPTVQTIDF-----GRPAQFTCKYEGNPVKTIS 167
TVQ G C + S P+ + + + +
Sbjct: 12 TVQE---GMCVHVRCSF--SYPVDSQTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQE 66
Query: 168 WMKD---GKPVPDHNEPVFRIDSVRKEDKGMYQCVI 200
+D P I R D G Y +
Sbjct: 67 ETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFFRM 102
>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human
(Homo sapiens) [TaxId: 9606]}
Length = 116
Score = 29.4 bits (65), Expect = 0.18
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVETVLTVT 103
+ I + +DSG+Y C + + G S + L V
Sbjct: 75 VVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVL 109
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 27.7 bits (61), Expect = 0.43
Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 13/75 (17%)
Query: 139 VEPTVQTIDFGRPAQFTC---KYEGNPVKTISWMKDGKPVPDHNEPV-------FRIDSV 188
+P+V C ++ + I+ + K V +
Sbjct: 5 TKPSVFV--MKNGTNVACLVKEFYPKDI-RINLVSSKKITEFDPAIVISPSGKYNAVKLG 61
Query: 189 RKEDKGMYQCVIRNE 203
+ ED C ++++
Sbjct: 62 KYEDSNSVTCSVQHD 76
>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 27.3 bits (60), Expect = 0.63
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 7/74 (9%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVPDH-------NEPVFRIDSVRKEDKGMYQCVIR 201
+ C+ V+ + D N+ F I + G Y C+ R
Sbjct: 18 EKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR 77
Query: 202 NEQESAQASGELKL 215
+ ++ S L L
Sbjct: 78 VGELWSEPSNLLDL 91
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 27.3 bits (59), Expect = 0.87
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 72 IKEAKVEDSGKYLCVVNNSVGGESVETVLTV 102
+ + V D KY+C N+ E V V
Sbjct: 70 VTKEDVSDIYKYVCTAKNAAVDEEVVLVEYE 100
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus),
alpha-chain [TaxId: 10090]}
Length = 113
Score = 27.1 bits (59), Expect = 1.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVGGESVE----TVLTV 102
TL I++A++EDSG Y C S G + T LTV
Sbjct: 70 YSTLHIRDAQLEDSGTYFCAAEASSGSWQLIFGSGTQLTV 109
>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 27.0 bits (59), Expect = 1.2
Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 12/75 (16%)
Query: 40 QENMWFKFIEGSSRKVAVPLNDRVK------QVSGTLIIKEAKVEDSGKYLCVVNNSVGG 93
S+++ V S T ++ V + Y C +
Sbjct: 43 SAVEVCVVYGNYSQQLQVYSKTGFNCDGKLGNESVTFYLQNLYVNQTDIYFCKIEVMYPP 102
Query: 94 ESVE------TVLTV 102
++ T++ V
Sbjct: 103 PYLDNEKSNGTIIHV 117
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 26.6 bits (58), Expect = 1.3
Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 12/73 (16%)
Query: 149 GRPAQFTCKYEGNPVKTISWMKDGKPVP-----------DHNEPVFRIDSVRKEDKGMYQ 197
G C + K+G+ + +F + V + Y+
Sbjct: 18 GGNVTLQCDSQV-AFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYR 76
Query: 198 CVIRNEQESAQAS 210
C + + S
Sbjct: 77 CYAYDSNSPYEWS 89
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 26.1 bits (57), Expect = 2.0
Identities = 8/47 (17%), Positives = 16/47 (34%)
Query: 164 KTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQCVIRNEQESAQAS 210
+ G+ ++ F I + ++ G Y+C Q S
Sbjct: 40 FNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVS 86
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 25.4 bits (54), Expect = 2.8
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Query: 30 GESFALLCEAQENMWFKFIEGSSRKVAVPLNDRVKQVSGTLIIKEAKVEDSGKYLCVVNN 89
G+S L E+ + Q TL + + +++DSG + C V
Sbjct: 14 GQSLTLTLESPPGSSPSVQ-------CRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQ 66
Query: 90 SVGGESVETVLTVTAP 105
+ + + V A
Sbjct: 67 NQKKVEFKIDIVVLAF 82
>d1ow0a2 b.1.1.2 (A:343-450) Immunoglobulin heavy chain alpha
constant domain 3, CH3-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 108
Score = 25.8 bits (56), Expect = 3.2
Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 132 SPPLAAGVEPTVQTIDFGRPAQFTCKYEG-NPVK-TISWMKDGKPVPDHNEPVFRIDSVR 189
P + P + + TC G +P + W++ + +P +
Sbjct: 3 FRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEP 62
Query: 190 KEDKGMYQ 197
+ +
Sbjct: 63 SQGTTTFA 70
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 110
Score = 25.7 bits (56), Expect = 3.3
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 37 CEAQENMWFKFIEGSSRKVAVP---LNDRVKQVSGTLIIKEAKVEDSGKYLCVVNNS 90
+ + + G++ K +P R Q +LI++ A + Y C
Sbjct: 40 GHGLRLIHYSYGVGNTEKGDIPDGYEASRPSQEQFSLILESATPSQTSVYFCASGGG 96
>d1ogae2 b.1.1.2 (E:119-245) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 127
Score = 25.9 bits (56), Expect = 3.7
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 131 ISPPLAAGVEPTVQTIDFGRPAQFTCKYEGN--PVKTISWMKDGKPVPDHNE 180
+ PP A EP+ I + A C G +SW +GK V
Sbjct: 2 VFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVS 53
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 25.3 bits (55), Expect = 4.0
Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 11/77 (14%)
Query: 139 VEPTVQ-----TIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPVFRIDSVRKE 191
P+VQ + P C G TI+W K+GK V + + +
Sbjct: 2 RPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMHSSAH----KTAQPN 57
Query: 192 DKGMYQCVIRNEQESAQ 208
YQ + +
Sbjct: 58 GDWTYQTLSHLALTPSY 74
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 25.4 bits (54), Expect = 4.1
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGG-ESVETVLTVTAP 105
L I K ED+G+Y C ++N V S L +
Sbjct: 57 ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFD 94
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.1 bits (55), Expect = 4.3
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 6/40 (15%)
Query: 169 MKDGKPVPDHNEPV------FRIDSVRKEDKGMYQCVIRN 202
+PD + F I + ++ G+ C
Sbjct: 41 FPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLTCEATV 80
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 24.9 bits (54), Expect = 4.6
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 11/75 (14%)
Query: 141 PTVQ-----TIDFGRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDK 193
P V + G+P C + PV I+W+ +G+ V + S +
Sbjct: 6 PEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSET----SFLSKSD 61
Query: 194 GMYQCVIRNEQESAQ 208
+ + +
Sbjct: 62 HSFFKISYLTFLPSA 76
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 25.1 bits (54), Expect = 5.4
Identities = 7/39 (17%), Positives = 12/39 (30%), Gaps = 4/39 (10%)
Query: 69 TLIIKEAKVEDSGKYLCVVNNSVGGESVE----TVLTVT 103
L + A + Y C + + + LTV
Sbjct: 73 PLRLLSAAPSQTSVYFCASSYVGNTGELFFGEGSRLTVL 111
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase,
C-terminal domain {Arthrobacter globiformis [TaxId:
1665]}
Length = 88
Score = 24.4 bits (53), Expect = 7.5
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 169 MKDGKPVPDHNEPVFR 184
+ DG+ + EPVF
Sbjct: 9 IDDGRSIVLGKEPVFY 24
>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 24.5 bits (53), Expect = 8.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 67 SGTLIIKEAKVEDSGKYLCVVNNSVG 92
+GTL IK K +D Y + ++ G
Sbjct: 62 NGTLKIKHLKTDDQDIYKVSIYDTKG 87
>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144, alpha-3
domain {Murine cytomegalovirus [TaxId: 10366]}
Length = 98
Score = 24.3 bits (52), Expect = 8.1
Identities = 7/34 (20%), Positives = 10/34 (29%)
Query: 165 TISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQC 198
I W KD + + G+YQ
Sbjct: 32 EIRWWKDDGGGGALPQTSKQHHDPLPSGNGLYQK 65
>d3b5ha2 b.1.1.4 (A:23-102) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 24.0 bits (52), Expect = 8.2
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 76 KVEDSGKYLCVVNNSVGGESVETV 99
+ G+Y CV G + +
Sbjct: 56 SDDQWGEYSCVFLPEPMGTANIQL 79
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 24.2 bits (52), Expect = 8.3
Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Query: 149 GRPAQFTCKYEG--NPVKTISWMKDGKPVPDHNEPVFRIDSVRKEDKGMYQ 197
A C G T++W +DG+ E V R +Q
Sbjct: 15 DHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELV----ETRPAGDRTFQ 61
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.135 0.404
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,013,051
Number of extensions: 47688
Number of successful extensions: 316
Number of sequences better than 10.0: 1
Number of HSP's gapped: 285
Number of HSP's successfully gapped: 186
Length of query: 267
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 183
Effective length of database: 1,254,276
Effective search space: 229532508
Effective search space used: 229532508
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.4 bits)