Query psy3048
Match_columns 367
No_of_seqs 124 out of 1688
Neff 9.0
Searched_HMMs 46136
Date Sat Aug 17 00:21:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3048.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3048hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 2.6E-51 5.5E-56 403.0 35.5 318 1-355 208-537 (539)
2 PLN02880 tyrosine decarboxylas 100.0 2.6E-49 5.7E-54 388.6 34.7 316 1-353 160-487 (490)
3 KOG0628|consensus 100.0 7.5E-47 1.6E-51 348.2 28.4 321 1-352 153-473 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 1E-44 2.2E-49 356.9 32.8 309 1-345 173-520 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 1E-42 2.3E-47 331.4 24.3 257 1-291 117-373 (373)
6 KOG0629|consensus 100.0 1.8E-41 4E-46 309.4 20.1 316 1-350 173-509 (510)
7 TIGR01788 Glu-decarb-GAD gluta 100.0 1.6E-38 3.4E-43 307.1 28.7 299 1-351 115-430 (431)
8 COG0076 GadB Glutamate decarbo 100.0 8.2E-37 1.8E-41 295.9 27.5 264 1-310 133-399 (460)
9 PLN02263 serine decarboxylase 100.0 8.9E-37 1.9E-41 293.2 27.2 273 1-351 166-444 (470)
10 TIGR03811 tyr_de_CO2_Ent tyros 100.0 1.8E-35 4E-40 293.5 31.7 288 32-351 224-603 (608)
11 PLN03032 serine decarboxylase; 100.0 1.4E-34 3E-39 274.3 25.2 255 32-347 113-373 (374)
12 PRK02769 histidine decarboxyla 100.0 1E-33 2.2E-38 270.1 27.6 258 31-350 111-372 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 3E-33 6.4E-38 265.7 27.4 270 2-346 72-344 (345)
14 COG0520 csdA Selenocysteine ly 100.0 5.4E-33 1.2E-37 266.3 26.7 279 28-349 109-404 (405)
15 PRK13520 L-tyrosine decarboxyl 100.0 5.2E-28 1.1E-32 231.9 25.4 264 30-349 104-370 (371)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.5E-27 5.4E-32 227.4 25.9 258 31-346 107-372 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 3.6E-27 7.8E-32 218.9 24.6 264 29-353 90-380 (386)
18 PRK10874 cysteine sulfinate de 100.0 1.6E-26 3.5E-31 224.0 27.1 278 29-351 108-399 (401)
19 TIGR03392 FeS_syn_CsdA cystein 100.0 2.4E-26 5.2E-31 222.6 27.7 278 30-351 106-396 (398)
20 KOG1383|consensus 100.0 5.6E-27 1.2E-31 217.6 21.1 298 3-358 150-454 (491)
21 PRK09295 bifunctional cysteine 100.0 4.7E-26 1E-30 221.1 26.2 276 30-349 113-403 (406)
22 TIGR01977 am_tr_V_EF2568 cyste 99.9 6.5E-26 1.4E-30 217.9 26.5 271 29-346 85-375 (376)
23 PLN02855 Bifunctional selenocy 99.9 1.6E-25 3.5E-30 218.6 27.3 278 30-351 122-419 (424)
24 TIGR03403 nifS_epsilon cystein 99.9 2.8E-25 6E-30 214.0 28.3 263 30-353 90-378 (382)
25 TIGR01979 sufS cysteine desulf 99.9 1.3E-25 2.8E-30 217.8 26.2 279 29-351 107-402 (403)
26 TIGR03402 FeS_nifS cysteine de 99.9 1.4E-25 3E-30 215.9 25.6 262 30-352 86-374 (379)
27 TIGR00461 gcvP glycine dehydro 99.9 1.7E-25 3.7E-30 229.5 27.2 294 2-353 561-870 (939)
28 PRK05367 glycine dehydrogenase 99.9 1.5E-25 3.2E-30 233.6 26.9 292 2-353 573-878 (954)
29 TIGR01814 kynureninase kynuren 99.9 3.1E-25 6.7E-30 215.3 27.1 277 30-348 113-405 (406)
30 PF00266 Aminotran_5: Aminotra 99.9 1.8E-25 3.9E-30 214.5 23.9 269 28-340 86-371 (371)
31 PLN02651 cysteine desulfurase 99.9 4.3E-25 9.4E-30 211.3 23.6 248 30-338 88-364 (364)
32 PRK04366 glycine dehydrogenase 99.9 6.4E-25 1.4E-29 216.7 24.8 292 30-365 161-463 (481)
33 cd06453 SufS_like Cysteine des 99.9 1.7E-24 3.7E-29 207.8 24.7 272 29-344 87-373 (373)
34 TIGR02006 IscS cysteine desulf 99.9 3.4E-24 7.4E-29 207.8 25.6 263 29-352 91-379 (402)
35 PLN02409 serine--glyoxylate am 99.9 4.6E-24 9.9E-29 206.6 26.1 281 31-354 85-376 (401)
36 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.2E-24 9.1E-29 206.8 25.9 258 30-344 104-397 (397)
37 PLN02414 glycine dehydrogenase 99.9 3.1E-24 6.7E-29 222.8 26.2 285 29-353 615-910 (993)
38 cd06451 AGAT_like Alanine-glyo 99.9 3.5E-24 7.6E-29 204.4 23.4 272 30-349 74-356 (356)
39 TIGR02326 transamin_PhnW 2-ami 99.9 1.8E-23 3.9E-28 200.1 27.1 276 29-348 78-360 (363)
40 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.7E-23 1.4E-27 197.7 29.6 270 30-352 102-383 (387)
41 COG0075 Serine-pyruvate aminot 99.9 2.1E-23 4.5E-28 195.2 23.9 282 31-357 81-370 (383)
42 PRK02948 cysteine desulfurase; 99.9 1.2E-22 2.7E-27 195.5 25.1 263 30-354 88-378 (381)
43 PRK14012 cysteine desulfurase; 99.9 1.6E-22 3.5E-27 196.2 26.0 263 30-352 94-381 (404)
44 PRK13479 2-aminoethylphosphona 99.9 3.1E-22 6.7E-27 191.9 27.3 277 30-351 81-364 (368)
45 PRK12566 glycine dehydrogenase 99.9 2.3E-22 4.9E-27 205.4 25.9 296 2-351 574-877 (954)
46 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 6.3E-22 1.4E-26 188.5 27.1 274 30-347 75-354 (355)
47 cd00613 GDC-P Glycine cleavage 99.9 1.4E-22 3.1E-27 196.2 22.7 280 30-344 108-398 (398)
48 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.4E-21 5.2E-26 185.8 28.0 267 30-350 90-368 (370)
49 PRK03080 phosphoserine aminotr 99.9 2.1E-22 4.6E-27 193.4 20.2 267 37-352 98-375 (378)
50 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5E-21 1.1E-25 183.1 29.2 266 30-348 83-360 (361)
51 TIGR03531 selenium_SpcS O-phos 99.9 5.3E-22 1.2E-26 191.5 20.6 261 29-347 151-443 (444)
52 KOG1549|consensus 99.9 2.2E-21 4.8E-26 181.1 18.5 264 32-352 133-420 (428)
53 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-20 2.3E-25 180.3 21.8 226 30-313 88-319 (353)
54 PTZ00094 serine hydroxymethylt 99.9 8.6E-21 1.9E-25 186.4 20.9 263 30-351 124-409 (452)
55 COG1003 GcvP Glycine cleavage 99.9 4.8E-20 1E-24 170.2 23.7 294 1-355 139-452 (496)
56 PRK00451 glycine dehydrogenase 99.9 9.9E-21 2.1E-25 186.1 20.2 279 29-348 153-446 (447)
57 COG0156 BioF 7-keto-8-aminopel 99.9 7.3E-20 1.6E-24 172.9 23.6 259 29-347 122-387 (388)
58 PLN02724 Molybdenum cofactor s 99.9 4E-20 8.7E-25 192.8 23.4 288 31-349 123-487 (805)
59 PLN02721 threonine aldolase 99.9 5.7E-20 1.2E-24 175.0 22.6 262 30-349 80-351 (353)
60 COG1103 Archaea-specific pyrid 99.9 1.2E-19 2.5E-24 158.0 21.7 285 7-351 85-381 (382)
61 PRK13580 serine hydroxymethylt 99.9 2.9E-20 6.3E-25 179.8 19.1 256 37-351 176-446 (493)
62 KOG2862|consensus 99.8 2.8E-19 6E-24 158.5 22.2 261 46-350 110-382 (385)
63 TIGR01364 serC_1 phosphoserine 99.8 4.3E-20 9.4E-25 175.1 18.3 244 44-350 96-348 (349)
64 PRK05355 3-phosphoserine/phosp 99.8 2.3E-20 5E-25 177.8 16.4 256 32-350 96-358 (360)
65 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.3E-19 2.8E-24 172.4 21.1 262 30-345 58-352 (352)
66 TIGR01822 2am3keto_CoA 2-amino 99.8 8.2E-19 1.8E-23 169.7 26.7 262 31-351 123-390 (393)
67 PRK07179 hypothetical protein; 99.8 7.6E-19 1.7E-23 170.7 25.3 259 31-354 139-402 (407)
68 cd00611 PSAT_like Phosphoserin 99.8 9.5E-20 2.1E-24 173.7 17.2 257 31-348 91-354 (355)
69 PRK05937 8-amino-7-oxononanoat 99.8 1.8E-18 3.8E-23 166.0 25.7 260 30-356 95-356 (370)
70 cd00609 AAT_like Aspartate ami 99.8 5.2E-19 1.1E-23 167.5 20.8 259 30-346 83-350 (350)
71 KOG1360|consensus 99.8 7.4E-19 1.6E-23 160.4 20.5 269 26-355 253-529 (570)
72 TIGR01437 selA_rel uncharacter 99.8 3.1E-18 6.7E-23 163.6 24.4 250 32-347 101-362 (363)
73 COG3844 Kynureninase [Amino ac 99.8 1.2E-18 2.7E-23 155.4 19.0 246 62-352 151-404 (407)
74 COG0399 WecE Predicted pyridox 99.8 4.5E-18 9.6E-23 159.7 23.5 271 30-350 74-373 (374)
75 cd06454 KBL_like KBL_like; thi 99.8 6.4E-18 1.4E-22 160.6 24.9 257 31-347 86-348 (349)
76 TIGR01366 serC_3 phosphoserine 99.8 9E-19 1.9E-23 167.1 17.0 226 84-351 129-361 (361)
77 COG2008 GLY1 Threonine aldolas 99.8 2.7E-18 5.9E-23 156.6 18.5 259 28-348 72-341 (342)
78 cd06502 TA_like Low-specificit 99.8 1.1E-18 2.3E-23 165.3 16.6 255 30-346 71-337 (338)
79 PLN02483 serine palmitoyltrans 99.8 2.4E-17 5.2E-22 163.1 26.4 271 30-357 185-473 (489)
80 PLN03226 serine hydroxymethylt 99.8 8.4E-18 1.8E-22 165.1 21.8 267 38-351 138-420 (475)
81 COG0436 Aspartate/tyrosine/aro 99.8 9.5E-18 2.1E-22 161.2 21.6 262 32-350 115-391 (393)
82 PRK13392 5-aminolevulinate syn 99.8 2.5E-17 5.4E-22 160.2 24.6 262 30-353 132-400 (410)
83 PLN02955 8-amino-7-oxononanoat 99.8 3.4E-17 7.4E-22 158.4 25.0 257 29-354 199-465 (476)
84 TIGR01821 5aminolev_synth 5-am 99.8 2.4E-17 5.1E-22 160.0 24.0 261 30-352 131-398 (402)
85 PRK09064 5-aminolevulinate syn 99.8 4.5E-17 9.8E-22 158.3 24.7 262 29-352 131-399 (407)
86 PLN02822 serine palmitoyltrans 99.8 2.1E-16 4.6E-21 156.0 28.7 266 30-352 193-479 (481)
87 PRK00011 glyA serine hydroxyme 99.8 1.7E-17 3.7E-22 161.7 20.6 262 30-350 111-389 (416)
88 PRK06108 aspartate aminotransf 99.8 3.2E-17 7E-22 157.9 21.9 258 32-349 110-381 (382)
89 PRK05764 aspartate aminotransf 99.8 7.9E-17 1.7E-21 155.8 24.4 261 30-351 115-392 (393)
90 PRK06939 2-amino-3-ketobutyrat 99.8 1.5E-16 3.3E-21 153.8 26.3 263 30-351 126-394 (397)
91 PRK13034 serine hydroxymethylt 99.8 3.4E-17 7.4E-22 159.1 21.5 262 30-350 114-392 (416)
92 cd00378 SHMT Serine-glycine hy 99.8 2.9E-17 6.3E-22 159.3 20.8 261 31-350 106-385 (402)
93 PRK08361 aspartate aminotransf 99.8 3.6E-17 7.8E-22 158.1 21.0 263 30-350 117-390 (391)
94 TIGR01141 hisC histidinol-phos 99.8 7E-17 1.5E-21 153.5 22.2 245 31-345 96-346 (346)
95 PRK05958 8-amino-7-oxononanoat 99.8 1.4E-16 3.1E-21 153.3 24.4 253 31-347 124-384 (385)
96 TIGR03588 PseC UDP-4-keto-6-de 99.8 9.1E-17 2E-21 154.7 22.5 277 30-347 69-379 (380)
97 COG1168 MalY Bifunctional PLP- 99.8 1.3E-16 2.8E-21 146.1 21.1 265 30-350 108-386 (388)
98 PRK13393 5-aminolevulinate syn 99.8 5.4E-16 1.2E-20 150.6 25.8 260 30-351 131-397 (406)
99 PRK05367 glycine dehydrogenase 99.7 1.6E-16 3.4E-21 166.3 23.0 258 31-345 166-437 (954)
100 TIGR00858 bioF 8-amino-7-oxono 99.7 6.7E-16 1.5E-20 147.2 24.8 253 31-345 101-360 (360)
101 PRK07324 transaminase; Validat 99.7 8.1E-16 1.8E-20 147.7 25.0 257 32-350 106-370 (373)
102 KOG1359|consensus 99.7 2.7E-16 5.8E-21 138.6 18.9 258 29-351 150-413 (417)
103 PRK11658 UDP-4-amino-4-deoxy-L 99.7 2.5E-16 5.4E-21 151.5 20.5 276 30-348 73-377 (379)
104 PRK05957 aspartate aminotransf 99.7 6E-16 1.3E-20 149.5 23.2 261 30-351 113-386 (389)
105 PRK15029 arginine decarboxylas 99.7 6.3E-16 1.4E-20 157.2 24.2 137 30-167 245-402 (755)
106 TIGR01329 cysta_beta_ly_E cyst 99.7 2.5E-16 5.5E-21 151.2 20.3 244 32-351 87-376 (378)
107 PF01041 DegT_DnrJ_EryC1: DegT 99.7 4.8E-16 1E-20 148.7 21.9 269 28-345 63-363 (363)
108 cd00615 Orn_deC_like Ornithine 99.7 2.1E-17 4.4E-22 153.6 11.8 133 29-167 98-236 (294)
109 PRK06207 aspartate aminotransf 99.7 1.2E-15 2.6E-20 148.1 24.6 263 30-351 126-403 (405)
110 PRK05968 hypothetical protein; 99.7 5.6E-16 1.2E-20 149.3 20.8 243 32-351 104-387 (389)
111 PRK06225 aspartate aminotransf 99.7 9.2E-16 2E-20 147.8 22.3 260 31-353 108-379 (380)
112 PRK00950 histidinol-phosphate 99.7 1.1E-15 2.4E-20 146.2 22.3 244 31-348 112-360 (361)
113 PLN02414 glycine dehydrogenase 99.7 5.9E-16 1.3E-20 161.5 21.9 260 30-346 192-465 (993)
114 PLN02509 cystathionine beta-ly 99.7 8.2E-16 1.8E-20 150.1 21.3 242 32-349 173-460 (464)
115 PLN00145 tyrosine/nicotianamin 99.7 1.6E-15 3.6E-20 148.1 23.5 269 31-353 142-427 (430)
116 TIGR01825 gly_Cac_T_rel pyrido 99.7 2.2E-15 4.8E-20 145.3 24.1 258 32-351 119-382 (385)
117 PRK06290 aspartate aminotransf 99.7 2E-15 4.3E-20 146.6 23.7 264 30-352 130-407 (410)
118 PRK08861 cystathionine gamma-s 99.7 1.3E-15 2.8E-20 146.2 21.9 247 32-353 94-386 (388)
119 PRK08134 O-acetylhomoserine am 99.7 1E-15 2.3E-20 148.9 21.0 275 32-352 105-429 (433)
120 PRK08056 threonine-phosphate d 99.7 3E-15 6.4E-20 143.0 23.5 246 36-349 100-354 (356)
121 PRK06767 methionine gamma-lyas 99.7 9.3E-16 2E-20 147.8 20.1 244 32-350 102-385 (386)
122 PRK08114 cystathionine beta-ly 99.7 1.9E-15 4.2E-20 144.6 22.0 244 32-351 103-394 (395)
123 PLN02271 serine hydroxymethylt 99.7 1.5E-15 3.2E-20 147.9 21.3 260 48-349 265-539 (586)
124 PRK08776 cystathionine gamma-s 99.7 2.4E-15 5.1E-20 145.5 22.7 246 32-352 101-392 (405)
125 TIGR01265 tyr_nico_aTase tyros 99.7 6.5E-15 1.4E-19 142.9 25.6 267 30-350 120-401 (403)
126 PRK08064 cystathionine beta-ly 99.7 1.8E-15 3.9E-20 145.8 21.6 202 32-304 94-318 (390)
127 PRK07504 O-succinylhomoserine 99.7 1.4E-15 3E-20 146.9 20.8 247 32-352 106-397 (398)
128 PLN00175 aminotransferase fami 99.7 2E-15 4.3E-20 146.9 21.9 261 30-349 139-412 (413)
129 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.3E-15 5E-20 144.4 21.9 272 29-348 70-375 (376)
130 PRK13238 tnaA tryptophanase/L- 99.7 4.5E-15 9.7E-20 145.5 24.4 270 29-350 117-433 (460)
131 PRK02731 histidinol-phosphate 99.7 2.5E-15 5.5E-20 144.0 22.3 249 31-349 109-365 (367)
132 cd00614 CGS_like CGS_like: Cys 99.7 7.6E-16 1.7E-20 147.6 18.6 243 31-348 80-368 (369)
133 PLN03227 serine palmitoyltrans 99.7 1.1E-14 2.5E-19 140.5 26.9 265 30-352 82-384 (392)
134 PRK07682 hypothetical protein; 99.7 1.7E-15 3.6E-20 145.8 21.0 260 30-351 105-377 (378)
135 PF00155 Aminotran_1_2: Aminot 99.7 8.8E-16 1.9E-20 146.8 18.9 258 29-344 92-363 (363)
136 PRK14807 histidinol-phosphate 99.7 9.7E-15 2.1E-19 139.1 25.3 245 32-348 102-350 (351)
137 PTZ00377 alanine aminotransfer 99.7 1.6E-14 3.5E-19 143.2 27.6 273 29-352 162-477 (481)
138 PRK08912 hypothetical protein; 99.7 4.6E-15 1E-19 143.2 23.1 260 30-349 111-385 (387)
139 PRK05613 O-acetylhomoserine am 99.7 2.3E-15 5.1E-20 146.4 20.8 277 32-350 110-436 (437)
140 PRK07811 cystathionine gamma-s 99.7 3.6E-15 7.8E-20 143.7 21.6 243 32-349 102-387 (388)
141 PRK07681 aspartate aminotransf 99.7 4.5E-15 9.8E-20 143.9 22.5 257 30-347 117-385 (399)
142 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2.1E-16 4.6E-21 150.5 12.7 203 29-281 105-329 (417)
143 TIGR01328 met_gam_lyase methio 99.7 2.6E-15 5.6E-20 144.8 20.1 246 32-350 100-390 (391)
144 PRK13355 bifunctional HTH-doma 99.7 7.2E-15 1.6E-19 146.9 23.9 266 31-351 233-515 (517)
145 TIGR03537 DapC succinyldiamino 99.7 4E-15 8.6E-20 141.8 21.0 252 32-346 89-349 (350)
146 PRK07309 aromatic amino acid a 99.7 1.1E-14 2.4E-19 140.7 24.4 264 31-351 116-389 (391)
147 PLN02187 rooty/superroot1 99.7 8.2E-15 1.8E-19 144.3 23.2 273 30-356 155-444 (462)
148 PRK09082 methionine aminotrans 99.7 2.2E-15 4.7E-20 145.5 18.7 257 30-346 115-385 (386)
149 PTZ00433 tyrosine aminotransfe 99.7 9.3E-15 2E-19 142.2 23.2 264 31-352 129-410 (412)
150 PRK08363 alanine aminotransfer 99.7 8.5E-15 1.9E-19 141.9 22.8 264 30-350 117-394 (398)
151 PRK08249 cystathionine gamma-s 99.7 5.3E-15 1.1E-19 142.8 21.1 247 32-353 105-396 (398)
152 TIGR01264 tyr_amTase_E tyrosin 99.7 1.6E-14 3.5E-19 140.1 24.4 265 32-351 121-400 (401)
153 TIGR03540 DapC_direct LL-diami 99.7 9.6E-15 2.1E-19 140.8 22.4 256 29-345 114-381 (383)
154 PRK09265 aminotransferase AlaT 99.7 1.4E-14 3E-19 140.7 23.4 265 31-350 120-401 (404)
155 KOG1368|consensus 99.7 2.2E-15 4.9E-20 133.1 16.1 256 29-346 95-364 (384)
156 PRK01688 histidinol-phosphate 99.7 4E-15 8.6E-20 141.8 19.3 248 31-345 100-351 (351)
157 COG2873 MET17 O-acetylhomoseri 99.7 1.4E-14 3E-19 132.1 21.6 265 43-350 118-425 (426)
158 PRK08133 O-succinylhomoserine 99.7 1E-14 2.2E-19 140.6 22.2 243 32-349 102-389 (390)
159 PRK08045 cystathionine gamma-s 99.7 1.7E-14 3.7E-19 138.7 23.5 248 31-353 92-385 (386)
160 PRK07550 hypothetical protein; 99.7 1.5E-14 3.3E-19 139.6 23.1 259 30-347 114-384 (386)
161 PRK08247 cystathionine gamma-s 99.7 7.4E-15 1.6E-19 140.6 20.4 243 32-350 92-364 (366)
162 PRK06176 cystathionine gamma-s 99.7 7.3E-15 1.6E-19 141.0 20.4 245 31-351 89-379 (380)
163 PRK05387 histidinol-phosphate 99.7 3.5E-14 7.6E-19 135.3 25.0 246 32-349 103-352 (353)
164 PLN03026 histidinol-phosphate 99.7 1.9E-14 4.1E-19 138.6 23.3 248 31-347 128-379 (380)
165 PRK07568 aspartate aminotransf 99.7 2.6E-14 5.6E-19 138.4 24.4 260 32-352 114-394 (397)
166 TIGR01324 cysta_beta_ly_B cyst 99.7 8.7E-15 1.9E-19 140.2 20.7 243 32-350 91-376 (377)
167 PRK09028 cystathionine beta-ly 99.7 8.5E-15 1.8E-19 140.5 20.4 245 32-352 102-389 (394)
168 PRK15407 lipopolysaccharide bi 99.7 1.3E-14 2.9E-19 141.6 22.0 288 30-349 111-435 (438)
169 PRK04870 histidinol-phosphate 99.7 1.6E-14 3.5E-19 137.9 22.2 248 30-347 105-355 (356)
170 PRK04635 histidinol-phosphate 99.7 9.8E-15 2.1E-19 139.3 20.6 244 31-347 103-352 (354)
171 TIGR01365 serC_2 phosphoserine 99.7 7E-15 1.5E-19 139.9 19.3 250 45-348 99-371 (374)
172 PRK08248 O-acetylhomoserine am 99.7 8.6E-15 1.9E-19 142.5 20.3 277 32-352 105-429 (431)
173 PRK07671 cystathionine beta-ly 99.7 8E-15 1.7E-19 140.7 19.8 241 32-348 90-376 (377)
174 PRK07812 O-acetylhomoserine am 99.7 9.3E-15 2E-19 142.1 20.3 277 32-352 110-433 (436)
175 KOG0259|consensus 99.7 1.5E-14 3.3E-19 131.9 20.2 271 30-353 150-436 (447)
176 PLN02656 tyrosine transaminase 99.7 1.9E-14 4.1E-19 140.0 22.2 262 31-350 121-403 (409)
177 PRK07810 O-succinylhomoserine 99.7 1.3E-14 2.8E-19 140.4 20.8 242 32-348 111-402 (403)
178 PRK05942 aspartate aminotransf 99.7 2.1E-14 4.5E-19 139.0 22.3 254 30-348 121-387 (394)
179 PLN02452 phosphoserine transam 99.7 1.5E-14 3.2E-19 137.5 20.7 249 38-350 103-363 (365)
180 PRK08574 cystathionine gamma-s 99.7 1.2E-14 2.6E-19 139.8 20.2 244 31-350 93-384 (385)
181 PRK06836 aspartate aminotransf 99.6 2.3E-14 4.9E-19 138.8 22.2 260 31-350 121-391 (394)
182 PRK07777 aminotransferase; Val 99.6 2.5E-14 5.4E-19 138.1 22.1 256 32-347 111-383 (387)
183 TIGR01140 L_thr_O3P_dcar L-thr 99.6 2.3E-14 5E-19 135.4 21.2 235 32-345 88-330 (330)
184 PRK06348 aspartate aminotransf 99.6 3.4E-14 7.4E-19 137.1 22.8 258 30-347 113-382 (384)
185 PRK07269 cystathionine gamma-s 99.6 6.7E-15 1.4E-19 140.4 17.6 215 64-349 123-363 (364)
186 PRK08068 transaminase; Reviewe 99.6 3.2E-14 7E-19 137.5 22.4 257 29-346 117-385 (389)
187 PRK07503 methionine gamma-lyas 99.6 3.2E-14 7E-19 137.7 22.3 246 32-351 106-397 (403)
188 PRK03158 histidinol-phosphate 99.6 2.7E-14 5.9E-19 136.4 21.6 247 30-347 105-358 (359)
189 PRK09276 LL-diaminopimelate am 99.6 3.4E-14 7.5E-19 137.1 22.3 256 30-346 117-384 (385)
190 PRK05994 O-acetylhomoserine am 99.6 2.2E-14 4.8E-19 139.7 21.1 277 31-350 103-426 (427)
191 PRK06358 threonine-phosphate d 99.6 5.8E-14 1.3E-18 134.0 23.5 248 32-348 95-353 (354)
192 PRK12414 putative aminotransfe 99.6 1.7E-14 3.8E-19 139.1 20.1 254 31-346 115-383 (384)
193 PLN02242 methionine gamma-lyas 99.6 3E-14 6.6E-19 138.2 21.8 244 32-351 117-416 (418)
194 PF05889 SLA_LP_auto_ag: Solub 99.6 4.7E-15 1E-19 138.0 15.0 263 32-349 103-389 (389)
195 PRK06234 methionine gamma-lyas 99.6 4.3E-14 9.2E-19 136.8 22.3 246 32-351 105-398 (400)
196 PLN02376 1-aminocyclopropane-1 99.6 7E-14 1.5E-18 138.6 24.2 268 30-352 143-440 (496)
197 PLN00143 tyrosine/nicotianamin 99.6 5.1E-14 1.1E-18 136.9 22.8 271 31-352 122-406 (409)
198 TIGR02080 O_succ_thio_ly O-suc 99.6 5.5E-14 1.2E-18 135.1 22.7 244 32-350 92-381 (382)
199 PRK07050 cystathionine beta-ly 99.6 2.6E-14 5.6E-19 137.9 20.4 245 31-351 105-392 (394)
200 PRK06107 aspartate aminotransf 99.6 4.5E-14 9.7E-19 137.0 22.1 262 30-351 117-401 (402)
201 PLN02450 1-aminocyclopropane-1 99.6 9.9E-14 2.1E-18 136.9 24.8 267 30-352 135-432 (468)
202 PRK08960 hypothetical protein; 99.6 3.5E-14 7.6E-19 137.1 21.0 259 29-348 115-385 (387)
203 PRK05166 histidinol-phosphate 99.6 8.7E-14 1.9E-18 133.6 23.4 252 30-349 112-370 (371)
204 PRK15400 lysine decarboxylase 99.6 3.5E-14 7.5E-19 143.2 21.2 265 29-350 234-559 (714)
205 PRK15481 transcriptional regul 99.6 5E-14 1.1E-18 138.0 21.9 255 31-348 166-429 (431)
206 PRK06084 O-acetylhomoserine am 99.6 4.6E-14 1E-18 137.3 21.4 278 32-351 99-423 (425)
207 PRK07582 cystathionine gamma-l 99.6 4.2E-14 9.1E-19 135.3 20.5 188 31-291 90-300 (366)
208 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 2.6E-14 5.7E-19 137.3 19.2 266 30-348 71-374 (375)
209 TIGR00461 gcvP glycine dehydro 99.6 9.7E-14 2.1E-18 143.4 24.4 265 30-345 153-426 (939)
210 PRK07908 hypothetical protein; 99.6 5.3E-14 1.1E-18 134.0 21.0 241 35-349 101-346 (349)
211 TIGR01325 O_suc_HS_sulf O-succ 99.6 3.8E-14 8.2E-19 136.3 20.1 240 32-347 95-379 (380)
212 PRK09105 putative aminotransfe 99.6 9.8E-14 2.1E-18 133.1 22.7 244 31-348 120-368 (370)
213 PRK08153 histidinol-phosphate 99.6 1.6E-13 3.5E-18 131.6 24.1 257 30-353 108-368 (369)
214 PRK07337 aminotransferase; Val 99.6 7.5E-14 1.6E-18 134.9 21.8 253 30-347 114-386 (388)
215 PRK00854 rocD ornithine--oxo-a 99.6 2.6E-13 5.7E-18 131.6 25.3 217 66-348 176-399 (401)
216 PRK10534 L-threonine aldolase; 99.6 2.8E-14 6.1E-19 134.9 18.1 250 32-349 75-332 (333)
217 PRK03244 argD acetylornithine 99.6 1.6E-13 3.5E-18 133.0 23.6 219 66-352 172-396 (398)
218 PRK06425 histidinol-phosphate 99.6 1.5E-13 3.3E-18 129.9 22.9 243 31-348 81-331 (332)
219 PLN02607 1-aminocyclopropane-1 99.6 3.1E-13 6.7E-18 132.5 25.6 267 31-351 145-438 (447)
220 cd00617 Tnase_like Tryptophana 99.6 9.1E-14 2E-18 134.7 21.5 267 35-351 96-409 (431)
221 PRK13578 ornithine decarboxyla 99.6 1.1E-13 2.3E-18 139.8 22.6 137 29-167 213-371 (720)
222 PRK15399 lysine decarboxylase 99.6 2.2E-13 4.7E-18 137.4 24.5 265 29-349 234-558 (713)
223 PRK04073 rocD ornithine--oxo-a 99.6 3.1E-13 6.7E-18 130.9 24.9 265 2-348 112-395 (396)
224 PRK08636 aspartate aminotransf 99.6 2.5E-13 5.5E-18 131.8 24.1 266 30-350 119-400 (403)
225 PF02347 GDC-P: Glycine cleava 99.6 1.5E-13 3.3E-18 131.0 21.2 262 30-344 154-429 (429)
226 PRK07683 aminotransferase A; V 99.6 2.7E-13 5.9E-18 130.9 23.1 260 30-350 113-383 (387)
227 PRK09147 succinyldiaminopimela 99.6 1.3E-13 2.9E-18 133.4 21.0 253 30-348 117-394 (396)
228 PRK07366 succinyldiaminopimela 99.6 1.4E-13 3.1E-18 132.9 20.9 255 31-347 117-387 (388)
229 PTZ00125 ornithine aminotransf 99.6 1.8E-12 3.8E-17 125.8 28.1 253 30-352 123-397 (400)
230 PRK06460 hypothetical protein; 99.6 2.8E-13 6.1E-18 130.0 22.2 234 42-351 100-375 (376)
231 PRK04781 histidinol-phosphate 99.6 6.1E-13 1.3E-17 127.4 24.0 249 31-348 102-361 (364)
232 PRK07505 hypothetical protein; 99.6 6.3E-13 1.4E-17 129.0 24.4 254 31-350 136-399 (402)
233 PRK03317 histidinol-phosphate 99.6 5.4E-13 1.2E-17 128.0 23.4 248 31-349 113-363 (368)
234 KOG1357|consensus 99.6 1.1E-13 2.3E-18 128.9 17.1 266 29-352 220-504 (519)
235 PRK05939 hypothetical protein; 99.6 2.2E-13 4.7E-18 131.5 20.1 263 32-349 88-395 (397)
236 cd00610 OAT_like Acetyl ornith 99.6 4.8E-13 1E-17 130.2 22.7 258 30-347 123-412 (413)
237 PLN02231 alanine transaminase 99.6 9.6E-13 2.1E-17 131.4 25.1 270 30-351 216-528 (534)
238 TIGR03538 DapC_gpp succinyldia 99.6 5.6E-13 1.2E-17 129.0 22.8 250 32-347 118-392 (393)
239 PRK08175 aminotransferase; Val 99.6 7.7E-13 1.7E-17 128.1 23.8 262 31-350 116-389 (395)
240 PF00464 SHMT: Serine hydroxym 99.6 1.2E-13 2.5E-18 131.2 17.4 247 37-343 120-398 (399)
241 KOG2040|consensus 99.6 1.2E-12 2.5E-17 126.4 23.1 298 1-351 612-919 (1001)
242 PRK05967 cystathionine beta-ly 99.6 5.1E-13 1.1E-17 128.1 20.7 245 31-351 104-392 (395)
243 COG0079 HisC Histidinol-phosph 99.6 1.2E-12 2.5E-17 124.1 22.6 247 32-350 101-354 (356)
244 PRK06855 aminotransferase; Val 99.5 1.2E-12 2.7E-17 128.1 23.4 265 31-351 120-430 (433)
245 PRK06702 O-acetylhomoserine am 99.5 5.3E-13 1.1E-17 129.3 20.2 276 32-349 102-423 (432)
246 TIGR01885 Orn_aminotrans ornit 99.5 6.7E-12 1.4E-16 121.8 28.0 270 2-348 109-400 (401)
247 PRK02610 histidinol-phosphate 99.5 3.2E-12 6.9E-17 122.9 25.4 252 32-351 118-372 (374)
248 PRK03321 putative aminotransfe 99.5 6.8E-13 1.5E-17 126.5 20.5 245 31-349 99-350 (352)
249 KOG3846|consensus 99.5 5.7E-13 1.2E-17 118.5 18.0 276 38-352 167-463 (465)
250 PRK09148 aminotransferase; Val 99.5 1.1E-12 2.5E-17 127.3 21.8 266 31-354 117-394 (405)
251 TIGR03576 pyridox_MJ0158 pyrid 99.5 4.5E-13 9.7E-18 127.1 18.5 243 29-348 95-345 (346)
252 PTZ00376 aspartate aminotransf 99.5 1.1E-12 2.3E-17 127.5 21.5 257 30-350 124-403 (404)
253 PRK04311 selenocysteine syntha 99.5 2.5E-12 5.3E-17 125.8 22.7 126 29-166 164-307 (464)
254 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 1E-12 2.3E-17 127.9 19.7 274 32-348 98-417 (418)
255 PRK01533 histidinol-phosphate 99.5 1.1E-12 2.3E-17 125.7 19.4 246 31-353 106-358 (366)
256 PRK12462 phosphoserine aminotr 99.5 1.4E-12 3E-17 123.1 19.5 212 85-350 145-362 (364)
257 PLN02672 methionine S-methyltr 99.5 2.3E-12 5.1E-17 135.2 22.9 260 31-349 779-1079(1082)
258 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 3.4E-12 7.3E-17 122.1 21.9 243 33-349 97-386 (386)
259 TIGR03246 arg_catab_astC succi 99.5 8.4E-12 1.8E-16 120.9 25.1 270 2-351 107-396 (397)
260 COG0403 GcvP Glycine cleavage 99.5 7E-12 1.5E-16 116.6 22.7 269 30-347 164-447 (450)
261 PLN02624 ornithine-delta-amino 99.5 3.3E-11 7.2E-16 119.1 29.1 227 66-355 210-449 (474)
262 PLN02397 aspartate transaminas 99.5 4.8E-12 1E-16 123.6 22.2 255 30-349 142-420 (423)
263 PRK06434 cystathionine gamma-l 99.5 1.7E-12 3.7E-17 124.3 18.7 226 44-349 121-383 (384)
264 COG0112 GlyA Glycine/serine hy 99.5 1.3E-12 2.8E-17 120.5 16.6 256 36-351 121-391 (413)
265 PRK05964 adenosylmethionine--8 99.5 1.1E-11 2.5E-16 120.9 24.3 225 67-351 186-423 (423)
266 PRK01278 argD acetylornithine 99.5 1.2E-11 2.7E-16 119.5 24.4 218 65-350 163-388 (389)
267 PRK05093 argD bifunctional N-s 99.5 2.9E-11 6.2E-16 117.5 26.4 269 2-351 112-401 (403)
268 cd01494 AAT_I Aspartate aminot 99.5 1.9E-13 4.2E-18 115.5 9.8 127 30-165 41-170 (170)
269 PRK07392 threonine-phosphate d 99.5 1.9E-11 4.2E-16 116.9 24.3 247 32-349 99-358 (360)
270 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.4E-11 3.1E-16 118.1 22.6 267 36-351 114-427 (450)
271 PRK03967 histidinol-phosphate 99.5 1.6E-11 3.4E-16 116.4 22.6 238 31-350 95-334 (337)
272 TIGR00707 argD acetylornithine 99.4 1.7E-11 3.7E-16 118.0 22.4 213 66-347 159-378 (379)
273 PRK08637 hypothetical protein; 99.4 2.4E-11 5.2E-16 117.4 23.5 266 30-351 93-387 (388)
274 TIGR00474 selA seryl-tRNA(sec) 99.4 7.9E-12 1.7E-16 121.9 20.1 126 29-166 159-302 (454)
275 PRK07590 L,L-diaminopimelate a 99.4 7.1E-12 1.5E-16 122.0 19.5 259 31-347 123-408 (409)
276 TIGR03542 DAPAT_plant LL-diami 99.4 1.7E-11 3.7E-16 119.0 21.1 256 31-347 119-401 (402)
277 PRK13237 tyrosine phenol-lyase 99.4 2.7E-11 6E-16 116.4 22.0 267 36-351 121-434 (460)
278 PRK14809 histidinol-phosphate 99.4 5.8E-11 1.2E-15 113.5 24.3 243 32-349 108-356 (357)
279 PRK08354 putative aminotransfe 99.4 2.4E-11 5.1E-16 113.9 21.0 116 30-164 77-196 (311)
280 PRK05664 threonine-phosphate d 99.4 3.1E-11 6.8E-16 114.0 22.0 238 31-350 87-328 (330)
281 KOG0256|consensus 99.4 2.4E-11 5.2E-16 112.2 20.0 266 39-355 179-466 (471)
282 PRK05839 hypothetical protein; 99.4 1.9E-11 4.2E-16 117.5 20.6 246 29-349 108-373 (374)
283 PRK09257 aromatic amino acid a 99.4 2E-11 4.3E-16 118.3 20.8 132 30-164 120-260 (396)
284 PRK12381 bifunctional succinyl 99.4 1.1E-10 2.4E-15 113.5 25.5 273 2-355 111-404 (406)
285 TIGR03801 asp_4_decarbox aspar 99.4 1.3E-11 2.8E-16 122.0 19.0 128 31-167 185-327 (521)
286 COG1167 ARO8 Transcriptional r 99.4 1E-10 2.3E-15 115.0 25.1 265 29-352 178-457 (459)
287 PRK07865 N-succinyldiaminopime 99.4 1.4E-11 3.1E-16 117.9 18.5 242 30-345 111-363 (364)
288 PRK06959 putative threonine-ph 99.4 4.6E-11 9.9E-16 113.3 21.7 235 33-352 96-335 (339)
289 PRK09275 aspartate aminotransf 99.4 2.3E-11 4.9E-16 120.4 20.0 128 31-167 191-328 (527)
290 PRK09440 avtA valine--pyruvate 99.4 3.4E-11 7.3E-16 117.5 20.8 258 31-352 128-413 (416)
291 PRK14808 histidinol-phosphate 99.4 9.3E-11 2E-15 111.0 23.0 236 32-347 98-334 (335)
292 PRK02936 argD acetylornithine 99.4 1.4E-10 3.1E-15 111.5 24.7 213 66-347 156-376 (377)
293 PF01212 Beta_elim_lyase: Beta 99.4 6.7E-13 1.5E-17 122.2 8.1 139 29-172 67-214 (290)
294 COG0626 MetC Cystathionine bet 99.4 7.6E-11 1.7E-15 111.8 21.3 248 29-351 102-395 (396)
295 PRK02627 acetylornithine amino 99.4 2.8E-10 6E-15 110.2 25.5 217 66-351 171-395 (396)
296 TIGR03539 DapC_actino succinyl 99.4 4E-11 8.7E-16 114.5 19.3 239 30-344 105-356 (357)
297 PRK09264 diaminobutyrate--2-ox 99.4 6.9E-10 1.5E-14 108.4 27.5 233 66-357 181-423 (425)
298 PRK03715 argD acetylornithine 99.4 2.7E-10 5.9E-15 110.1 24.0 270 2-351 108-394 (395)
299 PRK11522 putrescine--2-oxoglut 99.4 4.8E-10 1E-14 110.1 25.8 233 66-354 214-455 (459)
300 PLN02368 alanine transaminase 99.3 1.1E-10 2.4E-15 113.1 20.4 135 30-164 155-306 (407)
301 COG4992 ArgD Ornithine/acetylo 99.3 3E-10 6.6E-15 106.3 22.1 230 53-353 165-401 (404)
302 PRK04260 acetylornithine amino 99.3 1E-09 2.2E-14 105.6 25.1 247 30-347 111-374 (375)
303 KOG0053|consensus 99.3 1.9E-10 4E-15 108.0 19.1 229 48-351 138-407 (409)
304 PRK07049 methionine gamma-lyas 99.3 5.1E-10 1.1E-14 109.1 23.0 248 32-349 124-425 (427)
305 TIGR02407 ectoine_ectB diamino 99.3 1.4E-09 3.1E-14 105.8 25.4 225 66-350 177-412 (412)
306 PRK04612 argD acetylornithine 99.3 1.6E-09 3.5E-14 105.1 25.3 223 66-353 175-406 (408)
307 KOG0257|consensus 99.3 1.3E-10 2.7E-15 108.2 16.0 130 28-164 116-259 (420)
308 PRK12566 glycine dehydrogenase 99.3 6E-10 1.3E-14 115.1 22.4 258 30-345 168-439 (954)
309 COG1982 LdcC Arginine/lysine/o 99.3 4.4E-10 9.6E-15 109.6 19.8 263 29-345 109-403 (557)
310 PRK06541 hypothetical protein; 99.3 4.8E-09 1E-13 103.2 27.2 229 68-352 208-457 (460)
311 TIGR03372 putres_am_tran putre 99.3 7.3E-09 1.6E-13 101.2 28.2 226 66-347 207-441 (442)
312 PRK08117 4-aminobutyrate amino 99.3 4.6E-09 9.9E-14 103.0 26.8 229 66-352 191-431 (433)
313 PLN02760 4-aminobutyrate:pyruv 99.2 4.3E-09 9.3E-14 104.5 25.8 286 2-352 166-493 (504)
314 COG0160 GabT 4-aminobutyrate a 99.2 5.9E-09 1.3E-13 100.3 24.8 227 67-351 206-446 (447)
315 PRK08360 4-aminobutyrate amino 99.2 2.3E-08 5E-13 98.1 28.1 228 67-354 189-430 (443)
316 PRK05769 4-aminobutyrate amino 99.2 1.4E-08 3.1E-13 99.5 26.4 207 84-351 222-440 (441)
317 PRK06058 4-aminobutyrate amino 99.2 2.1E-08 4.6E-13 98.5 25.5 209 85-350 221-442 (443)
318 PRK09221 beta alanine--pyruvat 99.1 4.6E-08 1E-12 96.0 26.9 230 67-351 204-444 (445)
319 TIGR00709 dat 2,4-diaminobutyr 99.1 2.6E-08 5.5E-13 97.8 25.1 213 84-354 207-439 (442)
320 PRK08593 4-aminobutyrate amino 99.1 5E-08 1.1E-12 95.8 27.0 211 84-353 208-432 (445)
321 PRK00062 glutamate-1-semialdeh 99.1 1.6E-08 3.6E-13 98.8 23.3 223 66-351 183-425 (426)
322 PRK07678 aminotransferase; Val 99.1 9.1E-08 2E-12 94.1 28.3 230 70-351 202-450 (451)
323 TIGR00713 hemL glutamate-1-sem 99.1 2.3E-08 4.9E-13 97.8 24.0 225 66-350 181-422 (423)
324 PLN00144 acetylornithine trans 99.1 6.6E-08 1.4E-12 93.2 26.2 218 66-351 155-381 (382)
325 TIGR02617 tnaA_trp_ase tryptop 99.1 6.5E-09 1.4E-13 99.2 18.6 265 37-351 128-442 (467)
326 PRK12389 glutamate-1-semialdeh 99.1 5.3E-08 1.2E-12 95.2 25.1 220 66-350 186-427 (428)
327 PRK06062 hypothetical protein; 99.1 2.5E-07 5.5E-12 90.9 29.9 224 67-352 200-447 (451)
328 PRK06938 diaminobutyrate--2-ox 99.1 8.2E-08 1.8E-12 94.6 26.1 229 66-352 214-462 (464)
329 TIGR00700 GABAtrnsam 4-aminobu 99.1 2.5E-07 5.4E-12 90.4 29.1 224 67-349 182-419 (420)
330 PRK06173 adenosylmethionine--8 99.1 9.7E-08 2.1E-12 93.3 25.3 226 66-352 192-427 (429)
331 PRK06105 aminotransferase; Pro 99.1 1.2E-07 2.7E-12 93.4 26.2 232 67-353 204-452 (460)
332 TIGR00508 bioA adenosylmethion 99.1 5.5E-08 1.2E-12 95.0 23.3 224 66-350 193-426 (427)
333 KOG1358|consensus 99.0 1E-08 2.2E-13 94.5 16.6 264 31-351 179-466 (467)
334 PRK05639 4-aminobutyrate amino 99.0 1.8E-07 4E-12 92.0 26.6 211 84-352 223-445 (457)
335 PRK06082 4-aminobutyrate amino 99.0 1.3E-07 2.7E-12 93.3 25.5 227 68-357 218-458 (459)
336 KOG0630|consensus 99.0 3.3E-09 7.1E-14 100.1 12.9 201 29-279 230-440 (838)
337 PRK13360 omega amino acid--pyr 99.0 7.3E-08 1.6E-12 94.5 22.9 230 67-351 201-441 (442)
338 PRK12403 putative aminotransfe 99.0 4.1E-07 8.8E-12 89.7 28.2 228 68-354 209-456 (460)
339 PRK06777 4-aminobutyrate amino 99.0 2.6E-07 5.7E-12 90.2 26.7 225 66-349 182-420 (421)
340 KOG0634|consensus 99.0 4.7E-07 1E-11 84.8 26.1 270 30-351 148-467 (472)
341 PRK07481 hypothetical protein; 99.0 3.8E-07 8.2E-12 89.7 27.0 215 84-351 214-446 (449)
342 PRK07986 adenosylmethionine--8 99.0 8.2E-08 1.8E-12 93.7 22.1 225 66-350 190-423 (428)
343 PRK07030 adenosylmethionine--8 99.0 4.1E-07 9E-12 89.7 27.2 230 67-352 201-448 (466)
344 PRK09792 4-aminobutyrate trans 99.0 2.8E-07 6.2E-12 89.9 25.7 225 67-349 183-420 (421)
345 PRK08088 4-aminobutyrate amino 99.0 8.7E-08 1.9E-12 93.7 21.7 226 67-351 184-424 (425)
346 PRK07495 4-aminobutyrate amino 99.0 1.2E-06 2.5E-11 85.6 29.5 226 67-352 183-423 (425)
347 KOG3843|consensus 99.0 1.2E-09 2.6E-14 95.7 7.4 276 32-363 105-415 (432)
348 PRK07483 hypothetical protein; 99.0 5.9E-07 1.3E-11 88.2 27.1 231 68-352 186-439 (443)
349 PRK07036 hypothetical protein; 99.0 6.3E-07 1.4E-11 88.5 27.4 226 68-352 207-454 (466)
350 PRK06149 hypothetical protein; 99.0 2.9E-07 6.3E-12 98.6 25.8 227 68-350 729-970 (972)
351 PRK05630 adenosylmethionine--8 98.9 4.6E-07 9.9E-12 88.4 24.9 193 100-350 222-420 (422)
352 PRK05965 hypothetical protein; 98.9 1E-06 2.3E-11 86.8 27.3 232 68-353 202-450 (459)
353 PLN02482 glutamate-1-semialdeh 98.9 2E-07 4.2E-12 92.0 22.1 223 66-350 232-473 (474)
354 PRK06931 diaminobutyrate--2-ox 98.9 6E-07 1.3E-11 88.5 25.4 212 84-353 226-457 (459)
355 PRK06943 adenosylmethionine--8 98.9 8.3E-07 1.8E-11 87.3 26.2 227 67-352 208-448 (453)
356 COG3977 Alanine-alpha-ketoisov 98.9 1.1E-07 2.4E-12 85.0 17.3 226 63-352 167-413 (417)
357 PRK00615 glutamate-1-semialdeh 98.9 2.8E-07 6E-12 90.1 22.0 225 66-352 187-430 (433)
358 KOG2467|consensus 98.9 8.7E-08 1.9E-12 87.8 16.8 243 61-349 172-425 (477)
359 PRK08742 adenosylmethionine--8 98.9 1.5E-06 3.2E-11 85.9 27.0 229 67-352 223-469 (472)
360 PRK06148 hypothetical protein; 98.9 4.3E-07 9.4E-12 97.5 24.8 228 68-351 769-1011(1013)
361 PRK08297 L-lysine aminotransfe 98.9 2.5E-07 5.4E-12 90.8 21.1 221 67-351 212-442 (443)
362 TIGR03251 LAT_fam L-lysine 6-t 98.9 3E-07 6.4E-12 90.1 21.5 217 67-346 205-430 (431)
363 PRK07482 hypothetical protein; 98.9 1.7E-06 3.8E-11 85.3 26.9 234 66-352 205-456 (461)
364 PRK06916 adenosylmethionine--8 98.9 1.3E-06 2.8E-11 86.2 25.8 231 66-352 209-457 (460)
365 PRK06917 hypothetical protein; 98.9 2E-06 4.4E-11 84.5 26.8 233 67-353 185-440 (447)
366 PRK07480 putative aminotransfe 98.9 1.3E-06 2.8E-11 86.0 25.4 228 68-353 206-451 (456)
367 PRK04013 argD acetylornithine/ 98.9 9.8E-07 2.1E-11 84.3 23.5 206 66-351 151-361 (364)
368 COG3033 TnaA Tryptophanase [Am 98.9 3E-07 6.4E-12 84.2 18.1 274 30-351 125-445 (471)
369 TIGR00699 GABAtrns_euk 4-amino 98.8 5.9E-07 1.3E-11 88.2 21.0 216 66-347 237-463 (464)
370 COG1448 TyrB Aspartate/tyrosin 98.8 2.5E-07 5.4E-12 85.7 16.7 264 28-347 118-395 (396)
371 PRK06918 4-aminobutyrate amino 98.8 7.5E-06 1.6E-10 80.8 28.0 210 85-352 221-445 (451)
372 KOG0633|consensus 98.8 2.5E-07 5.4E-12 81.2 15.1 253 30-347 111-374 (375)
373 COG0161 BioA Adenosylmethionin 98.8 2.2E-06 4.9E-11 82.3 22.7 284 2-354 120-447 (449)
374 COG0001 HemL Glutamate-1-semia 98.8 7.7E-07 1.7E-11 84.5 18.6 235 54-353 179-431 (432)
375 KOG1402|consensus 98.8 2.4E-06 5.3E-11 77.4 20.7 222 54-348 188-425 (427)
376 COG1921 SelA Selenocysteine sy 98.6 4.5E-07 9.6E-12 85.2 11.8 120 38-171 119-241 (395)
377 PRK06209 glutamate-1-semialdeh 98.6 8.3E-06 1.8E-10 79.9 20.4 93 66-165 173-265 (431)
378 PRK07046 aminotransferase; Val 98.5 2.1E-05 4.5E-10 77.5 21.4 225 66-352 206-452 (453)
379 COG1932 SerC Phosphoserine ami 98.5 8.4E-06 1.8E-10 75.4 15.9 208 86-350 147-363 (365)
380 KOG1404|consensus 98.4 3.1E-05 6.8E-10 72.0 18.4 205 84-344 213-432 (442)
381 KOG0258|consensus 98.4 0.00011 2.4E-09 68.3 20.8 78 47-125 178-260 (475)
382 PF12897 Aminotran_MocR: Alani 98.3 0.00022 4.7E-09 66.8 21.3 276 7-349 105-414 (425)
383 PLN02974 adenosylmethionine-8- 98.3 0.00012 2.7E-09 76.4 21.4 226 68-348 567-816 (817)
384 PF03841 SelA: L-seryl-tRNA se 98.1 3.4E-06 7.3E-11 78.7 4.7 131 30-171 85-231 (367)
385 PF00202 Aminotran_3: Aminotra 98.0 0.00059 1.3E-08 64.7 19.0 80 85-167 179-262 (339)
386 KOG1401|consensus 98.0 0.0032 6.9E-08 59.3 21.5 150 2-167 131-291 (433)
387 KOG1412|consensus 97.8 0.0015 3.2E-08 59.3 16.5 266 29-352 124-407 (410)
388 KOG2040|consensus 97.8 0.00019 4.2E-09 70.7 11.3 249 30-345 205-478 (1001)
389 KOG1405|consensus 97.7 0.004 8.8E-08 57.5 16.6 220 66-350 254-483 (484)
390 KOG2790|consensus 97.6 0.0038 8.3E-08 56.0 15.4 258 32-350 102-368 (370)
391 PF06838 Met_gamma_lyase: Meth 97.6 0.00056 1.2E-08 63.7 9.8 132 29-172 96-244 (403)
392 COG4100 Cystathionine beta-lya 95.7 0.046 1E-06 49.7 7.7 114 30-155 108-237 (416)
393 KOG1411|consensus 95.5 0.18 3.8E-06 46.9 10.7 258 29-349 145-424 (427)
394 KOG1403|consensus 95.2 0.42 9.1E-06 43.6 12.0 237 67-358 193-445 (452)
395 PF04864 Alliinase_C: Allinase 93.6 0.84 1.8E-05 42.7 10.5 79 84-173 138-217 (363)
396 COG2870 RfaE ADP-heptose synth 77.6 6.9 0.00015 37.5 6.3 64 52-120 114-178 (467)
397 COG0386 BtuE Glutathione perox 74.2 22 0.00048 29.4 7.6 97 50-154 24-133 (162)
398 cd01455 vWA_F11C1-5a_type Von 72.6 12 0.00026 32.2 6.2 53 68-120 95-149 (191)
399 PRK13397 3-deoxy-7-phosphohept 68.4 23 0.00049 32.0 7.2 61 64-126 132-197 (250)
400 PF02310 B12-binding: B12 bind 66.8 23 0.0005 27.4 6.4 68 45-123 22-91 (121)
401 smart00642 Aamy Alpha-amylase 66.7 12 0.00026 31.4 4.9 29 93-121 63-91 (166)
402 TIGR01361 DAHP_synth_Bsub phos 65.4 56 0.0012 29.7 9.3 61 65-125 143-206 (260)
403 PRK13396 3-deoxy-7-phosphohept 65.1 28 0.0006 33.1 7.4 65 62-126 216-284 (352)
404 PRK12595 bifunctional 3-deoxy- 64.7 79 0.0017 30.2 10.6 63 62-125 232-299 (360)
405 TIGR02026 BchE magnesium-proto 61.1 38 0.00083 33.9 8.1 69 47-124 32-103 (497)
406 PF05368 NmrA: NmrA-like famil 59.3 23 0.00049 31.1 5.6 76 30-118 24-99 (233)
407 PRK12457 2-dehydro-3-deoxyphos 58.7 93 0.002 28.5 9.3 65 58-123 134-201 (281)
408 COG0296 GlgB 1,4-alpha-glucan 55.9 8.3 0.00018 39.5 2.4 36 88-123 202-237 (628)
409 COG1105 FruK Fructose-1-phosph 55.7 36 0.00078 31.7 6.3 61 62-123 108-169 (310)
410 PRK13398 3-deoxy-7-phosphohept 55.6 80 0.0017 28.8 8.5 62 64-125 144-208 (266)
411 cd02067 B12-binding B12 bindin 55.3 93 0.002 24.0 8.0 65 47-122 23-90 (119)
412 COG0329 DapA Dihydrodipicolina 55.1 16 0.00036 33.9 4.1 62 58-119 15-79 (299)
413 PRK08057 cobalt-precorrin-6x r 53.7 22 0.00047 32.1 4.5 28 97-124 49-76 (248)
414 PF00128 Alpha-amylase: Alpha 53.6 7.9 0.00017 35.4 1.7 31 92-122 44-74 (316)
415 TIGR00288 conserved hypothetic 51.8 46 0.001 27.8 5.8 20 101-120 117-136 (160)
416 PRK00685 metal-dependent hydro 51.5 1.6E+02 0.0034 25.6 9.7 77 31-112 136-213 (228)
417 cd00951 KDGDH 5-dehydro-4-deox 50.7 28 0.00062 32.1 4.9 52 59-110 12-63 (289)
418 PRK09441 cytoplasmic alpha-amy 47.7 13 0.00028 37.1 2.3 30 92-121 73-102 (479)
419 TIGR00381 cdhD CO dehydrogenas 46.1 1.8E+02 0.0038 28.1 9.4 82 28-120 153-247 (389)
420 PF02603 Hpr_kinase_N: HPr Ser 45.5 28 0.0006 27.8 3.5 79 33-119 27-111 (127)
421 cd00950 DHDPS Dihydrodipicolin 44.7 40 0.00086 30.9 4.9 54 58-111 11-64 (284)
422 PRK11633 cell division protein 44.0 1.1E+02 0.0023 27.3 7.2 53 294-347 160-213 (226)
423 PF02571 CbiJ: Precorrin-6x re 43.9 22 0.00047 32.1 2.9 29 96-124 49-77 (249)
424 cd00408 DHDPS-like Dihydrodipi 43.6 45 0.00097 30.4 5.1 63 57-119 7-72 (281)
425 PF05913 DUF871: Bacterial pro 42.6 34 0.00073 32.7 4.1 59 66-124 12-71 (357)
426 TIGR00674 dapA dihydrodipicoli 42.2 51 0.0011 30.2 5.2 54 58-111 9-62 (285)
427 TIGR00683 nanA N-acetylneurami 41.8 48 0.001 30.6 4.9 62 58-119 11-76 (290)
428 TIGR03249 KdgD 5-dehydro-4-deo 41.5 37 0.00079 31.4 4.2 53 58-110 16-68 (296)
429 COG2099 CobK Precorrin-6x redu 41.2 44 0.00095 30.1 4.3 28 97-124 50-77 (257)
430 PRK03170 dihydrodipicolinate s 40.7 50 0.0011 30.4 4.9 53 58-110 12-64 (292)
431 COG1954 GlpP Glycerol-3-phosph 40.1 36 0.00078 28.7 3.4 48 66-124 12-61 (181)
432 PF00448 SRP54: SRP54-type pro 39.5 2E+02 0.0044 24.7 8.2 90 30-124 31-127 (196)
433 TIGR01362 KDO8P_synth 3-deoxy- 39.2 1.8E+02 0.0038 26.4 7.8 63 58-123 120-185 (258)
434 TIGR02402 trehalose_TreZ malto 39.2 21 0.00045 36.3 2.3 31 92-122 152-182 (542)
435 PRK10638 glutaredoxin 3; Provi 38.9 1.4E+02 0.0031 21.3 7.0 68 30-105 3-72 (83)
436 cd00886 MogA_MoaB MogA_MoaB fa 38.8 1.6E+02 0.0035 24.1 7.2 66 37-107 19-84 (152)
437 PLN03244 alpha-amylase; Provis 38.8 22 0.00048 37.4 2.4 33 90-122 431-463 (872)
438 PF00701 DHDPS: Dihydrodipicol 38.3 46 0.00099 30.6 4.3 61 58-118 12-75 (289)
439 COG1504 Uncharacterized conser 37.9 66 0.0014 25.0 4.2 49 63-119 47-95 (121)
440 TIGR03586 PseI pseudaminic aci 37.4 3.3E+02 0.0071 25.7 9.8 60 64-125 143-204 (327)
441 PRK04147 N-acetylneuraminate l 36.9 47 0.001 30.6 4.1 61 58-118 14-78 (293)
442 PRK12313 glycogen branching en 36.3 25 0.00054 36.4 2.4 29 94-122 214-242 (633)
443 PRK05234 mgsA methylglyoxal sy 36.2 1.9E+02 0.0042 23.5 7.2 78 31-121 33-114 (142)
444 PF10087 DUF2325: Uncharacteri 36.1 1.4E+02 0.003 22.3 5.9 68 41-120 13-82 (97)
445 CHL00073 chlN photochlorophyll 35.4 77 0.0017 31.4 5.4 55 66-122 81-137 (457)
446 TIGR02313 HpaI-NOT-DapA 2,4-di 35.4 56 0.0012 30.2 4.3 61 58-118 11-74 (294)
447 smart00481 POLIIIAc DNA polyme 35.3 1.4E+02 0.003 20.3 5.4 47 62-117 12-58 (67)
448 COG0426 FpaA Uncharacterized f 35.2 4.3E+02 0.0092 25.6 10.9 98 31-138 248-355 (388)
449 COG0108 RibB 3,4-dihydroxy-2-b 35.1 90 0.0019 27.1 5.1 47 71-118 144-190 (203)
450 PF00926 DHBP_synthase: 3,4-di 35.1 81 0.0018 27.3 4.9 47 70-117 139-185 (194)
451 PRK03620 5-dehydro-4-deoxygluc 34.8 55 0.0012 30.4 4.2 61 58-118 18-81 (303)
452 PLN02417 dihydrodipicolinate s 34.7 55 0.0012 30.0 4.1 62 58-119 12-76 (280)
453 PF09419 PGP_phosphatase: Mito 34.7 1.9E+02 0.0042 24.3 7.0 87 30-119 18-112 (168)
454 PRK05402 glycogen branching en 34.6 27 0.00058 36.9 2.3 30 93-122 308-337 (726)
455 TIGR02108 PQQ_syn_pqqB coenzym 34.6 2.5E+02 0.0055 26.0 8.6 89 30-120 191-297 (302)
456 PF06506 PrpR_N: Propionate ca 34.5 2.3E+02 0.0049 23.8 7.6 48 29-81 78-125 (176)
457 PRK08673 3-deoxy-7-phosphohept 33.7 3.5E+02 0.0077 25.6 9.4 63 64-126 210-275 (335)
458 PF03599 CdhD: CO dehydrogenas 33.4 2.5E+02 0.0054 27.1 8.3 79 27-121 68-152 (386)
459 PLN03033 2-dehydro-3-deoxyphos 33.2 2E+02 0.0044 26.5 7.2 64 57-123 133-199 (290)
460 TIGR01515 branching_enzym alph 32.6 30 0.00065 35.7 2.2 29 94-122 200-228 (613)
461 PF01972 SDH_sah: Serine dehyd 32.2 1.7E+02 0.0037 26.8 6.6 117 4-154 32-152 (285)
462 COG2121 Uncharacterized protei 31.5 1.7E+02 0.0037 25.5 6.2 82 30-119 69-152 (214)
463 PF00793 DAHP_synth_1: DAHP sy 31.0 48 0.0011 30.3 3.1 72 53-126 132-207 (270)
464 PF02662 FlpD: Methyl-viologen 30.7 2.3E+02 0.0049 22.5 6.6 47 31-79 2-54 (124)
465 PF03652 UPF0081: Uncharacteri 30.6 1.8E+02 0.0039 23.4 6.1 59 61-124 34-99 (135)
466 TIGR00250 RNAse_H_YqgF RNAse H 30.4 1.1E+02 0.0024 24.4 4.8 56 64-124 34-95 (130)
467 PRK04452 acetyl-CoA decarbonyl 30.2 2.2E+02 0.0048 26.7 7.3 47 63-119 135-181 (319)
468 cd01422 MGS Methylglyoxal synt 30.1 2.6E+02 0.0057 21.7 7.0 77 30-118 27-106 (115)
469 cd00954 NAL N-Acetylneuraminic 30.0 75 0.0016 29.2 4.2 61 58-118 11-75 (288)
470 PF13407 Peripla_BP_4: Peripla 29.7 1.4E+02 0.003 26.2 5.9 63 45-118 22-85 (257)
471 PLN00196 alpha-amylase; Provis 29.4 34 0.00075 33.5 1.9 28 94-121 86-113 (428)
472 PRK13505 formate--tetrahydrofo 29.1 2.2E+02 0.0048 28.9 7.4 85 26-123 320-411 (557)
473 PRK10785 maltodextrin glucosid 29.0 36 0.00078 35.0 2.1 27 95-121 221-247 (598)
474 COG0648 Nfo Endonuclease IV [D 28.9 2.4E+02 0.0052 26.0 7.1 76 47-123 96-179 (280)
475 TIGR02189 GlrX-like_plant Glut 28.3 2.6E+02 0.0056 21.0 7.2 71 30-105 9-81 (99)
476 TIGR00506 ribB 3,4-dihydroxy-2 28.3 1.4E+02 0.0031 25.9 5.4 47 70-117 144-190 (199)
477 cd02070 corrinoid_protein_B12- 27.8 3.6E+02 0.0078 23.2 7.9 82 29-121 83-173 (201)
478 COG3870 Uncharacterized protei 27.6 2.1E+02 0.0046 21.8 5.3 56 294-351 10-67 (109)
479 COG1419 FlhF Flagellar GTP-bin 27.6 4.1E+02 0.009 25.9 8.7 84 28-121 233-322 (407)
480 PRK10933 trehalose-6-phosphate 27.4 42 0.00091 34.1 2.2 30 92-121 73-102 (551)
481 PLN02447 1,4-alpha-glucan-bran 27.3 44 0.00095 35.3 2.3 30 93-122 293-322 (758)
482 COG2185 Sbm Methylmalonyl-CoA 27.2 1.1E+02 0.0025 24.9 4.3 57 46-114 35-92 (143)
483 cd00758 MoCF_BD MoCF_BD: molyb 27.0 3.2E+02 0.0069 21.6 7.1 63 37-106 18-80 (133)
484 TIGR00177 molyb_syn molybdenum 27.0 2.9E+02 0.0064 22.2 6.9 64 37-107 26-89 (144)
485 PF00403 HMA: Heavy-metal-asso 26.9 1.9E+02 0.0042 19.1 5.0 51 258-308 9-60 (62)
486 KOG3974|consensus 26.8 57 0.0012 29.6 2.6 24 97-120 116-139 (306)
487 PRK09505 malS alpha-amylase; R 26.7 44 0.00095 34.9 2.3 27 95-121 287-313 (683)
488 PRK10076 pyruvate formate lyas 26.4 1.4E+02 0.0031 26.1 5.1 57 64-121 18-75 (213)
489 cd00952 CHBPH_aldolase Trans-o 26.2 1.2E+02 0.0025 28.3 4.8 58 62-119 23-83 (309)
490 PLN02361 alpha-amylase 26.1 46 0.00099 32.4 2.1 29 93-121 69-97 (401)
491 PF03162 Y_phosphatase2: Tyros 25.4 1.5E+02 0.0032 24.8 4.9 70 30-99 34-108 (164)
492 PF00456 Transketolase_N: Tran 25.3 1.9E+02 0.004 27.4 6.0 39 47-90 202-241 (332)
493 PRK00945 acetyl-CoA decarbonyl 25.2 2.1E+02 0.0046 24.2 5.7 52 63-121 20-71 (171)
494 COG1091 RfbD dTDP-4-dehydrorha 24.6 5.3E+02 0.012 23.7 8.6 80 32-116 3-95 (281)
495 PF13783 DUF4177: Domain of un 24.5 1.5E+02 0.0033 20.0 4.0 33 53-85 5-37 (61)
496 PRK14706 glycogen branching en 24.5 51 0.0011 34.2 2.3 30 93-122 210-239 (639)
497 cd00953 KDG_aldolase KDG (2-ke 24.5 1.2E+02 0.0025 27.8 4.4 53 58-111 11-63 (279)
498 cd02065 B12-binding_like B12 b 24.3 3.2E+02 0.007 20.8 7.7 67 47-124 23-91 (125)
499 TIGR02403 trehalose_treC alpha 24.2 50 0.0011 33.5 2.1 29 93-121 68-96 (543)
500 COG0816 Predicted endonuclease 23.9 1.9E+02 0.0041 23.6 5.0 54 65-123 40-99 (141)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=2.6e-51 Score=402.96 Aligned_cols=318 Identities=41% Similarity=0.724 Sum_probs=284.1
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc---ceEEEecC--CCCCcCHHHHHHHHH
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSD--DNGVLRGDALLTAVK 75 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~--~~~~~d~~~L~~~l~ 75 (367)
|+||++||++++++.+.. ..++++||+|+.+|+|+.+++++.|+ .++.|+++ ++++||+++|+++|+
T Consensus 208 l~al~aAR~~~~~~~g~~--------~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~ 279 (539)
T PLN02590 208 LVVVLAARDRILKKVGKT--------LLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAIS 279 (539)
T ss_pred HHHHHHHHHHHHhhhccc--------CCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 579999999988653211 14689999999999999999999988 58999997 468999999999999
Q ss_pred HHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc
Q psy3048 76 EDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 76 ~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
++.++|..|.+|+.+.|+|.+|.+|||++|+++|++||+|+|||||+|+..+++++++..+.|++++|++++++|||++.
T Consensus 280 ~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~ 359 (539)
T PLN02590 280 HDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFA 359 (539)
T ss_pred HHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCc
Confidence 99999999999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccccc
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFR 235 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
|++||+++++++..+...+...+.|+...... .+...++ .+|+++++++++
T Consensus 360 p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~-~~~~~d~----------------------------~d~~i~lsRr~r 410 (539)
T PLN02590 360 NQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK-KDTVVNY----------------------------KDWQISLSRRFR 410 (539)
T ss_pred CcCEEEEEecCHHHHHHHhhcCHHHhCCcccc-cccCCCc----------------------------cccCCCCCCchH
Confidence 99999999999877777778888998553220 0112344 778999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-------chHHHHHHHHHhccC
Q psy3048 236 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-------NDLTNQLYERLMSHK 308 (367)
Q Consensus 236 ~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g 308 (367)
++++|.+|+.+|.+|+++++++..++++|+.+.|++.++|+++.+|.+++|+|++.+. +..+.++.++|.+.|
T Consensus 411 aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G 490 (539)
T PLN02590 411 SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTG 490 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999998652 345678999999999
Q ss_pred cEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 309 QIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 309 ~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
.+++.++.+.|+.+||++++++.++++||+.+++.|.+...++.++.
T Consensus 491 ~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~~ 537 (539)
T PLN02590 491 KIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRND 537 (539)
T ss_pred CEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999988876654
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.6e-49 Score=388.62 Aligned_cols=316 Identities=44% Similarity=0.759 Sum_probs=279.4
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcc---eEEEecCC--CCCcCHHHHHHHHH
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVP---VRQLRSDD--NGVLRGDALLTAVK 75 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~---v~~v~~~~--~~~~d~~~L~~~l~ 75 (367)
|+||++||++++++.+..+ .++++||+|+.+|+|+.+++.+.|+. ++.||++. +++||+++|+++|+
T Consensus 160 l~al~~AR~~~~~~~g~~~--------~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~ 231 (490)
T PLN02880 160 LVVLLAARDRVLRKVGKNA--------LEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAIS 231 (490)
T ss_pred HHHHHHHHHHHHHHhcccc--------cCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHH
Confidence 5799999999886643221 35799999999999999999999984 88999974 68999999999999
Q ss_pred HHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc
Q psy3048 76 EDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 76 ~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
++.++|..|.+|+.+.|+|.+|.+||+++|+++|++||+|+|||||||++.++.+.++..+.+++.+|++++++|||+++
T Consensus 232 ~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~ 311 (490)
T PLN02880 232 TDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLT 311 (490)
T ss_pred HHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCC
Confidence 99989999999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccccc
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFR 235 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
|.+||++++++...+...+...+.|+...... .....++ .+|+++++++++
T Consensus 312 P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~-~~~~~~~----------------------------~~~~i~~~rr~~ 362 (490)
T PLN02880 312 NFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ-ANSVVDY----------------------------KDWQIPLGRRFR 362 (490)
T ss_pred CccEEEEEEeCHHHHHHHHccCHHHhcCcccc-ccCCCCh----------------------------hccCcCCCCccc
Confidence 99999999998776666677788888664320 0112233 567888999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-------chHHHHHHHHHhccC
Q psy3048 236 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-------NDLTNQLYERLMSHK 308 (367)
Q Consensus 236 ~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g 308 (367)
++++|..++.+|.+|+++++++..++++++.+.|++.++++++.+|.+++++|++++. +..+.++.++|.++|
T Consensus 363 alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g 442 (490)
T PLN02880 363 SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSG 442 (490)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999998752 334567888899999
Q ss_pred cEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 309 QIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 309 ~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.+++.++.+.++.++|+++.++.++++|++.+++.|+++.+++..
T Consensus 443 ~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 443 KIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred CEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888754
No 3
>KOG0628|consensus
Probab=100.00 E-value=7.5e-47 Score=348.21 Aligned_cols=321 Identities=53% Similarity=0.940 Sum_probs=306.6
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
|.++++||..++.+.++..|...++...+++|+|||+.+|.|+.+++.+.|++++.++.+.++.|+.+.|.++|+++.++
T Consensus 153 lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~ar 232 (511)
T KOG0628|consen 153 LVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIAR 232 (511)
T ss_pred HHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhC
Confidence 46899999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
|.+|.+++.|.|+|.++.+|+|++|+.+|+++|+|+|||+||+|..+.+++++...+|++.+|++.+++|||+..-..|+
T Consensus 233 GlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs 312 (511)
T KOG0628|consen 233 GLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCS 312 (511)
T ss_pred CCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
.+|++++..+.+.++.+|-|+.+... +..++| ++|++..+++|+++++|
T Consensus 313 ~lWvkd~~~~~~~~~vdp~yL~h~~~---~~~~Dy----------------------------rhwqipl~rRfRSLKlW 361 (511)
T KOG0628|consen 313 PLWVKDGTKLSRAFNVDPLYLKHAYQ---GSAPDY----------------------------RHWQIPLGRRFRSLKLW 361 (511)
T ss_pred cceeecCceeeeeeecChHhhcchhh---ccCCCc----------------------------cccccccccchhhHHHH
Confidence 99999988888888999999988876 457777 89999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR 320 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 320 (367)
..++.+|.+++++.++++.++++++.+.+.+.+.|++..+...++|+||+.+.+..++++.+++...|.+.+.+...+|+
T Consensus 362 fv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~gk 441 (511)
T KOG0628|consen 362 FVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEINEALLNRLNSSGRIHLVPASLHGK 441 (511)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHHHHHHHHHHhcCcEEEEEeeecce
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
-++|++++.+.++++||+...+.|.+...++.
T Consensus 442 ~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 442 FVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877643
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1e-44 Score=356.85 Aligned_cols=309 Identities=25% Similarity=0.352 Sum_probs=260.7
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccc--------cCceEEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHH
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDI--------KSRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDA 69 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~ 69 (367)
|+|||+||+++++..+.. ..+.+.++ .++.+|++|+.+|+|+.++++..|. +++.||++++++||+++
T Consensus 173 l~Al~~AR~~~~~~~~~~-~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~ 251 (522)
T TIGR03799 173 ITALWVARNRLLKADGDF-KGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDA 251 (522)
T ss_pred HHHHHHHHHHhccccccc-cccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHH
Confidence 589999999988653211 12222222 3578999999999999999999988 79999999999999999
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecc
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNA 149 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 149 (367)
|++++++..+++..|++|+.+.++|.+|.++|+++|+++|++||+|+|||+|||++.++.++++..+.+++.+|++++++
T Consensus 252 L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~ 331 (522)
T TIGR03799 252 LRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDA 331 (522)
T ss_pred HHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEECh
Confidence 99999988777888889999999999999999999999999999999999999998888888888888888999999999
Q ss_pred ccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccc
Q psy3048 150 HKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTP 229 (367)
Q Consensus 150 hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (367)
|||+++|.|||+++++++..+ +.+...+.|+..... .++ .+++++
T Consensus 332 HK~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~~------~d~----------------------------~~~~le 376 (522)
T TIGR03799 332 HKQLYVPMGAGMVLFKDPALM-SAIEHHAEYILRKGS------KDL----------------------------GSHTLE 376 (522)
T ss_pred hhcCCcCcccEEEEEeCHHHH-HHhccCcchhcCCCC------Ccc----------------------------ccceee
Confidence 999999999999999987654 344555677643211 112 345677
Q ss_pred ccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC----------------
Q psy3048 230 LSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD---------------- 293 (367)
Q Consensus 230 ~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~---------------- 293 (367)
+++++.++++|++++.+|.+|+++++++..++++|+.+.|++.|+|+++.+|.+++|+|++.+.
T Consensus 377 gsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~ 456 (522)
T TIGR03799 377 GSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREK 456 (522)
T ss_pred cCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhh
Confidence 8888889999999999999999999999999999999999999999999999999999997542
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEEC-------CeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASFQ-------GRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~~-------~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
+..+.++.+++.+.|..+++++... +..++|++++++.++++||+.+++.-.
T Consensus 457 ~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~~ 520 (522)
T TIGR03799 457 INELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDEQR 520 (522)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHHhh
Confidence 2244678888999999999877654 346899999999999999999887543
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=1e-42 Score=331.36 Aligned_cols=257 Identities=44% Similarity=0.719 Sum_probs=222.4
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
|+||++||+++.++.+..+.. + .++++||+|+.+|||+.+++.+.|+.++.|+++++++||+++|++++++..++
T Consensus 117 l~al~aAR~~~~~~~~~~~~~--~---~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~ 191 (373)
T PF00282_consen 117 LYALLAARERALPRSKAKGVE--E---IPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--H---CSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhhhhcccc--c---ccccccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccc
Confidence 579999999999887666532 1 46899999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
|..|.+|+.+.|+|.+|.+||+++|+++|++|++|+|||+|+|+..++.+.++....+++++|++++++|||+++|++||
T Consensus 192 g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~ 271 (373)
T PF00282_consen 192 GKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCG 271 (373)
T ss_dssp TEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-E
T ss_pred cccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccce
Confidence 99999999999999999999999999999999999999999999888888888888999999999999999999999999
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
++++|++..+...+...+.|+.....+. +...++ .+++++++|++.++++|
T Consensus 272 ~~l~r~~~~l~~~~~~~~~Yl~~~~~~~-~~~~~~----------------------------~~~tl~~SR~~~alk~w 322 (373)
T PF00282_consen 272 VLLVRDKSDLRDAFSINADYLGNDDRES-DESYDY----------------------------GDYTLQGSRRFRALKLW 322 (373)
T ss_dssp EEEESSGGGHHGGGEEEETCTT-S-SSS--GGGCE----------------------------EEGSSSSSGHHHHHHHH
T ss_pred eEEeecccchHHHhccChhhhccccccc-cccccc----------------------------ccccccccccchHHHHH
Confidence 9999998888777777788987553210 111122 56889999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEc
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLK 291 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~ 291 (367)
..++.+|.+|+++++++..++++++.++|++.++++++.+|.+++|+|+++
T Consensus 323 ~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 323 ATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999974
No 6
>KOG0629|consensus
Probab=100.00 E-value=1.8e-41 Score=309.39 Aligned_cols=316 Identities=27% Similarity=0.445 Sum_probs=269.5
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCC---cceEEEecCCCCCcCHHHHHHHHHHH
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGD---VPVRQLRSDDNGVLRGDALLTAVKED 77 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g---~~v~~v~~~~~~~~d~~~L~~~l~~~ 77 (367)
|+||.+||.+..++.+..|- .+.|..++|+|+.+|||+.+++.+.| -.++.|++++.|.|++++||++|.++
T Consensus 173 ~Ya~~~Aryk~~Pe~K~~Gm-----~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~ 247 (510)
T KOG0629|consen 173 MYAMNCARYKNFPEVKTKGM-----FALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEA 247 (510)
T ss_pred HHHHHHHHhhcCchhhhhhh-----hcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHH
Confidence 58999999999998554442 23569999999999999999999988 48999999999999999999999999
Q ss_pred hhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC
Q psy3048 78 LAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH 157 (367)
Q Consensus 78 ~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~ 157 (367)
.++|..|.+|..|.|+|..|.+|||+.|+++|++|++|+|||+|+||+.+.+..++.++.|++++|++++++||++++|.
T Consensus 248 k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gapl 327 (510)
T KOG0629|consen 248 KAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPL 327 (510)
T ss_pred HhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHH
Q psy3048 158 DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRAL 237 (367)
Q Consensus 158 g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
.|+.++++....+.+..+..+.|++..+- ++..+.+.| +-..++|++.+.+
T Consensus 328 qCsa~l~r~~gll~~Cn~~~A~YLFq~dK------------------------~YdvS~DTg-----dK~iQCGRh~D~F 378 (510)
T KOG0629|consen 328 QCSAFLTREEGLLQRCNQMSAIYLFQQDK------------------------FYDVSYDTG-----DKAIQCGRHVDVF 378 (510)
T ss_pred hhhHHHHHHHHHHHhhcccchhhhhccCc------------------------eeecccccc-----cchhhcCccccHH
Confidence 99999999888888888888999987754 122233332 3367889999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC--CCceeEEEEEcCC---------------chHHHHH
Q psy3048 238 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP--PSMGLVCFRLKGD---------------NDLTNQL 300 (367)
Q Consensus 238 ~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~---------------~~~~~~l 300 (367)
++|..++.-|.+|+++.+.++.++|+|+.++|++-++++.+.. |+...++|++.+. ..+...+
T Consensus 379 KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkI 458 (510)
T KOG0629|consen 379 KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKI 458 (510)
T ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHH
Confidence 9999999999999999999999999999999999988776553 6778888876542 1133456
Q ss_pred HHHHhccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 301 YERLMSHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 301 ~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
-.++.++|..++++.... .++++|..+.++-.+.+|+|.+++.|+.+.+.
T Consensus 459 K~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 459 KERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred HHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 667788887766543322 35699997777788899999999999988654
No 7
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.6e-38 Score=307.13 Aligned_cols=299 Identities=22% Similarity=0.279 Sum_probs=239.3
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhh
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLA 79 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~ 79 (367)
++||++||+++..+.+..+. ...+++|++|+.+|+|+.++++..|++++.|+++++ +.+|+++|++++++++
T Consensus 115 ~~al~~ar~~~~~~~~~~g~------~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t- 187 (431)
T TIGR01788 115 MLGGLAMKWRWRKRMEAAGK------PTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENT- 187 (431)
T ss_pred HHHHHHHHHHHHHHHHhcCC------CCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCC-
Confidence 36888898765543221111 113579999999999999999999999999999865 6999999999998765
Q ss_pred CCCccEEEEEecCCCcccccCChhhHHHHHhhc------CcEEEEeccccccccc--ChhhhhhhCCCCCcceeeecccc
Q psy3048 80 KGLIPCCLVATLGTTGTCAFDNLEELGPICQEY------NIWLHVDAAYAGSALL--LPEYAHLKRGLEYVDSFAFNAHK 151 (367)
Q Consensus 80 ~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~------gi~l~vD~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK 151 (367)
.+|++++++|.+|.++|+++|+++|+++ |+|+|||+||+++.++ .++.+..+. ...+|++++|+||
T Consensus 188 -----~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~~~DSis~s~HK 261 (431)
T TIGR01788 188 -----IGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LPRVKSINVSGHK 261 (431)
T ss_pred -----eEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CCCceEEEECchh
Confidence 5899999999999999999999999999 9999999999987653 334444333 4578999999999
Q ss_pred ccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccc
Q psy3048 152 WLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLS 231 (367)
Q Consensus 152 ~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (367)
|+++|+|+|+++++++..+...+...+.|+..... ++++.++
T Consensus 262 ~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~--------------------------------------~~t~~~s 303 (431)
T TIGR01788 262 YGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEP--------------------------------------TFTLNFS 303 (431)
T ss_pred ccCCCCCcEEEEEeChHHcchhheecccccCCCCC--------------------------------------CcceecC
Confidence 99999999999998875454444445566643211 1233444
Q ss_pred ccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCC---chHHHHHHHHHhc
Q psy3048 232 RRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGD---NDLTNQLYERLMS 306 (367)
Q Consensus 232 ~~~-~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~---~~~~~~l~~~L~~ 306 (367)
+++ .+++.|..++.+|.+|++++.++..++++++.++|+++++|+++.+ +.+++|+|++.+. +..+.++.++|.+
T Consensus 304 R~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~ 383 (431)
T TIGR01788 304 RPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRE 383 (431)
T ss_pred chHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHH
Confidence 543 5678999999999999999999999999999999999999999987 7899999999752 2346789999999
Q ss_pred cCcEE---EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 307 HKQIY---IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 307 ~g~~~---~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+|+.. ..|....+..++|+++ .++.+.+.++.|++.|++++.++
T Consensus 384 ~G~~~~~~~~p~~~~~~~~lR~~~-~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 384 RGWIVPAYTLPKNAEDIVVMRIVV-REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCcccCCCCCCccCCeEEEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 99753 3344567788999965 77888999999999999998765
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-37 Score=295.86 Aligned_cols=264 Identities=32% Similarity=0.438 Sum_probs=213.7
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhh
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLA 79 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~ 79 (367)
|+|+++||+++++...... ... .+.++|++|..+|+|+.+++++.|.+++.++.+. ++++|+++|++++++++.
T Consensus 133 ~lal~aar~~~~~~~~~~~--~~~---~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~ 207 (460)
T COG0076 133 LLALLAARERWRKRALAES--GKP---GGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTI 207 (460)
T ss_pred HHHHHHHHHHHHHHhhhcc--ccc---CCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhcc
Confidence 5799999999986543211 111 2345999999999999999999999999999987 799999999999999986
Q ss_pred CCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhh-hCCCCCcceeeeccccccccCCc
Q psy3048 80 KGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL-KRGLEYVDSFAFNAHKWLLTNHD 158 (367)
Q Consensus 80 ~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g 158 (367)
.| +|+.+.|+|++|.+|||++|+++|++||+|+|||+|+|++.++....... ..+++.+|++++++|||+++|+|
T Consensus 208 ~g----~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~ 283 (460)
T COG0076 208 GG----VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIG 283 (460)
T ss_pred Cc----eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCC
Confidence 43 59999999999999999999999999999999999999998866544444 46788899999999999999999
Q ss_pred ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHH
Q psy3048 159 CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRAL 237 (367)
Q Consensus 159 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (367)
||++++++++.+.+......+|+.... .+++ +..+++. ..++
T Consensus 284 ~G~il~rd~e~l~~~~~~~~~yl~~~~------~~~~-------------------------------ti~~sr~~~~~~ 326 (460)
T COG0076 284 CGVVLFRDEEALRRILIFADYYLPGGG------IPNF-------------------------------TILGSRPGRQAL 326 (460)
T ss_pred ceEEEEECHHHhhhhhhcccccCCCCC------cCce-------------------------------eEeeccchHHHH
Confidence 999999999777776666667765431 1222 2222221 2578
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcE
Q psy3048 238 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQI 310 (367)
Q Consensus 238 ~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~ 310 (367)
++|+.++.+|.+|+.++.+++.++++++.++|++.+.++++.+|..++|+|++++......+..+.+...|+.
T Consensus 327 ~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw~ 399 (460)
T COG0076 327 ALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDRRGWQ 399 (460)
T ss_pred HHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHhcCce
Confidence 9999999999999999999999999999999999977999999999999999954221133455555555543
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=8.9e-37 Score=293.16 Aligned_cols=273 Identities=19% Similarity=0.225 Sum_probs=219.2
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
|+||++||+++. +.++|+|+.+|+|+.+++++.|++++.||++++++||+++|+++|.+++.
T Consensus 166 L~Al~aARe~~~-----------------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~- 227 (470)
T PLN02263 166 LHGILVGREVFP-----------------DGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANKD- 227 (470)
T ss_pred HHHHHHHHhhcC-----------------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCC-
Confidence 579999999631 34899999999999999999999999999998999999999999987652
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhcCc-----EEEEecccccccccChhhhhhhCCCCCcceeeecccccccc
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEYNI-----WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi-----~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
.|.+|+.+.|+|++|.+|||++|+++|+++|+ |+|||||+||+.++.-+....+.....+|++++|+|||+++
T Consensus 228 --~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~ 305 (470)
T PLN02263 228 --KPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGC 305 (470)
T ss_pred --CcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCC
Confidence 48899999999999999999999999999997 99999999988764322222223334589999999999999
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF- 234 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (367)
|.+||++++++.. + ..+...+.|+...+. ++.++|++
T Consensus 306 P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d~----------------------------------------ti~gSR~g~ 343 (470)
T PLN02263 306 PMPCGVQITRMEH-I-NVLSSNVEYLASRDA----------------------------------------TIMGSRNGH 343 (470)
T ss_pred CcCEEEEEEehhh-H-hhhccChHhhCCCCC----------------------------------------CcCCCCCcH
Confidence 9999999998643 2 345566777755321 23345554
Q ss_pred cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE
Q psy3048 235 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK 314 (367)
Q Consensus 235 ~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~ 314 (367)
.++++|..|+.+|.+|++++++++.++++++.++|+++ |++++..|.+++|+|+.+. .+. ..+|+. +..
T Consensus 344 ~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~-----~~~----~~~gW~-L~~ 412 (470)
T PLN02263 344 APIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPK-----DEE----FVRRWQ-LAC 412 (470)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc-----hHH----hhcceE-Ecc
Confidence 47999999999999999999999999999999999998 7888888889999997542 111 235642 322
Q ss_pred eEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 315 ASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 315 ~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
. +..+++++ .++.+.+.+|.|++.|++..+..
T Consensus 413 ---~-~~~~Hivv-mphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 413 ---Q-GNIAHVVV-MPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ---C-CCcEEEEE-cCCCCHHHHHHHHHHHHHHHhhh
Confidence 1 23689955 67788999999999999987754
No 10
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=1.8e-35 Score=293.50 Aligned_cols=288 Identities=19% Similarity=0.252 Sum_probs=221.8
Q ss_pred EEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
++++|+..|||+.+++.+.|+ .++.||+|++++||+++|+++|++..+++..|..||.+.|+|.+|.+|||++|+++
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l 303 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL 303 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence 899999999999999999998 59999999999999999999999988888888899999999999999999999999
Q ss_pred H---hhcCc--EEEEeccccccc--ccC------------------------------hhhhhhhCCCCCcceeeecccc
Q psy3048 109 C---QEYNI--WLHVDAAYAGSA--LLL------------------------------PEYAHLKRGLEYVDSFAFNAHK 151 (367)
Q Consensus 109 ~---~~~gi--~l~vD~a~~~~~--~~~------------------------------~~~~~~~~~~~~~D~~~~~~hK 151 (367)
| +++|+ |+|||||+|+.. ++. ++....+.+++++|++++++||
T Consensus 304 ~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK 383 (608)
T TIGR03811 304 RNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK 383 (608)
T ss_pred HHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc
Confidence 9 67898 699999999863 221 2344567789999999999999
Q ss_pred ccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccc
Q psy3048 152 WLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLS 231 (367)
Q Consensus 152 ~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (367)
|++.|++||++++|++. +...+...+.|++....+ .+.. +..+...++
T Consensus 384 ~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~----~p~~---------------------------~g~~~legS 431 (608)
T TIGR03811 384 MGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGAD----IPAL---------------------------LGAYILEGS 431 (608)
T ss_pred ccccCCCeEEEEEeCHH-HHHHHhcCcchhcccccc----Cccc---------------------------ccccceecC
Confidence 99999999999999886 445567788898654321 1100 022334444
Q ss_pred cc-ccHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHhcC------CCCeEE--eCCCCceeEEEEEcCC-------
Q psy3048 232 RR-FRALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEK------DDRFEL--VCPPSMGLVCFRLKGD------- 293 (367)
Q Consensus 232 ~~-~~~~~~~~~l~~~--~~~g~~~~~~~~~~la~~l~~~L~~------~~g~~~--~~~~~~~~v~f~~~~~------- 293 (367)
+. +.++++|++++.+ |.+|+.++++++.++++++.+.|++ .+.+++ +.+|.+++|+|++.+.
T Consensus 432 R~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~ 511 (608)
T TIGR03811 432 KAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVK 511 (608)
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHH
Confidence 42 5689999999998 9999999999999999999999988 456776 6788999999998642
Q ss_pred -chHHHHHHHHHh-ccC-----cEEEEEeEE--------------------------CCeeEEEEEecCCCCCH-HHHHH
Q psy3048 294 -NDLTNQLYERLM-SHK-----QIYIIKASF--------------------------QGRPFLRFVVTSPETNQ-CDVAF 339 (367)
Q Consensus 294 -~~~~~~l~~~L~-~~g-----~~~~~~~~~--------------------------~~~~~lRi~~~~~~~~~-edid~ 339 (367)
+..++++++++. ..| .++++.+.+ ..-.++|.++++|+.++ +-++.
T Consensus 512 ~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~ 591 (608)
T TIGR03811 512 MNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDE 591 (608)
T ss_pred HHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHH
Confidence 223344555443 122 122222211 12347999888887554 77788
Q ss_pred HHHHHHHHHHHh
Q psy3048 340 AWNEISHQSSEM 351 (367)
Q Consensus 340 li~~l~~~~~~~ 351 (367)
+++.|++..++.
T Consensus 592 ~~~~~~~~~~~~ 603 (608)
T TIGR03811 592 YAPKIKAAMQEK 603 (608)
T ss_pred HHHHHHHHHHHH
Confidence 888887766553
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=1.4e-34 Score=274.28 Aligned_cols=255 Identities=21% Similarity=0.236 Sum_probs=202.9
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
+|++|..+|+|+.+++++.|.+++.||++.+|++|+++|++++++++. .|.+|++++++|.+|.++|+++|+++|++
T Consensus 113 ~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~---~~~lvv~tagtt~tG~idpi~eI~~i~~~ 189 (374)
T PLN03032 113 ILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRD---KPAILNVNIGTTVKGAVDDLDRILRILKE 189 (374)
T ss_pred EEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCC---CCEEEEEEecCcCCccCCCHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999987542 36789999999999999999999999999
Q ss_pred cC-----cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 112 YN-----IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 112 ~g-----i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|| +|+|||+|++++.++.......+.....+|++++|+|||+++|.|+|++++++.. + ..+...+.|+...
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~-- 265 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR-- 265 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC--
Confidence 96 5999999999877653211111111234799999999999999999999998643 3 2344556776442
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
++++.++|+ +.++++|+.|+.+|.+|+.++.+++.++++|+
T Consensus 266 --------------------------------------d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l 307 (374)
T PLN03032 266 --------------------------------------DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYL 307 (374)
T ss_pred --------------------------------------CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 234455554 57899999999999999999999999999999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.++|++. +++++..|.+++|+|+.+. .+. +. +|+. +.. . +..+|+++ +++++++.+|.|++.|+
T Consensus 308 ~~~l~~~-~~~~~~~p~~~~V~f~~~~----~~~----~~-~~w~-l~~--~--~~~~hi~v-m~~~~~~~id~fi~dl~ 371 (374)
T PLN03032 308 KDRLTEA-GLTCRLNELSSTVVFERPM----DEA----FI-KKWQ-LAC--E--GDIAHVVV-MPNVTVEKLDEFVEELV 371 (374)
T ss_pred HHHHHhC-CCcEEECCCceEEEEcCCC----cHh----Hh-heee-ecc--c--CCEEEEEE-CCCCCHHHHHHHHHHHh
Confidence 9999986 8888888888999997653 112 22 4532 321 1 23899955 68888999999999987
Q ss_pred HH
Q psy3048 346 HQ 347 (367)
Q Consensus 346 ~~ 347 (367)
+.
T Consensus 372 ~~ 373 (374)
T PLN03032 372 EV 373 (374)
T ss_pred cc
Confidence 63
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1e-33 Score=270.10 Aligned_cols=258 Identities=24% Similarity=0.313 Sum_probs=204.2
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
.+|++|+.+|+|+.++++..|.+.+.|+++++|++|+++|+++++++ +..|.+|++++++|.+|.++|+++|+++|+
T Consensus 111 ~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~ 187 (380)
T PRK02769 111 GTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILK 187 (380)
T ss_pred cEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 48999999999999999999999999999888999999999999876 334679999999999999999999999999
Q ss_pred hcC---cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 EYN---IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~~g---i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+|| +|+|||+||+++.++.......+.....+|++++++|||+++|.|+|+++++++. +.. +.....|+...
T Consensus 188 ~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~~~-~~~~~~yl~~~--- 262 (380)
T PRK02769 188 KIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKY-VER-ISVDVDYIGSR--- 262 (380)
T ss_pred HhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhh-hhh-cccCccccCCC---
Confidence 998 7999999999987754221111121225799999999999999999999998643 322 22334454321
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+++..++++ +.++++|++|+.+|.+|++++.+++.++++|+.
T Consensus 263 -------------------------------------d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~ 305 (380)
T PRK02769 263 -------------------------------------DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV 305 (380)
T ss_pred -------------------------------------CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 123344443 467999999999999999999999999999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
++|++. |++++.+|.+++|+|+.+. +++. +|+. +.+. +..+|+++ .++++++.||.|++.|.+
T Consensus 306 ~~L~~~-g~~~~~~p~~~~v~f~~~~-----~~~~-----~~w~-l~~~----~~~~hi~~-~~~~~~~~~~~f~~dl~~ 368 (380)
T PRK02769 306 DRLQAN-GIPAWRNPNSITVVFPCPS-----ERIW-----KKWH-LATS----GNQAHIIT-MPHHNKQQIDSLIDELIF 368 (380)
T ss_pred HHHHhC-CCEEEcCCCceEEEEcCCC-----HHHH-----hCee-Eccc----CCEEEEEE-CCCCCHHHHHHHHHHHHH
Confidence 999885 9999999999999997543 2332 4532 3221 23899954 788899999999999988
Q ss_pred HHHH
Q psy3048 347 QSSE 350 (367)
Q Consensus 347 ~~~~ 350 (367)
....
T Consensus 369 ~~~~ 372 (380)
T PRK02769 369 DLKN 372 (380)
T ss_pred HHhc
Confidence 7653
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3e-33 Score=265.67 Aligned_cols=270 Identities=41% Similarity=0.629 Sum_probs=218.4
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
+++.++++++..+.+..+. ...++.+|++++.+|+++.+++...|++++.+++++++.+|+++|++++++..+++
T Consensus 72 ~al~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 146 (345)
T cd06450 72 LALLAARDRARKRLKAGGG-----RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEG 146 (345)
T ss_pred HHHHHHHHHhhhhhhcccc-----cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCC
Confidence 4666776665544322110 01235799999999999999999999999999998788999999999998765555
Q ss_pred CccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCccee
Q psy3048 82 LIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSA 161 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~ 161 (367)
..+.+|++++++|++|.++|+++|+++|++||+|+|+|+||+.+.++.+...........+|++++++|||+++|+|+|+
T Consensus 147 ~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~ 226 (345)
T cd06450 147 LNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSA 226 (345)
T ss_pred CCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHH
Confidence 55678899999999999999999999999999999999999988765543333223344679999999999999999998
Q ss_pred EEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHH
Q psy3048 162 MWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWM 241 (367)
Q Consensus 162 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
++++ .+++|+
T Consensus 227 ~~~~----------------------------------------------------------------------~~~~~~ 236 (345)
T cd06450 227 VLVR----------------------------------------------------------------------ALKLWA 236 (345)
T ss_pred HHHH----------------------------------------------------------------------HHHHHH
Confidence 7653 145677
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC---chHHHHHHHHHhccCcEEEEEeEEC
Q psy3048 242 TLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD---NDLTNQLYERLMSHKQIYIIKASFQ 318 (367)
Q Consensus 242 ~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~---~~~~~~l~~~L~~~g~~~~~~~~~~ 318 (367)
+++.++.+|++++.++..++++++.+.|+++++++++.++..++++|++++. +..+.++.++|.++|.+++.+..+.
T Consensus 237 ~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~ 316 (345)
T cd06450 237 TLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLG 316 (345)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEEC
Confidence 7888889999999999999999999999999999988777889999998652 2345689999999976666655555
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
+..++|++++.++++++|+|+++++|++
T Consensus 317 ~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 317 GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 6779999887667799999999999976
No 14
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.4e-33 Score=266.29 Aligned_cols=279 Identities=20% Similarity=0.191 Sum_probs=212.3
Q ss_pred cCceEEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 28 KSRLVAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.+.-.|++|+.+|.|. ...++..|+++++++.+++|.++.+++++.+.+.|+ +|++++.+|.+|++.|++
T Consensus 109 ~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tk------lvais~vSn~tG~~~pv~ 182 (405)
T COG0520 109 KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTK------LVALSHVSNVTGTVNPVK 182 (405)
T ss_pred cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCce------EEEEECccccccccchHH
Confidence 3446788899999995 455566799999999998999999999999988885 999999999999999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|+++||++|++++||+||+.+.++.+... + .||++++++|||+++|.|+|++|++++. +... .++...
T Consensus 183 ~I~~la~~~ga~v~VDaaq~~~h~~idv~~-----l-~~Df~afsgHKwl~gP~GiGvLy~r~~~-l~~l----~P~~~g 251 (405)
T COG0520 183 EIAELAHEHGALVLVDAAQAAGHLPIDVQE-----L-GCDFLAFSGHKWLLGPTGIGVLYVRKEL-LEEL----EPFLGG 251 (405)
T ss_pred HHHHHHHHcCCEEEEECccccCccCCCchh-----c-CCCEEEEcccccccCCCceEEEEEchHH-Hhhc----CCcccC
Confidence 999999999999999999999888765422 2 5699999999999999999999997643 3322 232222
Q ss_pred CCC-CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 184 TDA-PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
+.. +..+....+ .+..++.-.++++.+ -...+.+.++++.+...|++++.++.++++
T Consensus 252 g~~~~~~~~~~~~--------~~~~~p~rfe~gTpn--------------~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~ 309 (405)
T COG0520 252 GGMIEYVSRDEGV--------TLAELPLRFEAGTPN--------------IAGAIGLAAALDYLLEIGMEAIEAHERELT 309 (405)
T ss_pred CCceeeecccccc--------cccCcchhhccCCch--------------HHHHHhHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 221 000000000 111111122222221 123467778899999999999999999999
Q ss_pred HHHHHHhcCCCCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECC---------eeEEEEEecCC
Q psy3048 263 KKFADLVEKDDRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQG---------RPFLRFVVTSP 330 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---------~~~lRi~~~~~ 330 (367)
+|+.++|+++|+++++.++ ..++++|.+.+. .+.++...|.++| +.+..+.... ...+|+|+ +.
T Consensus 310 ~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~--~~~dv~~~L~~~g-I~vr~g~~ca~p~~~~~~~~~~iR~S~-~~ 385 (405)
T COG0520 310 EYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI--HPHDVATLLDEKG-IAVRAGHHCAQPLHRLLGVDATIRASL-HL 385 (405)
T ss_pred HHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC--CHHHHHHHHHhCC-eEEEeccccccHHHHhcCCCCceEEEE-ee
Confidence 9999999999999999875 689999999763 3789999999999 4443332222 22399976 79
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy3048 331 ETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~ 349 (367)
|||+||||+|+++|+++.+
T Consensus 386 YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 386 YNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999864
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=5.2e-28 Score=231.93 Aligned_cols=264 Identities=20% Similarity=0.257 Sum_probs=199.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+..|++++.+|+++.++++..|++++.|+.++++.+|+++|++++++++ .+|++++++|++|.+.|+++|.++|
T Consensus 104 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 104 KPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred CceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHH
Confidence 4578889999999999999999999999988888999999999998764 3677788889999999999999999
Q ss_pred hhcCcEEEEecccccccccChhhh--hhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~--~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++|||++|+++.+...... ... ....+|++++++|||+.+|.++|+++++++..+.. +....+|+.....
T Consensus 178 ~~~g~~livD~a~~~~~~~~~~~~~~~~~-~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~-l~~~~~~~~~~~~- 254 (371)
T PRK13520 178 LENGIFLHVDAAFGGFVIPFLDDPPNFDF-SLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDA-LAVDTPYLTSKKQ- 254 (371)
T ss_pred HHcCCCEEEEecchhHHHHhhcCCCCccc-cCCCCceEEECCccccCccCCceEEEEcCHHHHHh-hcccCccccCCCC-
Confidence 999999999999987654321110 111 12346999999999999899999999876654432 2222233322110
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+ ...+++ .....+++++++.++.+|++++.++..++++++.
T Consensus 255 -------~-------------------------------~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 296 (371)
T PRK13520 255 -------A-------------------------------TLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLA 296 (371)
T ss_pred -------c-------------------------------ceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHH
Confidence 0 000111 0224677888888888999999999999999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
++|+++ |++++.++..++++|.+++ ..++.++|.++|+. +.. ..+..++|+++ ++++|++||+++++.|++
T Consensus 297 ~~L~~~-g~~~~~~~~~~~v~~~~~~----~~~v~~~L~~~gi~-v~~--~~~~~~iRis~-~~~~t~edi~~~~~~l~~ 367 (371)
T PRK13520 297 EELKER-GFEPVIEPVLNIVAFDDPN----PDEVREKLRERGWR-VSV--TRCPEALRIVC-MPHVTREHIENFLEDLKE 367 (371)
T ss_pred HHHHhC-CCEEecCCCceEEEEecCC----HHHHHHHHHHCCce-ecc--CCCCCEEEEEE-ECCCCHHHHHHHHHHHHH
Confidence 999988 8885556667888887652 56888899888843 332 23345899976 568999999999999998
Q ss_pred HHH
Q psy3048 347 QSS 349 (367)
Q Consensus 347 ~~~ 349 (367)
+++
T Consensus 368 ~~~ 370 (371)
T PRK13520 368 VKK 370 (371)
T ss_pred Hhh
Confidence 754
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=2.5e-27 Score=227.44 Aligned_cols=258 Identities=20% Similarity=0.277 Sum_probs=193.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|+++.++++..|++++.+++++++.+|+++|++++++.+ ..++.++++|++|.++|+++|.++||
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~ 180 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIAL 180 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHH
Confidence 467788999999999999999999999998889999999999997754 24555557899999999999999999
Q ss_pred hcCcEEEEecccccccccCh-------hhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 111 EYNIWLHVDAAYAGSALLLP-------EYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|+++|||+||+++.+... ..... ...+|++++++|||+.+|.++|++++++++.+.. +....+|+..
T Consensus 181 ~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~---~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~-l~~~~~~~~~ 256 (373)
T TIGR03812 181 ENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS---LPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKY-LSVDAPYLTV 256 (373)
T ss_pred HcCCeEEEEcCchhHHHHHHhcCCCCCCcccc---CCCCCEEEECccccCCCcCCceEEEEeCHHHHhh-hcccCcccCC
Confidence 99999999999987654221 11111 1245999999999998898898888766654432 2222233322
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
... +...+++ .....+++++++.++.+|++++.++..+++
T Consensus 257 ~~~---------------------------------------~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~ 297 (373)
T TIGR03812 257 KKQ---------------------------------------ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT 297 (373)
T ss_pred CCC---------------------------------------cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 110 0000111 123467788888888999999999999999
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++++++|+++ |++.+.++..++++|++++ ..++.++|.++|++ +... .++.++|+++ +++++++|+|++++
T Consensus 298 ~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~----~~~v~~~L~~~gi~-v~~~--~~~~~iRis~-~~~~t~edid~l~~ 368 (373)
T TIGR03812 298 RYLVEELKKI-GFEPVIEPVLNIVAFEVDD----PEEVRKKLRDRGWY-VSVT--RCPKALRIVV-MPHVTREHIEEFLE 368 (373)
T ss_pred HHHHHHHHhC-CCeEEcCCCceEEEEEeCC----HHHHHHHHHHCCce-eccC--CCCCEEEEEE-ECCCCHHHHHHHHH
Confidence 9999999998 5655555678888888753 35788899988853 4322 2456899976 56889999999999
Q ss_pred HHHH
Q psy3048 343 EISH 346 (367)
Q Consensus 343 ~l~~ 346 (367)
+|++
T Consensus 369 ~L~~ 372 (373)
T TIGR03812 369 DLKE 372 (373)
T ss_pred HHhh
Confidence 9976
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=3.6e-27 Score=218.88 Aligned_cols=264 Identities=17% Similarity=0.155 Sum_probs=201.3
Q ss_pred CceEEEecCCcchhHHHHHHhC---CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIG---DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~---g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.+-.|++|..+|.++.+.+++. |++|.+++++.+|.+|+++|+++|+++| .+|++.+.+|.+|++.||++|
T Consensus 90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T------~LVSim~aNnE~G~IQpI~ei 163 (386)
T COG1104 90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDT------ILVSIMHANNETGTIQPIAEI 163 (386)
T ss_pred CCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCc------eEEEEEecccCeeecccHHHH
Confidence 3568999999999999999886 9999999999999999999999999987 699999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+++||++|+++|+|++|+.|-++.+... . .+|++++|+||+ .+|.|+|++|+++.-.+ .+.+..+.
T Consensus 164 ~~i~k~~~i~fHvDAvQa~Gkipi~~~~---~---~vD~ls~SaHK~-~GpkGiGaLyv~~~~~~-------~p~i~GGg 229 (386)
T COG1104 164 GEICKERGILFHVDAVQAVGKIPIDLEE---L---GVDLLSFSAHKF-GGPKGIGALYVRPGVRL-------EPLIHGGG 229 (386)
T ss_pred HHHHHHcCCeEEEehhhhcCceeccccc---c---CcceEEeehhhc-cCCCceEEEEECCCCcc-------CceeccCc
Confidence 9999999999999999999888765322 1 259999999996 55999999999654322 23344443
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+ +.+.|+|+.- -....++..+++ +..+.++....+...+.++|
T Consensus 230 Q--------------------------E~g~RsGTen----------v~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l 272 (386)
T COG1104 230 Q--------------------------ERGLRSGTEN----------VPGIVGFGKAAE-IAVEELEEENARLRKLRDRL 272 (386)
T ss_pred C--------------------------CCCCCCCCcc----------HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 3 1233444320 011233333333 24566777888899999999
Q ss_pred HHHhcCC-CCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--------------------CCee
Q psy3048 266 ADLVEKD-DRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------------------QGRP 321 (367)
Q Consensus 266 ~~~L~~~-~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------------~~~~ 321 (367)
.+.|.+. |++.+.+.+ -.++++|.+++.. .+.+.-.|...| ++++.++. ....
T Consensus 273 ~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~--gE~ll~~L~~~g-I~vStGSACsS~~~~pShVL~AmG~~~e~a~~ 349 (386)
T COG1104 273 EDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE--GESLLLALDLAG-IAVSTGSACSSGSLEPSHVLRAMGISEELAHG 349 (386)
T ss_pred HHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc--HHHHHHhccccC-eEEeccccccCCCCCccHHHHHcCCChHHhCc
Confidence 9999875 888887643 3467788877533 566777777777 44543211 1246
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.+|||+ ..+||++|+|++++.+++++++++.
T Consensus 350 siR~S~-g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 350 SIRFSL-GRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred cEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 899987 6899999999999999999998764
No 18
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.6e-26 Score=224.02 Aligned_cols=278 Identities=15% Similarity=0.075 Sum_probs=198.5
Q ss_pred CceEEEecCCcchh----HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s----~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+.-.|++++.+|++ +...++..|+++++++.+.++.+|++++++++++++ .+|++++++|++|.+.|+++
T Consensus 108 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t------~lv~i~~~~n~tG~~~~~~~ 181 (401)
T PRK10874 108 PGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRT------RILALGQMSNVTGGCPDLAR 181 (401)
T ss_pred CcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCc------EEEEEeCCcccccCcCCHHH
Confidence 34578888999977 445567789999999998788999999999997766 48889999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|+++|+++|+++++|++|+.+.++.+. ... .+|++++++||+ ++|+|+|+++.++ +.++.. .++...+
T Consensus 182 i~~l~~~~g~~~ivD~a~~~g~~~~~~-----~~~-~~d~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~~~~~~~ 249 (401)
T PRK10874 182 AITLAHQAGMVVMVDGAQGAVHFPADV-----QAL-DIDFYAFSGHKL-YGPTGIGVLYGKS-ELLEAM----SPWQGGG 249 (401)
T ss_pred HHHHHHHcCCEEEEECCcccccccCCc-----hhc-CCCEEEEecccc-cCCCccEEEEEch-HHHhcC----CCeecCC
Confidence 999999999999999999876654432 111 359999999995 5699999999864 333321 1122111
Q ss_pred CCCCCCCCCCchhhhhhcccCC-CcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALG-LPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
.. ..... |...... .| ..+..........+++.+++..+...|++++.++..++++
T Consensus 250 ~~---~~~~~-----~~~~~~~~~~---------------~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~ 306 (401)
T PRK10874 250 KM---LTEVS-----FDGFTPQSAP---------------WRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLAT 306 (401)
T ss_pred cc---eEeec-----cCccCCCCCh---------------hhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 10 00000 0000000 00 1111111111244677778887777888888999999999
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCCH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~~ 334 (367)
++.+.|++++|++++.++..++++|.+++. ...++.+.|.++|+. +..+.. ...+++|+|+ +.++|+
T Consensus 307 ~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~--~~~~~~~~L~~~gI~-v~~g~~~~~~~~~~~g~~~~iRiS~-~~~nt~ 382 (401)
T PRK10874 307 LAEDALAKLPGFRSFRCQDSSLLAFDFAGV--HHSDLVTLLAEYGIA-LRAGQHCAQPLLAALGVTGTLRASF-APYNTQ 382 (401)
T ss_pred HHHHHHhcCCCEEEeCCCCCcEEEEEECCc--CHHHHHHHHHHCCcE-EeccccchHHHHHHhCCCCEEEEEe-cccCCH
Confidence 999999999999988777778888887542 246888888888854 333221 1146899976 688999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3048 335 CDVAFAWNEISHQSSEM 351 (367)
Q Consensus 335 edid~li~~l~~~~~~~ 351 (367)
+||++++++|+++++.+
T Consensus 383 edid~ll~al~~~~~~~ 399 (401)
T PRK10874 383 SDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987754
No 19
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=2.4e-26 Score=222.61 Aligned_cols=278 Identities=14% Similarity=0.055 Sum_probs=196.9
Q ss_pred ceEEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++.+|++. ...++..|++++.++.+.++.+|+++|++++++++ .+|++++++|++|.+.|+++|
T Consensus 106 gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t------~lv~i~~~~n~tG~~~~~~~i 179 (398)
T TIGR03392 106 GDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRT------RILALGQMSNVTGGCPDLARA 179 (398)
T ss_pred CCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCc------eEEEEECccccccccCCHHHH
Confidence 34788889999873 44567789999999998778899999999997765 488899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+++||++|+++++|++|+.+....+... . .+|++++++||+ ++|.|+|+++.++. .++.. +++.....
T Consensus 180 ~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~---~~d~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~~~~ 247 (398)
T TIGR03392 180 ITLAHQYGAVVVVDGAQGVVHGPPDVQA---L---DIDFYAFSGHKL-YGPTGIGVLYGKTE-LLEAM----PPWQGGGK 247 (398)
T ss_pred HHHHHHcCCEEEEEhhhhcCCCCCChhh---c---CCCEEEEecccc-cCCCceEEEEEcHH-HHhhC----CCeecCCc
Confidence 9999999999999999987655432211 1 359999999995 56889999987543 33221 11221111
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.........+ .....| ..+..........+++.++++.+...|++++.++..++++++
T Consensus 248 ~~~~~~~~~~-------~~~~~~---------------~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l 305 (398)
T TIGR03392 248 MLSHVSFDGF-------IPQAVP---------------HRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLA 305 (398)
T ss_pred eEeecccccc-------ccCCCh---------------hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 0000000000 000001 011110111123467778888777778889999999999999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCCHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~~ed 336 (367)
.+.|++++|+++..++..++++|.+++. ...++.+.|.++|+ .+..+.. ...+++|+|+ ++++|++|
T Consensus 306 ~~~l~~l~g~~~~~~~~~~i~~~~~~~~--~~~~l~~~L~~~gI-~v~~g~~~~~~~~~~~g~~~~iRvS~-~~~~t~~e 381 (398)
T TIGR03392 306 EERLAQLPGFRSFRCPGSSLLAFDFAGV--HHSDLAALLAESGI-ALRAGQHCAQPLMAALGVSGTLRASF-APYNTQQD 381 (398)
T ss_pred HHHHhcCCCeEEeCCCCCcEEEEEeCCc--CHHHHHHHHHhCCE-EEecCccchHHHHHHhCCCCEEEEEe-eccCCHHH
Confidence 9999999999988766778888887642 25688888888874 4443321 1135899976 68899999
Q ss_pred HHHHHHHHHHHHHHh
Q psy3048 337 VAFAWNEISHQSSEM 351 (367)
Q Consensus 337 id~li~~l~~~~~~~ 351 (367)
|++++++|+++++++
T Consensus 382 i~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 382 VDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 20
>KOG1383|consensus
Probab=99.95 E-value=5.6e-27 Score=217.59 Aligned_cols=298 Identities=20% Similarity=0.222 Sum_probs=231.7
Q ss_pred hHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCC
Q psy3048 3 SILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~ 81 (367)
++++|+.++..+.++. +. ...+.++++.+.|.++.+++++++.+++.|+++ .++++|+....+.+++++
T Consensus 150 s~l~~~k~~~~~r~~~-k~------I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNt--- 219 (491)
T KOG1383|consen 150 SGLAAKKSYRNRRKAQ-KG------IDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENT--- 219 (491)
T ss_pred HHHHHHHHHHHHHHhc-cC------CCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccce---
Confidence 4456666666665543 21 446678889999999999999999999999998 679999999999999998
Q ss_pred CccEEEEEecCCCcccccCChhhHHHHHhh-cCcEEEEecccccccccC-----hhhhhhhCCCCCcceeeecccccccc
Q psy3048 82 LIPCCLVATLGTTGTCAFDNLEELGPICQE-YNIWLHVDAAYAGSALLL-----PEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~-~gi~l~vD~a~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
++++.+.+++++|.++|+++|+++..+ |++++|||+|.|++..+. .+++++.++ +-+++.++||+..+
T Consensus 220 ---i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~---V~Sisa~~HKYGl~ 293 (491)
T KOG1383|consen 220 ---IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPG---VTSISADGHKYGLA 293 (491)
T ss_pred ---EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCC---ceeEeeccceeeee
Confidence 589999999999999999999999999 999999999999877641 244444444 49999999999999
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccccc
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFR 235 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
|.|+|++++++.+.+... |+. ..+|.|..+.+|+.+. +++|++
T Consensus 294 ~~G~~~vl~r~k~~~~~q------~~~--------------~~~w~Gg~y~s~Tlng---SR~g~~-------------- 336 (491)
T KOG1383|consen 294 PAGSSWVLYRNKELLPHQ------LFF--------------HTDWLGGIYASPTLNG---SRPGSQ-------------- 336 (491)
T ss_pred ecCcEEEEEcccccccce------EEE--------------eccccCccccCccccc---CCcccH--------------
Confidence 999999999887655322 121 2356666666665422 334432
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe
Q psy3048 236 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA 315 (367)
Q Consensus 236 ~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~ 315 (367)
.++.|+++-.+|.+|+.+..+++.+.+.++++.|++++++.++.+|....+.|.-.. -.-.++.+.|...||+....
T Consensus 337 va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~--~~i~elsd~l~~~GW~lnal- 413 (491)
T KOG1383|consen 337 VAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND--VNIFELSDLLRKKGWILNAL- 413 (491)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc--cchhhhhHHHHhcCcCcccc-
Confidence 368899999999999999999999999999999999999999998765555553221 12358889999999865432
Q ss_pred EECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCCC
Q psy3048 316 SFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGSS 358 (367)
Q Consensus 316 ~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~~ 358 (367)
+-+..+.++++..+..++-.|+|+..|+++++++....++.
T Consensus 414 --q~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~~ 454 (491)
T KOG1383|consen 414 --QFPAAIHICVTRVHAREDVADRFVADIRKVVEELKSLPESK 454 (491)
T ss_pred --CCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 22235555555555567778999999999999987666544
No 21
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=4.7e-26 Score=221.13 Aligned_cols=276 Identities=14% Similarity=0.088 Sum_probs=195.5
Q ss_pred ceEEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++.+|.+. ...++..|++++.++.++++.+|+++|++++++++ .+|++++++|++|.+.|+++|
T Consensus 113 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t------~lv~l~~~~n~tG~~~~~~~i 186 (406)
T PRK09295 113 GDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERT------RLLAITHVSNVLGTENPLAEM 186 (406)
T ss_pred cCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCc------EEEEEecchhcccccCCHHHH
Confidence 44678888898874 44556689999999998889999999999997655 489999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+++||++|+++++|++|+.+..+.+.. . ..+|++++++|| +++|.|+|+++++++ .+... +++.....
T Consensus 187 ~~~~~~~~~~vivD~a~~~g~~~~~~~-----~-~~~D~~~~s~~K-~~gp~G~G~l~~~~~-~~~~~----~~~~~g~~ 254 (406)
T PRK09295 187 IALAHQHGAKVLVDGAQAVMHHPVDVQ-----A-LDCDFYVFSGHK-LYGPTGIGILYVKEA-LLQEM----PPWEGGGS 254 (406)
T ss_pred HHHHHHcCCEEEEEcccccCccccCch-----h-cCCCEEEeehhh-ccCCCCcEEEEEchH-hHhhC----CCcccCCc
Confidence 999999999999999998876544321 1 135999999999 556999999999653 23221 22222211
Q ss_pred C-CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 186 A-PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 186 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. ........+ .+ ...| ..+..........+++.++++.+...|++++.++..+++++
T Consensus 255 ~~~~~~~~~~~---~~----~~~~---------------~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 312 (406)
T PRK09295 255 MIATVSLTEGT---TW----AKAP---------------WRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_pred eeeeeecCCcc---cc----CCch---------------hhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 0 000000000 00 0000 11111111112346777888888777999999999999999
Q ss_pred HHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCCH
Q psy3048 265 FADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~~ 334 (367)
+.+.|++++|++++.+ +..++++|.+++ ....++.+.|.++|+ .+..+.. ..++++|+|+ +.+||+
T Consensus 313 l~~~l~~~~~~~~~~~~~~~~iv~~~~~~--~~~~~~~~~L~~~gI-~v~~g~~c~~~~~~~~~~~~~iRiS~-~~ynt~ 388 (406)
T PRK09295 313 ALSQLESVPDLTLYGPQNRLGVIAFNLGK--HHAYDVGSFLDNYGI-AVRTGHHCAMPLMAYYNVPAMCRASL-AMYNTH 388 (406)
T ss_pred HHHHHhcCCCEEEeCCCCCceEEEEEECC--cCHHHHHHHHHhCCe-EEeccccchHHHHHHHCCCCEEEEEc-cCCCCH
Confidence 9999999999999875 346888998864 235678888877774 4432211 1135799976 799999
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQSS 349 (367)
Q Consensus 335 edid~li~~l~~~~~ 349 (367)
+|||+++++|+++.+
T Consensus 389 ~did~l~~~l~~i~~ 403 (406)
T PRK09295 389 EEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999854
No 22
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=6.5e-26 Score=217.87 Aligned_cols=271 Identities=16% Similarity=0.198 Sum_probs=194.3
Q ss_pred CceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+.-.|+++..+|.++... ++..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~------~~v~~~~~~n~tG~~~~~~~ 158 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNT------KLIVVSHASNVTGTILPIEE 158 (376)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCC------eEEEEECCCCCccccCCHHH
Confidence 345677788899886543 44569999999988788999999999996644 58889999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|.++||++|+++++|++|+.+..+.+.. ...+|++++++|||+++|.|+|++++++...+.........+. ..
T Consensus 159 i~~l~~~~~~~livD~a~~~g~~~~~~~------~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~-~~ 231 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGVIPIDMT------ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSH-SA 231 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCccCCCch------hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccc-cc
Confidence 9999999999999999998877654321 1246999999999999999999999976542221110000000 00
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.+ ..+.. +. ..+..........+++..+++.+...|++++.++..+++++
T Consensus 232 ---------~~----------~~~~~-~~----------~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 232 ---------LI----------DQPSE-LP----------DRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred ---------cc----------ccccc-ch----------hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 00 00000 00 00110001112236667788888888999999999999999
Q ss_pred HHHHhcCCCCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE-----------CCeeEEEEEec
Q psy3048 265 FADLVEKDDRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF-----------QGRPFLRFVVT 328 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-----------~~~~~lRi~~~ 328 (367)
+.+.|.+++|++++.+. ..++++|.+++. ...++.+.|.++ | +.+..+.+ .....+|+++
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~L~~~~g-i~v~~g~~~~~~~~~~~g~~~~~~iRis~- 357 (376)
T TIGR01977 282 LLNGLREINKVKIYGPADPANRVGVVSFTVEGI--DSEEVADILDEKFD-IATRTGLHCAPLAHKTIGTFATGTIRLSL- 357 (376)
T ss_pred HHHHHhcCCCeEEeCCCCccccCCeEEEEECCC--CHHHHHHHHhccCC-EEEEcccccchHHHHHhCCCCCCeEEEec-
Confidence 99999999999988642 357888888642 356888889887 5 44443221 1346899975
Q ss_pred CCCCCHHHHHHHHHHHHH
Q psy3048 329 SPETNQCDVAFAWNEISH 346 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~ 346 (367)
+.++|++||++++++|++
T Consensus 358 ~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 358 GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCCCCHHHHHHHHHHHhh
Confidence 789999999999999975
No 23
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=1.6e-25 Score=218.55 Aligned_cols=278 Identities=12% Similarity=0.062 Sum_probs=195.3
Q ss_pred ceEEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++.+|.+. ...++..|++++.++++.++.+|+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 122 gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t------~lv~i~~~~n~tG~~~~~~~I 195 (424)
T PLN02855 122 GDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKT------KLVATHHVSNVLGSILPVEDI 195 (424)
T ss_pred cCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCc------eEEEEeCccccccccCCHHHH
Confidence 44688888889874 34456689999999987777899999999997654 488999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+++||++|+++++|++|+.+..+.+. ... .+|++++++|| +++|.|+|+++++.. .+.+. ++++....
T Consensus 196 ~~l~~~~g~~vivD~a~~~g~~~~~~-----~~~-~~d~~~~s~~K-~~gp~G~G~l~~~~~-~~~~~----~p~~~g~~ 263 (424)
T PLN02855 196 VHWAHAVGAKVLVDACQSVPHMPVDV-----QTL-GADFLVASSHK-MCGPTGIGFLWGKSD-LLESM----PPFLGGGE 263 (424)
T ss_pred HHHHHHcCCEEEEEhhhhcCCcCCCc-----hhc-CCCEEEeeccc-ccCCCccEEEEEchh-hhhcC----CCEecCCC
Confidence 99999999999999999876554321 111 35999999999 567999999999643 33221 22221111
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. ....+ .++.. ....+ ..|..........+++.++++.+...|++++.++..++++++
T Consensus 264 ~----~~~~~--~~~~~-~~~~~---------------~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l 321 (424)
T PLN02855 264 M----ISDVF--LDHST-YAPPP---------------SRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYL 321 (424)
T ss_pred c----eeeee--cCccc-cCCCh---------------hhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 0 00000 00000 00001 011111111123366677788777779999999999999999
Q ss_pred HHHhcCCCCeEEeCCC------CceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---------CCeeEEEEEecC
Q psy3048 266 ADLVEKDDRFELVCPP------SMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---------QGRPFLRFVVTS 329 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~------~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---------~~~~~lRi~~~~ 329 (367)
.+.|++++|++++.+. ..++++|.+++. ...++.+.|.++ | +.+..+.+ .-..++|+|+ +
T Consensus 322 ~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~--~~~~v~~~L~~~~g-I~v~~g~~c~~~~~~~~g~~~~iRiS~-~ 397 (424)
T PLN02855 322 YEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI--HPTDLSTFLDQQHG-VAIRSGHHCAQPLHRYLGVNASARASL-Y 397 (424)
T ss_pred HHHHhcCCCEEEeCCCcccccCcccEEEEEECCc--CHHHHHHHhcccCC-EEEechhhhhHHHHHHhCCCCeEEEEe-c
Confidence 9999999999998642 347888988642 256788888887 6 44442221 1135799976 7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~ 351 (367)
++||++||++++++|+++++.+
T Consensus 398 ~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 398 FYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998764
No 24
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=2.8e-25 Score=214.03 Aligned_cols=263 Identities=14% Similarity=0.160 Sum_probs=190.0
Q ss_pred ceEEEecCCcchhHHHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|+++..+|+++.... +..|++++.+++++++.+|+++|++++++.+ .++++++++|++|.+.|+++|.
T Consensus 90 ~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~ 163 (382)
T TIGR03403 90 KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKT------ALVSVMWANNETGMIFPIKEIG 163 (382)
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCC------eEEEEEcccCCCccccCHHHHH
Confidence 346888889999987664 3479999999998889999999999997655 4888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|+++|+++++|++|+.+..+.+.. .. .+|++++++||| ++|+|+|+++++++..+ .+ .+.....
T Consensus 164 ~la~~~g~~~ivD~a~~~g~~~~~~~---~~---~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~------~p-~~~g~~~ 229 (382)
T TIGR03403 164 EICKERGVLFHTDAVQAIGKIPVDVQ---KA---GVDFLSFSAHKF-HGPKGVGGLYIRKGVEL------TP-LFHGGEH 229 (382)
T ss_pred HHHHHcCCEEEEechhhcCCCccCcc---cc---CCCEEEEcchhh-CCCCceEEEEECCCCCC------CC-cccCCCC
Confidence 99999999999999998766544321 11 359999999998 56999999999765321 11 1111110
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.. ..++|+ . .....+++..+++.. .++++...++..++++++.
T Consensus 230 -----~~---------------------~~~~gt-------~---~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 230 -----MG---------------------GRRSGT-------L---NVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred -----CC---------------------CcccCC-------c---ChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 00 000111 0 001123555666544 3457888899999999999
Q ss_pred HHhcCCCCeEEeCCC--C-ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------------C-----CeeEE
Q psy3048 267 DLVEKDDRFELVCPP--S-MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------------Q-----GRPFL 323 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~--~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------------~-----~~~~l 323 (367)
+.|++++|+++..++ . .++++|.+++ ....++...|.++|+ .+..+.. . ....+
T Consensus 273 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~~~gI-~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~i 349 (382)
T TIGR03403 273 DALLELPDVFVVGDREHRVPNTILISIKG--VEGEAMLWDLNKAGI-AASTGSACASEDLEANPVMVAIGADKELAHTAI 349 (382)
T ss_pred HHHhcCCCEEEECCCCCCcCCEEEEEeCC--CCHHHHHHhhccCCE-EEEchhccCCCCCCcCHHHHHcCCChHHhCeeE
Confidence 999999999998753 2 3567777754 235677778887774 4432110 0 12579
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
|+|+ +++||++|||+++++|++++++++.
T Consensus 350 R~s~-~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 350 RLSL-SRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred EEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9975 7899999999999999999887653
No 25
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=1.3e-25 Score=217.83 Aligned_cols=279 Identities=13% Similarity=0.102 Sum_probs=195.9
Q ss_pred CceEEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+.-.|++++.+|.+.. ..++..|++++.+++++++.+|+++|++++.+++ .+|++++++|++|.+.|+++
T Consensus 107 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~------~lv~~~~~~~~tG~~~~~~~ 180 (403)
T TIGR01979 107 AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKT------KLVAITHVSNVLGTVNPVEE 180 (403)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCC------eEEEEEcccccccccCCHHH
Confidence 3457888899998853 4566789999999998889999999999997655 58899999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|.++||+||+++++|++|+.+..+.+. ... .+|++++++||++ +|.|+|++++++. .+... .++....
T Consensus 181 i~~~~~~~~~~~ivD~a~~~g~~~~~~-----~~~-~~d~~~~s~~K~~-gp~G~g~l~~~~~-~~~~~----~~~~~g~ 248 (403)
T TIGR01979 181 IAKLAHQVGAKVLVDGAQAVPHMPVDV-----QAL-DCDFYVFSGHKMY-GPTGIGVLYGKEE-LLEQM----PPFLGGG 248 (403)
T ss_pred HHHHHHHcCCEEEEEchhhcCccccCc-----ccc-CCCEEEEeccccc-CCCCceEEEEchH-HHhcC----CCeecCC
Confidence 999999999999999999877654321 111 3599999999976 6999999998643 23221 1122111
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
... ....+ . ...+..+. ..+..........+++.++++.+...|++++.++..+++++
T Consensus 249 ~~~---~~~~~---~--~~~~~~~~--------------~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 249 EMI---AEVSF---E--ETTYNEAP--------------HKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred Cce---eeccc---C--ccccCCCh--------------hhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 000 00000 0 00000000 01111011112346667777777677889999999999999
Q ss_pred HHHHhcCCCCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE---------ECCeeEEEEEecCCC
Q psy3048 265 FADLVEKDDRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS---------FQGRPFLRFVVTSPE 331 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---------~~~~~~lRi~~~~~~ 331 (367)
+.+.|++++|++++.++ ..++++|.+++. ...++.+.|.++|+ .+..+. ....+++|+|+ +++
T Consensus 307 l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~L~~~gI-~v~~g~~~~~~~~~~~~~~~~iRiS~-~~~ 382 (403)
T TIGR01979 307 ALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV--HPHDVGTILDEEGI-AVRSGHHCAQPLMRRFGVPATCRASF-YIY 382 (403)
T ss_pred HHHHHhcCCCEEEeCCCCccccCceEEEEeCCc--CHHHHHHHHhhCCE-EEcchhhhhHHHHHHhCCCCEEEEEe-ccC
Confidence 99999999999998653 367888887642 24578888887874 443221 11246899976 688
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy3048 332 TNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~ 351 (367)
++++|+++++++|+++++.+
T Consensus 383 ~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 383 NTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 26
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=1.4e-25 Score=215.91 Aligned_cols=262 Identities=15% Similarity=0.136 Sum_probs=189.5
Q ss_pred ceEEEecCCcchhHHHHHH---hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~---~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-+|+++..+|+++..... ..|++++.++.++++.+|+++|++++++++ .++++++++|++|.+.|+++|.
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~------~lv~i~~~~n~tG~~~~~~~I~ 159 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDT------ALVSVMWANNETGTIFPIEEIG 159 (379)
T ss_pred CCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCc------EEEEEEcccCCeeecccHHHHH
Confidence 4578888999999765543 369999999988788999999999997655 4888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||++|+++++|++|+.+..+.+.. . ..+|++++++|| +++|.|+|++++++...+ .+ ++..+..
T Consensus 160 ~l~~~~g~~vivD~~~~~g~~~~~~~-----~-~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~------~p-~~~g~~~ 225 (379)
T TIGR03402 160 EIAKERGALFHTDAVQAVGKIPIDLK-----E-MNIDMLSLSGHK-LHGPKGVGALYIRKGTRF------RP-LLRGGHQ 225 (379)
T ss_pred HHHHHcCCEEEEECcccccccccCcc-----c-CCCCEEEEcHHH-cCCCCceEEEEECCCCCC------CC-cccCCcc
Confidence 99999999999999998876544321 1 145999999999 678999999999754211 11 1111100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. ...+.|+ ......+++.++++.. .++++++.++..++.+++.
T Consensus 226 -----~---------------------~~~~~gt----------~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~ 268 (379)
T TIGR03402 226 -----E---------------------RGRRAGT----------ENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLE 268 (379)
T ss_pred -----C---------------------CCcCCCC----------ccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 0 0000111 0001224455556554 4567888899999999999
Q ss_pred HHhcC-CCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--------------------CCeeE
Q psy3048 267 DLVEK-DDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------------------QGRPF 322 (367)
Q Consensus 267 ~~L~~-~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------------~~~~~ 322 (367)
+.|++ ++++++..++. .++++|.+...+ ..++...|.++|+ .+..+.. ...+.
T Consensus 269 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI-~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~ 345 (379)
T TIGR03402 269 AGLLARIPDARLNGDPTKRLPNTVNISFEYIE--GEAILLLLDMEGI-CASSGSACTSGSLEPSHVLRAMGVPHTAAHGS 345 (379)
T ss_pred HHHHhhCCCEEEeCCCccCCCCEEEEEecCCC--HHHHHHhhccCCE-EEEchhhcCCCCCCcCHHHHHcCCChhhcCce
Confidence 99986 89999876532 357777765422 5688888877774 4432211 01358
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+|+|+ +.+||++|||++++.|+++++++.
T Consensus 346 vR~S~-~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 346 IRFSL-SRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred EEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99976 789999999999999999988754
No 27
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.95 E-value=1.7e-25 Score=229.46 Aligned_cols=294 Identities=14% Similarity=0.088 Sum_probs=208.0
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
++|+++|.|...+ +..+|.+|++|.+.|.+....+...|++++.|+++++|.+|+++|++++++. +
T Consensus 561 agL~aiR~y~~~r-----------ge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~---~ 626 (939)
T TIGR00461 561 AGLRVIRSYHESR-----------GENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQH---G 626 (939)
T ss_pred HHHHHHHHHHHhc-----------CCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhc---C
Confidence 5788999877433 1134788999999999998889999999999999889999999999999752 2
Q ss_pred CccEEEEEecCCCcccccCC-hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-----c
Q psy3048 82 LIPCCLVATLGTTGTCAFDN-LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-----T 155 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i~d-l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-----~ 155 (367)
..+.+|++++++| +|.++| +++|+++||++|.+++||+|+......... .+.-.+|++++|.||+|+ +
T Consensus 627 ~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~-----Pg~~GaDi~~~s~HKtf~~P~G~G 700 (939)
T TIGR00461 627 DELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTS-----PGDLGADVCHLNLHKTFCIPHGGG 700 (939)
T ss_pred CceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCC-----ccccCCCEEEecCCccCCCCCCCC
Confidence 2356899999988 799977 999999999999999999999653332211 122246999999999999 5
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccc-cccc
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPL-SRRF 234 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (367)
|+|+|++.+++. +. +|+..... ..+.+. .... +.++.....+ +...
T Consensus 701 GPg~G~i~vr~~--L~-------~~lPg~~v---~~t~d~-----------------~gre----q~Iga~s~~~~g~a~ 747 (939)
T TIGR00461 701 GPGMGPIGVKSH--LI-------PFLPKHDV---VSMITG-----------------IGGS----KSIGSVSAAPYGSAS 747 (939)
T ss_pred CCCeEEEEEhhh--ch-------hhcCCCcc---cccccC-----------------CCCc----cccccccccccCcHH
Confidence 556699999742 32 12211110 000000 0000 0000000001 1112
Q ss_pred cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC----CCceeEEEEEcCC----chHHHHHHHHHhc
Q psy3048 235 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP----PSMGLVCFRLKGD----NDLTNQLYERLMS 306 (367)
Q Consensus 235 ~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~----~~~~~v~f~~~~~----~~~~~~l~~~L~~ 306 (367)
.++..|++++.+|.+|+.+..+....+++|+.++|++ +++++.+ +.++.++|++++. +..+.++.++|.+
T Consensus 748 ~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d 825 (939)
T TIGR00461 748 ILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQD 825 (939)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHh
Confidence 3488999999999999999999999999999999987 5576654 3567788887631 2346789999999
Q ss_pred cCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 307 HKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 307 ~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.|......+ ...+...+|.+ -.++++|||+|++++.++.+++..
T Consensus 826 ~G~hapt~~~pv~g~lmiepT---E~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 826 YGFHAPTLSFPVPGTLMVEPT---ESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred CCeeccccCCccCCeEEEEee---ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 996543322 12344456653 366899999999999999888765
No 28
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=1.5e-25 Score=233.58 Aligned_cols=292 Identities=17% Similarity=0.132 Sum_probs=202.1
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
++|+++|.+...+ +..++.+|++++..|.|...++...|++++.|+++.+|.+|+++|++++++..
T Consensus 573 agL~a~r~~~~~~-----------G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~--- 638 (954)
T PRK05367 573 AGLLAIRAYHESR-----------GEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHA--- 638 (954)
T ss_pred HHHHHHHHHhhcc-----------CCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccC---
Confidence 5677777765432 11246789999999999999999999999999998889999999999997642
Q ss_pred CccEEEEEecCCCccccc-CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc-
Q psy3048 82 LIPCCLVATLGTTGTCAF-DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC- 159 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i-~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~- 159 (367)
..+.+|+++++++. |.+ +|+++|+++||++|+++|||+||..+.+.... .+.-.+|++++++||||+.|.|.
T Consensus 639 ~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-----pg~~GADi~~~s~HK~f~~P~G~G 712 (954)
T PRK05367 639 DNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR-----PGDIGADVSHLNLHKTFCIPHGGG 712 (954)
T ss_pred CCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC-----hhhcCCCEEEecCcccCCCCcCCC
Confidence 12567889998775 665 79999999999999999999999755443221 11124699999999999877664
Q ss_pred ----eeEEEecchhhhhhccCCccccccCCCCCC--CCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc
Q psy3048 160 ----SAMWVKNANHLTNTFFTDRVYLKHTDAPMN--TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR 233 (367)
Q Consensus 160 ----g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
|++++++ .+. +|+........ .....+ ... ..++ ..
T Consensus 713 GPg~G~l~vr~--~l~-------p~lpg~~v~~~~~~~~~g~---------------------v~t----a~~g----~a 754 (954)
T PRK05367 713 GPGVGPIGVKA--HLA-------PFLPGHPVQIAGGETGIGA---------------------VSA----APFG----SA 754 (954)
T ss_pred CCceEEEeecc--ccc-------ccCCCCccCcCCCCCCcCc---------------------chh----HHHH----HH
Confidence 4888863 222 22222111000 000000 000 0010 01
Q ss_pred ccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC--CCceeEEEEEcCC----chHHHHHHHHHhcc
Q psy3048 234 FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP--PSMGLVCFRLKGD----NDLTNQLYERLMSH 307 (367)
Q Consensus 234 ~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~----~~~~~~l~~~L~~~ 307 (367)
..+...|+.++.+|.+|+++..++...+++|+.++|++..++....+ +..+...|++... +..+.++.++|.+.
T Consensus 755 l~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~ 834 (954)
T PRK05367 755 SILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDY 834 (954)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHC
Confidence 13355788899999999999999999999999999987533222222 3355556655321 12357899999999
Q ss_pred CcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 308 KQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 308 g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
|..... ..+...+.++|++ +.+++++|+|+|+++++.+.+++..
T Consensus 835 G~~~~t-~~~pv~~~l~i~p-tE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 835 GFHAPT-MSFPVAGTLMVEP-TESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCeEee-cCCccCCEEEEEe-eecCCHHHHHHHHHHHHHHHHHHHH
Confidence 865433 2233456789976 5688999999999999999888765
No 29
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=3.1e-25 Score=215.35 Aligned_cols=277 Identities=12% Similarity=0.090 Sum_probs=188.7
Q ss_pred ceEEEecCCcchhHHH----HHHhCCcce----EEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC
Q psy3048 30 RLVAYASDQSNSSVEK----SAIIGDVPV----RQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~----~~~~~g~~v----~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d 101 (367)
+.+|++++.+|.+... .++..|+++ +.++.++++.++++++++.++..+. ...+|+++++++.+|.+.|
T Consensus 113 ~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---~t~lv~~~~v~~~tG~~~~ 189 (406)
T TIGR01814 113 RYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGD---DIAVILLSGVQYYTGQLFD 189 (406)
T ss_pred ccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCC---CeEEEEEeccccccceecC
Confidence 4478889999998544 345568887 5666666788999999998864221 1358999999999999999
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
+++|+++||++|++++||++|+.+.++.+... . .+|++++++||||++|+| |++++..+.. ........++.
T Consensus 190 ~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~---~---gvD~~~~s~hK~l~g~pG-~~l~v~~~~~-~~~~p~~~g~~ 261 (406)
T TIGR01814 190 MAAITRAAHAKGALVGFDLAHAVGNVPLDLHD---W---GVDFACWCTYKYLNAGPG-AGAFVHEKHA-HTERPRLAGWW 261 (406)
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCccccccc---C---CCCEEEEcCccccCCCCC-eEEEEehhhh-hhcCCCCCccc
Confidence 99999999999999999999999877654211 1 459999999999988888 7777755432 11111111111
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
..... ..+.. ...+ ...+ ..+.....+.....++.++++.+...|++++.++..++
T Consensus 262 ~~~~~------~~~~~-----------~~~~--~~~~-----~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 317 (406)
T TIGR01814 262 GHARP------TRFKM-----------DNTL--GLIP-----CGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLL 317 (406)
T ss_pred CCCCc------ccccc-----------cccc--CCCc-----cceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 11000 00000 0000 0000 00111111112335666788888788999999999999
Q ss_pred HHHHHHHhcCC----CCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCC
Q psy3048 262 AKKFADLVEKD----DRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETN 333 (367)
Q Consensus 262 a~~l~~~L~~~----~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~ 333 (367)
++++++.|+++ +|++++.+. ..++++|.++ . ...++.+.|.++|+ ++. ..+...+|+|+++.+||
T Consensus 318 ~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~--~~~~~~~~L~~~gi-~v~---~~~~~~iRiS~~~~~nt 390 (406)
T TIGR01814 318 TDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V--PGKAVFQALIKRGV-IGD---KREPSVIRVAPVPLYNT 390 (406)
T ss_pred HHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C--CHHHHHHHHHHCCE-EEe---ccCCCeEEEechhccCC
Confidence 99999999875 468888752 3467888876 1 25678888988884 332 23345899976568999
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQS 348 (367)
Q Consensus 334 ~edid~li~~l~~~~ 348 (367)
++|||+++++|++++
T Consensus 391 ~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 FVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 30
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=1.8e-25 Score=214.49 Aligned_cols=269 Identities=17% Similarity=0.140 Sum_probs=190.6
Q ss_pred cCceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 28 KSRLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.++-.|+++..+|++...+ ++..|++++.++.+.++.+|+++++++++++++ +|++++.+|.+|.+.|++
T Consensus 86 ~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~------lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 86 KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTR------LVSISHVENSTGVRNPIE 159 (371)
T ss_dssp TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTES------EEEEESBETTTTBBSSHH
T ss_pred ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccc------eEEeecccccccEEeeec
Confidence 3455777888999998743 345799999999988899999999999987764 999999999999999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|+++||++|+++++|++|+.+..+.+.- .. .+|++++++|| |++|+|+|+++++++. ..+..+...+ .
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~-----~~-~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~---~ 228 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVPIDLD-----EL-GADFLVFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPG---G 228 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS--TT-----TT-TESEEEEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSS---S
T ss_pred eehhhhhccCCceeEechhcccccccccc-----cc-ccceeeecccc-cCCCCchhhheehhhh-hhcccccccc---c
Confidence 99999999999999999999888765421 11 46999999999 9999999999998743 3332111111 1
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
... .......+. ....+ ..+......-...+++..+++.+...|++++.++..++++
T Consensus 229 ~~~------~~~~~~~~~--~~~~~---------------~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 229 GYL------DFPSLQEYG--LADDA---------------RRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAE 285 (371)
T ss_dssp STT------THHHHHHHC--HHSTT---------------TGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc------ccccchhcc--ccccc---------------ccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHH
Confidence 000 000000000 00001 0011001111233667778888888899999999999999
Q ss_pred HHHHHhcCCCCeEEeCC----CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECC---------eeEEEEEecCC
Q psy3048 264 KFADLVEKDDRFELVCP----PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQG---------RPFLRFVVTSP 330 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---------~~~lRi~~~~~ 330 (367)
++.+.|++++++.++.+ ...++++|.+++. ..+++.+.|.++| +.+..+.... .+++|+|+ ++
T Consensus 286 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~L~~~~-I~~~~G~~~~~~~~~~~~~~~~iRvS~-~~ 361 (371)
T PF00266_consen 286 YLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS--DADDVVKYLEERG-IAVSTGSACAGPSLDILGMGGVIRVSL-HY 361 (371)
T ss_dssp HHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS--SHHHHHHHHHHHT-EEEEESTTTCHHHHHHHHTTTEEEEE--GT
T ss_pred HHHhhhhcCCceeEeeecccccccceEEEeecCC--CHHHHHHHHhhcC-EEEeccCcccHHHHHHhCCCCEEEEec-cC
Confidence 99999999999998763 2567889988653 3578899999887 4444322111 26999975 79
Q ss_pred CCCHHHHHHH
Q psy3048 331 ETNQCDVAFA 340 (367)
Q Consensus 331 ~~~~edid~l 340 (367)
+||++|||+|
T Consensus 362 ~nt~~dv~~l 371 (371)
T PF00266_consen 362 YNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHH
T ss_pred CCCHHHHhhC
Confidence 9999999986
No 31
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=4.3e-25 Score=211.32 Aligned_cols=248 Identities=16% Similarity=0.151 Sum_probs=179.7
Q ss_pred ceEEEecCCcchhHHHHHH---hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~---~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|++++.+|.++..... ..|++++.++.++++.+|+++|++++++++ .++++++++|++|.+.|+++|+
T Consensus 88 g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t------~lv~v~~~~n~tG~~~~l~~I~ 161 (364)
T PLN02651 88 KKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDT------ALVSVMAVNNEIGVIQPVEEIG 161 (364)
T ss_pred CCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCc------EEEEEECCCCCceecccHHHHH
Confidence 4578889999999766543 468999999988889999999999997765 4889999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||++|++++||++|+.+.++.+... . .+|++++++||| ++|+|+|+++++++. ..+ ..+.+.... .
T Consensus 162 ~~~~~~g~~~~vD~a~~~g~~~~~~~~---~---~~D~~~~s~hK~-~gp~G~g~l~v~~~~-~~~---l~p~~~g~~-~ 229 (364)
T PLN02651 162 ELCREKKVLFHTDAAQAVGKIPVDVDD---L---GVDLMSISGHKI-YGPKGVGALYVRRRP-RVR---LEPLMSGGG-Q 229 (364)
T ss_pred HHHHHcCCEEEEEcchhhCCcccCccc---C---CCCEEEechhhh-CCCCceEEEEEcCCC-CCC---CCccccCCC-c
Confidence 999999999999999998876554211 2 359999999998 689999999998643 211 111111111 0
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.. ...+|+. +....+++.++++.+.. +.+++.++..++++++.
T Consensus 230 -----~~---------------------~~~~GT~----------~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 230 -----ER---------------------GRRSGTE----------NTPLVVGLGAACELAMK-EMDYDEKHMKALRERLL 272 (364)
T ss_pred -----cC---------------------CccCCCc----------cHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 00 0011110 11224667777777654 45888999999999999
Q ss_pred HHhcC-CCCeEEeCC--CC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--------------------CCe
Q psy3048 267 DLVEK-DDRFELVCP--PS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------------------QGR 320 (367)
Q Consensus 267 ~~L~~-~~g~~~~~~--~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------------~~~ 320 (367)
+.|++ ++|++++.+ +. .++++|.+++. ...++.++|.+ +.+..+.. ...
T Consensus 273 ~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~ 347 (364)
T PLN02651 273 NGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV--EGESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAH 347 (364)
T ss_pred HHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC--CHHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhC
Confidence 99985 689999875 22 45888888642 35678888854 44432211 013
Q ss_pred eEEEEEecCCCCCHHHHH
Q psy3048 321 PFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid 338 (367)
+.+|+|+ +++||++|||
T Consensus 348 ~~vR~S~-~~~~t~~did 364 (364)
T PLN02651 348 GSLRLGV-GRFTTEEEVD 364 (364)
T ss_pred ceEEEEc-CCCCCHHHcC
Confidence 6899976 7899999985
No 32
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=6.4e-25 Score=216.67 Aligned_cols=292 Identities=18% Similarity=0.127 Sum_probs=196.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl~~I~~l 108 (367)
+..|++++..|.+....+...|++++.++++.++.+|+++|++++++++ .+|++++++ ++|.+ +|+++|+++
T Consensus 161 ~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl~eI~~~ 233 (481)
T PRK04366 161 RTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNILEIAEI 233 (481)
T ss_pred CCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHHHHHHHH
Confidence 4578888999999999999999999999998789999999999997766 367778876 79988 599999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-----ceeEEEecchhhhhhccCCcccccc
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-----CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-----~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
||++|++++||+|+..+.+.. ... +--.+|++++++||||++|.| +|++++++. .... +. +..+..
T Consensus 234 a~~~gal~iVD~a~~~~~~g~--~~~---~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~-lp--~~~v~~ 304 (481)
T PRK04366 234 VHEAGGLLYYDGANLNAILGK--ARP---GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LAPF-LP--VPVVEK 304 (481)
T ss_pred HHHcCCEEEEEecChhhhccc--CCc---cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hHhh-CC--CCeeec
Confidence 999999999999997543311 111 112469999999999997755 457777643 2222 11 111111
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. .. .|.+. +. ++ +.++......+....+++.|..+..+|.+|++++.++...+++
T Consensus 305 ~-----g~--~~~l~-------------~~---r~--~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~ 359 (481)
T PRK04366 305 D-----GD--RYRLD-------------YD---RP--KSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNAN 359 (481)
T ss_pred c-----CC--ceeec-------------cc---cc--ccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 11000 00 00 0000000000111334677888899999999999999999999
Q ss_pred HHHHHhcCCCCeEEeC-CCCceeEEEEEcC---CchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELVC-PPSMGLVCFRLKG---DNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~---~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid 338 (367)
|++++|+++ +++.. .+.++.+.|.... .+....++.++|.++|+....... ......+|+++ +.++|++|||
T Consensus 360 ~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~-~e~~t~edid 436 (481)
T PRK04366 360 YLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEP-TETESKETLD 436 (481)
T ss_pred HHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcc-cCCCCHHHHH
Confidence 999999987 33332 2344455554321 112467899999999954221111 01245899976 5788999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCcccccC
Q psy3048 339 FAWNEISHQSSEMNLPRGSSSVAKRNS 365 (367)
Q Consensus 339 ~li~~l~~~~~~~~~~~~~~~~~~~~~ 365 (367)
+++++|+++.+++..+...-..|+|+.
T Consensus 437 ~l~~~l~~i~~~~~~~~~~~~~~p~~~ 463 (481)
T PRK04366 437 AFIAAMKQIAEEAKENPELVKEAPHNT 463 (481)
T ss_pred HHHHHHHHHHHHHHhCcHhHhhCCCCC
Confidence 999999999998877655445555554
No 33
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.93 E-value=1.7e-24 Score=207.83 Aligned_cols=272 Identities=15% Similarity=0.117 Sum_probs=189.7
Q ss_pred CceEEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+.-.|++++.+|++.. ..++..|++++.|+.++++.+|+++|++++.+.+ .+|++++++|++|.+.|+++
T Consensus 87 ~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~~~tG~~~~~~~ 160 (373)
T cd06453 87 PGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERT------KLVAVTHVSNVLGTINPVKE 160 (373)
T ss_pred CCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCc------eEEEEeCcccccCCcCCHHH
Confidence 3456778889999853 3455789999999998889999999999997644 58889999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|.++|+++|+++++|++|+.+..+.+. ... .+|++++++|||++. +|+|+++.++ ..+... .++....
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~---~~d~~~~s~~K~~~~-~g~g~~~~~~-~~~~~~----~~~~~g~ 228 (373)
T cd06453 161 IGEIAHEAGVPVLVDGAQSAGHMPVDV---QDL---GCDFLAFSGHKMLGP-TGIGVLYGKE-ELLEEM----PPYGGGG 228 (373)
T ss_pred HHHHHHHcCCEEEEEhhhhcCceeeec---ccc---CCCEEEeccccccCC-CCcEEEEEch-HHhhcC----CCeecCC
Confidence 999999999999999999866553221 111 359999999999887 7899888854 333221 1111111
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
... ....+....| ...+ ..+.....+....++++.+++.+..+|++++.++..+++++
T Consensus 229 ~~~---~~~~~~~~~~----~~~~---------------~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~ 286 (373)
T cd06453 229 EMI---EEVSFEETTY----ADLP---------------HKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAY 286 (373)
T ss_pred Ccc---cccccccccc----CCCc---------------cccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 000 0000000000 0000 11111111122356778888888888999999999999999
Q ss_pred HHHHhcCCCCeEEeCCC--CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCC
Q psy3048 265 FADLVEKDDRFELVCPP--SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETN 333 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~ 333 (367)
+.+.|+++++++++.++ ..++++|.+++ ....++.++|.++|+. +.++.. ....++|+++ ++++|
T Consensus 287 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~-i~~g~~~~~~~~~~~~~~~~iRis~-~~~~t 362 (373)
T cd06453 287 ALERLSEIPGVRVYGDAEDRAGVVSFNLEG--IHPHDVATILDQYGIA-VRAGHHCAQPLMRRLGVPGTVRASF-GLYNT 362 (373)
T ss_pred HHHHHhcCCCeEEeCCccccCCeEEEEECC--cCHHHHHHHHHHCCEE-eccCccchhHHHHHhCCCCeEEEEe-cCCCC
Confidence 99999999999987542 45677887754 2356888999888853 432221 1246899976 68899
Q ss_pred HHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEI 344 (367)
Q Consensus 334 ~edid~li~~l 344 (367)
++|+|+++++|
T Consensus 363 ~~di~~~~~~l 373 (373)
T cd06453 363 EEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHhhC
Confidence 99999999864
No 34
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.93 E-value=3.4e-24 Score=207.76 Aligned_cols=263 Identities=15% Similarity=0.204 Sum_probs=181.6
Q ss_pred CceEEEecCCcchhHHHHHH---hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 29 SRLVAYASDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~---~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
++-.|+++..+|.++..++. ..|++++.|++++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 91 ~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~------~lv~v~~~~n~tG~~~~~~~I 164 (402)
T TIGR02006 91 KGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDT------ILVSIMHVNNEIGVIQDIAAI 164 (402)
T ss_pred CCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCC------EEEEEECCCcCceecccHHHH
Confidence 34578888999999877654 359999999998889999999999987654 588999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
.++||++|++++||++|+.+..+.+.. . ..+|++++++||++ +|+|+|+++++++.... ..+ ....+.
T Consensus 165 ~~l~~~~g~~livD~a~a~g~~~~~~~-----~-~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~~----~~~-~~~g~~ 232 (402)
T TIGR02006 165 GEICRERKVFFHVDAAQSVGKIPINVN-----E-LKVDLMSISGHKIY-GPKGIGALYVRRKPRVR----LEA-LIHGGG 232 (402)
T ss_pred HHHHHHcCCEEEEEcchhcCCcccCcc-----c-cCCCEEEEehhhhc-CCCceEEEEEccCCCCC----CCc-eecCCC
Confidence 999999999999999998876654321 1 14599999999965 69999999998643221 011 111110
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. ...+ .+|+ ......+++..+++.+ .++++++.++..++++++
T Consensus 233 ~-----~~~~---------------------~~gt----------~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 233 H-----ERGM---------------------RSGT----------LPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred c-----cCCc---------------------cCCC----------ccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 0 0000 0011 0111234555666654 357888889999999999
Q ss_pred HHHhcCCCCeEEeCCC--Cc-e--eEEEEEcCCchHHHHHHHHHhc----cCcEEEEEeEE--------------CCeeE
Q psy3048 266 ADLVEKDDRFELVCPP--SM-G--LVCFRLKGDNDLTNQLYERLMS----HKQIYIIKASF--------------QGRPF 322 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~--~~-~--~v~f~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~--------------~~~~~ 322 (367)
.+.|++++++.+..++ .. + .++|... . .+++...|.. .|.. +.+... ...++
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~--~--~~~~~~~l~~i~v~~G~~-c~~~~~~~~~~l~~lg~~~~~~~~~ 350 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYV--E--GESLIMALKDLAVSSGSA-CTSASLEPSYVLRALGINDELAHSS 350 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCc--C--HHHHHHhcCCEEEechhh-cCCCCCCccHHHHHcCCChhhcCce
Confidence 9999999999887532 22 2 3455421 1 3345544421 1111 111100 11368
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+|+|+ +++||++|||+++++|+++.++++
T Consensus 351 vR~S~-~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 351 IRFTI-GRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred EEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99976 788999999999999999988764
No 35
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=4.6e-24 Score=206.61 Aligned_cols=281 Identities=14% Similarity=0.050 Sum_probs=196.8
Q ss_pred eEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
-.|++++..|++. ...++..|++++.++.+.+..+|+++|++++++.+. ..+.+|++++++|+||.+.|+++|.++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~--~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTN--HKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcC--CCccEEEEEeecccccccCCHHHHHHH
Confidence 3566677889775 566777899999999876667899999999986320 013588999999999999999999999
Q ss_pred --HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC--CccccccC
Q psy3048 109 --CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT--DRVYLKHT 184 (367)
Q Consensus 109 --~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~--~~~yl~~~ 184 (367)
||++|++++||++|+.+..+.+... . .+|++++++|||+++|+|+|+++++++ .+++.... .+.|+...
T Consensus 163 ~~~~~~g~~~vvD~v~s~g~~~id~~~---~---~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~ 235 (401)
T PLN02409 163 LDCAQHPALLLVDGVSSIGALDFRMDE---W---GVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWA 235 (401)
T ss_pred HhhhccCcEEEEEcccccCCccccccc---c---CccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHH
Confidence 9999999999999987665443211 1 359999999999999999999998644 33332111 11111100
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. +.. +.+.+.. ..++ .+....+++..+++.+...|++++.+++.+++++
T Consensus 236 ~--------------~~~--------~~~~g~~------~~~T---p~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~ 284 (401)
T PLN02409 236 D--------------YLK--------FYKLGTY------WPYT---PSIQLLYGLRAALDLIFEEGLENVIARHARLGEA 284 (401)
T ss_pred H--------------HHH--------HHhcCCC------CCCC---ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 0 000 0000000 0011 1111235677788888888999999999999999
Q ss_pred HHHHhcCCCCeEEeCCC---Cc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPP---SM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~---~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~ 339 (367)
+++.|+++ |++++.++ .+ .+++|+++. .....++.+.|.++..+.+.++... ....+||+ ++++++.+|+.+
T Consensus 285 l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~-~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig-~~g~~~~~~~~~ 361 (401)
T PLN02409 285 TRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPE-GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIG-HLGNVNELQLLG 361 (401)
T ss_pred HHHHHHHc-CCeeccCChhhcccceEEEeCCC-CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEc-CCCCCCHHHHHH
Confidence 99999887 89987642 24 445676653 2234678877776655666655433 34689995 567999999999
Q ss_pred HHHHHHHHHHHhhCC
Q psy3048 340 AWNEISHQSSEMNLP 354 (367)
Q Consensus 340 li~~l~~~~~~~~~~ 354 (367)
++++|++++.++...
T Consensus 362 ~~~~~~~~l~~~g~~ 376 (401)
T PLN02409 362 ALAGVEMVLKDVGYP 376 (401)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999998876533
No 36
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=4.2e-24 Score=206.84 Aligned_cols=258 Identities=14% Similarity=0.067 Sum_probs=179.7
Q ss_pred ceEEEecCCcchhHH----HHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVE----KSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
.-.|++++.+|++.. ..++..|++++.+++++ ++.+|+++|++++++.+ .+|++++++|++|.+.|+++
T Consensus 104 gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~------~lv~i~~~~n~tG~~~~~~~ 177 (397)
T TIGR01976 104 GDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRT------RLVAVTAASNTLGSIVDLAA 177 (397)
T ss_pred CCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCc------eEEEEeCCCCCCCccCCHHH
Confidence 446778888998864 44567899999999875 68999999999997655 48999999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|+++||+||+++++|++|+.+..+.+..+ . .+|++++++|||++ | ++|+++++++ .+.........+....
T Consensus 178 i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~---~~d~~~~s~~K~~g-~-~~G~l~~~~~-~~~~l~~~~~~~~~~~ 248 (397)
T TIGR01976 178 ITELVHAAGALVVVDAVHYAPHGLIDVQA---T---GADFLTCSAYKFFG-P-HMGILWGRPE-LLMNLPPYKLTFSYDT 248 (397)
T ss_pred HHHHHHHcCCEEEEehhhhccccCCCHHH---c---CCCEEEEechhhcC-C-ceEEEEEcHH-HHhhCCCccccCccCC
Confidence 99999999999999999976544332111 1 35999999999984 4 4888888543 3322211111111110
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHH--------------
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLK-------------- 249 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~-------------- 249 (367)
.. .. ++.+ ++. ...+++.++++.+...
T Consensus 249 ~~----------------------~~-~~~g---------------t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~ 290 (397)
T TIGR01976 249 GP----------------------ER-FELG---------------TPQYELLAGVVAAVDYLAGLGESANGSRRERLVA 290 (397)
T ss_pred Cc----------------------ch-hcCC---------------CCCHHHHHHHHHHHHHHHHhCcccccchhhhhhH
Confidence 00 00 0111 111 1224455556555333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC----CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EE-------
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCP----PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SF------- 317 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~------- 317 (367)
+++++.++..+++++++++|+++++++++.+ +..+++.|.+.+ ....++.++|.++|+. +... ..
T Consensus 291 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~ 367 (397)
T TIGR01976 291 SFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG--LPPQRVVRRLADQGID-AWAGHFYAVRLLRR 367 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC--cCHHHHHHHHHHCCeE-EEeCccchHHHHHH
Confidence 3677888899999999999999888998764 256788887754 2356899999988854 4322 11
Q ss_pred ----CCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 318 ----QGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 318 ----~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
.+..++|+|+ ++++|++|+++++++|
T Consensus 368 ~~~~~~~~~iRis~-~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 368 LGLNDEGGVVRVGL-AHYNTAEEVDRLLEAL 397 (397)
T ss_pred hCCCCCCCeEEEEe-eccCCHHHHHHHHHhC
Confidence 1345899976 6789999999999874
No 37
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.93 E-value=3.1e-24 Score=222.81 Aligned_cols=285 Identities=15% Similarity=0.076 Sum_probs=197.7
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|.+|+++.++|.+....+...|++++.|+++++|.+|+++|++++++.+++ ..+|++++++|..|..+|+++|+++
T Consensus 615 ~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~---ta~V~vt~pSn~gg~e~~I~eI~~i 691 (993)
T PLN02414 615 HRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDN---LAALMVTYPSTHGVYEEGIDEICDI 691 (993)
T ss_pred CCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCC---eEEEEEECCCccccccchHHHHHHH
Confidence 4668999999999999999999999999999889999999999999864321 2589999999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-----ceeEEEecchhhhhhccCCcccccc
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-----CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-----~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
||++|+.++||+|+..+...... . +--.+|++++++||||++|.| +|+++++.. +...+ |+..-.
T Consensus 692 ah~~Galv~vDgAq~~a~~~l~~--p---~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~l---Pg~~v~ 761 (993)
T PLN02414 692 IHDNGGQVYMDGANMNAQVGLTS--P---GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL---PSHPVV 761 (993)
T ss_pred HHHcCCEEEEEecCHHhccCcCC--c---cccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcccC---CCCccc
Confidence 99999999999999765532211 1 111459999999999997654 899988642 22111 111100
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. . ..+ + + + . .+.+.+. .+. ...+....+...|+.++.+|.+|+.+..++...+++
T Consensus 762 ~-~------~~~-~-~----------r-~--~~s~iGt--~~~-a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAn 816 (993)
T PLN02414 762 P-T------GGI-P-R----------P-E--KTQPLGT--ISA-APWGSALILPISYTYIAMMGSEGLTDASKIAILNAN 816 (993)
T ss_pred c-C------CCc-c-c----------c-c--CCCCcCC--ccc-hhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHH
Confidence 0 0 000 0 0 0 0 0000000 000 000111233566788888999999999999999999
Q ss_pred HHHHHhcCCCCeEEeCC--CCceeEEEEEcCC----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 264 KFADLVEKDDRFELVCP--PSMGLVCFRLKGD----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
|++++|++..++....+ +.++...+.+... .....++.++|.+.|..... ..+...+.+|+++ +.+++++|+
T Consensus 817 Yl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt-~~~pv~~~lmiep-TE~~skeel 894 (993)
T PLN02414 817 YMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEP-TESESKAEL 894 (993)
T ss_pred HHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEee-eccccCCEEEEEe-eeeCCHHHH
Confidence 99999987544443333 3445555554421 12347899999988854333 2244567899976 578899999
Q ss_pred HHHHHHHHHHHHHhhC
Q psy3048 338 AFAWNEISHQSSEMNL 353 (367)
Q Consensus 338 d~li~~l~~~~~~~~~ 353 (367)
|+|+++|+.+.+++..
T Consensus 895 Drf~~al~~i~~e~~~ 910 (993)
T PLN02414 895 DRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888764
No 38
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=3.5e-24 Score=204.36 Aligned_cols=272 Identities=15% Similarity=0.072 Sum_probs=187.1
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|+++..+|++ +...++..|++++.++.++++.+|++++++.+++ ++ .+|++++++|++|.+.|+++|.
T Consensus 74 g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~------~~v~i~~~~~~~G~~~~~~~i~ 147 (356)
T cd06451 74 GDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDI------KAVTLTHNETSTGVLNPLEGIG 147 (356)
T ss_pred CCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCC------CEEEEeccCCCcccccCHHHHH
Confidence 3456666678887 4566778899999999887789999999999976 43 4888889999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhcc--CCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFF--TDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~--~~~~yl~~~ 184 (367)
++|+++|+++++|++|+.+..+.+... . .+|+++.++|||+++|.|+|+++.+++ ....... ....+....
T Consensus 148 ~~a~~~~~~li~D~~~~~g~~~~~~~~---~---~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~ 220 (356)
T cd06451 148 ALAKKHDALLIVDAVSSLGGEPFRMDE---W---GVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDL 220 (356)
T ss_pred HHHHhcCCEEEEeeehhccCccccccc---c---CccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecH
Confidence 999999999999999876544322111 1 359999999999999999999998653 3332211 000110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. .+.. +.. ..+....+..+ ...++.++++.+...|++++.++..++++
T Consensus 221 ~-------------~~~~--------~~~----------~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~ 269 (356)
T cd06451 221 L-------------LLLK--------YWG----------EGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAK 269 (356)
T ss_pred H-------------HHHh--------hhc----------ccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 0 0000 000 00000011111 13455677777778889999999999999
Q ss_pred HHHHHhcCCCCeEEeCCC--CceeE-EEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPP--SMGLV-CFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~--~~~~v-~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|.++ |+++..++ ..+.+ +++++. .....++.+.|.++ |+ .+.++. ...+.++|+++ +++++++|++
T Consensus 270 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~~gI-~~~~g~~~~~~~~iRis~-~~~~~~e~v~ 345 (356)
T cd06451 270 ALREGLEAL-GLKLLAKPELRSPTVTAVLVPE-GVDGDEVVRRLMKRYNI-EIAGGLGPTAGKVFRIGH-MGEATREDVL 345 (356)
T ss_pred HHHHHHHHc-CCeeccCcccCCCceEEEECCC-CCCHHHHHHHHHHhCCE-EEecccccccCCEEEEec-CCCCCHHHHH
Confidence 999999987 88887543 23444 344443 23356899999988 74 444332 22345999976 6778999999
Q ss_pred HHHHHHHHHHH
Q psy3048 339 FAWNEISHQSS 349 (367)
Q Consensus 339 ~li~~l~~~~~ 349 (367)
+++++|+++++
T Consensus 346 ~~~~~l~~~~~ 356 (356)
T cd06451 346 GVLSALEEALK 356 (356)
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 39
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=1.8e-23 Score=200.07 Aligned_cols=276 Identities=13% Similarity=0.069 Sum_probs=189.0
Q ss_pred CceEEEecCCcchh-HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 29 SRLVAYASDQSNSS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 29 ~~~~v~~s~~~H~s-~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
++.+|+++...|.+ +...++..|++++.++.++++.+|++++++++++.++ ..++.+++++|++|.+.|+++|++
T Consensus 78 ~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~i~~I~~ 153 (363)
T TIGR02326 78 DGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPA----ITHIALVHCETTTGILNPIEAVAK 153 (363)
T ss_pred CCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCC----ccEEEEEeecCCccccCcHHHHHH
Confidence 35566666666655 3566778899999999988899999999999976432 246888899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcc-ccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRV-YLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~-yl~~~~~ 186 (367)
+||+||++++||++|+.+..+.+... . .+|++++++|||+++|+|+|+++++.+ .+.+......+ ++...
T Consensus 154 l~~~~g~~livD~~~~~g~~~~~~~~---~---~~D~~~~s~~K~l~~p~G~G~l~~~~~-~~~~~~~~~~~~~~~~~-- 224 (363)
T TIGR02326 154 LAHRHGKVTIVDAMSSFGGIPIDIAE---L---HIDYLISSANKCIQGVPGFGFVIARQA-ELAACKGNARSLSLDLY-- 224 (363)
T ss_pred HHHHcCCEEEEEccccccCcccchhh---c---CccEEEecCccccccCCcceEEEECHH-HHHHhhcCCCceeecHH--
Confidence 99999999999999987655433211 1 359999999999999999999999654 23322111111 10000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l 265 (367)
..|.. . ...++. ..|+. +.....++..+++.+..+ |++++.++..++++++
T Consensus 225 -----------~~~~~---------~--~~~~~~---~~ft~---~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l 276 (363)
T TIGR02326 225 -----------DQWRC---------M--EDNHGK---WRFTS---PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTL 276 (363)
T ss_pred -----------HHHHH---------H--hccCCC---CCCCC---cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 00000 0 000000 11221 112345666777776565 5888999999999999
Q ss_pred HHHhcCCCCeEEeCCC--Ccee-EEEEEcCC-chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPP--SMGL-VCFRLKGD-NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~--~~~~-v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li 341 (367)
++.|+++ |++++.++ ..+. ++|.+++. .....++.+.|.++|+ .+.++...+..++|++. +.+++.+|+++++
T Consensus 277 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi-~v~~g~~~~~~~iRi~~-~~~~~~edv~~~l 353 (363)
T TIGR02326 277 VAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGF-VIYPGKVSQVDCFRIGN-IGEVDAADITRLL 353 (363)
T ss_pred HHHHHHc-CCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCE-EEECCcCCCCCEEEEec-CCCCCHHHHHHHH
Confidence 9999887 88876543 3443 46766542 1234678889988885 44444323346899964 4678999999999
Q ss_pred HHHHHHH
Q psy3048 342 NEISHQS 348 (367)
Q Consensus 342 ~~l~~~~ 348 (367)
++|++++
T Consensus 354 ~~l~~~l 360 (363)
T TIGR02326 354 TAIGKAM 360 (363)
T ss_pred HHHHHHh
Confidence 9998875
No 40
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=6.7e-23 Score=197.70 Aligned_cols=270 Identities=14% Similarity=0.100 Sum_probs=184.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec--CCCCCcCHHHHHHHHHHHhh-CCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLA-KGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~~~~d~~~L~~~l~~~~~-~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|++...+++..|++++.+++ ++++.+|+++|++++++..+ .+..+.+|+++++++++|.+.|+++|+
T Consensus 102 gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~ 181 (387)
T PRK09331 102 GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVA 181 (387)
T ss_pred CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHH
Confidence 456788899999999999999999999998 66789999999999976421 122357899999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||+||++++||++|+.+.++.+... .+ +|++++++|||+++|+|+|++++++ +.+........+|.....
T Consensus 182 ~la~~~g~~livD~a~~~g~~~~~~~~---~g---~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~~- 253 (387)
T PRK09331 182 KVAHEYGIPFLLNGAYTVGRMPVDGKK---LG---ADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKEV- 253 (387)
T ss_pred HHHHHcCCEEEEECCcccCCcCCCHHH---cC---CCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCcccce-
Confidence 999999999999999998766543221 23 4999999999999999999988854 334332222222211100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.+ +... .....+..+.+++..+. +.+ +..++..+++++++
T Consensus 254 -------~~------------------------------~~~~-~~~~~~~~~~aal~~~~-~~~-~~~~~~~~~~~~l~ 293 (387)
T PRK09331 254 -------EL------------------------------LGCT-LRGAPLVTLMASFPHVV-ERV-KRWDEEVKKARWFV 293 (387)
T ss_pred -------ee------------------------------ecee-cCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHH
Confidence 00 0000 00011233344444322 112 34566788999999
Q ss_pred HHhcCCCCeEEeCC--CCceeEEEEEcCC-------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 267 DLVEKDDRFELVCP--PSMGLVCFRLKGD-------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 267 ~~L~~~~g~~~~~~--~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
+.|++++|++++.+ ...+++.+..+.. .....++.+.|.++|+... ......++|+. + ...+++|+
T Consensus 294 ~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~~~~i~ri~-~-~g~t~~di 368 (387)
T PRK09331 294 DELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI---KPGATKEFKLS-T-YGLTWEQV 368 (387)
T ss_pred HHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE---ccCCceEEEEE-e-ccCCHHHH
Confidence 99999999999853 2445566654421 1112468888988885311 11233467773 3 33589999
Q ss_pred HHHHHHHHHHHHHhh
Q psy3048 338 AFAWNEISHQSSEMN 352 (367)
Q Consensus 338 d~li~~l~~~~~~~~ 352 (367)
++++++|+++.++..
T Consensus 369 ~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 369 EYVADAFKEIAEKYG 383 (387)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999988654
No 41
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.1e-23 Score=195.21 Aligned_cols=282 Identities=16% Similarity=0.110 Sum_probs=203.5
Q ss_pred eEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
-.|++..++-++ |.+.++..|++++.+..+.+-.+|+++++++++++.. ...|.++|+.|+||+.+|+++|+++
T Consensus 81 dkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~ 156 (383)
T COG0075 81 DKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKA 156 (383)
T ss_pred CeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHH
Confidence 344445566666 6777888999999999998999999999999985542 3589999999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC-c-cccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD-R-VYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~-~yl~~~~~ 186 (367)
||+||+.++||+.-+.+....+..+ .|+ |+++.+++|++++|+|.|++.++++. ++...... + .|+.-
T Consensus 157 ~k~~g~l~iVDaVsS~Gg~~~~vd~---wgi---Dv~itgSQK~l~~PPGla~v~~S~~a-~e~~~~~~~~~~ylDL--- 226 (383)
T COG0075 157 AKEHGALLIVDAVSSLGGEPLKVDE---WGI---DVAITGSQKALGAPPGLAFVAVSERA-LEAIEERKHPSFYLDL--- 226 (383)
T ss_pred HHHcCCEEEEEecccCCCcccchhh---cCc---cEEEecCchhccCCCccceeEECHHH-HHHHhcCCCCceeecH---
Confidence 9999999999997665544433222 366 99999999999999999999997653 33322222 2 23211
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..|...+-. .+. ..++... ...+++..+|+.+..+|++++++|++.++++++
T Consensus 227 -----------~~~~~~~~~-----------~~~---~p~Tppv---~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r 278 (383)
T COG0075 227 -----------KKWLKYMEK-----------KGS---TPYTPPV---NLIYALREALDLILEEGLEARIARHRRLAEALR 278 (383)
T ss_pred -----------HHHHHHHhh-----------cCC---CCCCCCH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 122111000 000 1222211 234788899999999999999999999999999
Q ss_pred HHhcCCCCeEEeCCC--Cc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPP--SM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~--~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.+..+ |++++.++ .+ ++.++.++. ....+++...+.+++.+.+.++... ....+||. +..+.+.+|+...+.
T Consensus 279 ~~~~al-Gl~~~~~~~~~s~tvta~~~P~-g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIG-hMG~~~~~dv~~~l~ 355 (383)
T COG0075 279 AGLEAL-GLELFADPERRSPTVTAIKVPE-GVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIG-HMGNVRPEDVLAALA 355 (383)
T ss_pred HHHHHc-CCccccCcccCCCceEEEECCC-CCCcHHHHHHHHHhCCEEecccccccCccEEEEe-cCccCCHHHHHHHHH
Confidence 999998 99988733 33 455666654 2223445557777766666544322 23589995 456899999999999
Q ss_pred HHHHHHHHhhCCCCC
Q psy3048 343 EISHQSSEMNLPRGS 357 (367)
Q Consensus 343 ~l~~~~~~~~~~~~~ 357 (367)
+|+.++.++..+...
T Consensus 356 ale~~L~~~g~~~~~ 370 (383)
T COG0075 356 ALEAALRELGVKVEA 370 (383)
T ss_pred HHHHHHHHcCCcccc
Confidence 999999988765443
No 42
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=1.2e-22 Score=195.53 Aligned_cols=263 Identities=14% Similarity=0.166 Sum_probs=183.7
Q ss_pred ceEEEecCCcchhHHHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-+|+++..+|.++.... +..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.
T Consensus 88 g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~------~lv~~~~~~n~tG~~~~~~~I~ 161 (381)
T PRK02948 88 KKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDT------VLASIQHANSEIGTIQPIAEIG 161 (381)
T ss_pred CCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCC------EEEEEECCcCCcEeehhHHHHH
Confidence 457888899999976654 4579999999998889999999999987654 5899999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|+++|+++++|++|+.+..+.+. .. ..+|+++.++||++ +|+|+|++++++...... . ......
T Consensus 162 ~l~~~~~~~vivD~~~~~g~~~~~~-----~~-~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~------~-~~~~~~ 227 (381)
T PRK02948 162 ALLKKYNVLFHSDCVQTFGKLPIDV-----FE-MGIDSLSVSAHKIY-GPKGVGAVYINPQVRWKP------V-FPGTTH 227 (381)
T ss_pred HHHHHcCCEEEEEChhhccccccCc-----cc-CCCCEEEecHHhcC-CCCcEEEEEEcCCCCCCC------c-ccCCCC
Confidence 9999999999999998776543321 11 13599999999975 599999999865421110 0 000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
...+ .++ + ......+++.++++... ++++++.++..++++++.
T Consensus 228 -----~~~~---------------------~~~-------t---~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~ 270 (381)
T PRK02948 228 -----EKGF---------------------RPG-------T---VNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFL 270 (381)
T ss_pred -----CCCc---------------------CCC-------C---ccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 0000 000 0 01112345555565542 467888899999999999
Q ss_pred HHhcCCCCeEEeC--CC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--------------------CCee
Q psy3048 267 DLVEKDDRFELVC--PP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------------------QGRP 321 (367)
Q Consensus 267 ~~L~~~~g~~~~~--~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------------~~~~ 321 (367)
+.|+++ |+++.. ++ ...++.|.+++.+ ..++...|.++|+ .+..+.. ....
T Consensus 271 ~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~~gI-~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~ 346 (381)
T PRK02948 271 EQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE--GQYTMLECNRRGI-AISTGSACQVGKQEPSKTMLAIGKTYEEAKQ 346 (381)
T ss_pred HHHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC--HHHHHHhcccCCE-EEEchHhcCCCCCCCCHHHHHcCCChHHhCc
Confidence 999987 554432 11 1346677765422 4667778877774 4442221 1136
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
++|+|+ +.++|++|+|+++++|+++++++.+.
T Consensus 347 ~lRis~-~~~~t~~di~~l~~~l~~~~~~~~~~ 378 (381)
T PRK02948 347 FVRFSF-GQQTTKDQIDTTIHALETIGNQFYRG 378 (381)
T ss_pred eEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 899976 68999999999999999998876554
No 43
>PRK14012 cysteine desulfurase; Provisional
Probab=99.91 E-value=1.6e-22 Score=196.20 Aligned_cols=263 Identities=16% Similarity=0.151 Sum_probs=178.4
Q ss_pred ceEEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|.+...++.. .|++++.++.++++.+|+++|++++++++ .+|++++++|++|.+.|+++|.
T Consensus 94 gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~ 167 (404)
T PRK14012 94 GKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDT------ILVSIMHVNNEIGVIQDIAAIG 167 (404)
T ss_pred CCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCC------EEEEEECcCCCccchhhHHHHH
Confidence 34677888999998766543 59999999998889999999999997765 4899999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||++|+++++|++|+.+..+.+.. . ..+|++++++||++ +|.|+|++++++.... + ..+.+...+..
T Consensus 168 ~la~~~g~~vivD~a~~~g~~~~~~~-----~-~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~-~---~~~~~~g~~~~ 236 (404)
T PRK14012 168 EICRERGIIFHVDAAQSVGKVPIDLS-----K-LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV-R---LEAQMHGGGHE 236 (404)
T ss_pred HHHHHcCCEEEEEcchhcCCcccCcc-----c-CCCCEEEEehhhcc-CCCceEEEEEecCCCC-C---CCceecCCCcc
Confidence 99999999999999998876643311 1 14699999999954 6889999999765322 1 11111111100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..+ ..|+ ......+++.+++... ..++.++.++..++++++.
T Consensus 237 ------~~~---------------------~~gt----------~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~ 278 (404)
T PRK14012 237 ------RGM---------------------RSGT----------LPTHQIVGMGEAARIA-KEEMATENERIRALRDRLW 278 (404)
T ss_pred ------CCc---------------------cCCC----------cCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 000 0000 0001123444555543 3456778889999999999
Q ss_pred HHhcCCCCeEEeCCC-----CceeEEEEEcCCchHHHHHHHHHhccCc---EEEEEeE--------------ECCeeEEE
Q psy3048 267 DLVEKDDRFELVCPP-----SMGLVCFRLKGDNDLTNQLYERLMSHKQ---IYIIKAS--------------FQGRPFLR 324 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~l~~~L~~~g~---~~~~~~~--------------~~~~~~lR 324 (367)
+.|++++++.+..++ ....++|.+.+ ..++...|...++ ..+.+.. ......+|
T Consensus 279 ~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 354 (404)
T PRK14012 279 NGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE----GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIR 354 (404)
T ss_pred HHHhcCCCEEEeCCccccCCCEEEEEEeCcC----HHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEE
Confidence 999999998876431 22235555432 2355555532210 0011110 01236899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+++ ++++|++|+|+++++|++++++++
T Consensus 355 ls~-~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 355 FSL-GRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred EEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 965 788999999999999999988764
No 44
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=3.1e-22 Score=191.87 Aligned_cols=277 Identities=14% Similarity=0.099 Sum_probs=186.3
Q ss_pred ceEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 30 RLVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+.+++.+ ..++.. ...++..|++++.++.++++.+|++++++++++.++ ..+|.+++++|++|.+.|+++|.+
T Consensus 81 ~~vlv~~-~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~~~~i~~ 155 (368)
T PRK13479 81 GKVLVPD-NGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPR----ITHVALVHCETTTGILNPLDEIAA 155 (368)
T ss_pred CeEEEEe-CCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCC----CcEEEEEcccCccccccCHHHHHH
Confidence 4445444 455554 467788999999999987788999999999875432 247889999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+||++|+++++|++|+.+..+.+. ... .+|++++++|||+++|+|+|+++++.+ .++.......++...
T Consensus 156 l~~~~~~~livDa~~~~g~~~~~~-----~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~---- 224 (368)
T PRK13479 156 VAKRHGKRLIVDAMSSFGAIPIDI-----AEL-GIDALISSANKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLD---- 224 (368)
T ss_pred HHHHcCCEEEEEcccccCCccccc-----ccc-CceEEEecCccccccCCCceEEEECHH-HHHHhhcCCCCeeec----
Confidence 999999999999988765443221 111 359999999999999999999998643 333221111111000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~ 266 (367)
+ ...| . ...+.+. ..++. .....+++.++++.+..+ ++++..++..++++++.
T Consensus 225 -------~-~~~~-~-----------~~~~~~~---~~~t~---~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~ 278 (368)
T PRK13479 225 -------L-YDQW-A-----------YMEKTGQ---WRFTP---PTHVVAAFYQALLELEEEGGVPARGARYANNQRTLV 278 (368)
T ss_pred -------H-HHHH-h-----------hhcccCC---CCCCC---cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 0 0000 0 0000000 11111 112335666777766555 48888899999999999
Q ss_pred HHhcCCCCeEEeCCC--Cc-eeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPP--SM-GLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~--~~-~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|+++ |++++.++ .. .+++|.++... ....++.+.|.++|++ +.+.......++|++. ..+++++|++++++
T Consensus 279 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~-v~~g~~~~~~~iRis~-~~~~t~edi~~~l~ 355 (368)
T PRK13479 279 AGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFV-IYPGKLTQVDTFRIGC-IGDVDAADIRRLVA 355 (368)
T ss_pred HHHHHc-CCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEE-EecCCCCCCCEEEEec-CCCCCHHHHHHHHH
Confidence 999988 88876543 22 34667665321 2356899999999854 4333222245899964 46889999999999
Q ss_pred HHHHHHHHh
Q psy3048 343 EISHQSSEM 351 (367)
Q Consensus 343 ~l~~~~~~~ 351 (367)
+|+++++++
T Consensus 356 ~L~~~l~~~ 364 (368)
T PRK13479 356 AIAEALYWM 364 (368)
T ss_pred HHHHHHHHc
Confidence 999998765
No 45
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.91 E-value=2.3e-22 Score=205.38 Aligned_cols=296 Identities=14% Similarity=0.048 Sum_probs=196.7
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
.++++.|.|...+ |...|-+|+++...|.+....+...|++++.|+++++|.+|+++|++++++..
T Consensus 574 A~Lmair~yh~~~-----------Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~--- 639 (954)
T PRK12566 574 AGLLAIRRYHRSR-----------GQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAG--- 639 (954)
T ss_pred HHHHHHHHHHHhc-----------CCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccC---
Confidence 4667777766655 22347788899999988877788899999999998889999999999997321
Q ss_pred CccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCccee
Q psy3048 82 LIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSA 161 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~ 161 (367)
....+|+++++++..+..+|+++|+++||++|+++++|+|+.......... +--.+|++++++||||+.|.|.|+
T Consensus 640 ~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P-----g~~GADi~~~s~HKtf~~P~G~GG 714 (954)
T PRK12566 640 DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP-----ADIGADVSHMNLHKTFCIPHGGGG 714 (954)
T ss_pred CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh-----hhcCCCEEEecCCcccCcCccCCC
Confidence 113578889887765555779999999999999999999997544433210 112469999999999999999999
Q ss_pred EEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHH
Q psy3048 162 MWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLW 240 (367)
Q Consensus 162 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (367)
.++..-...+. -.+|+.....- +.... ..+.|+. ...+.. ...+...|
T Consensus 715 P~vG~iav~~~----L~pfLp~~P~~--d~~G~--------------------~~r~ga~-----S~~~~gsa~~l~~A~ 763 (954)
T PRK12566 715 PGMGPIGVRAH----LAPFVANHPVV--PVEGP--------------------DPNNGAV-----SAAPWGSASILPISW 763 (954)
T ss_pred Cccchhhhhhh----hhhhccCCCCc--CCCCC--------------------CCCCCce-----eecccchHHHHHHHH
Confidence 88854111110 01222211000 00000 0000110 001111 11245667
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC---CCceeEEEEEc---CC-chHHHHHHHHHhccCcEEEE
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP---PSMGLVCFRLK---GD-NDLTNQLYERLMSHKQIYII 313 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~---~~~~~v~f~~~---~~-~~~~~~l~~~L~~~g~~~~~ 313 (367)
..++.+|.+ +.+..+....+++|+.++|.+..++.. .+ +.++...+++. .. .....++.++|.+.|.....
T Consensus 764 ~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt 841 (954)
T PRK12566 764 MYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT 841 (954)
T ss_pred HHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeE
Confidence 778888888 777777778999999999987433322 22 22343333332 11 12346899999988854333
Q ss_pred EeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 314 KASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 314 ~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..+...+.+|+++ +.+++++|||+|+++|+.+.+++
T Consensus 842 -~~fPv~~~LmIep-TE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 842 -MSFPVPGTLMVEP-TESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred -EeeccCCEEEEEe-eeeCCHHHHHHHHHHHHHHHHHH
Confidence 3444567899976 67889999999999999998885
No 46
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=6.3e-22 Score=188.49 Aligned_cols=274 Identities=14% Similarity=0.111 Sum_probs=183.6
Q ss_pred ceEEEecCCcchh-HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s-~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+.+|+.+...|.+ +...++..|++++.++.++++.+|++++++++++.++ ..++++++++|++|.+.|+++|.++
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPD----ITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCC----ceEEEEEecCCcccchhHHHHHHHH
Confidence 4556555555443 4566778999999999877789999999999976432 3577788899999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|++||+++++|++++.+..+.+ .... .+|++++++|||+++|+|+|+++++++ .++.......++...
T Consensus 151 ~~~~~~~livD~~~s~g~~~~~---~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~----- 218 (355)
T TIGR03301 151 ARSHGAVLIVDAMSSFGAIPID---IEEL---DVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNARSLYLD----- 218 (355)
T ss_pred HHHcCCEEEEEeccccCCcccc---hhhc---CccEEEecCCcccccCCceeEEEECHH-HHHHhhCCCCCceee-----
Confidence 9999999999998876544322 1111 359999999999999999999998653 333321111111100
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~~ 267 (367)
+ ...| .. . .+.+. ..++ .......++..+++.+..+| +++..++.+++++++.+
T Consensus 219 ------~-~~~~-~~--------~---~~~~~---~~~t---~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~ 273 (355)
T TIGR03301 219 ------L-YDQW-AY--------M---EKTGK---WRFT---PPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVD 273 (355)
T ss_pred ------H-HHHH-HH--------h---hhcCC---CCCC---CcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 0 0000 00 0 00000 0111 01112345566777776666 88889999999999999
Q ss_pred HhcCCCCeEEeCCC--Cce-eEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPP--SMG-LVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~--~~~-~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ |++++.++ ..+ +++|+++.. .....++.++|.++|+ .+.++......++|+++ +.+++++|++++++.
T Consensus 274 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~i~~~~~~~~~~iRis~-~~~~~~~~i~~~~~~ 350 (355)
T TIGR03301 274 GLRAL-GFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGF-VIYPGKLTLADTFRIGT-IGEIDAADIERLLEA 350 (355)
T ss_pred HHHHc-CCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCE-EEECCccccccEEEEec-CCCCCHHHHHHHHHH
Confidence 99887 88876543 223 456666531 1234688899998885 44443322236899965 577899999999999
Q ss_pred HHHH
Q psy3048 344 ISHQ 347 (367)
Q Consensus 344 l~~~ 347 (367)
|+++
T Consensus 351 l~~~ 354 (355)
T TIGR03301 351 IKDA 354 (355)
T ss_pred HHhh
Confidence 9875
No 47
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=1.4e-22 Score=196.16 Aligned_cols=280 Identities=14% Similarity=0.068 Sum_probs=180.3
Q ss_pred ceEEEecCCcchhHHHHHHhCC----cceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh-hh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD----VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL-EE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g----~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl-~~ 104 (367)
.-+|++++..|.+...++...| ++++.+++++++.+|+++|++++.+++ .+|++++++ ++|.+.|+ ++
T Consensus 108 gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~ 180 (398)
T cd00613 108 RNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKE 180 (398)
T ss_pred CCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHH
Confidence 3467778999999988888776 899999987778899999999986655 477788875 78999885 99
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-----CcceeEEEecchhhhhhccCCcc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-----HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
|+++|++||+++++|++|+.+....+... . .+|++++++|||+ .| +++|++++++ ..... +. +.
T Consensus 181 i~~la~~~g~~livD~~~~~~~~~~~~~~---~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~-~~~~~-~~--~~ 249 (398)
T cd00613 181 IADIAHSAGALVYVDGDNLNLTGLKPPGE---Y---GADIVVGNLQKTG-VPHGGGGPGAGFFAVKK-ELVRF-LP--GR 249 (398)
T ss_pred HHHHHHhcCCEEEEEeccccccCCCChHH---c---CCCEEEeeccccC-CCCCCCCCceeEEEEhh-hhHhh-CC--CC
Confidence 99999999999999999876554332211 1 3599999999999 55 5677888754 22321 11 11
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
........ .....+.. .+.. .....++ + .++ . .+..+........++.+..++.+|++++.++..
T Consensus 250 ~~~~~~~~--~~~~~~~~-~~~~--~~~~~r~-e----~~~----~-~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~ 314 (398)
T cd00613 250 LVGVTKDA--EGNRAFRL-ALQT--REQHIRR-E----KAT----S-NICTGQALLALMAAMYIVYLGPEGLKEIAERAH 314 (398)
T ss_pred eecccccc--CCCcceEE-eccc--chhhccc-c----ccc----c-cceecHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 11000000 00000000 0000 0000000 0 000 0 000111122344555667778889999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid 338 (367)
++++++.++|+++++..+...+....++|+++.. .....++.++|.++|+. +....+.+...+|+++ +.++|++|||
T Consensus 315 ~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~-~~~~~~~~~~~lRis~-~~~~t~edid 392 (398)
T cd00613 315 LNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFH-APTMYLPVDGTLMIEP-TETETKEELD 392 (398)
T ss_pred HHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCcc-ccccccCCCCeEEEEc-CCCCCHHHHH
Confidence 9999999999998655422223445667776531 23467899999988854 3222223457899975 7899999999
Q ss_pred HHHHHH
Q psy3048 339 FAWNEI 344 (367)
Q Consensus 339 ~li~~l 344 (367)
+++++|
T Consensus 393 ~~~~~L 398 (398)
T cd00613 393 ALLEAL 398 (398)
T ss_pred HHHHhC
Confidence 999864
No 48
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=2.4e-21 Score=185.82 Aligned_cols=267 Identities=13% Similarity=0.119 Sum_probs=179.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhC-CCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAK-GLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~-~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|+++...|++...+++..|++++.++.+ .++.+|+++|++++++.+++ ...+.+|+++++++++|.+.|+++|.
T Consensus 90 gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~ 169 (370)
T TIGR02539 90 GDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVA 169 (370)
T ss_pred CCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHH
Confidence 4567778999999999999999999999986 35889999999999764321 12356888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|++||+++++|+||+.+.+..+... . .+|+++.++|||+..+.++|+++.+ +..++.......+|.....
T Consensus 170 ~la~~~~~~livDea~~~g~~~~~~~~---~---~~di~v~s~sK~~~~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~- 241 (370)
T TIGR02539 170 KVCREKGVPLLLNCAYTVGRMPVSAKE---I---GADFIVGSGHKSMAASGPCGVLGMS-EEWEDIVLRKSRYSPVKEV- 241 (370)
T ss_pred HHHHHcCCeEEEECccccCCcCCCHHH---c---CCCEEEeeCcccccCCCCEEEEEEC-HHHHhhhcccccCCcccee-
Confidence 999999999999999987643322111 1 3599999999999877778888875 3434332222222211100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.+ | + .. .....+..+.+++... .+.++ .+++..+++++++
T Consensus 242 -------~~----~------------------~-------~~--~~~~~~~~~~~al~~~-~~~l~-~~~~~~~~~~~l~ 281 (370)
T TIGR02539 242 -------EL----L------------------G-------CT--SRGAPIVTMMASFPHV-VERVK-RWDEEVKKTRWFV 281 (370)
T ss_pred -------ee----e------------------c-------cc--ccccHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHH
Confidence 00 0 0 00 0001122333333321 22222 2344556678999
Q ss_pred HHhcCCCCeEEeC--CCCceeEEEEEcCC-------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 267 DLVEKDDRFELVC--PPSMGLVCFRLKGD-------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 267 ~~L~~~~g~~~~~--~~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
+.|+++ |++++. ++..+++.++++.. ......+.++|.++|++.+.+ ....++|+++ .. .+++|+
T Consensus 282 ~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~---~~~~~iRis~-~~-~t~e~i 355 (370)
T TIGR02539 282 AELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS---GQTKYFKLSV-YG-LTKEQV 355 (370)
T ss_pred HHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccC---CcceEEEEEe-cC-CCHHHH
Confidence 999997 788753 56778888876421 112346888999998641222 2245899976 33 379999
Q ss_pred HHHHHHHHHHHHH
Q psy3048 338 AFAWNEISHQSSE 350 (367)
Q Consensus 338 d~li~~l~~~~~~ 350 (367)
++++++|+++.++
T Consensus 356 ~~l~~~L~~~~~~ 368 (370)
T TIGR02539 356 EYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 49
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=2.1e-22 Score=193.42 Aligned_cols=267 Identities=15% Similarity=-0.014 Sum_probs=177.2
Q ss_pred CCcchhHHH--HHHhCCc-ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcC
Q psy3048 37 DQSNSSVEK--SAIIGDV-PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYN 113 (367)
Q Consensus 37 ~~~H~s~~~--~~~~~g~-~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~g 113 (367)
...|.+-.. .++..|+ +++.++.+.++.+|+++++. + ..|+++|.+|.+|.+.|+++|++ |++|
T Consensus 98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~-----~------~~V~~~h~~t~tG~~~pi~~I~~--~~~g 164 (378)
T PRK03080 98 WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDF-----D------RDVVFTWNGTTTGVRVPVARWIG--ADRE 164 (378)
T ss_pred eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCC-----C------CCEEEEecCCccceeccchhhcc--ccCC
Confidence 356666333 2355788 99999887777888777442 2 25889999999999999999999 8999
Q ss_pred cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCC
Q psy3048 114 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSP 193 (367)
Q Consensus 114 i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 193 (367)
++++||++|+.+..+.+-. .+|++++++||||++|+|+|+++++++ .+.+......++ ... ...
T Consensus 165 ~~~vVDa~qs~G~~pidv~--------~iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~~p~~~~~---~~~----~~~ 228 (378)
T PRK03080 165 GLTICDATSAAFALPLDWS--------KLDVYTFSWQKVLGGEGGHGMAILSPR-AVERLESYTPAR---PIP----KFF 228 (378)
T ss_pred CeEEEecccccccCCCCHH--------HCcEEEEehhhhCCCCCceEEEEECHH-HHHhhhcccCCC---CCc----hhh
Confidence 9999999999988876532 249999999999999999999999754 333221111000 000 000
Q ss_pred Cchh-hhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhc
Q psy3048 194 DYTV-MNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVE 270 (367)
Q Consensus 194 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L~ 270 (367)
++.. -.+ .+ ..++. + ...+.. ....++.++++.+... |++++.+|++++++++++.|+
T Consensus 229 ~~~~~~~~------~~-~~~~~----~--------t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 289 (378)
T PRK03080 229 RLTKGGKA------IE-NSFKG----Q--------TINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE 289 (378)
T ss_pred eeccchHH------hh-hhhcC----C--------cccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 00 00000 0 001111 1224556788888887 899999999999999999999
Q ss_pred CCCCeEEeCC-C--Cc-eeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 271 KDDRFELVCP-P--SM-GLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 271 ~~~g~~~~~~-~--~~-~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
++++++++.+ + .. .+++|++++.+ ....++..+|.+++++...+........+|+| .+.+++++||++++++|+
T Consensus 290 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis-~~~~~t~~di~~l~~al~ 368 (378)
T PRK03080 290 KTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIW-CGPTVEPADVEALTPWLD 368 (378)
T ss_pred hCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCCCCcEEEe-cCCCCCHHHHHHHHHHHH
Confidence 9977777642 2 23 57888875410 23345666776676432221111124689997 478999999999999999
Q ss_pred HHHHHhh
Q psy3048 346 HQSSEMN 352 (367)
Q Consensus 346 ~~~~~~~ 352 (367)
++++++.
T Consensus 369 ~~~~~~~ 375 (378)
T PRK03080 369 WAFERLK 375 (378)
T ss_pred HHHHHHh
Confidence 9888764
No 50
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=5e-21 Score=183.09 Aligned_cols=266 Identities=13% Similarity=0.128 Sum_probs=176.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCC--CCcCHHHHHHHHHHHhhC-CCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAK-GLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~--~~~d~~~L~~~l~~~~~~-~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|++...+++..|++++.++.+.+ +.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|.
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~ 162 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIA 162 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHH
Confidence 345777889999999889999999999998754 489999999999754321 12356888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||++|+++++|+||+.+.+..+... .+ +|+++.++||++++|.++|+++.++ ..+.+......+| ....
T Consensus 163 ~~~~~~~~~vivD~a~~~g~~~~~~~~---~~---~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~~~-~~~~- 233 (361)
T cd06452 163 KVCHEYGVPLLLNGAYTVGRMPVSGKE---LG---ADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMF-KIKE- 233 (361)
T ss_pred HHHHHcCCeEEEECCcccCCcCCCHHH---cC---CCEEEecCCccccCCCCeEEEEECH-HHHHHHhcccccc-ccce-
Confidence 999999999999999986654332111 12 4999999999999888999888753 3343321111111 0000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..+ +. ...+......+++++... .+.+ +..++..+.++++.
T Consensus 234 ------~~~------------------------------~~-~~~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~ 274 (361)
T cd06452 234 ------VEL------------------------------LG-CTLRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFV 274 (361)
T ss_pred ------eee------------------------------ec-cccCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHH
Confidence 000 00 000001123334444332 2223 34455567789999
Q ss_pred HHhcCCCCeEEeC--CCCceeEEEEEcCC-------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 267 DLVEKDDRFELVC--PPSMGLVCFRLKGD-------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 267 ~~L~~~~g~~~~~--~~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
+.|++++|++++. +...+++.++.... .....++.+.|.++|+. +. ......++|++. ...+++|+
T Consensus 275 ~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~-~~--~~~~~~~~ri~~--~g~~~e~~ 349 (361)
T cd06452 275 AELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIH-GI--KPGLTRYFKLST--YGLTWEQV 349 (361)
T ss_pred HHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCce-EE--cCCCceEEEEEe--cCCCHHHH
Confidence 9999999999874 33556666665421 11123688999888854 21 112234889954 23579999
Q ss_pred HHHHHHHHHHH
Q psy3048 338 AFAWNEISHQS 348 (367)
Q Consensus 338 d~li~~l~~~~ 348 (367)
+.++++|+++.
T Consensus 350 ~~l~~al~~~~ 360 (361)
T cd06452 350 EYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHHHHh
Confidence 99999999764
No 51
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.89 E-value=5.3e-22 Score=191.47 Aligned_cols=261 Identities=17% Similarity=0.197 Sum_probs=173.6
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEec---CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecC-CCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~---~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i~dl~~ 104 (367)
++.+|+ ++.+|+|+.+++.+.|++++.|++ ++++.+|+++|+++|++.+. . .++++++.+ ++.+|..+|+++
T Consensus 151 gd~VI~-p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--k-ai~~Vv~Tp~t~~~g~~ddL~e 226 (444)
T TIGR03531 151 AKYVIW-PRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP--D-NILCVLSTTSCFAPRSPDDIEE 226 (444)
T ss_pred CCEEEE-ECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC--C-CEEEEEEcCCcCCCcchhCHHH
Confidence 355554 557899999999999999999995 35699999999999986431 1 134444443 345568999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCC--CCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRG--LEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~--~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|+++|++||+|+|+|+||+.+........ ..+ .+++|++++++||++..|.++|++++++++.++... ..|..
T Consensus 227 Ia~la~k~gI~lIvDaAyg~~~~~~~~~~--~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~---~~y~g 301 (444)
T TIGR03531 227 IAKICANYDIPHIVNNAYGLQSNKYMELI--NKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEIS---KSYPG 301 (444)
T ss_pred HHHHHHHcCCEEEEECcCcCcChhhhhhh--hccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHH---HhccC
Confidence 99999999999999999986432211110 012 235799999999999999888888887776554321 11111
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. .......+|+.+..+|.+|+++++++..+++
T Consensus 302 ~~-----------------------------------------------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a 334 (444)
T TIGR03531 302 RA-----------------------------------------------SASPSLDVLITLLSLGSKGYLELLKERKEMY 334 (444)
T ss_pred CC-----------------------------------------------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 00 0012356788888999999999999999999
Q ss_pred HHHHHHhcCCC---CeEEeCCCCceeEE--EEEcCC-chHHHHHHHHHhccCc---EEEEEeE---ECC-----------
Q psy3048 263 KKFADLVEKDD---RFELVCPPSMGLVC--FRLKGD-NDLTNQLYERLMSHKQ---IYIIKAS---FQG----------- 319 (367)
Q Consensus 263 ~~l~~~L~~~~---g~~~~~~~~~~~v~--f~~~~~-~~~~~~l~~~L~~~g~---~~~~~~~---~~~----------- 319 (367)
+++.++|+++. |..++..|. |.++ +.+... +.....+-..|..+++ -.+.++. ..+
T Consensus 335 ~~l~~~L~~l~~~~~~~~~~~~~-n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~ 413 (444)
T TIGR03531 335 KYLKELLQKLAERHGERLLDTPE-NPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTS 413 (444)
T ss_pred HHHHHHHHHHHHhhCcEeecCCC-CceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeeccccccc
Confidence 99999998753 566765432 2222 222211 1224466667766552 1121111 011
Q ss_pred ---eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 320 ---RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 320 ---~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
..++-++ +...++++|||.|++.|+++
T Consensus 414 ~~~~~y~~~~-~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 414 NYPCPYITAA-AAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCchhHHHH-HHhCCcHHHHHHHHHHHhhc
Confidence 1133332 34567899999999999875
No 52
>KOG1549|consensus
Probab=99.88 E-value=2.2e-21 Score=181.07 Aligned_cols=264 Identities=16% Similarity=0.118 Sum_probs=172.0
Q ss_pred EEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|++.+.+|.+....++. .|++|+++|+++++..|.+.|++.+++.|+ +|.+.+.+|..|++.|+++|+++
T Consensus 133 ~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~------lv~I~~Vnn~~gv~~Pv~EI~~i 206 (428)
T KOG1549|consen 133 HIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTR------LVSIMHVNNEIGVLQPVKEIVKI 206 (428)
T ss_pred eEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCce------EEEEEecccCccccccHHHHHHH
Confidence 888999999999888765 689999999998899999999999999884 89999999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|+++|+.+|+|+||+.|-...|--+ + .+|++++++|||++.| |+|++|++..... ....+++.+++..+
T Consensus 207 cr~~~v~v~~DaAQavG~i~vDV~e-----l-n~D~~s~s~HK~ygp~-~iGaLYvr~~~~~---~~~~p~~~GGgq~r- 275 (428)
T KOG1549|consen 207 CREEGVQVHVDAAQAVGKIPVDVQE-----L-NADFLSISAHKIYGPP-GIGALYVRRKRPR---LRVEPPLSGGGQER- 275 (428)
T ss_pred hCcCCcEEEeehhhhcCCccccHHH-----c-CchheeeecccccCCC-cceEEEEccCCCc---ccccCcccCCcccc-
Confidence 9999999999999999888765432 2 4599999999998855 5999999862211 12345555444321
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG--LKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~~~~~~~~~~la~~l~ 266 (367)
+.++|+. +. ..++.+-.+.+... ..+.+.+.+ .+...+.
T Consensus 276 --------------------------~~rsGT~---~~-------~~~~~~gsA~e~~~~~~~~~~~~~~---~~~~~ll 316 (428)
T KOG1549|consen 276 --------------------------GLRSGTV---AT-------PLAVGLGSAAEFVNKEMAYDEAIIK---RLSEKLL 316 (428)
T ss_pred --------------------------ccccCCc---Cc-------hhhhhhHHHHHHHHhhcchhHHHHH---HHHHHHH
Confidence 1222221 00 12233444444332 223444433 3555555
Q ss_pred HHhc-CCCCeEEeCCC-----CceeEEEEEcCCchHHHHHHHHHhccCcEEE----EEe---------EECCeeEEEEEe
Q psy3048 267 DLVE-KDDRFELVCPP-----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYI----IKA---------SFQGRPFLRFVV 327 (367)
Q Consensus 267 ~~L~-~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~----~~~---------~~~~~~~lRi~~ 327 (367)
.++. .++++.+.+++ ..-.+.|.+.....+..++.+.-...|.... .++ ....+..+||++
T Consensus 317 ~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~ 396 (428)
T KOG1549|consen 317 MGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISI 396 (428)
T ss_pred HHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEee
Confidence 5553 35555555432 2333334321211111222222222221100 011 112356899976
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 328 TSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 328 ~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
..||+++|++++++.+++.+....
T Consensus 397 -G~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 397 -GRYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred -eeeCcHHHHHHHHHHHHHHHHhcc
Confidence 689999999999999999877643
No 53
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=1.1e-20 Score=180.25 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=162.1
Q ss_pred ceEEEecCCcchhHHHHHH---hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~---~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+.+|+++..+|.++..... ..|++++.++.++++.+|+++|++++++++ .+|++++++|++|.+.|+++|.
T Consensus 88 ~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~------~lv~~~~~~n~tG~~~~~~~I~ 161 (353)
T TIGR03235 88 KKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDT------LLVSIMHVNNETGSIQPIREIA 161 (353)
T ss_pred CCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCC------EEEEEEcccCCceeccCHHHHH
Confidence 3678889999999876643 469999999998889999999999986544 5888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||++|+++++|++|+.+..+.+... ..+|++++++|||+ +|+|+|+++++++.... ....+.+......
T Consensus 162 ~l~~~~~~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~--~~~~~~~~~~~~~ 232 (353)
T TIGR03235 162 EVLEAHEAFFHVDAAQVVGKITVDLSA------DRIDLISCSGHKIY-GPKGIGALVIRKRGKPK--APLKPIMFGGGQE 232 (353)
T ss_pred HHHHHcCCEEEEEchhhcCCccccccc------cCCCEEEeehhhcC-CCCceEEEEEccCcccc--cccCceeeCCCCc
Confidence 999999999999999998776544211 14699999999985 69999999997652111 0111211111100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..+ .+|+ ......+++.++++.+ .++.+++.++..+++++++
T Consensus 233 ------~~~---------------------~~gt----------~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~ 274 (353)
T TIGR03235 233 ------RGL---------------------RPGT----------LPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLR 274 (353)
T ss_pred ------Ccc---------------------ccCC----------CChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 000 0000 0112235566667654 4688999999999999999
Q ss_pred HHhcCCCCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEE
Q psy3048 267 DLVEKDDRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYII 313 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~ 313 (367)
+.|++ +|++++.++ ..++++|.+++ ...+++.+.|.+ + +.+.
T Consensus 275 ~~l~~-~g~~~~~~~~~~~~~i~~~~~~~--~~~~~v~~~L~~-~-i~v~ 319 (353)
T TIGR03235 275 DALQT-LGVKLNGDPAETIPHILNFSIDG--VNSEALIVNLRA-D-AAVS 319 (353)
T ss_pred HHhcc-CCeEEeCCcccccCCEEEEEeCC--cCHHHHHHHHhC-C-eEEE
Confidence 99988 799988643 24577887754 235678888864 5 4444
No 54
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=8.6e-21 Score=186.36 Aligned_cols=263 Identities=14% Similarity=0.100 Sum_probs=173.5
Q ss_pred ceEEEecCCcchhHHHHHHh----------CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc
Q psy3048 30 RLVAYASDQSNSSVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF 99 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----------~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i 99 (367)
.-.|++++..|.+....+.. .+.++..++++.+|.+|+++|++++++.. |.+|+++ .+.+|..
T Consensus 124 gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~ 196 (452)
T PTZ00094 124 HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRD 196 (452)
T ss_pred CCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCc
Confidence 45777788899876544321 11344455566679999999999997532 2355443 4569999
Q ss_pred CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcc
Q psy3048 100 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 100 ~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
.|+++|.++||++|++++||++|+.+.+..+.... .+..+|++++++||||.+|.| |++++++. ...........
T Consensus 197 ~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~ 271 (452)
T PTZ00094 197 IDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIENKINE 271 (452)
T ss_pred cCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEecc-cchHHHHhhcc
Confidence 99999999999999999999999998886543221 223569999999999999997 88887643 11110000000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
.++.. + .|+ .......++.++++.+...+.+++.++..
T Consensus 272 ~~~p~----------~----------------------~G~----------~~~~~iaal~~al~~~~~~~~~~~~~~i~ 309 (452)
T PTZ00094 272 AVFPG----------L----------------------QGG----------PHNHQIAAIAVQLKEVQSPEWKEYAKQVL 309 (452)
T ss_pred ccCCC----------C----------------------CCC----------chHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 00000 0 000 00112356667777776678888889999
Q ss_pred HHHHHHHHHhcCCCCeEEeCC---CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EE-----CCeeEEEEEecCC
Q psy3048 260 SLAKKFADLVEKDDRFELVCP---PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SF-----QGRPFLRFVVTSP 330 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~---~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~-----~~~~~lRi~~~~~ 330 (367)
++++++.+.|++. |+++..+ +...++.|... +....++...|.+.|+ ++... .+ ..++.+|+++ +.
T Consensus 310 ~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI-~vs~~~~p~~~~~~~~~~vRis~-~~ 384 (452)
T PTZ00094 310 KNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF--GITGSKMEKLLDAVNI-SVNKNTIPGDKSALNPSGVRLGT-PA 384 (452)
T ss_pred HHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC--CCCHHHHHHHHHHCCc-EEecccCCCCCcCCCCCeEEECC-HH
Confidence 9999999999886 8888753 22334444332 2234577777766674 44321 11 1236899965 55
Q ss_pred CCC----HHHHHHHHHHHHHHHHHh
Q psy3048 331 ETN----QCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 331 ~~~----~edid~li~~l~~~~~~~ 351 (367)
+|+ ++||+++++.|.++++..
T Consensus 385 ~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 385 LTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 665 999999999999998853
No 55
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.87 E-value=4.8e-20 Score=170.25 Aligned_cols=294 Identities=17% Similarity=0.151 Sum_probs=200.2
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
+++|+++|+|-..+ +...|-++++++++|=.....+.+.|.+|+.|+++++|.+|+++|++++.+++
T Consensus 139 ~aGll~Ir~YHe~r-----------G~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~-- 205 (496)
T COG1003 139 YAGLLAIRAYHESR-----------GEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNL-- 205 (496)
T ss_pred hHHHHHHHHHHHHc-----------CCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhccce--
Confidence 57899999998866 22458899999999999999999999999999999999999999999999777
Q ss_pred CCccEEEEEecCCCccccc-CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 81 GLIPCCLVATLGTTGTCAF-DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i-~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
..+.+|+|+| .|++ .+|.+|+++.|++|..++.|||.--..+- ..++-..|. |++-+|.||.|..|.|.
T Consensus 206 ----AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG--~~rPGd~G~---DV~HlNLHKTF~iPHGG 275 (496)
T COG1003 206 ----AALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG--LARPGDMGF---DVVHLNLHKTFCIPHGG 275 (496)
T ss_pred ----eEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhc--ccccccccc---ceEEeecccccccCCCC
Confidence 4888999877 8999 59999999999999999999985321111 111111234 99999999999888554
Q ss_pred e-----eEEEecchhhhhhccCCccccccC----CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccc
Q psy3048 160 S-----AMWVKNANHLTNTFFTDRVYLKHT----DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPL 230 (367)
Q Consensus 160 g-----~l~~~~~~~~~~~~~~~~~yl~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (367)
| -+.++ .++ .+|+... ... ....++ . ...+++.+ ....
T Consensus 276 GGPG~GPvgVk--~~L-------~pfLP~p~~~~~~~--~y~~~~-----------------~-~~~s~g~~----~a~~ 322 (496)
T COG1003 276 GGPGAGPVGVK--AHL-------APFLPGPVVYHDVG--EYRLDY-----------------D-GKKSIGVS----AAPY 322 (496)
T ss_pred CCCCCCceehH--hhc-------cccCCCCcccCCCc--cccccC-----------------C-CCccceee----cccc
Confidence 4 45443 222 2333221 110 001111 0 00001100 0001
Q ss_pred cccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC---CceeEEEEEcCC----chHHHHHHHH
Q psy3048 231 SRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPP---SMGLVCFRLKGD----NDLTNQLYER 303 (367)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~---~~~~v~f~~~~~----~~~~~~l~~~ 303 (367)
+....-...|+.++.+|.+|+++.-+...-+++|+..+|+. .++++..+ ..+...+...+. .....+++++
T Consensus 323 Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKr 400 (496)
T COG1003 323 GSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKR 400 (496)
T ss_pred CcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHH
Confidence 11112255788999999999999999999999999999987 46665433 345555554421 2335689999
Q ss_pred HhccCcEEEEEeEECC---eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 304 LMSHKQIYIIKASFQG---RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 304 L~~~g~~~~~~~~~~~---~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
|++.|.. .|+.... .+.+=|=+ .-.-+++++|+|++++.++.++.....
T Consensus 401 LlD~GfH--aPT~~FPliV~~tLMIEP-TEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 401 LLDYGFH--APTMYFPLIVAGTLMIEP-TESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred HHhcCCC--CCcccCccccccceeecC-CCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999932 3332221 22333322 334568999999999999999876553
No 56
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.87 E-value=9.9e-21 Score=186.09 Aligned_cols=279 Identities=14% Similarity=0.086 Sum_probs=177.4
Q ss_pred CceEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
++..|++++..|.+...+++. .|++++.++++++ .+|+++|++++++++ .+|+++++ |++|.++|+++
T Consensus 153 ~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t------~~v~l~~p-n~tG~v~~l~~ 224 (447)
T PRK00451 153 KRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDT------AAVVVQYP-NFFGVIEDLEE 224 (447)
T ss_pred CCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCe------EEEEEECC-CCCCeeCCHHH
Confidence 345688889999998887664 6999999999877 999999999997665 47788887 88999999999
Q ss_pred HHHHHhhcCcEEEE--ecccccccccChhhhhhhCCCCCcceeeeccccc----cccCCcceeEEEecchhhhhhccCCc
Q psy3048 105 LGPICQEYNIWLHV--DAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKW----LLTNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 105 I~~l~~~~gi~l~v--D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~----l~~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
|+++||++|+|+++ |.. +.+.+..+ +.-.+|++++++||| ..+++|+|+++++. ...... .+
T Consensus 225 I~~~a~~~~~~~iv~~d~~-~~g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~-~~~~~~---~~ 292 (447)
T PRK00451 225 IAEIAHAGGALFIVGVDPV-SLGLLKPP-------GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRK-KLVRQM---PG 292 (447)
T ss_pred HHHHHHHCCCEEEEEcChH-HhccCCCc-------ccCCCCEEEECCCcCCCCCCCCCCCchHHHhhH-HHHhhC---CC
Confidence 99999999999998 543 22222111 112459999999997 23445899988854 223221 11
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccc-cccccc-ccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQ-TPLSRR-FRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
..+...... .....|.+. ...+.....-...+ ..+++. ..+++...+++.++.+|++++.+
T Consensus 293 ~~~g~~~~~--~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 293 RLVGETVDA--DGKRGFVLT---------------LQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred CEeeeeccc--CCCeeeEee---------------ccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 111110000 000001000 00000000000000 001110 11234444566678899999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEE-E--EEeEECCeeEEEEEecCCCCC
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIY-I--IKASFQGRPFLRFVVTSPETN 333 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~-~--~~~~~~~~~~lRi~~~~~~~~ 333 (367)
+..++++++.++|++++|++++..+.+..++++++. ...++.++|.++|++. + .+.......++|+++ +.++|
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~---~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~-~~~~t 431 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPK---PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCV-TEKRT 431 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCC---CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEec-CCCCC
Confidence 999999999999999989988743334444455431 2578999999888542 1 111111135899976 56789
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQS 348 (367)
Q Consensus 334 ~edid~li~~l~~~~ 348 (367)
++|+++++++|++++
T Consensus 432 ~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 432 KEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998763
No 57
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.86 E-value=7.3e-20 Score=172.91 Aligned_cols=259 Identities=19% Similarity=0.135 Sum_probs=189.5
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
++-+|+.++.+|.|+.++++..+++++.++++ |+++||+.+++....+..+++|++....++.|.+.||++|+++
T Consensus 122 ~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L 196 (388)
T COG0156 122 KGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVEL 196 (388)
T ss_pred CCcEEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHH
Confidence 46889999999999999999999999999875 9999999998854322245789999999999999999999999
Q ss_pred HhhcCcEEEEecccccccccCh-hhhhhhCCC--CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLP-EYAHLKRGL--EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
|++||++++||+||+.|.+-.. ..-....|+ +..|+++.+..|.|+ ..|..+..+........+..++|+++..
T Consensus 197 ~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG---s~Gg~v~g~~~~~d~L~~~ar~~ifSta 273 (388)
T COG0156 197 AEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG---SSGGYIAGSAALIDYLRNRARPFIFSTA 273 (388)
T ss_pred HHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc---ccCceeeCcHHHHHHHHHhCCceeccCC
Confidence 9999999999999998876421 111111233 345999999999998 4666666666555544456677776643
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. +. ..+.+...+++.+. ...+..++..++..++
T Consensus 274 l------pP---------------------------------------~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~ 306 (388)
T COG0156 274 L------PP---------------------------------------AVAAAALAALRILE--EGPERRERLQELAAFF 306 (388)
T ss_pred C------CH---------------------------------------HHHHHHHHHHHHHH--hCHHHHHHHHHHHHHH
Confidence 2 00 12234445555443 2345566788888999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeEECCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KASFQGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~~~~~~~lRi~~~~~~~~~edid~li 341 (367)
++.++.. |+.+ .+..++++.+.+.+ +..+.++.+.|.++| +++. |+...+...+|++++ ...|++||++++
T Consensus 307 ~~~~~~~-~~~~-~~s~s~I~pv~~gd-~~~a~~~s~~l~~~G-i~v~~i~~PTVp~gtarlRi~lt-a~ht~~~I~~l~ 381 (388)
T COG0156 307 RSLLKAL-GLVL-LPSESPIIPVILGD-EERALEASRALLEEG-IYVSAIRPPTVPKGTARLRITLT-AAHTEEDIDRLA 381 (388)
T ss_pred HHHHHhc-CCcc-CCCCCCeeeeEeCC-HHHHHHHHHHHHHCC-eeEeeecCCCCCCCcceEEEEec-CCCCHHHHHHHH
Confidence 8666654 5554 34566777666654 566778888999997 4443 566678889999874 566899999999
Q ss_pred HHHHHH
Q psy3048 342 NEISHQ 347 (367)
Q Consensus 342 ~~l~~~ 347 (367)
++|.++
T Consensus 382 ~~l~~~ 387 (388)
T COG0156 382 EALSEV 387 (388)
T ss_pred HHHHhh
Confidence 999875
No 58
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=4e-20 Score=192.81 Aligned_cols=288 Identities=11% Similarity=-0.036 Sum_probs=180.2
Q ss_pred eEEEecCCcchhHHHH---HHhCCcceEEEecC--------CCCCcCH--HHHHHHHHHHh----hCCCccEEEEEecCC
Q psy3048 31 LVAYASDQSNSSVEKS---AIIGDVPVRQLRSD--------DNGVLRG--DALLTAVKEDL----AKGLIPCCLVATLGT 93 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~---~~~~g~~v~~v~~~--------~~~~~d~--~~L~~~l~~~~----~~~~~~~~vv~~~~~ 93 (367)
-.|+++...|.|.... ++..|++++.++++ ..+.+++ ++|++.+.+.. ..+....+|++++.+
T Consensus 123 d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vs 202 (805)
T PLN02724 123 SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSEC 202 (805)
T ss_pred CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccc
Confidence 3566688899886543 33469999999876 3344544 66776542100 011123599999999
Q ss_pred CcccccCChhhHHHHHhhc--------CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEe
Q psy3048 94 TGTCAFDNLEELGPICQEY--------NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVK 165 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~--------gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~ 165 (367)
|.+|.+.|++.|..+++.. +++++||+||+++.++.+..+ + .+|++++++|||+++|.|+|++|++
T Consensus 203 N~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~-----~-~~Dfl~~S~HK~~GgP~G~G~L~vr 276 (805)
T PLN02724 203 NFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSR-----Y-PADFVVVSFYKIFGYPTGLGALLVR 276 (805)
T ss_pred cCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhh-----c-CCCEEEEecceeccCCCCceEEEEe
Confidence 9999999999876655532 367999999999888765322 1 4699999999999999999999998
Q ss_pred cchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH
Q psy3048 166 NANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS 245 (367)
Q Consensus 166 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (367)
++. +.. ..+.+.+.+..........|. ......|+. ++.++. .....+++.++++.
T Consensus 277 ~~~-~~~---l~p~~~GGg~~~~~~~~~~~~-----~~~~~~~~r-fE~GT~--------------n~~~i~~l~aal~~ 332 (805)
T PLN02724 277 RDA-AKL---LKKKYFGGGTVAASIADIDFV-----KRRERVEQR-FEDGTI--------------SFLSIAALRHGFKL 332 (805)
T ss_pred hhh-hhh---hcCCccCCCceEEEeccccee-----eccccHHHH-hcCCCc--------------chhHHHHHHHHHHH
Confidence 642 221 123333332110000000010 000001111 111111 11234667778888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCC------CeEEeCCC--------CceeEEEEEcCCc--hH-HHHHHHHHhccC
Q psy3048 246 YGLKGLQAYLRKHISLAKKFADLVEKDD------RFELVCPP--------SMGLVCFRLKGDN--DL-TNQLYERLMSHK 308 (367)
Q Consensus 246 ~~~~g~~~~~~~~~~la~~l~~~L~~~~------g~~~~~~~--------~~~~v~f~~~~~~--~~-~~~l~~~L~~~g 308 (367)
+...|++++.++..+|++|+.+.|++++ +++++++. ..++++|.+.+.+ .+ ..++...+...|
T Consensus 333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~g 412 (805)
T PLN02724 333 LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSG 412 (805)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcC
Confidence 8777999999999999999999999886 58887642 4689999987532 12 122332223334
Q ss_pred cEE-----EEEeEE-----------------------------C-CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 309 QIY-----IIKASF-----------------------------Q-GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 309 ~~~-----~~~~~~-----------------------------~-~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
+.. |.+... . ..+.+|+|+ .++||.+|||+|+++|++.-.
T Consensus 413 I~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~-g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 413 IQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSF-GYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEc-CccCCHHHHHHHHHHHHHHhh
Confidence 221 111100 0 137899986 689999999999999999644
No 59
>PLN02721 threonine aldolase
Probab=99.86 E-value=5.7e-20 Score=175.01 Aligned_cols=262 Identities=15% Similarity=0.146 Sum_probs=165.4
Q ss_pred ceEEEecCCcchhHHH---HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC-CccEEEEEec-CCCcccccCC---
Q psy3048 30 RLVAYASDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG-LIPCCLVATL-GTTGTCAFDN--- 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~---~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~-~~~~~vv~~~-~~t~~G~i~d--- 101 (367)
.-.|++++.+|+++.+ .+...|++++.++.++++.+|+++|++++++..+.+ ..+.+|+++. +++++|.+.|
T Consensus 80 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~ 159 (353)
T PLN02721 80 GSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEY 159 (353)
T ss_pred CCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHH
Confidence 3457778899998877 466789999999988788999999999997421111 1235677755 4566788755
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
+++|.++|++||+++++|++|..+.......... .....+|++++++||++.+|.| ++++.+++.+..... +
T Consensus 160 l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~-~~~~~~d~~~~s~sK~l~~~~G--~~~~~~~~~~~~~~~-----~ 231 (353)
T PLN02721 160 TDKVGELAKRHGLKLHIDGARIFNASVALGVPVH-RLVKAADSVSVCLSKGLGAPVG--SVIVGSKSFIRKAKR-----L 231 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHH-HHhhhCCEEEEecccccCCcee--eEEecCHHHHHhHHH-----H
Confidence 7899999999999999999985432110000110 0122469999999999987643 444444444332110 0
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
..... ..... . .....+++.. .+...+.+++..++
T Consensus 232 ~~~~~----~~~~~--------------------------------------~-~~~~~~~~~~--l~~~~~~~~~~~~~ 266 (353)
T PLN02721 232 RKTLG----GGMRQ--------------------------------------V-GVLAAAALVA--LQENVPKLEDDHKK 266 (353)
T ss_pred HHhcC----CCeeh--------------------------------------h-HHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 00000 00000 0 0011111111 11112234455677
Q ss_pred HHHHHHHhcCCCCeEE-eCCCCceeEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHH
Q psy3048 262 AKKFADLVEKDDRFEL-VCPPSMGLVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~-~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
++++.+.|++++++++ +.++..+.++++++.. .....+++++|.++|+. +.+ .+..++|+++ +.+++++|+++
T Consensus 267 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~-v~~---~~~~~lR~~~-~~~~~~~~i~~ 341 (353)
T PLN02721 267 AKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL-LMP---GNSSRIRVVT-HHQISDSDVQY 341 (353)
T ss_pred HHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE-Eec---CCCceEEEEe-cCcCCHHHHHH
Confidence 8899999999888876 5566677788887531 12357899999988854 332 2446899976 56789999999
Q ss_pred HHHHHHHHHH
Q psy3048 340 AWNEISHQSS 349 (367)
Q Consensus 340 li~~l~~~~~ 349 (367)
++++|++++.
T Consensus 342 ~~~~l~~~~~ 351 (353)
T PLN02721 342 TLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 60
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.86 E-value=1.2e-19 Score=158.02 Aligned_cols=285 Identities=13% Similarity=0.139 Sum_probs=194.8
Q ss_pred HHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCC-Cc
Q psy3048 7 AKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKG-LI 83 (367)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~-~~ 83 (367)
||..+..-+-+.++ .++ .|..+.++||+.+-+++..|++|.+||.. +.+.++++.+.+.|++.++.+ ..
T Consensus 85 ARe~KfavMhal~~-------~gd-~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~ 156 (382)
T COG1103 85 AREAKFAVMHALCK-------EGD-WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDP 156 (382)
T ss_pred chhhHHHHHHHhcc-------CCC-EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCC
Confidence 45555555444432 234 44558899999999999999999999974 579999999999999888765 66
Q ss_pred cEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEE
Q psy3048 84 PCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMW 163 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~ 163 (367)
|.+.++||+....|.+.|.++|+++|++||+++++.+||..+-++...- .+ .+|+++.|+||.+.+...+|++-
T Consensus 157 ~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~k-----e~-g~DFiVgSGHKsmAAs~PiGvl~ 230 (382)
T COG1103 157 PALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGK-----EI-GADFIVGSGHKSMAASAPIGVLA 230 (382)
T ss_pred ceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccc-----cc-CCCEEEecCccchhccCCeeEEe
Confidence 8899999999999999999999999999999999999999887765321 11 46999999999999988899999
Q ss_pred EecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHH
Q psy3048 164 VKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTL 243 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (367)
++.+. ....+..+..+...... ..+.|..+.. ....+.+++
T Consensus 231 ~~eE~-ae~V~r~Sg~~~~~KEv-----------------------ellGCT~rGa---------------pivTlmASf 271 (382)
T COG1103 231 MSEEW-AEIVLRRSGRAFPKKEV-----------------------ELLGCTVRGA---------------PIVTLMASF 271 (382)
T ss_pred ehhHH-HHHHHhhccccccccee-----------------------eeecccccCc---------------hHHHHHhcC
Confidence 86542 22233223222222211 0233332211 012222222
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-C-CceeEEEEEcCCchHH-------HHHHHHHhccCcEEEEE
Q psy3048 244 RSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-P-SMGLVCFRLKGDNDLT-------NQLYERLMSHKQIYIIK 314 (367)
Q Consensus 244 ~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~-~~~~v~f~~~~~~~~~-------~~l~~~L~~~g~~~~~~ 314 (367)
-.. .+. -+.+....+.++++.++|.++.|+..++. | ..-.+.|..+...+.+ .-+++.|.++|++-+.+
T Consensus 272 P~V-~eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~ 349 (382)
T COG1103 272 PHV-VER-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQP 349 (382)
T ss_pred HHH-HHH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccccc
Confidence 211 222 33455677889999999999988887763 3 4456666554422222 13555666676543332
Q ss_pred eEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 315 ASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 315 ~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+ -..++.+|+ ...++|+++++++++++++++.
T Consensus 350 G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 350 G---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred C---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHhc
Confidence 2 234777754 5678999999999999998863
No 61
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=2.9e-20 Score=179.76 Aligned_cols=256 Identities=15% Similarity=0.046 Sum_probs=172.0
Q ss_pred CCcchhHHHHHHhCC--cceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcC
Q psy3048 37 DQSNSSVEKSAIIGD--VPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYN 113 (367)
Q Consensus 37 ~~~H~s~~~~~~~~g--~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~g 113 (367)
.-.|.+......+.| .+++..+++ +++.+|++++++.+.+.++ .|++++.++. |...|+++|.++|++||
T Consensus 176 ~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~p------lvii~g~S~~-~~~~dl~~i~eia~~~g 248 (493)
T PRK13580 176 SGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKP------LILVAGYSAY-PRRVNFAKLREIADEVG 248 (493)
T ss_pred CCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCC------EEEEeCcccc-CCCcCHHHHHHHHHHcC
Confidence 334555432333333 355556665 4699999999999988763 6777787777 55779999999999999
Q ss_pred cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCC
Q psy3048 114 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSP 193 (367)
Q Consensus 114 i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 193 (367)
++++||+||+.|.+..+...........+|++++++||+|.+|.| |++++++. ..+. +....+|++++..
T Consensus 249 A~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~~~-L~~a~P~i~gg~l------- 318 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YADA-VDKGCPLVLGGPL------- 318 (493)
T ss_pred CEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HHHH-HhhCCCcccCCCc-------
Confidence 999999999998886443221112234679999999999998875 77777543 2322 2222345444321
Q ss_pred CchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3048 194 DYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD 273 (367)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~ 273 (367)
.. ...+...++..+......++.++..+++++|++.|.+.
T Consensus 319 -------------------------------------~p--~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~- 358 (493)
T PRK13580 319 -------------------------------------PH--VMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR- 358 (493)
T ss_pred -------------------------------------cH--HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 00 01222334444433345677889999999999999987
Q ss_pred CeEEeC-CCCceeEEEEEcCCchHH-HHHHHHHhccCcEEEE----EeEECC---eeEEEEEecCC---CCCHHHHHHHH
Q psy3048 274 RFELVC-PPSMGLVCFRLKGDNDLT-NQLYERLMSHKQIYII----KASFQG---RPFLRFVVTSP---ETNQCDVAFAW 341 (367)
Q Consensus 274 g~~~~~-~~~~~~v~f~~~~~~~~~-~~l~~~L~~~g~~~~~----~~~~~~---~~~lRi~~~~~---~~~~edid~li 341 (367)
|+.++. ...++++.+.+.+ ...+ ..+.+.|.+.|+ ++. |+...+ ...||++.+.. ..+++|+++++
T Consensus 359 G~~vv~ggTdshIV~V~lg~-~~~~g~~a~~~L~e~GI-~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~ia 436 (493)
T PRK13580 359 GARLVTGGTDNHLVLIDVTS-FGLTGRQAESALLDAGI-VTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVA 436 (493)
T ss_pred CCCccCCCCCCCEEEEEeCC-HHHHHHHHHHHHHHCCe-EEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHH
Confidence 888764 2467888888865 3333 366678888884 443 344444 66899965321 34699999999
Q ss_pred HHHHHHHHHh
Q psy3048 342 NEISHQSSEM 351 (367)
Q Consensus 342 ~~l~~~~~~~ 351 (367)
+.|.++++..
T Consensus 437 d~l~~~l~~~ 446 (493)
T PRK13580 437 ELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 62
>KOG2862|consensus
Probab=99.85 E-value=2.8e-19 Score=158.51 Aligned_cols=261 Identities=17% Similarity=0.143 Sum_probs=187.3
Q ss_pred HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC-hhhHHHHHhhcCcEEEEeccccc
Q psy3048 46 SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-LEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 46 ~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-l~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
.++-.|++|..|+.+.+....++.+++++.+++ |.+|.++++.++||+..| ++.+.++||+|+++++||+.-+.
T Consensus 110 ~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~-----p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSl 184 (385)
T KOG2862|consen 110 CARRYGAEVDVVEADIGQAVPLEEITEKLSQHK-----PKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASL 184 (385)
T ss_pred HHHhhCceeeEEecCcccCccHHHHHHHHHhcC-----CceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhc
Confidence 345578999999888889999999999998876 689999999999999999 88899999999999999986554
Q ss_pred cc--ccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC----ccccccCCCCCCCCCCCchhh
Q psy3048 125 SA--LLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD----RVYLKHTDAPMNTQSPDYTVM 198 (367)
Q Consensus 125 ~~--~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~~~~~ 198 (367)
+. +.+|+ .++ |+.-..++|.+++|+|.+++.+.+.. .+...... ..|+...
T Consensus 185 ggt~F~mDe-----wgV---DvaytgSQKaL~aP~GLsiisfS~ka-~~~~~~rK~~~~~~yFd~~-------------- 241 (385)
T KOG2862|consen 185 GGTEFEMDE-----WGV---DVAYTGSQKALGAPAGLSIISFSDKA-LEAIRDRKTKPVSFYFDIL-------------- 241 (385)
T ss_pred CCccceehh-----hcc---cEEEecchhhcCCCCCcceeecCHHH-HHHHhhccCCceEEEEeHH--------------
Confidence 43 33333 355 99999999999999999997775543 32221111 1222221
Q ss_pred hhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy3048 199 NWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELV 278 (367)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~ 278 (367)
|.++ +|.|...++. .+++... .....+.++|..+.++|+++.++++++++++++..|+++ |+++.
T Consensus 242 -~~~~-------~wgc~~e~~~---yhhT~pv---~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~f 306 (385)
T KOG2862|consen 242 -RLGN-------FWGCDGEPRA---YHHTPPV---QLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLF 306 (385)
T ss_pred -hhcc-------hhccCCcccc---cccCCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Cccce
Confidence 1111 2344433321 2222221 123677889999999999999999999999999999997 88876
Q ss_pred CC---CCceeE-EEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 279 CP---PSMGLV-CFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 279 ~~---~~~~~v-~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.. +..+.+ +...+. ...-+++..++.+++.+.+.++.- -..-++||.+....-+.+.|+..++.|+..+++
T Consensus 307 v~~e~~rlptvttv~vp~-gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 307 VVDEELRLPTVTTVKVPY-GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ecChhhccCcceeeecCC-CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 42 233333 333332 344678999999998766653321 124589998877777899999999999888765
No 63
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.85 E-value=4.3e-20 Score=175.12 Aligned_cols=244 Identities=13% Similarity=0.010 Sum_probs=164.0
Q ss_pred HHHHHhCCcceEEEecCC----CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 44 EKSAIIGDVPVRQLRSDD----NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 44 ~~~~~~~g~~v~~v~~~~----~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
.+.++..|+ +..+..++ +-.+++++++. +++ +.+|.++|.+|+||+..| ++++.++++++||
T Consensus 96 ~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVD 161 (349)
T TIGR01364 96 AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SED------AAYVHYCANETIHGVEFR-----ELPDVKNAPLVAD 161 (349)
T ss_pred HHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CCC------CCEEEEcCCCCcccEecc-----eecccCCCeEEEE
Confidence 334445677 66666542 23456565552 222 458999999999999876 7777889999999
Q ss_pred cccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhh
Q psy3048 120 AAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMN 199 (367)
Q Consensus 120 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 199 (367)
++++.+..+.+-.+ .|++++++||+++ |+|+|+++++++. +++.....+.|. +|
T Consensus 162 avss~g~~~id~~~--------~d~~~~ssqK~lg-P~Glg~l~~s~~~-~~~~~~~~~~~~------------~~---- 215 (349)
T TIGR01364 162 MSSNILSRPIDVSK--------FGLIYAGAQKNIG-PAGLTVVIVRKDL-LGRASRITPSML------------NY---- 215 (349)
T ss_pred ccccccCccCCHHH--------ccEEEEecccccC-CCceEEEEECHHH-HhhcccCCCCcc------------hH----
Confidence 99998877665322 2799999999986 9999999997643 332211111111 01
Q ss_pred hhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy3048 200 WLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEKDDRFELV 278 (367)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L~~~~g~~~~ 278 (367)
... ......+++ .+-...+++.++|+.+..+ |++++.+++.++++++++.|++++|+...
T Consensus 216 -~~~--------~~~~~~~~T----------p~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~ 276 (349)
T TIGR01364 216 -KIH--------AENDSMYNT----------PPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRN 276 (349)
T ss_pred -HHH--------HhcCCCCCC----------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeecc
Confidence 000 000000011 1112347778889988888 79999999999999999999999887655
Q ss_pred CC-C--Cc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 279 CP-P--SM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 279 ~~-~--~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.. + .+ .+++|.+++. ....++.+.+.++|. +..+... ..+.+|+|+ .++++++|||+|+++|+++.++
T Consensus 277 ~~~~~~rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~-~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 277 PVDPRNRSRMNVVFTLGNE-ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASI-YNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CCCHHHcCCeEEEEecCCh-hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEEC-cCCCCHHHHHHHHHHHHHHHHh
Confidence 32 2 34 5678887652 233567677788886 4432222 235899976 7899999999999999998664
No 64
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.85 E-value=2.3e-20 Score=177.83 Aligned_cols=256 Identities=12% Similarity=-0.005 Sum_probs=168.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHH-HHHHHhhCCCccEEEEEecCCCcccccC-ChhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLT-AVKEDLAKGLIPCCLVATLGTTGTCAFD-NLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~-~l~~~~~~~~~~~~vv~~~~~t~~G~i~-dl~~I~~l 108 (367)
+|..+..+|.. .+.++..|.. ..+..+. .+..+..++++ ++++++ .+|.++|.+|+||+.+ ||++|
T Consensus 96 ~i~~G~fg~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~------~~V~~th~eTstGv~~~~i~~i--- 164 (360)
T PRK05355 96 YVDTGSWSKKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDA------AYVHYTSNETIDGTEFHELPDT--- 164 (360)
T ss_pred EEECCHHHHHH-HHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCC------CEEEEccCCCcceEecCccccc---
Confidence 33333333333 3334445654 5555543 45556556655 665433 5899999999999998 77777
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
||++++||++++.+..+.+-. ..|++++++||+++ |+|+|+++++++. +++.....+.|+....
T Consensus 165 ---~g~l~vVDavss~g~~~idv~--------~~d~~~~ssqK~lg-P~Glg~l~~s~~~-l~~~~~~~~~~~~~~~--- 228 (360)
T PRK05355 165 ---GDVPLVADMSSDILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTIVIVREDL-LGRALPSIPSMLDYKT--- 228 (360)
T ss_pred ---CCCcEEEEcCccccCccCCHH--------HccEEEEecccccc-CCceEEEEECHHH-HhhcccCCChHHHHHH---
Confidence 899999999999887766432 22899999999985 9999999997643 3322110111111100
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~ 267 (367)
+.. ....+++ .+-...+++.++|+.+..+ |++++.+++.++++++++
T Consensus 229 -----------~~~-----------~~~~~~T----------p~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~ 276 (360)
T PRK05355 229 -----------HAD-----------NDSMYNT----------PPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYD 276 (360)
T ss_pred -----------HHh-----------cCCccCC----------CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 000 0000011 1112347788899998888 899999999999999999
Q ss_pred HhcCCCCeEEeCC--CCc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCP--PSM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 268 ~L~~~~g~~~~~~--~~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
.|++++.+..+.+ ..+ .+++|++++. ....++.+.+.++|.+ +.... ...+.+|+|+ .++||++|||+|+++|
T Consensus 277 ~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~-~~~~~-~~~g~vRiS~-~~~nt~eei~~l~~~l 352 (360)
T PRK05355 277 AIDSSDFYRNPVAPEDRSRMNVPFTLADE-ELDKKFLAEAKAAGLV-GLKGH-RSVGGMRASI-YNAMPLEGVQALVDFM 352 (360)
T ss_pred HHHhCCCcccCCChhhcCCcEEEEEcCCh-HHHHHHHHHHHHCCCc-ccCCC-CccCcEEEEC-CCCCCHHHHHHHHHHH
Confidence 9999863333332 234 5688888652 3335676777888865 33222 2246899976 7899999999999999
Q ss_pred HHHHHH
Q psy3048 345 SHQSSE 350 (367)
Q Consensus 345 ~~~~~~ 350 (367)
++++++
T Consensus 353 ~~~~~~ 358 (360)
T PRK05355 353 KEFERR 358 (360)
T ss_pred HHHHHh
Confidence 998764
No 65
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=1.3e-19 Score=172.45 Aligned_cols=262 Identities=14% Similarity=0.118 Sum_probs=170.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+-.|+++..+|.+...++...|++++.++.++ ++.+|+++|++++++.+ .+|++++ ++|.+.|+++|.++
T Consensus 58 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l 128 (352)
T cd00616 58 GDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAI 128 (352)
T ss_pred CCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHH
Confidence 44688899999999999999999999999976 78999999999986544 3566553 58999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeec--cccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFN--AHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|+++|+++++|++|+.+....... + + ...|+.+++ .+||+.+| ..|++++++++...+... +...+..
T Consensus 129 ~~~~~i~li~D~a~~~g~~~~~~~---~-~-~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~----~~~~~~~ 198 (352)
T cd00616 129 AKRHGLPVIEDAAQALGATYKGRK---V-G-TFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARL----LRNHGRD 198 (352)
T ss_pred HHHcCCeEEEECCCCCCCeECCEE---c-c-cCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHH----HHHcCCC
Confidence 999999999999998665432210 0 1 113555555 56999544 346666665444332210 0000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.....+ ........ +....+.+++.....++++++.++.+++++++.
T Consensus 199 ---~~~~~~----------------------------~~~~~~~~--~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~ 245 (352)
T cd00616 199 ---RDRFKY----------------------------EHEILGYN--YRLSEIQAAIGLAQLEKLDEIIARRREIAERYK 245 (352)
T ss_pred ---CCCCcc----------------------------ccceeeec--cCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 000000 00000000 011122333333345677888899999999999
Q ss_pred HHhcCCCCeEEeCCC-----CceeEEEEEcCC-chHHHHHHHHHhccCcEEEE----EeEECC-----------------
Q psy3048 267 DLVEKDDRFELVCPP-----SMGLVCFRLKGD-NDLTNQLYERLMSHKQIYII----KASFQG----------------- 319 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-----~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~----~~~~~~----------------- 319 (367)
+.|++++|++++.++ ...++.|.+++. .....++.+.|.++|+. +. +.....
T Consensus 246 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 324 (352)
T cd00616 246 ELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIE-TRVHYPPLHHQPPYKKLLGYPPGDLPNAE 324 (352)
T ss_pred HHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCC-eeeecCccccCHhhhhccCCCcCCChHHH
Confidence 999999999987643 235677777531 23356889999888852 22 111100
Q ss_pred ---eeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 320 ---RPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 320 ---~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
...+|++ .++++|++||++++++|+
T Consensus 325 ~~~~~~l~l~-~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 325 DLAERVLSLP-LHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHhCeEEcc-CCCCCCHHHHHHHHHHhC
Confidence 2589994 588999999999999874
No 66
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.84 E-value=8.2e-19 Score=169.66 Aligned_cols=262 Identities=14% Similarity=0.091 Sum_probs=172.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|.+...+++..+.+...++ .+|+++|++++++..+.+..+.+|++.+..|++|.+.|+++|+++|+
T Consensus 123 d~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~ 197 (393)
T TIGR01822 123 DAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLAD 197 (393)
T ss_pred CEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHH
Confidence 4677789999999999888887775543 36999999999875332223467888888899999999999999999
Q ss_pred hcCcEEEEecccccccccCh-hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLP-EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+||+++++|++|+.+.+... .......++ ..+|+++.+.||++.++ ..|+++.+ +............+......
T Consensus 198 ~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~~~~~-- 273 (393)
T TIGR01822 198 KYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLFSNSL-- 273 (393)
T ss_pred HcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCccceecCCC--
Confidence 99999999999975543211 000001122 24699999999998765 55877653 33332211111111111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
......++..+++.+ +..++..++..++.+++.+.
T Consensus 274 -------------------------------------------~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~ 308 (393)
T TIGR01822 274 -------------------------------------------PPAVVGASIKVLEML--EASNELRDRLWANTRYFRER 308 (393)
T ss_pred -------------------------------------------CHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHH
Confidence 000112233344332 23566778889999999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
|+++ |+++. ++..+.+.+.+.+ .....++.+.|.++|+ ++.+..+ .+...+|+++ +.+++++||++++++|
T Consensus 309 L~~~-g~~~~-~~~~~~~~i~~~~-~~~~~~l~~~L~~~gI-~v~~~~~~~~~~~~~~iRis~-~~~~t~edi~~~~~~l 383 (393)
T TIGR01822 309 MEAA-GFDIK-PADHPIIPVMLYD-AVLAQRFARRLLEEGI-YVTGFFYPVVPKGQARIRVQI-SAAHTEEQLDRAVEAF 383 (393)
T ss_pred HHHc-CCCCC-CCCCCEEEEEeCC-HHHHHHHHHHHHHCCe-eEeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHH
Confidence 9886 77764 3334555555543 2345789999998884 4443221 2345799976 5778899999999999
Q ss_pred HHHHHHh
Q psy3048 345 SHQSSEM 351 (367)
Q Consensus 345 ~~~~~~~ 351 (367)
+++.+++
T Consensus 384 ~~~~~~~ 390 (393)
T TIGR01822 384 TRIGREL 390 (393)
T ss_pred HHHHHHh
Confidence 9987754
No 67
>PRK07179 hypothetical protein; Provisional
Probab=99.84 E-value=7.6e-19 Score=170.67 Aligned_cols=259 Identities=12% Similarity=0.057 Sum_probs=171.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++...|.+...++...|++++.++. .|+++|++++++.. +.+|++.+++|++|.+.|+++|.++|+
T Consensus 139 ~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~ 208 (407)
T PRK07179 139 TPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAE 208 (407)
T ss_pred CEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHH
Confidence 45777899999999998888888766643 49999999997632 357888889999999999999999999
Q ss_pred hcCcEEEEecccccccccCh-hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLP-EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+||+++++|++|+.+..... ..-....++ ..+|+++.+.||+++. ++|+++.+. +..........++......
T Consensus 209 ~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~-~~~~~~~~~~~~~~~~~t~-- 283 (407)
T PRK07179 209 EFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPR-ELAEYVPFVSYPAIFSSTL-- 283 (407)
T ss_pred HcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCH-HHHHHHHHhCcCeeeCCCC--
Confidence 99999999999986533111 000001122 2469999999999974 477877643 3222111111111111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
. .....++.++++.+. ...+..++..++++++++.
T Consensus 284 ------------------------------------------~-~~~~aa~~aal~~~~--~~~~~~~~l~~~~~~l~~~ 318 (407)
T PRK07179 284 ------------------------------------------L-PHEIAGLEATLEVIE--SADDRRARLHANARFLREG 318 (407)
T ss_pred ------------------------------------------C-HHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 0 001122333444331 2245677889999999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEE---EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIY---IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~---~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
|+++ |+++.. ..+++.+.+.. ......+.+.|.++|++. +.+....+..++|+++ +..+|++|+++++++|+
T Consensus 319 L~~~-g~~v~~--~~~i~~l~~~~-~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~-~~~~t~edi~~~~~~l~ 393 (407)
T PRK07179 319 LSEL-GYNIRS--ESQIIALETGS-ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSL-NADLTASDLDRVLEVCR 393 (407)
T ss_pred HHHc-CCCCCC--CCCEEEEEeCC-HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHH
Confidence 9987 777653 34666666543 234567888898888541 1111222357999976 56788999999999999
Q ss_pred HHHHHhhCC
Q psy3048 346 HQSSEMNLP 354 (367)
Q Consensus 346 ~~~~~~~~~ 354 (367)
+++++....
T Consensus 394 ~~~~~~~~~ 402 (407)
T PRK07179 394 EARDEVDLW 402 (407)
T ss_pred HHHHhhCCC
Confidence 998876544
No 68
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.83 E-value=9.5e-20 Score=173.69 Aligned_cols=257 Identities=12% Similarity=0.006 Sum_probs=163.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCc-C-HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVL-R-GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~-d-~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.+|++....|.+ .+.++..|++++.+++++++.. + ++..+..+++++ .+|+++|.+|.+|... .++
T Consensus 91 ~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~lV~~~h~~t~tG~~~-----~~i 158 (355)
T cd00611 91 DYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDA------AYVHYCSNETIHGVEF-----DEV 158 (355)
T ss_pred EEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCC------CEEEEeCCcccccEEc-----cee
Confidence 344444444433 2344556889999988654333 4 233333344444 4899999999999972 245
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
++.||++++||++++.+..+.+-.+ .|+..+++||++ +|+|+|+++++.+. +.+.....+.+.
T Consensus 159 ~~~~g~~~~VDa~qs~g~~~idv~~--------~~~~~ss~~K~l-GP~G~g~l~~~~~~-~~~~~~~~~~~~------- 221 (355)
T cd00611 159 PDTGGVPLVADMSSNILSRPIDVSK--------FGVIYAGAQKNL-GPAGVTVVIVRKDL-LGKARKITPSML------- 221 (355)
T ss_pred cccCCCeEEEEccccccCCCCCHHH--------hCEEEeeccccc-CCCceEEEEECHHH-HhhcccCCCCcc-------
Confidence 5669999999999999888765322 255556699987 59999999997543 322211111111
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~ 267 (367)
++ .. . .......++ .+-...+++.++++.+..+ |++++.++++++++++++
T Consensus 222 -----~~-----~~----~----~~~~~~~~T----------pn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~ 273 (355)
T cd00611 222 -----NY-----KT----H----ADNNSLYNT----------PPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYD 273 (355)
T ss_pred -----cH-----HH----H----HhcCCCCCC----------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 00 00 0 000000111 1112347788899998888 799999999999999999
Q ss_pred HhcCCCCeE-EeCC--CCc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFE-LVCP--PSM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~-~~~~--~~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++||+. ...+ ... .+++|++++. ....++.+.+.+.|.+ . +..++..+.+|+|+ .++||++|||+|+++
T Consensus 274 ~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~-~l~~~~~~~~~r~G~~-~-~~~~~~~g~vR~S~-~~~nt~edi~~l~~a 349 (355)
T cd00611 274 TIDNSNGFYRGPVDKRARSRMNVPFRLGKE-ELEKEFLKEAEAAGMI-G-LKGHRSVGGIRASI-YNALSLEGVQALADF 349 (355)
T ss_pred HHHhCccccccCCCHHHcCceEEEEEcCCh-hhhHHHHHHHHHCCCc-c-cCCCcccCeEEEEc-cCCCCHHHHHHHHHH
Confidence 999998863 2112 134 4588887652 2334555666778854 3 22222236899976 789999999999999
Q ss_pred HHHHH
Q psy3048 344 ISHQS 348 (367)
Q Consensus 344 l~~~~ 348 (367)
|+++.
T Consensus 350 l~~~~ 354 (355)
T cd00611 350 MKEFQ 354 (355)
T ss_pred HHHHh
Confidence 99863
No 69
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.83 E-value=1.8e-18 Score=165.97 Aligned_cols=260 Identities=13% Similarity=0.045 Sum_probs=166.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|+++...|.|+..+++......+.++ ..|+++|++++++..+......+|+++++++++|.+.|+++|.++|
T Consensus 95 ~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~ 169 (370)
T PRK05937 95 TDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALS 169 (370)
T ss_pred CCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHH
Confidence 45777789999999999887543333333 3589999999986432222235677889999999999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhh-hhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+++|++++||++|+.+.+..+-... ...+....+....+.+|.++ |.|+|+++.++ ..........++.+...
T Consensus 170 ~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~~--- 243 (370)
T PRK05937 170 KKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGAALLSSSE--VKQDLMLNSPPLRYSTG--- 243 (370)
T ss_pred HHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh-cCceEEEcCHH--HHHHHHHhCCCCeecCC---
Confidence 9999999999999876554321000 01122222455667779775 67877766532 11111111112221110
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
.......++.++++.+...+ +...++..++.+++.+.
T Consensus 244 ------------------------------------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~ 280 (370)
T PRK05937 244 ------------------------------------------LPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQK 280 (370)
T ss_pred ------------------------------------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHh
Confidence 00112244556666655555 45667888999999988
Q ss_pred hcCC-CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 269 VEKD-DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 269 L~~~-~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
|... ++. .+.+.+++ ....++.+.|.++|+ ++....+...+++|+++ +.++|++|||+++++|+++
T Consensus 281 l~~~~~~~---------~~~i~~~~--~~~~~~~~~L~~~gi-~v~~~~~~~~~~iRis~-~~~~t~edid~l~~~L~~~ 347 (370)
T PRK05937 281 FSSAAPGC---------VQPIFLPG--ISEQELYSKLVETGI-RVGVVCFPTGPFLRVNL-HAFNTEDEVDILVSVLATY 347 (370)
T ss_pred cCCCCCCC---------EEEEEeCC--hhHHHHHHHHHHCCe-eEEeeCCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHH
Confidence 8653 111 12244443 234678888888884 44432223345899976 7889999999999999999
Q ss_pred HHHhhCCCC
Q psy3048 348 SSEMNLPRG 356 (367)
Q Consensus 348 ~~~~~~~~~ 356 (367)
++++.++..
T Consensus 348 ~~~~~~~~~ 356 (370)
T PRK05937 348 LEKYQKNVV 356 (370)
T ss_pred HHHhCCCcc
Confidence 998876654
No 70
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.83 E-value=5.2e-19 Score=167.50 Aligned_cols=259 Identities=14% Similarity=0.043 Sum_probs=170.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCH--HHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH-
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRG--DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG- 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~--~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~- 106 (367)
.-+|++++.+|.++..+++..|.+++.++.++++..+. +.+++..++. +.+|+++++++++|.+.|++++.
T Consensus 83 g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 83 GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPK------TKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred CCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCcc------ceEEEEECCCCCCCcccCHHHHHH
Confidence 34677889999999999999999999999987776665 5666554443 35888888999999998766555
Q ss_pred --HHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccc
Q psy3048 107 --PICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 107 --~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++|+++|+++++|+||+++........ ....+...+|+++.+.||+++ .+.++|+++.+++....... ....+..
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~-~~~~~~~ 235 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLK-KLLPYTT 235 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHH-HHHHhcc
Confidence 899999999999999987654322110 000112235899999999998 55678888886533333211 0000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
...+......+..+++... +++++..++..+++
T Consensus 236 ----------------------------------------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 268 (350)
T cd00609 236 ----------------------------------------------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRR 268 (350)
T ss_pred ----------------------------------------------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHH
Confidence 0001112233444444332 67888888999999
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEEecCCCCCHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~~edid~l 340 (367)
+++.+.|++++...+..++....+++.+... ...+.+.+.|.+.|+.......+. +..++|++++.. ++|++++
T Consensus 269 ~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~ 344 (350)
T cd00609 269 DALLEALKELGPLVVVKPSGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEA 344 (350)
T ss_pred HHHHHHHHhcCCccccCCCccEEEEEecCCC-ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHH
Confidence 9999999998655433344455666666542 224455666666674332222222 567999977543 9999999
Q ss_pred HHHHHH
Q psy3048 341 WNEISH 346 (367)
Q Consensus 341 i~~l~~ 346 (367)
+++|++
T Consensus 345 ~~al~~ 350 (350)
T cd00609 345 LERLAE 350 (350)
T ss_pred HHHhhC
Confidence 999863
No 71
>KOG1360|consensus
Probab=99.83 E-value=7.4e-19 Score=160.36 Aligned_cols=269 Identities=16% Similarity=0.152 Sum_probs=198.7
Q ss_pred cccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 26 DIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 26 ~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.+.|+.+||.++.+|.|+..+++..+++-..+..+ |+++|+++++...+ ..|++|.+....++.|.+.||++|
T Consensus 253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-----D~~hL~~lL~~~~~--svPKivAFEtVhSM~Gavcpleel 325 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-----DLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEEL 325 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhhhcCCcceeeccC-----CHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHH
Confidence 35689999999999999999999999877777766 99999999987654 358899999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccCh-hhhhhhCC-CCCcceeeeccccccccCCcceeEEEecchhhhhh-ccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP-EYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNT-FFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~-~~~~~~yl~ 182 (367)
++++|+||+..++|+.|+.+.+-.. ..-..-.| +.++|+++...-|.|+. -.-|+.....+... .+..++|++
T Consensus 326 cDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGYIAat~~LvDmiRSyAaGFIF 401 (570)
T KOG1360|consen 326 CDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGYIAATRKLVDMIRSYAAGFIF 401 (570)
T ss_pred HHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccceehhhhhHHHHHHHhcCceEE
Confidence 9999999999999999988766321 00000123 36789999999998864 23344333323333 366677776
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISL 261 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~l 261 (367)
...- +.. . ......+.+.+ ..+| ....+.++..
T Consensus 402 TTSL------PP~--------------------------------------v-l~GAleaVr~lk~~eg-~~lR~~hqrn 435 (570)
T KOG1360|consen 402 TTSL------PPM--------------------------------------V-LAGALEAVRILKSEEG-RVLRRQHQRN 435 (570)
T ss_pred ecCC------ChH--------------------------------------H-HHhHHHHHHHHhhhhh-HHHHHHHHHH
Confidence 5421 110 1 12223344443 3445 4445667888
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeEECCeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
.+|+++.|.++ |+.++.. .+.++-.++.+ ...+.++.+-|+.+..+|+. |+...|...+||++ .++.|++.+
T Consensus 436 v~~~kq~l~~~-GiPVi~~-pSHIiPv~vgd-a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaP-TP~HT~~mm 511 (570)
T KOG1360|consen 436 VKYVKQLLMEL-GIPVIPN-PSHIIPVRVGD-AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAP-TPHHTPQMM 511 (570)
T ss_pred HHHHHHHHHHc-CCcccCC-CcceeeeeccC-HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCC-CCCCCHHHH
Confidence 99999999997 8888754 46777777754 56778999999998888875 56667888999976 566689999
Q ss_pred HHHHHHHHHHHHHhhCCC
Q psy3048 338 AFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 338 d~li~~l~~~~~~~~~~~ 355 (367)
+.|++++..+.+++.-..
T Consensus 512 ~~lv~~l~~vw~~v~l~~ 529 (570)
T KOG1360|consen 512 NILVNALLDVWNEVGLPR 529 (570)
T ss_pred HHHHHHHHHHHHHcCCcc
Confidence 999999999999876554
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.82 E-value=3.1e-18 Score=163.61 Aligned_cols=250 Identities=12% Similarity=0.043 Sum_probs=159.8
Q ss_pred EEEecCCcchhH-----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 32 VAYASDQSNSSV-----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~-----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.|+++. .|+.. ..++...|+++++++. ++.+|++++++++.++++ .++.++++++++|.+.|+++|+
T Consensus 101 eVi~~~-~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~~~~i~ 172 (363)
T TIGR01437 101 EVVLPK-GHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLSVEDAA 172 (363)
T ss_pred eEEEEC-ccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCCHHHHH
Confidence 355554 55543 4566778999999986 356999999999998874 3444667778899999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||+||+++++|+||+... .... .. .+|++++++||++.+|. .|+++. +++.+.... ........
T Consensus 173 ~~a~~~gi~vivD~a~~~~~---~~~~----~~-g~D~~~~S~~K~l~gp~-~G~l~~-~~~~i~~~~----~~~~~~~~ 238 (363)
T TIGR01437 173 QVAQEHNLPLIVDAAAEEDL---QKYY----RL-GADLVIYSGAKAIEGPT-SGLVLG-KKKYIEWVK----LQSKGIGR 238 (363)
T ss_pred HHHHHcCCeEEEECCCCCch---HHHH----Hc-CCCEEEEeCCcccCCCc-eEEEEE-cHHHHHHHH----hccCCCcc
Confidence 99999999999999997211 1100 11 35999999999999887 677665 333333210 00000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.+ +..+ ...+++.+++..+...+.+.+. +..+.++++.
T Consensus 239 -------~~----------------------------~~~~------~~~~gl~aAl~~~~~~~~~~~~-~~~~~~~~l~ 276 (363)
T TIGR01437 239 -------AM----------------------------KVGK------ENILGLTAALEQYLSTGKESGA-EMVAKLTPFI 276 (363)
T ss_pred -------ee----------------------------ccCH------HHHHHHHHHHHHHHccCcccHH-HHHHHHHHHH
Confidence 00 0000 1134555666655443433333 3445677899
Q ss_pred HHhcCCCCeEEeCCC-------CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHH
Q psy3048 267 DLVEKDDRFELVCPP-------SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-------~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
++|++++|+++..++ ....+.|.....+....++.+.|.+.+.-..........+.+|+.+. .++++|+++
T Consensus 277 ~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~--~~~~~e~~~ 354 (363)
T TIGR01437 277 EALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR--SVTGGQLDI 354 (363)
T ss_pred HHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee--cCCHHHHHH
Confidence 999999999887421 12345555422223467899999876632222222334557787653 367999999
Q ss_pred HHHHHHHH
Q psy3048 340 AWNEISHQ 347 (367)
Q Consensus 340 li~~l~~~ 347 (367)
++++|+++
T Consensus 355 ~~~~l~~~ 362 (363)
T TIGR01437 355 IVERIREI 362 (363)
T ss_pred HHHHHHHh
Confidence 99999876
No 73
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.2e-18 Score=155.40 Aligned_cols=246 Identities=18% Similarity=0.207 Sum_probs=182.1
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
.+.+.|+++++++++++ .+|++++.+..||+..|+.+|.+++|++|+++..|-||+++.++.+... ..
T Consensus 151 ~~~~~P~~~~~~~~dd~------AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~------~g 218 (407)
T COG3844 151 EGVIAPRALEEAITDDV------AVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHA------AG 218 (407)
T ss_pred eeeeChHHHHHhhccce------EEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecc------cC
Confidence 35678889999999987 4899999999999999999999999999999999999999999876543 34
Q ss_pred cceeeeccccccccCCcc-eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDC-SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
+|+.++++||+|++.+|. +++|+.+ ...+........+..+... | ..+..++ ..+|.
T Consensus 219 aDfaigcsyKYLNgGPGapa~l~v~~-~h~e~~~~~lsgW~gha~p--------f-----------~m~~~y~--p~~ga 276 (407)
T COG3844 219 ADFAIGCSYKYLNGGPGAPAGLFVAP-RHRERSWPPLSGWWGHARP--------F-----------AMEEVYA--PGPGA 276 (407)
T ss_pred CCeeeeeeceeccCCCCCceeEEecc-ccccccccccccccCCCCc--------c-----------hhhhccC--cCccc
Confidence 599999999999987775 4555543 3333333333344432221 0 0011111 11221
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-C--CeEEeCCC----CceeEEEEEcCC
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-D--RFELVCPP----SMGLVCFRLKGD 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~--g~~~~~~~----~~~~v~f~~~~~ 293 (367)
..|.-....-.++.++-.+|..+..-++.+..++...++.|+.+.++.. + ++++..|. .-..|+|..+.
T Consensus 277 ---~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~- 352 (407)
T COG3844 277 ---RRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH- 352 (407)
T ss_pred ---cceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc-
Confidence 3333333333455666677888888889999999999999999999764 3 67777663 45677887654
Q ss_pred chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
..++++.|+++|++ +.++.+..+|+.++..|++-+||-..++.|+++++...
T Consensus 353 ---~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 353 ---GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ---HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 57899999999954 56677889999988889999999999999999988653
No 74
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=4.5e-18 Score=159.69 Aligned_cols=271 Identities=13% Similarity=0.110 Sum_probs=193.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.=.|+++..++.+..+++...|+++++|++| +.+.||++.||++|.+.+| .|+..| ..|...|+++|.+|
T Consensus 74 GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~dm~~i~~l 144 (374)
T COG0399 74 GDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTK------AIIPVH---LAGQPCDMDAIMAL 144 (374)
T ss_pred CCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCe------EEEEeh---hccCCCCHHHHHHH
Confidence 3477888999999999999999999999998 4599999999999999875 555553 47999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|++||++++.|+||+.|...-++. .-.++.+-+++|.++|.+.+. ..|++++++++..++.. .+...+..
T Consensus 145 a~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~----~lr~hG~~-- 214 (374)
T COG0399 145 AKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKAR----SLRNHGLS-- 214 (374)
T ss_pred HHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHH----HHHHhCcC--
Confidence 999999999999998776543221 122455688999999999987 77888888876655432 11111111
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
....+ +.+....|-+++...+.+++...+.+.++++.++.+++++++.+.
T Consensus 215 --~~~~~----------------------------~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~ 264 (374)
T COG0399 215 --RDAVF----------------------------KYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEA 264 (374)
T ss_pred --CCccc----------------------------cceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 122333445566777888888888899999999999999999999
Q ss_pred hcCCCCeEEeCCCC-----ceeEEEEEcCCchHHHHHHHHHhccCcE---EEEEeEEC--------------------Ce
Q psy3048 269 VEKDDRFELVCPPS-----MGLVCFRLKGDNDLTNQLYERLMSHKQI---YIIKASFQ--------------------GR 320 (367)
Q Consensus 269 L~~~~g~~~~~~~~-----~~~v~f~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~--------------------~~ 320 (367)
|++++++.+..++. ......+++.....-+++.+.|.++|+. +..|.... ..
T Consensus 265 l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~ 344 (374)
T COG0399 265 LKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSE 344 (374)
T ss_pred hhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhh
Confidence 99998766544331 2233334443212335788888888532 22221000 12
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
..+.+ +.++..+++|+++++++|++++.+
T Consensus 345 r~l~L-P~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 345 RILSL-PLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CeEEc-cCCCCCCHHHHHHHHHHHHHHhcc
Confidence 35677 678999999999999999998653
No 75
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.81 E-value=6.4e-18 Score=160.59 Aligned_cols=257 Identities=12% Similarity=0.003 Sum_probs=168.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++..|.+...+++..|++++.++. +|++++++++++.. +...+.++++++++|++|...|+++|+++|+
T Consensus 86 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~ 159 (349)
T cd06454 86 DLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAK 159 (349)
T ss_pred CEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHH
Confidence 35777889999999888889999988753 48899999987643 1123467888888999999999999999999
Q ss_pred hcCcEEEEecccccccccCh-hhhhhhC-CCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLP-EYAHLKR-GLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~-~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
++|+++++|++|+.+.+... ....... .....|+++.++||+++. +| |+++.+ +..+.........+....
T Consensus 160 ~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~-~~~~~~~~~~~~~~~~~~---- 232 (349)
T cd06454 160 KYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS-KELIDYLRSYARGFIFST---- 232 (349)
T ss_pred HcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC-HHHHHHHHHhchhhhccC----
Confidence 99999999999975544211 0000000 122459999999999986 34 555543 333322111111111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
.. .......+.++++.... .++..++..++++++.+.
T Consensus 233 ---~~--------------------------------------~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~ 269 (349)
T cd06454 233 ---SL--------------------------------------PPAVAAAALAALEVLQG--GPERRERLQENVRYLRRG 269 (349)
T ss_pred ---CC--------------------------------------CHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 00 00112344445554322 466778889999999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
|.++ |+++..++......+.... .....++.+.|.++|+ .+.+... .+..++|+++ +.+++++|+++++++|
T Consensus 270 l~~~-g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gI-~~~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l 345 (349)
T cd06454 270 LKEL-GFPVGGSPSHIIPPLIGDD-PAKAVAFSDALLERGI-YVQAIRYPTVPRGTARLRISL-SAAHTKEDIDRLLEAL 345 (349)
T ss_pred HHhc-CCcccCCCCCcEEEEeCCC-hHHHHHHHHHHHhCCc-eEEEecCCccCCCCCeEEEEE-eCCCCHHHHHHHHHHH
Confidence 9886 7776655444444443332 2346789999998875 4433221 1246899976 6778999999999999
Q ss_pred HHH
Q psy3048 345 SHQ 347 (367)
Q Consensus 345 ~~~ 347 (367)
+++
T Consensus 346 ~~~ 348 (349)
T cd06454 346 KEV 348 (349)
T ss_pred HHh
Confidence 875
No 76
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.81 E-value=9e-19 Score=167.13 Aligned_cols=226 Identities=12% Similarity=0.032 Sum_probs=149.1
Q ss_pred cEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEE
Q psy3048 84 PCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMW 163 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~ 163 (367)
+.+|+++|.+|.+|.+.|+++| +|++|++++||++++.+..+.+-. .+|++++++||+++.|+|.++++
T Consensus 129 ~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~--------~~D~~~~s~~K~lg~~~Gl~~~~ 197 (361)
T TIGR01366 129 VDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA--------ETDVYYFAPQKNFASDGGLWLAI 197 (361)
T ss_pred CCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHH--------HCCEEEEEchhhcCCCCceEEEE
Confidence 3589999999999999999998 589999999999999988766531 25999999999999998888877
Q ss_pred EecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHH
Q psy3048 164 VKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMT 242 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (367)
++++ .+++... ....+.. .+.| .+| +..... ....+ ...+.. ...+++..+
T Consensus 198 ~s~~-~~~~~~~----~~~~~~~-----~p~~--~d~-------~~~~~~-~~~~~--------t~~tp~i~~i~~l~~a 249 (361)
T TIGR01366 198 MSPA-ALERIEA----IAASGRW-----VPEF--LSL-------PTAVDN-SLKNQ--------TYNTPAIATLALLAEQ 249 (361)
T ss_pred ECHH-HHhhhhc----ccCCCCC-----Cchh--hhH-------HHHHhc-cccCC--------CCCCchHHHHHHHHHH
Confidence 7653 3332211 0001000 0001 000 000000 00000 001111 123477788
Q ss_pred HHHhhHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-C--Ccee-EEEEEcCCchHHHHHHHHHhccCcEEEEEeE-
Q psy3048 243 LRSYGLK-GLQAYLRKHISLAKKFADLVEKDDRFELVCP-P--SMGL-VCFRLKGDNDLTNQLYERLMSHKQIYIIKAS- 316 (367)
Q Consensus 243 l~~~~~~-g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~--~~~~-v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~- 316 (367)
++.+..+ |++.+.+++.++++++++.|.++++++++.+ + .+.. .++.+.. +....++.+.|.++|+. +.+..
T Consensus 250 l~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~-g~~~~~v~~~L~~~gI~-i~~~~~ 327 (361)
T TIGR01366 250 IDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVD-DIDAATVAKILRANGIV-DTEPYR 327 (361)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCC-ccCHHHHHHHHHHCCCe-eccCcc
Confidence 8888777 6999999999999999999999976776642 2 1222 2333332 34467888899888754 33221
Q ss_pred ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 FQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 ~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.-+...+|++. +.++|.+||++++++|+++++++
T Consensus 328 ~l~~~~vRis~-~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 328 KLGRNQLRVAM-FPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ccCCCcEEEEc-CCCCCHHHHHHHHHHHHHHHhhC
Confidence 11245899965 67999999999999999987753
No 77
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.7e-18 Score=156.61 Aligned_cols=259 Identities=20% Similarity=0.198 Sum_probs=169.5
Q ss_pred cCceEEEecCCcchhHHHHH--Hh-CCcceEEEecCCCCCcCHHHHHHHHHHHh-hCCCccEEEEEecCCCcccccC---
Q psy3048 28 KSRLVAYASDQSNSSVEKSA--II-GDVPVRQLRSDDNGVLRGDALLTAVKEDL-AKGLIPCCLVATLGTTGTCAFD--- 100 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~~--~~-~g~~v~~v~~~~~~~~d~~~L~~~l~~~~-~~~~~~~~vv~~~~~t~~G~i~--- 100 (367)
.+.-.|+|.+.+|...+++. .+ .+...+.+....+|.++++++++++.+.- .+...|.++..+.. |..|.+.
T Consensus 72 ~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~-te~GtVy~l~ 150 (342)
T COG2008 72 QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA-TEGGTVYPLD 150 (342)
T ss_pred CCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc-CCCceecCHH
Confidence 45678999999999988863 33 34555555445789999999999998632 34455666666654 4779985
Q ss_pred ChhhHHHHHhhcCcEEEEeccccc---ccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 101 NLEELGPICQEYNIWLHVDAAYAG---SALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~a~~~---~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
.|++|.++||++|+++|+|||--+ ..+. +..+...+ .+|++++++.|.++.| .|.+++.+.+..++.
T Consensus 151 el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~---~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a---- 220 (342)
T COG2008 151 ELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKS---YVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRA---- 220 (342)
T ss_pred HHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHh---hCCEEEEecccCCcce--eeeEEEcCHHHHHHH----
Confidence 456677789999999999997432 2222 22333333 4599999999999987 456666666655432
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
.|..... |++ + ...++.+.+. +-.+...-+....++
T Consensus 221 -~~~rK~~---------------------------------Ggl------~-~k~r~laA~~---~~~l~~~~~~~~~~H 256 (342)
T COG2008 221 -RRWRKRA---------------------------------GGL------M-RKARFLAAQG---LYALEDDVWRLAADH 256 (342)
T ss_pred -HHHHHHh---------------------------------ccc------H-hhhhHHHHHH---HHHHhccHHHHHHHH
Confidence 1111110 000 0 0011222222 222333345666677
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe-eEEEEEecCCCCCHHH
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR-PFLRFVVTSPETNQCD 336 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~-~~lRi~~~~~~~~~ed 336 (367)
..+++++|.+.+...+|+++..|++.|+|.++++. ...+.|...+..+..+...... ..+|+ ++++-++++|
T Consensus 257 an~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~------~~i~~l~~~~~~~~~~~~~~~~~~~vRf-vts~a~~~ed 329 (342)
T COG2008 257 ANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE------SAIEALRLAGALFYRGVLIGAHGEIVRF-VTSWATSEED 329 (342)
T ss_pred HHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh------HHHHHHHhhchhheeeeeccCCCceEEE-EeeccCCHHH
Confidence 88899999999998899999988999999998863 2225555555433221111222 47999 6789999999
Q ss_pred HHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQS 348 (367)
Q Consensus 337 id~li~~l~~~~ 348 (367)
|++++..++++.
T Consensus 330 v~~~~~~~~~~~ 341 (342)
T COG2008 330 VDELVAAIKALL 341 (342)
T ss_pred HHHHHHHHHHhh
Confidence 999999998763
No 78
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.80 E-value=1.1e-18 Score=165.25 Aligned_cols=255 Identities=17% Similarity=0.126 Sum_probs=161.3
Q ss_pred ceEEEecCCcchhHHH---HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC-CCccEEEEEecCCCcccc---cCCh
Q psy3048 30 RLVAYASDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK-GLIPCCLVATLGTTGTCA---FDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~---~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~-~~~~~~vv~~~~~t~~G~---i~dl 102 (367)
.-.|++++.+|.+... .+...|++++.++.+. +.+|+++|++++++..+. ...+.+|++++++|+ |. .+++
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l 148 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDEL 148 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHH
Confidence 3456678899988654 3455899999999854 789999999999753110 112468888888885 54 3678
Q ss_pred hhHHHHHhhcCcEEEEecccccccc--cChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~--~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
++|+++|++||+++++|+||..+.. ......... ..+|+++.++|||++.|. |.+++.+++...........+
T Consensus 149 ~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~ 223 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALGVALKTYK---SGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA 223 (338)
T ss_pred HHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHH---hcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh
Confidence 8899999999999999999853321 100111111 245999999999998774 334444444333221100000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
.. .+ ....+...+++..+...++.++.++..+
T Consensus 224 --~~---------~~-------------------------------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~ 255 (338)
T cd06502 224 --GG---------GM-------------------------------------RQSGFLAAAGLAALENDLWLRRLRHDHE 255 (338)
T ss_pred --CC---------Ch-------------------------------------hhHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 00 00 0111223333444444456777788889
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh---ccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM---SHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~---~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
+++++.+.|+++ |+.+ .++..+++.++++.......++.+.+. ++|.. +.+. +..++|+++ +.+++++|+
T Consensus 256 ~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~-~~~~---~~~~lRi~~-~~~~~~~~i 328 (338)
T cd06502 256 MARRLAEALEEL-GGLE-SEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVL-FYAW---GEGGVRFVT-HWDTTEEDV 328 (338)
T ss_pred HHHHHHHHHHhc-CCCc-ccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEE-EEec---CCCeEEEEe-ecCCCHHHH
Confidence 999999999987 5543 356678888877543333445555554 56643 3222 226899976 678889999
Q ss_pred HHHHHHHHH
Q psy3048 338 AFAWNEISH 346 (367)
Q Consensus 338 d~li~~l~~ 346 (367)
+++++++++
T Consensus 329 ~~~~~~l~~ 337 (338)
T cd06502 329 DELLSALKA 337 (338)
T ss_pred HHHHHHHhc
Confidence 999999865
No 79
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=2.4e-17 Score=163.05 Aligned_cols=271 Identities=13% Similarity=0.040 Sum_probs=173.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC-------CCccEEEEEecCCCcccccCCh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK-------GLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~-------~~~~~~vv~~~~~t~~G~i~dl 102 (367)
.-.|++++.+|.+...+++..|++++.++.+ |+++|++.+++.... ....++|++....+++|.+.|+
T Consensus 185 Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l 259 (489)
T PLN02483 185 GGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKL 259 (489)
T ss_pred CCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCH
Confidence 3467789999999999999999999999865 678888877643211 1112456666667889999999
Q ss_pred hhHHHHHhhcCcEEEEecccccccccC-hhhhhhhCCC--CCcceeeeccccccccCCcceeEEEecchhhhhhccCCcc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGL--EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
++|+++|++||+++++|++|+.+.+.. ........++ ...|+++.+.+|.++. .| |+++. +++.+.........
T Consensus 260 ~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~G-G~i~~-~~~li~~l~~~~~~ 336 (489)
T PLN02483 260 PEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CG-GYIAG-SKELIQYLKRTCPA 336 (489)
T ss_pred HHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-Cc-eEEEc-CHHHHHHHHHhCcc
Confidence 999999999999999999998543311 0000001111 2459999999999975 34 66554 33333322111111
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-H---HHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-L---KGLQAYL 255 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~g~~~~~ 255 (367)
+..... ... .....+.++++.+. . +...+..
T Consensus 337 ~~~~~~--------------------------------------------~~p-~~~~~~~aaL~~l~~~~g~~~~~~~~ 371 (489)
T PLN02483 337 HLYATS--------------------------------------------MSP-PAVQQVISAIKVILGEDGTNRGAQKL 371 (489)
T ss_pred ccccCC--------------------------------------------cCH-HHHHHHHHHHHHHHhCccccchHHHH
Confidence 111100 000 01112233344321 1 2234556
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCC
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPE 331 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~ 331 (367)
++.+++++++++.|+++ |+.+..+....++.+.+.. .....++.+.|.++|+... +..+ .+...+|+++ +..
T Consensus 372 ~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~-~~~~~~~~~~Ll~~GI~v~-~~~fp~~p~~~~~vRi~i-sa~ 447 (489)
T PLN02483 372 AQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLKQNVAVV-VVGFPATPLLLARARICI-SAS 447 (489)
T ss_pred HHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECC-HHHHHHHHHHHHHCCcEEe-eeCCCCCCCCCceEEEEe-CCC
Confidence 78889999999999998 8877655555565555433 2334578888888885543 3322 2246899976 455
Q ss_pred CCHHHHHHHHHHHHHHHHHhhCCCCC
Q psy3048 332 TNQCDVAFAWNEISHQSSEMNLPRGS 357 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~~~~~~ 357 (367)
.+++|+++++++|+++++.+.-+-++
T Consensus 448 ~t~edId~~l~~L~~~~~~~~~~~~~ 473 (489)
T PLN02483 448 HSREDLIKALEVISEVGDLVGIKYFP 473 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHhCceecc
Confidence 67999999999999999887655433
No 80
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=8.4e-18 Score=165.05 Aligned_cols=267 Identities=15% Similarity=0.083 Sum_probs=167.5
Q ss_pred CcchhHHHHHHhCCcceE----EEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc
Q psy3048 38 QSNSSVEKSAIIGDVPVR----QLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY 112 (367)
Q Consensus 38 ~~H~s~~~~~~~~g~~v~----~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~ 112 (367)
.+|.+...+++..+..+. .+.++ +++.+|+++|++++.+.. |.+|+++ .+.+|...|+++|.++|+++
T Consensus 138 l~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~-----pklIv~~--~S~~s~~~D~a~i~~ia~~~ 210 (475)
T PLN03226 138 LSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFR-----PKLIIAG--ASAYPRDWDYARMRKIADKV 210 (475)
T ss_pred hhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcC-----CeEEEEe--cCcCCCccCHHHHHHHHHHc
Confidence 444444444444433322 33444 579999999999986532 4455443 45578889999999999999
Q ss_pred CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCC
Q psy3048 113 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQS 192 (367)
Q Consensus 113 gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 192 (367)
|++++||+||+.+.+..+.... .+..+|++++++||||.+|.| |++++++. ...........+.
T Consensus 211 ga~LlvD~AH~~Gli~~~~~~~---p~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~----------- 274 (475)
T PLN03226 211 GALLMCDMAHISGLVAAQEAAS---PFEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVY----------- 274 (475)
T ss_pred CCEEEEEchhhhCcccCCCCCC---CCCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHH-----------
Confidence 9999999999998876543221 233579999999999999998 77777543 1211000000000
Q ss_pred CCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3048 193 PDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK 271 (367)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~ 271 (367)
+| ..... ....| ..+++. .....++.++++.+...+++++.++..+++++|++.|.+
T Consensus 275 -d~--~~~i~-~a~~~------------------~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~ 332 (475)
T PLN03226 275 -DY--EDKIN-FAVFP------------------GLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS 332 (475)
T ss_pred -HH--HHHhc-cccCC------------------ccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 00 00000 00000 011111 123456677788877778888899999999999999998
Q ss_pred CCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe----E--ECCeeEEEEEe---cCCCCCHHHHHHHH
Q psy3048 272 DDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA----S--FQGRPFLRFVV---TSPETNQCDVAFAW 341 (367)
Q Consensus 272 ~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~----~--~~~~~~lRi~~---~~~~~~~edid~li 341 (367)
.|++++.+ ...+++.+.+........++.+.|...|+. +... . .-.+..+|+.. ++...+++|++++.
T Consensus 333 -~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~-~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia 410 (475)
T PLN03226 333 -KGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHIT-LNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVA 410 (475)
T ss_pred -CCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCE-ECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHH
Confidence 49999864 235666666543222345677777777743 2211 1 11234688722 45566799999999
Q ss_pred HHHHHHHHHh
Q psy3048 342 NEISHQSSEM 351 (367)
Q Consensus 342 ~~l~~~~~~~ 351 (367)
+.|.++++..
T Consensus 411 ~~i~~~~~~~ 420 (475)
T PLN03226 411 EFLHRAVTIA 420 (475)
T ss_pred HHHHHHHHHh
Confidence 9999988853
No 81
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=9.5e-18 Score=161.23 Aligned_cols=262 Identities=11% Similarity=0.049 Sum_probs=181.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
.|++.+..+.+....+.+.|++++.++++ .++.+|+++|++++.+.++ ++++++|+||||.+ +.+++|
T Consensus 115 eVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ln~P~NPTGav~~~~~l~~i 188 (393)
T COG0436 115 EVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTK------AIILNSPNNPTGAVYSKEELKAI 188 (393)
T ss_pred EEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccce------EEEEeCCCCCcCcCCCHHHHHHH
Confidence 36677889999999999999999999974 3899999999999999774 99999999999998 578999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhh--CCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLK--RGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+++|++||++++.|++|....+........+ .+....-+.+-+..|.++ +++.+|+++..+....... .....+
T Consensus 189 ~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~-~~~~~~-- 265 (393)
T COG0436 189 VELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAAL-RKLKSY-- 265 (393)
T ss_pred HHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHH-HHHHHh--
Confidence 9999999999999999987666431111111 111011233445788876 5588999998644333221 100111
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISL 261 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~l 261 (367)
...+.+.+...+..++|..-. .+.++...+...+.
T Consensus 266 --------------------------------------------~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~r 301 (393)
T COG0436 266 --------------------------------------------LTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRER 301 (393)
T ss_pred --------------------------------------------cccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 111112122233333333221 23556666778899
Q ss_pred HHHHHHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC----CeeEEEEEecCCCCCHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ----GRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~----~~~~lRi~~~~~~~~~ed 336 (367)
++.+.+.|.+++|+.+..+| ....++..++. ...+.+++++|+++..+.+.|+... |.+++|+++.. ++++
T Consensus 302 rd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~-~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~---~~~~ 377 (393)
T COG0436 302 RDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE-LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT---SEET 377 (393)
T ss_pred HHHHHHHHHhcCCeeeccCCCeeEEEEeecCC-CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec---CHHH
Confidence 99999999999899998855 55555556654 2346789999888876666665443 34699997754 4588
Q ss_pred HHHHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQSSE 350 (367)
Q Consensus 337 id~li~~l~~~~~~ 350 (367)
++..++.+++.++.
T Consensus 378 l~~a~~rl~~~~~~ 391 (393)
T COG0436 378 LEEALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888765
No 82
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=2.5e-17 Score=160.24 Aligned_cols=262 Identities=14% Similarity=0.078 Sum_probs=170.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-+|+++...|.++..+++..|++++.++.+ |.+++++.++.... ..+.+|++++++|++|.+.|+++|.++|
T Consensus 132 g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~--~~t~~v~i~~~~n~tG~~~~l~~i~~l~ 204 (410)
T PRK13392 132 GCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDP--DRPKLIAFESVYSMDGDIAPIEAICDLA 204 (410)
T ss_pred CCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccC--CCCEEEEEeCCCCCCcccccHHHHHHHH
Confidence 3477888889999999988899998877643 66778777764321 1246899999999999999999999999
Q ss_pred hhcCcEEEEecccccccccCh-hhhhhhCC-CCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLP-EYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+... ..-....+ .+..|+++.+.+|+++.+. |++.. +.+..........+|.....
T Consensus 205 ~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~-- 279 (410)
T PRK13392 205 DRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTA-- 279 (410)
T ss_pred HHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCc--
Confidence 999999999999985543211 00000112 2346888889999998653 55543 33333321111122211100
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
. ....+.++.++|+..... ....++..+.++++.+
T Consensus 280 ------------------------------------------~-~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~ 314 (410)
T PRK13392 280 ------------------------------------------L-PPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKA 314 (410)
T ss_pred ------------------------------------------C-CHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHH
Confidence 0 001123344555543222 2344667888899999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.|+++ |+++. ++..+++.+.+.. .....++.++|. ++| +++.+.. ..+..++|+++ +...+++|+|++++
T Consensus 315 ~L~~~-g~~~~-~~~~~~~~i~~~~-~~~~~~~~~~L~~~~G-I~v~~~~~p~~~~~~~~lRis~-~~~~t~edid~l~~ 389 (410)
T PRK13392 315 KLNAN-GIPVM-PSPSHIVPVMVGD-PTLCKAISDRLMSEHG-IYIQPINYPTVPRGTERLRITP-TPLHDDEDIDALVA 389 (410)
T ss_pred HHHHc-CCCCC-CCCCCEEEEEeCC-HHHHHHHHHHHHHhCC-EEEeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHH
Confidence 99887 77765 3455666555542 334568888887 457 4554432 12446899976 56778999999999
Q ss_pred HHHHHHHHhhC
Q psy3048 343 EISHQSSEMNL 353 (367)
Q Consensus 343 ~l~~~~~~~~~ 353 (367)
+|+++.+++..
T Consensus 390 aL~~~~~~~~~ 400 (410)
T PRK13392 390 ALVAIWDRLEL 400 (410)
T ss_pred HHHHHHHHcCC
Confidence 99999877643
No 83
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.79 E-value=3.4e-17 Score=158.35 Aligned_cols=257 Identities=13% Similarity=0.018 Sum_probs=173.3
Q ss_pred CceEEEecCCcchhHHHHHHhC----CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIG----DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~----g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
++.+|+++..+|.|+..++++. ++++..++++ |+++|+++++....+ ..+|++....++.|.+.|+++
T Consensus 199 ~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~---~~~Vv~EgV~SmdGdiapL~e 270 (476)
T PLN02955 199 EKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMK---RKVVVTDSLFSMDGDFAPMEE 270 (476)
T ss_pred CCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCC---ceEEEEeCCCCCCCCcCCHHH
Confidence 3568899999999999999986 5777777765 999999999765431 356777777899999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh-hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP-EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|.++|++||++++||+||+.+.+... .......++ ...|+++.+..|.+++. .|++.. +....+........|++
T Consensus 271 L~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~g-s~~~~~~l~~~~~~~if 347 (476)
T PLN02955 271 LSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIAC-SKKWKQLIQSRGRSFIF 347 (476)
T ss_pred HHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc--Cceeec-HHHHHHHHHHhCCCCee
Confidence 99999999999999999997655320 100111122 34689999999998643 334444 33333322233445554
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
+... .. ..+.+..++++.+..+ ..+.++.+++.
T Consensus 348 Stal--------------------------------------------pp-~~aaa~laal~l~~~~--~~~r~~L~~n~ 380 (476)
T PLN02955 348 STAI--------------------------------------------PV-PMAAAAYAAVVVARKE--KWRRKAIWERV 380 (476)
T ss_pred cccc--------------------------------------------cH-HHHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 4311 00 1122333444433222 23567788888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeEECCeeEEEEEecCCCCCHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KASFQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~~~~~~~lRi~~~~~~~~~edid 338 (367)
+|+++.+ |+.+ .++++.+.+.. +....++.++|.++|.+ +. |+...+...+|+++ +...+++||+
T Consensus 381 ~~fr~~~----G~~~----~sPI~pI~ig~-~~~a~~~~~~L~~~Gi~-v~~i~yPtVP~g~~rLRi~l-sA~Ht~edId 449 (476)
T PLN02955 381 KEFKALS----GVDI----SSPIISLVVGN-QEKALKASRYLLKSGFH-VMAIRPPTVPPNSCRLRVTL-SAAHTTEDVK 449 (476)
T ss_pred HHHHHhc----CCCC----CCCEEEEEeCC-HHHHHHHHHHHHHCCCE-EEEECCCCCCCCCceEEEee-CCCCCHHHHH
Confidence 9998842 5542 35666666644 55567889999999954 43 34446677899977 4566799999
Q ss_pred HHHHHHHHHHHHhhCC
Q psy3048 339 FAWNEISHQSSEMNLP 354 (367)
Q Consensus 339 ~li~~l~~~~~~~~~~ 354 (367)
+++++|.++.+....+
T Consensus 450 ~lv~~L~~~~~~~~~~ 465 (476)
T PLN02955 450 KLITALSSCLDFDNTA 465 (476)
T ss_pred HHHHHHHHHHhhhcce
Confidence 9999999987765443
No 84
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.79 E-value=2.4e-17 Score=159.98 Aligned_cols=261 Identities=12% Similarity=0.048 Sum_probs=169.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+.+|+++...|.++..++...|+++..++.+ |++++++.++.... ..+.+|++++++|++|.+.|+++|.++|
T Consensus 131 ~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~--~~~~~v~~e~~~~~~G~~~~l~~i~~l~ 203 (402)
T TIGR01821 131 GCVIFSDELNHASMIEGIRHSGAEKFIFRHN-----DVAHLEKLLQSVDP--NRPKIIAFESVYSMDGDIAPIEEICDLA 203 (402)
T ss_pred CCEEEEcchHhHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHH
Confidence 4577777789999999998889887766543 78889888864311 1246888999999999999999999999
Q ss_pred hhcCcEEEEecccccccccC-hhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLL-PEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+.. ........++ ...|++..+..|.++.+. |+++. +++..........+|.+..
T Consensus 204 ~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~-~~~~~~~l~~~~~~~~~t~--- 277 (402)
T TIGR01821 204 DKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAA-SRKLIDAIRSYAPGFIFTT--- 277 (402)
T ss_pred HHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC--ceeec-CHHHHHHHHHhCcCceecC---
Confidence 99999999999998554311 0000001122 235888889999997643 45443 3332322111111111110
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
. .....+.+..++++.+... ..+.++..++++++.+
T Consensus 278 -----------------------------------------~-~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~ 313 (402)
T TIGR01821 278 -----------------------------------------S-LPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKN 313 (402)
T ss_pred -----------------------------------------c-CCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHH
Confidence 0 0001123334455544322 4445566789999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.|+++ |++++. +..+++.+.+.. .....++.++|.++ | +++.+.. ..+..++|+++ +.+.+++|++++++
T Consensus 314 ~L~~~-g~~~~~-~~~~i~~i~~~~-~~~a~~~~~~L~~~~G-i~v~~~~~p~~~~g~~~lRis~-~~~~t~edi~~~~~ 388 (402)
T TIGR01821 314 LLEAL-GIPVIP-NPSHIVPVIIGD-AALCKKVSDLLLNKHG-IYVQPINYPTVPRGTERLRITP-TPAHTDKMIDDLVE 388 (402)
T ss_pred HHHHc-CCCcCC-CCCCEEEEEeCC-HHHHHHHHHHHHhcCC-EEEEeECCCCCCCCCceEEEEe-CCCCCHHHHHHHHH
Confidence 99887 777653 345666665532 23456788888755 6 4554422 23456899976 56788999999999
Q ss_pred HHHHHHHHhh
Q psy3048 343 EISHQSSEMN 352 (367)
Q Consensus 343 ~l~~~~~~~~ 352 (367)
+|+++++++.
T Consensus 389 ~l~~~~~~~~ 398 (402)
T TIGR01821 389 ALLLVWDRLG 398 (402)
T ss_pred HHHHHHHHcC
Confidence 9999988753
No 85
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.78 E-value=4.5e-17 Score=158.26 Aligned_cols=262 Identities=11% Similarity=0.040 Sum_probs=171.1
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
++.+|+++...|.+...++...|+++..++.+ |+++|++.++.... ..+.+|+++++.+++|.+.|+++|.++
T Consensus 131 ~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~--~~~~~v~~~~v~s~~G~~~~l~~i~~l 203 (407)
T PRK09064 131 PDCVIFSDELNHASMIEGIRRSRCEKHIFRHN-----DVAHLEELLAAADP--DRPKLIAFESVYSMDGDIAPIAEICDL 203 (407)
T ss_pred CCCEEEEeCcchHHHHHHHHHcCCcEEEECCC-----CHHHHHHHHHhccC--CCCeEEEEeCCCCCCccccCHHHHHHH
Confidence 45678888888999988988888887766643 88999998864321 124688899999999999999999999
Q ss_pred HhhcCcEEEEeccccccccc-ChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALL-LPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~-~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++++|++|+.+.+. ....-....++ ...|+++.+.+|.++.+ | |+++. ++..+........+|.+..
T Consensus 204 ~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~-~~~~~~~l~~~~~~~~~t~-- 278 (407)
T PRK09064 204 ADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAG-SAALVDAVRSYAPGFIFTT-- 278 (407)
T ss_pred HHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEec-CHHHHHHHHHhCccccccC--
Confidence 99999999999999854321 11000011122 34588888999998753 3 55554 3333322111111111110
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. .....+.+...+++.+... ....++..++++++.
T Consensus 279 ------------------------------------------~-~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~ 313 (407)
T PRK09064 279 ------------------------------------------S-LPPAIAAAALASIRHLKES--NEERERHQERAAKLK 313 (407)
T ss_pred ------------------------------------------c-CCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHH
Confidence 0 0011123344455544332 234567889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li 341 (367)
+.|+++ |++++. +..+++.+.+.. .....++.++|.++ | +++.+.. ..+..++|+++ +.+++++|+++++
T Consensus 314 ~~L~~~-g~~~~~-~~~~iv~i~~~~-~~~~~~l~~~L~~~~g-i~v~~~~~p~~~~~~~~lRis~-~~~~t~edi~~l~ 388 (407)
T PRK09064 314 AALDAA-GIPVMP-NESHIVPVMVGD-PEKCKKASDMLLEEHG-IYVQPINYPTVPRGTERLRITP-TPFHTDEMIDHLV 388 (407)
T ss_pred HHHHHc-CCCCCC-CCCCEEEEEeCC-HHHHHHHHHHHHHhCC-EEEeeECCCCCCCCCceEEEEe-CCCCCHHHHHHHH
Confidence 999886 777654 445666666643 23456888888755 6 4454322 12446899976 5788899999999
Q ss_pred HHHHHHHHHhh
Q psy3048 342 NEISHQSSEMN 352 (367)
Q Consensus 342 ~~l~~~~~~~~ 352 (367)
++|+++++++.
T Consensus 389 ~~l~~~~~~~~ 399 (407)
T PRK09064 389 EALVEVWARLG 399 (407)
T ss_pred HHHHHHHHHcC
Confidence 99999987653
No 86
>PLN02822 serine palmitoyltransferase
Probab=99.78 E-value=2.1e-16 Score=155.99 Aligned_cols=266 Identities=11% Similarity=0.076 Sum_probs=174.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC---CCcc-EEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK---GLIP-CCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~---~~~~-~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-+|+++...|+++..++.+.|.+++.++++ |.++|+..+++..+. .... .+|++....+++|.+.|+++|
T Consensus 193 gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i 267 (481)
T PLN02822 193 GDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEI 267 (481)
T ss_pred CCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHH
Confidence 3356678999999999999999999999876 677777777653221 0112 578888888889999999999
Q ss_pred HHHHhhcCcEEEEecccccccccC-hhhhhhhCCC--CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGL--EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
.++|++||+++++|++|+.+.+.- ...-....++ ...|+++.+..|.++.+ | |+++. +...+.........|.+
T Consensus 268 ~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~-G-G~i~g-~~~ii~~~~~~~~~~~f 344 (481)
T PLN02822 268 VRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATE-G-GFCTG-SARVVDHQRLSSSGYVF 344 (481)
T ss_pred HHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhC-C-eEEEc-CHHHHHHHHhcCCceee
Confidence 999999999999999998554321 1000111223 25699999999998743 3 55554 33333221111112221
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
... . +.+.+.+..++|+.+. ...+..++.+++.
T Consensus 345 sa~--------------------------------------------l-Pp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~ 377 (481)
T PLN02822 345 SAS--------------------------------------------L-PPYLASAAITAIDVLE--DNPSVLAKLKENI 377 (481)
T ss_pred ccc--------------------------------------------c-CHHHHHHHHHHHHHHH--hCHHHHHHHHHHH
Confidence 110 0 0011122233444332 2256778899999
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-------chHHHHHHHHHh-ccCcEEEEEeEE------CCeeEEEEEec
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGD-------NDLTNQLYERLM-SHKQIYIIKASF------QGRPFLRFVVT 328 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-------~~~~~~l~~~L~-~~g~~~~~~~~~------~~~~~lRi~~~ 328 (367)
+++++.|++++|+.+..++...++.+.+.+. .....++.++|. ++| +++.+..+ ..+..+|++++
T Consensus 378 ~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~G-V~v~~~~~~~~~~~~~~~~lRi~is 456 (481)
T PLN02822 378 ALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDS-VLVVVSKRSTLDKCRLPVGIRLFVS 456 (481)
T ss_pred HHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCC-EEEEeeCCCCcCCCCCCCcEEEEEC
Confidence 9999999998888886667778888887531 122357888887 667 45554311 12357999764
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 329 SPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~~~~~ 352 (367)
...+++||++++++|+++++++-
T Consensus 457 -~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 457 -AGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHh
Confidence 45589999999999999988753
No 87
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=1.7e-17 Score=161.67 Aligned_cols=262 Identities=13% Similarity=0.045 Sum_probs=164.4
Q ss_pred ceEEEecCCcchhHHH---HH--HhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSSVEK---SA--IIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~---~~--~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.-.|+++..+|.+... .. ...|++++.++.+ +++.+|+++|++++++.. +.+|+++. +.+|...|++
T Consensus 111 gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~ 183 (416)
T PRK00011 111 GDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFK 183 (416)
T ss_pred CCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHH
Confidence 3457777778865322 11 2245788888876 458999999999997521 23555543 3467778999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|.++|++||+++++|+||+.+......... .+..+|+++.++||++.+|.| |+++..++............+...
T Consensus 184 ~I~~la~~~~~~livD~a~~~g~~~~g~~~~---~~~~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~~~~~ 259 (416)
T PRK00011 184 RFREIADEVGAYLMVDMAHIAGLVAAGVHPS---PVPHADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFPGIQG 259 (416)
T ss_pred HHHHHHHHcCCEEEEECcchhcccccCccCC---CCCCCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCccccC
Confidence 9999999999999999999765442211111 122469999999999976654 566665444333221111010000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. +.. ....++..++.....++++++.++..++++
T Consensus 260 ~--------~~~--------------------------------------~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~ 293 (416)
T PRK00011 260 G--------PLM--------------------------------------HVIAAKAVAFKEALEPEFKEYAQQVVKNAK 293 (416)
T ss_pred C--------ccH--------------------------------------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 0 000 011233334444445678889999999999
Q ss_pred HHHHHhcCCCCeEEeC-CCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE----e---EECCeeEEEEEec---CCCC
Q psy3048 264 KFADLVEKDDRFELVC-PPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK----A---SFQGRPFLRFVVT---SPET 332 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~---~~~~~~~lRi~~~---~~~~ 332 (367)
++++.|++. |+++.. ....+.+++.+.+......++.+.|.++|+. +.. . ....+..+|++.. ....
T Consensus 294 ~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~-v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~ 371 (416)
T PRK00011 294 ALAEALAER-GFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANIT-VNKNAVPFDPRSPFVTSGIRIGTPAITTRGF 371 (416)
T ss_pred HHHHHHHhC-CCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcE-EccCcCCCCCCCCCCCCceEecCHHHhhcCc
Confidence 999999986 888763 2344677777643221346788888888854 321 1 1112346898431 1245
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~ 350 (367)
+++|+++++++|+++++.
T Consensus 372 t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 372 KEAEMKEIAELIADVLDN 389 (416)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 799999999999998664
No 88
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.2e-17 Score=157.86 Aligned_cols=258 Identities=14% Similarity=0.059 Sum_probs=168.6
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
.|++++.+|..+...++..|++++.++.+. ++.+|+++|++.+++.+ .++++++++|++|.+- ++++|
T Consensus 110 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPtG~~~~~~~~~~l 183 (382)
T PRK06108 110 EVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPTGWTASRDDLRAI 183 (382)
T ss_pred EEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCCCcccCHHHHHHH
Confidence 466677899998888999999999999863 46799999999886544 4777889999999874 57889
Q ss_pred HHHHhhcCcEEEEeccccccccc-Chhhhh--hhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCcccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALL-LPEYAH--LKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~-~~~~~~--~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
+++|+++|+++++|++|+.+.+. ...... .+.......+++.+.+|.++. +.++|+++... +.+..... ...+.
T Consensus 184 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~~~~~~~-~~~~~ 261 (382)
T PRK06108 184 LAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-ALGQVLEK-LIEYN 261 (382)
T ss_pred HHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HHHHHHHH-HHHhc
Confidence 99999999999999999876543 111110 011111224778889998864 45689988743 32322110 00000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
.. +...+.......++.. +.+.+++..++..++
T Consensus 262 ~~----------------------------------------------~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~ 294 (382)
T PRK06108 262 TS----------------------------------------------CVAQFVQRAAVAALDE-GEDFVAELVARLRRS 294 (382)
T ss_pred cc----------------------------------------------CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHH
Confidence 00 0000111222222321 334567778888899
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edi 337 (367)
.+++.+.|++++|+.+..+.....++++++. .....++.+.|.+ .| +++.++. + .+..++|++++. +++++
T Consensus 295 ~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~-~~~~~~~~~~ll~~~g-V~v~pg~~f~~~~~~~~Ris~~~---~~~~l 369 (382)
T PRK06108 295 RDHLVDALRALPGVEVAKPDGAMYAFFRIPG-VTDSLALAKRLVDEAG-LGLAPGTAFGPGGEGFLRWCFAR---DPARL 369 (382)
T ss_pred HHHHHHHHHhCCCCcccCCCeeEEEEEeCCC-CCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEecC---CHHHH
Confidence 9999999988888887654433445566653 2235678888765 56 4454432 2 235799998753 78999
Q ss_pred HHHHHHHHHHHH
Q psy3048 338 AFAWNEISHQSS 349 (367)
Q Consensus 338 d~li~~l~~~~~ 349 (367)
+.+++.|+++++
T Consensus 370 ~~~l~~l~~~l~ 381 (382)
T PRK06108 370 DEAVERLRRFLA 381 (382)
T ss_pred HHHHHHHHHHHh
Confidence 999999988754
No 89
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.77 E-value=7.9e-17 Score=155.83 Aligned_cols=261 Identities=11% Similarity=0.032 Sum_probs=170.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++..|..+..+++..|++++.++.+ .++.+|+++|++++++.+ .+|++++++|++|.+. ++++
T Consensus 115 gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~~~~~~~~ 188 (393)
T PRK05764 115 GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVYSPEELEA 188 (393)
T ss_pred CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCcccCHHHHHH
Confidence 3467778899999999999999999999986 357899999999986654 4778889999999984 5889
Q ss_pred HHHHHhhcCcEEEEecccccccccChh---hhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
|+++|++||+++++|++|+...+.... ......+....+++..+..|.++.| ..+|+++.. ++....... +
T Consensus 189 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~~~~~~----~ 263 (393)
T PRK05764 189 IADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELIKAMSK----L 263 (393)
T ss_pred HHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHHHHHHH----H
Confidence 999999999999999999765432111 1111112222367788889998744 347777743 333322110 0
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLRKH 258 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~~~ 258 (367)
...... . ...+..+++.+.+ ..+.+++..++.
T Consensus 264 ~~~~~~----------------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~ 297 (393)
T PRK05764 264 QSHSTS----------------------------------------N------PTSIAQYAAVAALNGPQDEVEEMRQAF 297 (393)
T ss_pred Hhhccc----------------------------------------C------CChHHHHHHHHHHcCChHHHHHHHHHH
Confidence 000000 0 0112223333332 234566677777
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCch----HHHHHHHHHhc-cCcEEEEEe-EECCeeEEEEEecCCCC
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDND----LTNQLYERLMS-HKQIYIIKA-SFQGRPFLRFVVTSPET 332 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~----~~~~l~~~L~~-~g~~~~~~~-~~~~~~~lRi~~~~~~~ 332 (367)
.+..+++.+.|++++|+.+..+.....+++.++.... ...++.+.+.+ .|+ .+.++ .+....++|+++..
T Consensus 298 ~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~f~~~~~vRis~~~--- 373 (393)
T PRK05764 298 EERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGV-AVVPGIAFGAPGYVRLSYAT--- 373 (393)
T ss_pred HHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCE-EEccccccCCCCEEEEEecC---
Confidence 8888999999999888887654433344555543111 13678777765 464 44433 33335799997643
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy3048 333 NQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~~ 351 (367)
++++++.++++|.+++++.
T Consensus 374 ~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 374 SLEDLEEGLERIERFLESL 392 (393)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 6999999999999987653
No 90
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.77 E-value=1.5e-16 Score=153.83 Aligned_cols=263 Identities=14% Similarity=0.062 Sum_probs=168.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++..|++...++...|++++.++. .|+++|++++++.......+++|+..+..+++|.+.|+++|.++|
T Consensus 126 gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la 200 (397)
T PRK06939 126 EDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLA 200 (397)
T ss_pred CCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHH
Confidence 345777889999999999989998887764 489999999876332222345677766788899999999999999
Q ss_pred hhcCcEEEEecccccccccC-hhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLL-PEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+.. ........++ ...|+++.+.+|++.++ ..|+++.+ +...........++.....
T Consensus 201 ~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~-~~~~~~l~~~~~~~~~~~~-- 276 (397)
T PRK06939 201 DKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGR-KEVIDWLRQRSRPYLFSNS-- 276 (397)
T ss_pred HHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeC-HHHHHHHHHhCccccccCC--
Confidence 99999999999996433221 1101111122 24589999999999655 45777764 3333322111111110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
. ....+.++.++++.+. . .++..++..++.+++.+
T Consensus 277 ------------------------------------------~-~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 277 ------------------------------------------L-APAIVAASIKVLELLE-E-SDELRDRLWENARYFRE 311 (397)
T ss_pred ------------------------------------------C-CHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHH
Confidence 0 0001122333344332 1 24667788899999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ ++++.. +..+.+.+.++. .....++.+.|.++|+. +.+..+ .+..++|+++ +.+++++|++++++.
T Consensus 312 ~L~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~-v~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~l~~ 386 (397)
T PRK06939 312 GMTAA-GFTLGP-GEHPIIPVMLGD-AKLAQEFADRLLEEGVY-VIGFSFPVVPKGQARIRTQM-SAAHTKEQLDRAIDA 386 (397)
T ss_pred HHHHc-CCCcCC-CCCCEEEEEECC-HHHHHHHHHHHHHCCce-EeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHH
Confidence 99886 666543 333444444432 23456899999989854 433322 2346899966 456789999999999
Q ss_pred HHHHHHHh
Q psy3048 344 ISHQSSEM 351 (367)
Q Consensus 344 l~~~~~~~ 351 (367)
|+++++++
T Consensus 387 L~~~~~~~ 394 (397)
T PRK06939 387 FEKVGKEL 394 (397)
T ss_pred HHHHHHHh
Confidence 99987764
No 91
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.77 E-value=3.4e-17 Score=159.11 Aligned_cols=262 Identities=13% Similarity=0.053 Sum_probs=161.9
Q ss_pred ceEEEecCCcchh-HHHHHHh--CCcce--EEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSS-VEKSAII--GDVPV--RQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s-~~~~~~~--~g~~v--~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.-.|++++.+|.+ +..+++. .+..+ ..++++ .++.+|+++|++.+++.. +.+|++.. +.+|...|++
T Consensus 114 GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-----~klVi~~~--~~~g~~~dl~ 186 (416)
T PRK13034 114 GDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHK-----PKLIIAGF--SAYPRELDFA 186 (416)
T ss_pred CCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcC-----CeEEEECC--CccccccCHH
Confidence 4467778888877 3333332 12222 234443 357799999999986521 34665543 4468888999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|.++||+||+++++|+||+.+.+..+... ..+..+|++++++|||+.+|.| |+++..++...... . .+++.
T Consensus 187 ~l~~la~~~g~~livD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~-~---~~~~~ 258 (416)
T PRK13034 187 RFREIADEVGALLMVDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKI-N---SAVFP 258 (416)
T ss_pred HHHHHHHHcCCEEEEeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHH-H---hhcCC
Confidence 999999999999999999998876543221 1234579999999999988876 55555444322211 0 11111
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+.. + ...+ ....++..++......+..++.++..++++
T Consensus 259 ~~~---~-~~~~--------------------------------------~~~aa~~~al~~~~~~~~~~~~~~l~~~a~ 296 (416)
T PRK13034 259 GLQ---G-GPLM--------------------------------------HVIAAKAVAFGEALQPEFKTYAKQVIANAQ 296 (416)
T ss_pred ccc---C-CccH--------------------------------------HHHHHHHHHHHHHhChhHHHHHHHHHHHHH
Confidence 100 0 0000 001222222333222344566789999999
Q ss_pred HHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE----e---EECCeeEEEEEec---CCCC
Q psy3048 264 KFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK----A---SFQGRPFLRFVVT---SPET 332 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~---~~~~~~~lRi~~~---~~~~ 332 (367)
+|+++|++. |+++..+ .+++++.+.+...+.....+.++|.+.|+ ++.. . ....+..+|++.+ +...
T Consensus 297 ~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI-~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~ 374 (416)
T PRK13034 297 ALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGI-TVNKNTVPGDTESPFVTSGIRIGTPAGTTRGF 374 (416)
T ss_pred HHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCc-EEeccCCCCCCcCCCCCCeeEeCcHHHHhCCC
Confidence 999999987 9998753 45666666654422234556678888884 4432 1 1112457999652 2256
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~ 350 (367)
+++|+++++++|++++++
T Consensus 375 ~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 375 GEAEFREIANWILDVLDD 392 (416)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 699999999999998774
No 92
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.77 E-value=2.9e-17 Score=159.31 Aligned_cols=261 Identities=15% Similarity=0.054 Sum_probs=161.1
Q ss_pred eEEEecCCcchhHHHH-----HHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh
Q psy3048 31 LVAYASDQSNSSVEKS-----AIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~-----~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
-.|++++..|.+.... ++..|.+++.++.+. ++.+|++++++++.+.. +.++++++++ +|...|+
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~-----~~~v~~~~~~--~~~~~~~ 178 (402)
T cd00378 106 DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFK-----PKLIVAGASA--YPRPIDF 178 (402)
T ss_pred CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCC-----CCEEEecCcc--cCCCcCH
Confidence 3566666777654322 455677777776542 68999999999986421 2466666553 4677899
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++|+++||+||+++++|++|..+....+..... +..+|+++.++|||+.+|.| |++++.++....+......++..
T Consensus 179 ~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~~~~ 254 (402)
T cd00378 179 KRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFPGLQ 254 (402)
T ss_pred HHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCcccc
Confidence 999999999999999999986554322211111 12459999999999976655 55555543433322111101100
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. +.+ ....++..++......++++..++..+++
T Consensus 255 ~~--------~~~--------------------------------------~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 288 (402)
T cd00378 255 GG--------PHL--------------------------------------HVIAAKAVALKEALEPEFKAYAKQVVENA 288 (402)
T ss_pred CC--------chH--------------------------------------HHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 00 000 01122233344333335677888899999
Q ss_pred HHHHHHhcCCCCeEEeC-CCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE----eEE---CCeeEEEEEecC---CC
Q psy3048 263 KKFADLVEKDDRFELVC-PPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK----ASF---QGRPFLRFVVTS---PE 331 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~---~~~~~lRi~~~~---~~ 331 (367)
+++.+.|+++ |+.+.. +...+.+++++++.......+.+.|.+.|+ .+.+ ... .+...+|++.+. ..
T Consensus 289 ~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI-~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~ 366 (402)
T cd00378 289 KALAEALKER-GFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGI-TVNKNTLPWDPSSPFVPSGIRIGTPAMTTRG 366 (402)
T ss_pred HHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCc-EEcCCcCCCCCCCCCCCCeeEecCHHHHHhC
Confidence 9999999987 888764 446677777775322223456666776774 3422 111 134589996532 23
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy3048 332 TNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~ 350 (367)
.+++|++.+++.|++++++
T Consensus 367 ~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 367 MGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 4699999999999998664
No 93
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.77 E-value=3.6e-17 Score=158.14 Aligned_cols=263 Identities=13% Similarity=0.111 Sum_probs=169.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|.++...+...|++++.++++. ++.+|+++|++++++.+ .++++++++|++|.+.| +++
T Consensus 117 g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~i~~p~NPtG~~~~~~~~~~ 190 (391)
T PRK08361 117 GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRT------RMIVINYPNNPTGATLDKEVAKA 190 (391)
T ss_pred CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccccc------EEEEEeCCCCCCCcCcCHHHHHH
Confidence 34677788899999999999999999999864 46799999999987655 47788899999999988 899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
|+++|+++++++++|++|+.+.+...............++++.+.+|.++.| ..+|+++... +.+...... ..+...
T Consensus 191 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~~~~~~-~~~~~~ 268 (391)
T PRK08361 191 IADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIKDMIKL-HAYIIG 268 (391)
T ss_pred HHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHHHHHHH-Hhhhcc
Confidence 9999999999999999997654422111111110112367889999988754 2388888743 333221100 000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la 262 (367)
. ...+....+...+..-. .+.+++..++..+..
T Consensus 269 ~----------------------------------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK08361 269 N----------------------------------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERR 302 (391)
T ss_pred C----------------------------------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 0 00011111112222111 134677777788888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edid 338 (367)
+.+.+.|++++|+.+..+.....++.+++.......++.+.|.+ .| +.+.++. + .+..++|+++.. ++++++
T Consensus 303 ~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~g-v~v~pg~~f~~~~~~~iRi~~~~---~~~~l~ 378 (391)
T PRK08361 303 KLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKAR-VVVIPGTAFGKAGEGYIRISYAT---SKEKLI 378 (391)
T ss_pred HHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCC-EEEcCchhhCCCCCCEEEEEecC---CHHHHH
Confidence 99999999888887655443334455665312235678888765 46 4454432 2 235799997653 577888
Q ss_pred HHHHHHHHHHHH
Q psy3048 339 FAWNEISHQSSE 350 (367)
Q Consensus 339 ~li~~l~~~~~~ 350 (367)
..++.|++++++
T Consensus 379 ~al~~l~~~l~~ 390 (391)
T PRK08361 379 EAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHhc
Confidence 888888887654
No 94
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.77 E-value=7e-17 Score=153.47 Aligned_cols=245 Identities=13% Similarity=0.086 Sum_probs=164.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|..+...++..|++++.++.++++.+|+++|++++.+.+ .+|++++++|++|.+.|++++.++|+
T Consensus 96 d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~ 169 (346)
T TIGR01141 96 DAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLE 169 (346)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 456667777766667778899999999998778899999999875544 47888899999999999999999998
Q ss_pred hc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 EY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
.+ |+++++|++|+.......... ..... ..+++..+.+|+++.| .++|+++.+ ++.+.+.......
T Consensus 170 ~~~~~~~ii~D~~y~~~~~~~~~~~-~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~-------- 238 (346)
T TIGR01141 170 RTPEDALVVVDEAYGEFSGEPSTLP-LLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKVRAP-------- 238 (346)
T ss_pred hCCCCcEEEEECchhhhcCCccHHH-HHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhccCC--------
Confidence 87 999999999974332111111 11111 1246677889999544 468888874 3333221110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~la~~l~ 266 (367)
+ . ...+.+.++...+.. ..+++..++..++++++.
T Consensus 239 -------~-------------------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 274 (346)
T TIGR01141 239 -------F-------------------------------N------LSRLAQAAAIAALRDDDFIEKTVEEINAERERLY 274 (346)
T ss_pred -------C-------------------------------C------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 001122222222222 247777888889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECC-eeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQG-RPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~-~~~lRi~~~~~~~~~edid~li~~l 344 (367)
+.|++++|+++. ++....+++.++. ..+++.++|.++|+ .+.+.. +.+ .+++|+++. +++|+++++++|
T Consensus 275 ~~L~~~~g~~~~-~~~g~~~~~~~~~---~~~~~~~~L~~~gI-~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l 345 (346)
T TIGR01141 275 DGLKKLPGLEVY-PSDANFVLIRFPR---DADALFEALLEKGI-IVRDLNSYPGLPNCLRITVG----TREENDRFLAAL 345 (346)
T ss_pred HHHHhcCCCEEC-CCcCCEEEEecCC---CHHHHHHHHHHCCe-EEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHh
Confidence 999988888854 4455677777653 35788999998884 444432 212 578999753 689999999887
Q ss_pred H
Q psy3048 345 S 345 (367)
Q Consensus 345 ~ 345 (367)
+
T Consensus 346 ~ 346 (346)
T TIGR01141 346 R 346 (346)
T ss_pred C
Confidence 3
No 95
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.77 E-value=1.4e-16 Score=153.32 Aligned_cols=253 Identities=15% Similarity=0.093 Sum_probs=164.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++..|.+...++...|++++.++.. |++++++++++..+ ...++++.++.+++|.+.|+++|.++|+
T Consensus 124 d~V~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~~---~~~lvi~~~~~~~~G~~~~l~~i~~ia~ 195 (385)
T PRK05958 124 DLIVSDKLNHASLIDGARLSRARVRRYPHN-----DVDALEALLAKWRA---GRALIVTESVFSMDGDLAPLAELVALAR 195 (385)
T ss_pred CEEEEeCccCHHHHHHHHhcCCceEEeCCC-----CHHHHHHHHHhccC---CCeEEEEEecccCCCCcCCHHHHHHHHH
Confidence 356678899999999999999999888753 88999999875311 1246667778889999999999999999
Q ss_pred hcCcEEEEecccccccccC-h-hhhhhhCCCC-C-cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLL-P-EYAHLKRGLE-Y-VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~-~-~~~~~~~~~~-~-~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||+++++|++|+.+.+.. . .... ..++. . .+++..+.+|+++. .| |+++. +++..+........+....
T Consensus 196 ~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~-~G-g~~~~-~~~~~~~~~~~~~~~~~~~-- 269 (385)
T PRK05958 196 RHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGS-SG-AAVLG-SETLIDYLINRARPFIFTT-- 269 (385)
T ss_pred HhCCEEEEECcccccccCCCCCchHH-hhCCCCCCceEEEEechhhccc-CC-cEEEc-CHHHHHHHHHhCccceecC--
Confidence 9999999999997654321 1 1111 01121 2 24778889999964 45 66554 3332221111111111000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
........++.++++.+... .++.++..++.+++.
T Consensus 270 -------------------------------------------~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~ 304 (385)
T PRK05958 270 -------------------------------------------ALPPAQAAAARAALRILRRE--PERRERLAALIARLR 304 (385)
T ss_pred -------------------------------------------CCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHH
Confidence 00001123344445443222 566788889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|+++ ++++. ++..+++.|.++. .....++.++|.++|+. +.+.. ..+..++|+++ +.+++++|++++++
T Consensus 305 ~~L~~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~-v~~~~~~~~~~~~~~lRis~-~~~~~~~~i~~~l~ 379 (385)
T PRK05958 305 AGLRAL-GFQLM-DSQSAIQPLIVGD-NERALALAAALQEQGFW-VGAIRPPTVPAGTSRLRITL-TAAHTEADIDRLLE 379 (385)
T ss_pred HHHHHc-CCCcC-CCCCCEEEEEeCC-HHHHHHHHHHHHHCCce-EecccCCCCCCCCceEEEEe-cCCCCHHHHHHHHH
Confidence 999886 66654 4556677787753 33456899999988854 43211 12346899976 56788999999999
Q ss_pred HHHHH
Q psy3048 343 EISHQ 347 (367)
Q Consensus 343 ~l~~~ 347 (367)
.|+++
T Consensus 380 ~l~~~ 384 (385)
T PRK05958 380 ALAEA 384 (385)
T ss_pred HHHhc
Confidence 99875
No 96
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.76 E-value=9.1e-17 Score=154.73 Aligned_cols=277 Identities=14% Similarity=0.099 Sum_probs=170.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHH----HHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVK----EDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~----~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
.-.|+++..+|.++..++...|+++++++++ +++.+|+++|+++++ +.+ .+|++++ ++|...|+++
T Consensus 69 Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t------~~v~~~~---~~G~~~~~~~ 139 (380)
T TIGR03588 69 GDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLP------KAIVPVD---FAGKSVDMQA 139 (380)
T ss_pred CCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCc------eEEEEeC---CCCccCCHHH
Confidence 3457788899999999999999999999996 468899999999997 333 3555543 4799999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|.++|++||+++++|++|+.+...... . +......|+.++|+| |++..| ..|++++.++...++... +..
T Consensus 140 i~~l~~~~~~~lI~D~a~a~g~~~~~~-~--~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~----~~~ 211 (380)
T TIGR03588 140 IAALAKKHGLKIIEDASHALGAEYGGK-P--VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRL----LRS 211 (380)
T ss_pred HHHHHHHcCCEEEEECCCcccCccCCE-e--CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHH----HHH
Confidence 999999999999999999876542111 0 011113499998887 999876 455566665544433210 000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.+.. .....+ .. ....|.. ++ ....+.++.+..+.+++...+.+.++++.++.++++
T Consensus 212 ~g~~---~~~~~~--~~----~~~~~~~-~~-------------~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~ 268 (380)
T TIGR03588 212 HGIT---KDPLLF--EK----QDEGPWY-YE-------------QQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIA 268 (380)
T ss_pred CCCC---CCcccc--cc----cccCcce-ee-------------eeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000000 00 0000000 00 000011122233344444334566889999999999
Q ss_pred HHHHHHhcCCCCeEEeCCC-C----ceeEEEEEcC-CchHHHHHHHHHhccCcEEE---EEeEE--------CC------
Q psy3048 263 KKFADLVEKDDRFELVCPP-S----MGLVCFRLKG-DNDLTNQLYERLMSHKQIYI---IKASF--------QG------ 319 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~-~----~~~v~f~~~~-~~~~~~~l~~~L~~~g~~~~---~~~~~--------~~------ 319 (367)
+++.+.|++++++.+..++ . .....+.+.. .....+++.+.|.++|+..- .+... ..
T Consensus 269 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a 348 (380)
T TIGR03588 269 ARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSA 348 (380)
T ss_pred HHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHH
Confidence 9999999999887755432 1 1222333332 11235688888988884211 11100 00
Q ss_pred ----eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 320 ----RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 320 ----~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...+++ +++++.+++|+++++++|+++
T Consensus 349 ~~~~~~~l~l-P~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 349 ENFYLAEISL-PLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred HHHHhceEEc-CCCCCCCHHHHHHHHHHHHHh
Confidence 146777 568889999999999999886
No 97
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.76 E-value=1.3e-16 Score=146.11 Aligned_cols=265 Identities=13% Similarity=0.052 Sum_probs=185.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
+.||+. ...++.+++.+...|-++...|+. ..+.||.++||+++.+.. ++++++++|+||+|.+ ++|.
T Consensus 108 d~Vvi~-tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 108 DGVVIQ-TPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred CeeEec-CCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCccccHHHHH
Confidence 556654 468999999999999999998884 347789999999997754 2489999999999998 8999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhh-hhhhCCCCCcc--eeeeccccccccC-CcceeEEEecchhhhhhccCCcc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVD--SFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~-~~~~~~~~~~D--~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+|++||++||+.++.|+-|+-..+....+ .+..-+...+| +.+.++.|.|+.+ -.++.+++.++....+.
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~------ 255 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF------ 255 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHH------
Confidence 99999999999999999998665554222 22101111223 4455569999987 56777777665432211
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+..... ......+.+...+ +.+.-..|...+++..+...
T Consensus 256 -~~~l~~---------------------------------------~~~~~~n~lg~~A-~~aAY~~G~~WLd~L~~yl~ 294 (388)
T COG1168 256 -LKRLKR---------------------------------------NGLHGPSALGIIA-TEAAYNQGEPWLDELLEYLK 294 (388)
T ss_pred -HHHHHH---------------------------------------hcCCCCchHHHHH-HHHHHHhchHHHHHHHHHHH
Confidence 111100 0000000011122 22233348888999999999
Q ss_pred HHHHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---CCeeEEEEEecCCCCCHH
Q psy3048 260 SLAKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---QGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 260 ~la~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~e 335 (367)
.+.+|+.+.|.+ +|++++..|..+..+.+.+........++.+.|.++..+.+.++.. .|.+++|+.+.+ +++
T Consensus 295 ~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac---pr~ 371 (388)
T COG1168 295 DNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC---PRA 371 (388)
T ss_pred HHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC---CHH
Confidence 999999999976 6899999888888888887664433468888888888887765543 457899996654 566
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 336 DVAFAWNEISHQSSE 350 (367)
Q Consensus 336 did~li~~l~~~~~~ 350 (367)
-++..++.|+..++.
T Consensus 372 ~L~eal~ri~~al~~ 386 (388)
T COG1168 372 ILEEALERLKRALKK 386 (388)
T ss_pred HHHHHHHHHHHHHhc
Confidence 777777777766553
No 98
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=5.4e-16 Score=150.64 Aligned_cols=260 Identities=12% Similarity=0.044 Sum_probs=167.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-+|++++..|.++..+++..|.+++.++.. |++++++.++.... ..+.+|++.++++++|.+.|+++|.++|
T Consensus 131 g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~--~~~~~v~~~~v~~~~G~~~~l~~i~~l~ 203 (406)
T PRK13393 131 GCVILSDELNHASMIEGIRHSRAEKRIFRHN-----DPADLERKLSDLDP--HRPKLVAFESVYSMDGDIAPIAEICDVA 203 (406)
T ss_pred CCEEEEccchhHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHhccC--CCCEEEEEcCCCCCCCchhCHHHHHHHH
Confidence 3478888899999999999889888877653 78888888864321 1235788999999999999999999999
Q ss_pred hhcCcEEEEeccccccccc-ChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALL-LPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~-~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+. ....-....++ ...|++..+..|.++.+ | |++.. ++...........+|....
T Consensus 204 ~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~-G-G~~~~-~~~~~~~l~~~~~~~~~t~--- 277 (406)
T PRK13393 204 EKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM-G-GYITG-SAALCDFIRSFASGFIFTT--- 277 (406)
T ss_pred HHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc-C-ceeeC-CHHHHHHHHHhCcCceecC---
Confidence 9999999999999855431 11100011122 23478878899999864 2 45443 3332222111111111110
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
......+.++.++++.+...+. ..++..++.+++.+
T Consensus 278 ------------------------------------------~~~p~~~aa~~aaL~~~~~~~~--~~~~~~~~~~~l~~ 313 (406)
T PRK13393 278 ------------------------------------------SLPPAVAAGALASVRHLKASSA--ERERHQDRVARLRA 313 (406)
T ss_pred ------------------------------------------ccCHHHHHHHHHHHHHHhhCHH--HHHHHHHHHHHHHH
Confidence 0000112344455555433332 23566788999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEe----EECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKA----SFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.|+++ |++++ ++..+++.+.+.. .....++.++|.++ | +++.+. ...+...+|+++ +.+++++|+|++++
T Consensus 314 ~L~~~-g~~~~-~~~~~i~~v~~~~-~~~~~~l~~~L~~~~G-i~v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~ 388 (406)
T PRK13393 314 RLDKA-GIPHL-PNPSHIVPVMVGD-PVLCKQISDELLDRYG-IYVQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQ 388 (406)
T ss_pred HHHHc-CCCcC-CCCCCeEEEEeCC-HHHHHHHHHHHHHhCC-EEEEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHH
Confidence 99886 77655 3445566555532 23456888888875 7 444432 223456899976 67889999999999
Q ss_pred HHHHHHHHh
Q psy3048 343 EISHQSSEM 351 (367)
Q Consensus 343 ~l~~~~~~~ 351 (367)
+|+++.+++
T Consensus 389 ~l~~~~~~~ 397 (406)
T PRK13393 389 ALSEIWARL 397 (406)
T ss_pred HHHHHHHhc
Confidence 999987764
No 99
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.75 E-value=1.6e-16 Score=166.31 Aligned_cols=258 Identities=14% Similarity=0.080 Sum_probs=165.8
Q ss_pred eEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+..... +..|++++.++.+++ ++ .+++ ..+++.+ ++.+|.+.|+++|+
T Consensus 166 ~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~~~~------~~vlvq~-p~~~G~i~d~~~i~ 228 (954)
T PRK05367 166 NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------HDDV------FGVLLQY-PGTSGEVRDYTALI 228 (954)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------cccE------EEEEEec-CCCCeeeccHHHHH
Confidence 47888999999987654 457999999987542 11 1111 2444444 57799999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccc-----cccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKW-----LLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~-----l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
++||++|++++||+.+.+..+..+... . .+|+++.++||| +++| ++|++++++. +.+.+ .+..+
T Consensus 229 ~~ah~~Gal~~vda~~~Al~~l~~pge---~---GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~l--pgriv 297 (954)
T PRK05367 229 AAAHARGALVAVAADLLALTLLTPPGE---M---GADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSM--PGRIV 297 (954)
T ss_pred HHHHHcCCEEEEEehhhhccCCCChhh---c---CCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhC--CCCee
Confidence 999999999999996644333332211 2 459999999999 4444 6999999753 22211 12223
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccH-----HHHHHHHHHhhHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRA-----LKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~g~~~~~~ 256 (367)
+..... .....|.+. +. .+. +.++ +....++-... .....++..+|.+|++++.+
T Consensus 298 G~s~d~--~g~~~~~la-------------lq--tRe--qhiR-rekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~ 357 (954)
T PRK05367 298 GVSVDA--AGNPALRLA-------------LQ--TRE--QHIR-REKATSNICTAQVLLAVMASMYAVYHGPEGLKAIAR 357 (954)
T ss_pred eeeccc--CCCcccccc-------------cc--ccc--cccc-ccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 221100 011112000 00 000 0000 11111111111 12222345679999999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHH
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ed 336 (367)
+...+++|+.++|++ .|+++..++.+..++++++. ...++.++|.++|+.. . . .....+|+|+ +.++|++|
T Consensus 358 ~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~~~~~---~~~~i~~~l~~~gi~~-~--~-~~~~~l~is~-~e~~t~~d 428 (954)
T PRK05367 358 RVHRLAAILAAGLRA-LGLEVVHDSFFDTLTVEVGG---DAAAVLARALAAGINL-R--R-VDDDHVGISL-DETTTRED 428 (954)
T ss_pred HHHHHHHHHHHHHHh-cCcccCCCCCCCeEEEeCCC---CHHHHHHHHHHCCcee-c--c-ccCCEEEEEe-cccCCHHH
Confidence 999999999999987 58998877777888888642 3678999999999542 1 1 1234799976 68899999
Q ss_pred HHHHHHHHH
Q psy3048 337 VAFAWNEIS 345 (367)
Q Consensus 337 id~li~~l~ 345 (367)
||+++++|.
T Consensus 429 id~l~~~l~ 437 (954)
T PRK05367 429 LAALLAVFG 437 (954)
T ss_pred HHHHHHHHc
Confidence 999999997
No 100
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.74 E-value=6.7e-16 Score=147.20 Aligned_cols=253 Identities=17% Similarity=0.085 Sum_probs=164.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-+|++++..|.+...++...|++++.++. +|+++|++++++... ....++++.++.+++|.+.|+++|.++|+
T Consensus 101 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l~~ 173 (360)
T TIGR00858 101 DLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRG--ERRKLIVTDGVFSMDGDIAPLPQLVALAE 173 (360)
T ss_pred CEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHccc--CCCeEEEEeCCccCCCCCcCHHHHHHHHH
Confidence 35677889999999999999999988764 489999999875420 11357777778889999999999999999
Q ss_pred hcCcEEEEecccccccccCh-hhhhhhCCC--CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLP-EYAHLKRGL--EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++|+++++|++|+.+.+... .......++ ...|++..+.+|+++. .| |+++.+ ++...........+....
T Consensus 174 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~g-G~~~~~-~~~~~~~~~~~~~~~~~~--- 247 (360)
T TIGR00858 174 RYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YG-AYVAGS-QALIDYLINRARTLIFST--- 247 (360)
T ss_pred HcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cC-cEEEcC-HHHHHHHHHhCccceecC---
Confidence 99999999999975543211 000111122 1348888999999975 44 666553 333322110011110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
....+...++.++++.+. ..++..++..++.+++.+
T Consensus 248 ------------------------------------------~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~ 283 (360)
T TIGR00858 248 ------------------------------------------ALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRA 283 (360)
T ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHH
Confidence 000011123334444322 235667888999999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ ++++. ++..+.+++.++. .....++.++|.++|+ ++.+.. ..+..++|+++ +.+++++|+++++++
T Consensus 284 ~L~~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~gI-~v~~~~~~~~~~~~~~iRis~-~~~~~~~~i~~~l~~ 358 (360)
T TIGR00858 284 GLEAL-GFTLM-PSCTPIVPVIIGD-NASALALAEELQQQGI-FVGAIRPPTVPAGTSRLRLTL-SAAHTPGDIDRLAEA 358 (360)
T ss_pred HHHHc-CCccC-CCCCCEEEEEeCC-HHHHHHHHHHHHHCCe-eEeeeCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHh
Confidence 99886 67654 4456677777653 2335688999988874 443321 12346899976 567889999999988
Q ss_pred HH
Q psy3048 344 IS 345 (367)
Q Consensus 344 l~ 345 (367)
|+
T Consensus 359 l~ 360 (360)
T TIGR00858 359 LK 360 (360)
T ss_pred hC
Confidence 74
No 101
>PRK07324 transaminase; Validated
Probab=99.74 E-value=8.1e-16 Score=147.71 Aligned_cols=257 Identities=12% Similarity=0.031 Sum_probs=162.7
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|+++..+|.++...++..|++++.++.+. ++.+|+++|++++.+.+ .++++++++|+||.+.+ +++|+
T Consensus 106 ~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~------kli~i~~p~NPtG~~~~~~~l~~i~ 179 (373)
T PRK07324 106 HVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNT------KLICINNANNPTGALMDRAYLEEIV 179 (373)
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCC------cEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 466678889888888999999999999863 46789999998886655 48889999999999977 89999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++|++||+++++|++|....... ..... .....-.+.+.+..|.++. ...+|+++. +++.+...... ..+.
T Consensus 180 ~~a~~~~~~ii~De~y~~l~~~~-~~~s~-~~~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~-~~~~---- 251 (373)
T PRK07324 180 EIARSVDAYVLSDEVYRPLDEDG-STPSI-ADLYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKY-RDYT---- 251 (373)
T ss_pred HHHHHCCCEEEEEccccccccCC-CCCCh-hhccCCEEEEecchhhcCCccceeEEEec-CHHHHHHHHHH-hCcE----
Confidence 99999999999999987643321 11110 0111113556678998874 456788877 33333322110 0000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
..+...+.......++.. ...-+++..+...+..+.+
T Consensus 252 ------------------------------------------~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l 288 (373)
T PRK07324 252 ------------------------------------------MICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAIL 288 (373)
T ss_pred ------------------------------------------EecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Confidence 000000111111122221 1223444455556677778
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.+.|++++++....|.......++++. .....++.++|.+ .|+ .+.++ .+..++++|+++.. +++.++..++.
T Consensus 289 ~~~l~~~~~~~~~~p~gg~~~~i~~~~-~~~~~~~~~~ll~~~gv-~v~pg~~F~~~~~iRis~~~---~~~~l~~~l~r 363 (373)
T PRK07324 289 DEWVAKEPRVSYVKPKAVSTSFVKLDV-DMPSEDFCLKLLKETGV-LLVPGNRFDLEGHVRIGYCC---DTETLKKGLKK 363 (373)
T ss_pred HHHHhcCCCceEECCCceEEEEEEeCC-CCCHHHHHHHHHHhcCE-EEECccccCCCCeEEEEecC---CHHHHHHHHHH
Confidence 888888778877655443444455543 2235678888764 464 44443 33445699997743 58889999999
Q ss_pred HHHHHHH
Q psy3048 344 ISHQSSE 350 (367)
Q Consensus 344 l~~~~~~ 350 (367)
|++++++
T Consensus 364 l~~~l~~ 370 (373)
T PRK07324 364 LSEFLRE 370 (373)
T ss_pred HHHHHHh
Confidence 8888764
No 102
>KOG1359|consensus
Probab=99.74 E-value=2.7e-16 Score=138.63 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=172.7
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+.-.||.++.+|.|+.+++++.. ..+..|+-+|+..+.+..+.. ..+|+....-++.|.+.|+++|.++
T Consensus 150 pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~L 218 (417)
T KOG1359|consen 150 PEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQL 218 (417)
T ss_pred hhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHH
Confidence 45667888899999888877653 346678899998888766532 2456666666788999999999999
Q ss_pred HhhcCcEEEEecccccccccC-hhh-hhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhc-cCCccccccCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLL-PEY-AHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTF-FTDRVYLKHTD 185 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~-~~~~~yl~~~~ 185 (367)
+++||.++++|+||+.+.+-- ... ...+.-..++|++.....|.+++. ..-|+..+..+...+ +...+|+++..
T Consensus 219 a~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga---~GGyttgp~~li~llrqr~RpylFSns 295 (417)
T KOG1359|consen 219 AKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA---SGGYTTGPKPLISLLRQRSRPYLFSNS 295 (417)
T ss_pred HHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC---CCCCccCChhHHHHHHhcCCceeecCC
Confidence 999999999999998876532 111 111122356799999999998843 222333333333333 56788888763
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
- .+.. .. .+.+.+..+. .-.+...+...+.+++
T Consensus 296 l-----ppav----------------V~---------------------~a~ka~dllm-----~s~~~i~~~~a~~qrf 328 (417)
T KOG1359|consen 296 L-----PPAV----------------VG---------------------MAAKAYDLLM-----VSSKEIQSRQANTQRF 328 (417)
T ss_pred C-----Chhh----------------hh---------------------hhHHHHHHHH-----hhHHHHHHHHHHHHHH
Confidence 2 1000 00 1122222221 1244555778888999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEE---EeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII---KASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++.++.- ||.+.... +.++-.+.++.+.+..+.+.|+++|++.+. |..+.+...+|+.++..+ ++||||++++
T Consensus 329 r~~me~a-GftIsg~~--hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaH-t~edid~~i~ 404 (417)
T KOG1359|consen 329 REFMEAA-GFTISGAS--HPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAH-TEEDIDRLIE 404 (417)
T ss_pred HHHHHhc-CceecCCC--CCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhc-CHHHHHHHHH
Confidence 9988774 99987643 222222335466777899999999966554 345578889999886555 5999999999
Q ss_pred HHHHHHHHh
Q psy3048 343 EISHQSSEM 351 (367)
Q Consensus 343 ~l~~~~~~~ 351 (367)
++.++++-.
T Consensus 405 Af~~vgr~~ 413 (417)
T KOG1359|consen 405 AFSEVGRFL 413 (417)
T ss_pred HHHHHHHhh
Confidence 999987643
No 103
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=2.5e-16 Score=151.46 Aligned_cols=276 Identities=12% Similarity=0.069 Sum_probs=173.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|++++.+|.+...++...|++++.++.+. ++.+|+++|++++.+.++ +|+.+ +++|...|+++|.++
T Consensus 73 Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tk------av~~~---~~~G~~~d~~~i~~~ 143 (379)
T PRK11658 73 GDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTK------AIIPV---HYAGAPADLDAIRAI 143 (379)
T ss_pred CCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCe------EEEEe---CCCCCcCCHHHHHHH
Confidence 34577888999999999999999999999874 467999999999977653 55544 458999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|++||+++++|+||+.+....+.. .... ..++++++.+|++.++ ..|+++..+++...+... +...+..
T Consensus 144 a~~~gi~vi~D~a~a~g~~~~~~~---~g~~-g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~----~~~~G~~-- 212 (379)
T PRK11658 144 GERYGIPVIEDAAHAVGTYYKGRH---IGAR-GTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRS----LKFHGLG-- 212 (379)
T ss_pred HHHcCCeEEEECCCccCCeECCee---cCCC-CCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHH----HHHcCCC--
Confidence 999999999999998654432211 1112 2378999999999764 344555555554433211 0001100
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
...+. .+ .+ ...+. .. ....+-++....+.+++.....++++++.++.+++++++.+.
T Consensus 213 ---~~~~~--~~------~~------~~~~~----~~-~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~ 270 (379)
T PRK11658 213 ---VDAFD--RQ------TQ------GRAPQ----AE-VLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQA 270 (379)
T ss_pred ---cchhh--hh------cc------cCCCc----ce-eeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00 00 00000 00 001122234456777888888889999999999999999999
Q ss_pred hcCCCCeEEeCCCC-----ceeEEEEEcCC--chHHHHHHHHHhccCcEE---EEEeEE----C--------------Ce
Q psy3048 269 VEKDDRFELVCPPS-----MGLVCFRLKGD--NDLTNQLYERLMSHKQIY---IIKASF----Q--------------GR 320 (367)
Q Consensus 269 L~~~~g~~~~~~~~-----~~~v~f~~~~~--~~~~~~l~~~L~~~g~~~---~~~~~~----~--------------~~ 320 (367)
|++++...+..+.. .....++++.. ....+++.+.|.++|+.. ..+... . ..
T Consensus 271 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 350 (379)
T PRK11658 271 LADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSE 350 (379)
T ss_pred hcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHh
Confidence 99886433322211 13445555421 123568888898887421 001000 0 01
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
..+-+ +.++..+++|+++++++|+++.
T Consensus 351 ~~l~l-P~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 351 RICSL-PLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CeEEc-cCCCCCCHHHHHHHHHHHHHHH
Confidence 23444 4577889999999999999864
No 104
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.73 E-value=6e-16 Score=149.49 Aligned_cols=261 Identities=12% Similarity=0.045 Sum_probs=165.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.-.|++++..+......++..|++++.++.++++.+|+++|++++++.+ .+|++++++|+||.+.| +++|+
T Consensus 113 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------klv~~~~p~NPtG~~~~~~~~~~i~ 186 (389)
T PRK05957 113 GDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKT------RAIVTISPNNPTGVVYPEALLRAVN 186 (389)
T ss_pred CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCc------eEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 3456667777777777777889999999988788999999999987655 47788899999999976 89999
Q ss_pred HHHhhcCcEEEEecccccccccChhh-hh-hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEY-AH-LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++||+++++|++|+-..+..... .. ...+...-.+++.+..|.++.| ..+|+++... ..++..... ..+...
T Consensus 187 ~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~-~~~~~~ 264 (389)
T PRK05957 187 QICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI-HLLEAIKKI-QDTILI 264 (389)
T ss_pred HHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH-HHHHHHHHH-Hhhccc
Confidence 99999999999999997554321111 10 0111111236667788988533 4589988743 323221100 000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLRKHISL 261 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~~~~~l 261 (367)
. .. .+...++...+ +...+++..++..+.
T Consensus 265 ~----------------------------------------------~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 295 (389)
T PRK05957 265 C----------------------------------------------PP---VVSQYAALGALQVGKSYCQQHLPEIAQV 295 (389)
T ss_pred C----------------------------------------------CC---cHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 0 00 01222222222 223456666777888
Q ss_pred HHHHHHHhcCCCCeEEeCCCCce-eEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEE---CCeeEEEEEecCCCCCHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMG-LVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASF---QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~---~~~~~lRi~~~~~~~~~ed 336 (367)
.+++.+.|++++++..+.++..+ .++++++. .....++.+.|.+ +|+ .+.++.. .+.+++|+++.. .++++
T Consensus 296 r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~-~~~~~~~~~~l~~~~gv-~v~pg~~f~~~~~~~iRis~~~--~~~~~ 371 (389)
T PRK05957 296 RQILLKSLGQLQDRCTLHPANGAFYCFLKVNT-DLNDFELVKQLIREYRV-AVIPGTTFGMKNGCYLRIAYGA--LQKAT 371 (389)
T ss_pred HHHHHHHHHhcCCCccccCCCeeEEEEEeCCC-CCChHHHHHHHHHHCCE-EEccchhhCCCCCCEEEEEEec--CCHHH
Confidence 88899999888774223344433 34455543 2335688888875 564 4554432 224589998743 36888
Q ss_pred HHHHHHHHHHHHHHh
Q psy3048 337 VAFAWNEISHQSSEM 351 (367)
Q Consensus 337 id~li~~l~~~~~~~ 351 (367)
++..++.|.+.++++
T Consensus 372 l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 372 AKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888888877654
No 105
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=6.3e-16 Score=157.20 Aligned_cols=137 Identities=21% Similarity=0.187 Sum_probs=109.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-----CCCcC-----HHHHHHHHHHHh--h--CCCccEEEEEecCCCc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-----NGVLR-----GDALLTAVKEDL--A--KGLIPCCLVATLGTTG 95 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-----~~~~d-----~~~L~~~l~~~~--~--~~~~~~~vv~~~~~t~ 95 (367)
.-.|++++++|.|+..++.+.|+.++++++.. -+.++ ++.+++++++.. + ++.+|..++++++ |+
T Consensus 245 gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY 323 (755)
T PRK15029 245 NDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TY 323 (755)
T ss_pred CCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CC
Confidence 44788899999999999999999999997641 14455 999999997643 2 3345667888876 77
Q ss_pred ccccCChhhHHHHHhhcCcEEEEecccccccccChhhhh--hhC----CCCCcc-eeeeccccccccCCcceeEEEecc
Q psy3048 96 TCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKR----GLEYVD-SFAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 96 ~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~----~~~~~D-~~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
.|.+.|+++|+++||++|++++||+|||+...+.+.++. .+. ....+| +++-|.||.+.+-.+++++.+++.
T Consensus 324 ~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 324 DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred cceeeCHHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 999999999999999999999999999998877765542 110 102468 889999999999999999999654
No 106
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.73 E-value=2.5e-16 Score=151.16 Aligned_cols=244 Identities=16% Similarity=0.161 Sum_probs=165.4
Q ss_pred EEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+.... +...|++++.++.+ |++++++++++++ .+|++++++|++|.+.|+++|++
T Consensus 87 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~~~le~~i~~~t------klv~le~psnptg~v~dl~~I~~ 155 (378)
T TIGR01329 87 EIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-----DLDKVKAALGPKT------KLVLLESPTNPLQKIVDIRKISE 155 (378)
T ss_pred EEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCeeecHHHHHH
Confidence 466677788776543 44579999999864 8999999997655 48899999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|++++||++|+.+.... ... . .+|++++++|||+++|.+ .|+++++++...++.. .+.....
T Consensus 156 la~~~g~~vivD~a~~~~~~~~-~l~---~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~----~~~~~~G 224 (378)
T TIGR01329 156 MAHAQNALVVVDNTMMSPLLCN-PLE---L---GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY----FLQNSTG 224 (378)
T ss_pred HHHHcCCEEEEECCCcccccCC-hhh---c---CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH----HHHHhcC
Confidence 9999999999999997654322 111 1 359999999999999877 8888886654333221 0110000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. ....+..| +...+.+.+..++++..+++..+
T Consensus 225 ~----------------------------------------------~~~~~~a~--l~~~~l~tl~~R~e~~~~na~~l 256 (378)
T TIGR01329 225 S----------------------------------------------GLAPFDCW--LLLRGIKTLAIRIEKQQENARAI 256 (378)
T ss_pred C----------------------------------------------cCCHHHHH--HHHccCCCHHHHHHHHHHHHHHH
Confidence 0 00112222 22335566788888899999999
Q ss_pred HHHhcCCCCe-EEeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccCcE---------EEEEe--EE
Q psy3048 266 ADLVEKDDRF-ELVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHKQI---------YIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~-~~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g~~---------~~~~~--~~ 317 (367)
.+.|+++|.+ ++..| | ..++++|.+.+ .....++.+.|...+.. ...|. .+
T Consensus 257 a~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~ 335 (378)
T TIGR01329 257 AMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSH 335 (378)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHHHHHhCcCcccccCCCCCCceeeCCCcccc
Confidence 9999988876 33433 1 23789999943 33356788887543311 11111 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
. ..+.+|+|+. -||++.+++.|++.++++
T Consensus 336 ~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 336 ASIPAEVREERGLPEDLVRLSVG-----IEDVDDLISDLDIAFVTA 376 (378)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhc
Confidence 0 1468999874 368999999999988754
No 107
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.73 E-value=4.8e-16 Score=148.73 Aligned_cols=269 Identities=14% Similarity=0.082 Sum_probs=168.8
Q ss_pred cCceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 28 KSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.+.-.|+++..+..+...++...|+++++++++ +++.+|++++++++.+.++ .|+++| ..|...|+++|.
T Consensus 63 ~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~~i~ 133 (363)
T PF01041_consen 63 GPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTK------AILVVH---LFGNPADMDAIR 133 (363)
T ss_dssp GTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHH
T ss_pred CcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHHHHH
Confidence 345678888999999999999999999999998 7899999999999998884 666664 479999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|+++|++++.|+||+.+....+..-. ..+.+-++++...|.+.++ ..|++++++++..++.......-.....
T Consensus 134 ~~~~~~~i~lIeD~a~a~g~~~~g~~~G---~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~- 208 (363)
T PF01041_consen 134 AIARKHGIPLIEDAAQAFGARYKGRPVG---SFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDA- 208 (363)
T ss_dssp HHHHHTT-EEEEE-TTTTT-EETTEETT---SSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSE-
T ss_pred HHHHHcCCcEEEccccccCceeCCEecc---CCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccc-
Confidence 9999999999999999887654322111 1222344455556998554 4577888776654443211100000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
...| ......+.++++-.+.+++...+.+.++++.++.+++++++.
T Consensus 209 -----~~~~-----------------------------~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~ 254 (363)
T PF01041_consen 209 -----FRRY-----------------------------RHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYR 254 (363)
T ss_dssp -----CSTT-----------------------------EESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred -----cccc-----------------------------cccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 0000 000002233445566666666677788999999999999999
Q ss_pred HHhcCCCCeEEeCCC-C-----ceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEe---------------EEC------
Q psy3048 267 DLVEKDDRFELVCPP-S-----MGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKA---------------SFQ------ 318 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-~-----~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~---------------~~~------ 318 (367)
+.|..++++..+..+ . ...+.+.+++.. ...+++.+.|.++|+-..... ...
T Consensus 255 ~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~a 334 (363)
T PF01041_consen 255 EALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNA 334 (363)
T ss_dssp HHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHH
T ss_pred HHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHH
Confidence 999999998776532 1 223455565421 135689999998884321100 001
Q ss_pred ---CeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 319 ---GRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 319 ---~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
....+-+ +.++..+++|+++++++|+
T Consensus 335 e~l~~r~l~L-P~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 335 ERLSQRLLSL-PIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHEEEE-EHSTTSCHHHHHHHHHHHH
T ss_pred HHHHhCeEEC-cCCCCCCHHHHHHHhhccC
Confidence 0225666 6788999999999999875
No 108
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.73 E-value=2.1e-17 Score=153.63 Aligned_cols=133 Identities=17% Similarity=0.084 Sum_probs=104.2
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCC------CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN------GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~------~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
+.-.|++++.+|.|+..++...|+++++++++.+ +.+|+++|++++++..+ +.+|+++++ |++|.+.|+
T Consensus 98 ~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~----~k~v~l~~p-~~~G~~~dl 172 (294)
T cd00615 98 PGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPD----AKAAVITNP-TYYGICYNL 172 (294)
T ss_pred CCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCC----ceEEEEECC-CCCCEecCH
Confidence 3457778899999999999999999999987522 47999999999976332 457778876 789999999
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
++|+++||++|++++||+||+++..+.+..+.... ...+|+++.++||++.++.++|++++++.
T Consensus 173 ~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 173 RKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred HHHHHHHHhcCCeEEEECcchhhhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCC
Confidence 99999999999999999999875433332211111 12469999999999988888888888654
No 109
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-15 Score=148.11 Aligned_cols=263 Identities=10% Similarity=0.035 Sum_probs=169.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-----CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-----DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN--- 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-----~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d--- 101 (367)
.-.|++.+.++......++..|++++.|+++ +++.+|+++|++++++.+ .+|++++++|+||.+.+
T Consensus 126 Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~~~s~e~ 199 (405)
T PRK06207 126 GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGV------RVFLFSNPNNPAGVVYSAEE 199 (405)
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcC------eEEEECCCCCCCCcCCCHHH
Confidence 3456667789988888899999999999875 258899999999987655 47889999999999965
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccChhhhhhhC-CC-CCcceeeeccccccccC-CcceeEEEecchhhhhhccCCc
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR-GL-EYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
+++|+++|++||+++++|++|+-..+.......... .. ..--+++.+..|.++.| ..+|+++.. +..........
T Consensus 200 l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~~~~~~~~- 277 (405)
T PRK06207 200 IAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAIIDRMEKLQ- 277 (405)
T ss_pred HHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHHHHHHHHH-
Confidence 788899999999999999999865442211110000 01 01126777789999844 558888753 33332211000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
.+.... ...+....+..++.. +...+++..++.
T Consensus 278 ~~~~~~----------------------------------------------~~~~~q~a~~~~l~~-~~~~~~~~~~~~ 310 (405)
T PRK06207 278 AIVSLR----------------------------------------------AAGYSQAVLRTWFSE-PDGWMKDRIARH 310 (405)
T ss_pred hHhccC----------------------------------------------CCHHHHHHHHHHHhC-cHHHHHHHHHHH
Confidence 000000 000111222222221 223356677777
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-E--CCeeEEEEEecCCCCCH
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-F--QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~ 334 (367)
.+.++++.+.|++++++.+..|.....++++++.......++.+.|. +.|+ .+.++. + .+.+++|+++.. +.
T Consensus 311 ~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV-~v~pG~~F~~~~~~~~Ris~~~---~~ 386 (405)
T PRK06207 311 QAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGV-IVTPGTEFSPHTADSIRLNFSQ---DH 386 (405)
T ss_pred HHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCE-EEeCchHhCCCCCCeEEEEecC---CH
Confidence 78888899999888787765444455666676532223567888887 4564 444433 2 235699998753 58
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3048 335 CDVAFAWNEISHQSSEM 351 (367)
Q Consensus 335 edid~li~~l~~~~~~~ 351 (367)
++++..++.|.+++++.
T Consensus 387 ~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 387 AAAVAAAERIAQLIERY 403 (405)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999887654
No 110
>PRK05968 hypothetical protein; Provisional
Probab=99.72 E-value=5.6e-16 Score=149.32 Aligned_cols=243 Identities=17% Similarity=0.209 Sum_probs=160.0
Q ss_pred EEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+.. ..+...|+++++++.+ |++++++++ +.+ .+|.+.+++++++.+.|+++|.+
T Consensus 104 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~ 171 (389)
T PRK05968 104 RIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-----DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAA 171 (389)
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-----CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHH
Confidence 3555666777643 4555679999998754 889999887 334 37888889999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||+||+++++|++|+.+....+ . ..+ +|+++.+++|++.+|.+ .|+++ .+++.+++......++++..
T Consensus 172 la~~~gi~vivD~a~a~~~~~~p-~---~~g---~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~~- 242 (389)
T PRK05968 172 LAKRHGVVTMIDNSWASPVFQRP-I---TLG---VDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGAK- 242 (389)
T ss_pred HHHHcCCEEEEECCCcchhccCc-h---hcC---CcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCCC-
Confidence 99999999999999976543221 1 123 49999999999998865 45555 44443332211000111100
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
...+..+.. ..+.+.+..++++..++++++
T Consensus 243 ------------------------------------------------~~~~~A~~~--l~~L~tl~~r~~~~~~~a~~l 272 (389)
T PRK05968 243 ------------------------------------------------LSPFEAWLL--LRGLRTLPLRMKAHEASALEI 272 (389)
T ss_pred ------------------------------------------------CChHHHHHH--HcccCcHHHHHHHHHHHHHHH
Confidence 011222322 334556788889999999999
Q ss_pred HHHhcCCCCeEEeCCC------------CceeEEEEEcCCchHHHHHHHHHhccCcEE--------EEEeE---------
Q psy3048 266 ADLVEKDDRFELVCPP------------SMGLVCFRLKGDNDLTNQLYERLMSHKQIY--------IIKAS--------- 316 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~--------~~~~~--------- 316 (367)
.+.|+++|++..+..| ..++++|.+.+ .....++.++|...+... +.|..
T Consensus 273 a~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~ 351 (389)
T PRK05968 273 ARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQP 351 (389)
T ss_pred HHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCH
Confidence 9999999998655422 13599999874 344567888876544110 11210
Q ss_pred ----ECC--eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 ----FQG--RPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 ----~~~--~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..| ++.+|+|+. . ||.+.+++.|++.++++
T Consensus 352 ~~~~~~gi~~~liR~SvG-l----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 352 NSAARFGVSPRSVRLHVG-L----EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHhcCCCCCeEEEEec-c----CCHHHHHHHHHHHHHHh
Confidence 011 468999874 3 56777888888877654
No 111
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.72 E-value=9.2e-16 Score=147.77 Aligned_cols=260 Identities=12% Similarity=0.067 Sum_probs=162.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
-.|++++.++......+...|++++.++.+. ++.+|+++|++++.+.+ .++++++++|++|.+ +++++
T Consensus 108 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~ 181 (380)
T PRK06225 108 DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENT------RLIYLIDPLNPLGSSYTEEEIKE 181 (380)
T ss_pred CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCc------eEEEEeCCCCCCCcCCCHHHHHH
Confidence 3466677788877788888999999998632 46899999999887654 377778899999997 45999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
|+++|++||+++++|++++.+......... .. ....+...+.+|+++.| ..+|+++.++ ..+..... +..
T Consensus 182 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~--~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~~~~~~----~~~- 252 (380)
T PRK06225 182 FAEIARDNDAFLLHDCTYRDFAREHTLAAE-YA--PEHTVTSYSFSKIFGMAGLRIGAVVATP-DLIEVVKS----IVI- 252 (380)
T ss_pred HHHHHHHCCcEEEEehhHHHHhccCCchhh-cC--CCCEEEEeechhhcCCccceeEEEecCH-HHHHHHHH----HHh-
Confidence 999999999999999998643211110000 00 12245666778999533 3478888743 33322110 000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
.. + . ............+.. ..+.+++..+...+..+
T Consensus 253 ~~---------~-------------------------------~---~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~ 288 (380)
T PRK06225 253 ND---------L-------------------------------G---TNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQK 288 (380)
T ss_pred cc---------c-------------------------------C---CCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHH
Confidence 00 0 0 000111112222222 12223444444556677
Q ss_pred HHHHHhcCCCCeEEe-CCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELV-CPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|++++|+.+. .++..+.+.+.+........++.++|.++|+ .+.++.. .+..++|+++.. ++++++
T Consensus 289 ~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi-~v~~g~~~~~~~~~~~iR~s~~~---~~e~l~ 364 (380)
T PRK06225 289 LIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKI-FVRQGTYTSKRFGDRYIRVSFSI---PREQVE 364 (380)
T ss_pred HHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCE-EEcCCcccCcCCCCceEEEEeCC---CHHHHH
Confidence 788888887775432 3445566666664322335688988988884 4444322 235699997642 689999
Q ss_pred HHHHHHHHHHHHhhC
Q psy3048 339 FAWNEISHQSSEMNL 353 (367)
Q Consensus 339 ~li~~l~~~~~~~~~ 353 (367)
++++.|++++++++.
T Consensus 365 ~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 365 VFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999887654
No 112
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.72 E-value=1.1e-15 Score=146.15 Aligned_cols=244 Identities=13% Similarity=0.090 Sum_probs=157.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++..+..+...++..|++++.++.++++.+|+++|++++.+.+ .++++++++|++|.+.|.++|.++|+
T Consensus 112 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~ 185 (361)
T PRK00950 112 DEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILE 185 (361)
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 356667777767777788899999999987778999999999886544 37777899999999999999999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
++|+++++|++|+.+. ............. -++..+..|.++.| ..+|+++... ............
T Consensus 186 ~~~~~li~De~y~~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~---------- 251 (361)
T PRK00950 186 STDALVFVDEAYVEFA--EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPE-WLIDYYMRAKTP---------- 251 (361)
T ss_pred HCCcEEEEECchhhhC--ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCH-HHHHHHHHhcCC----------
Confidence 9999999999997543 1111111111111 25556789988744 4577776532 222211100000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHH
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~la~~l~~~ 268 (367)
+ . ...+....++..+.. +.+++..++..+..+++.+.
T Consensus 252 -----~-------------------------------~------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~ 289 (361)
T PRK00950 252 -----F-------------------------------S------LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNE 289 (361)
T ss_pred -----C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 0 001222223333322 23566666666677777666
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-eEE--CCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-ASF--QGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~--~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
|. +.+ .++..+.+++++.+ ....++.+.|.++|+ .+.+ ..+ .++.++|+++. +.+|+++++++|+
T Consensus 290 l~----~~~-~~~~~~~i~~~~~~--~~~~~~~~~l~~~gv-~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~ 357 (361)
T PRK00950 290 LP----FKV-YPSEANFVLVDVTP--MTAKEFCEELLKRGV-IVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILK 357 (361)
T ss_pred cC----eeE-CCCcceEEEEECCC--CCHHHHHHHHHHCCE-EEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHH
Confidence 65 444 34556667777632 346789999988884 4433 222 23568999764 5789999999999
Q ss_pred HHH
Q psy3048 346 HQS 348 (367)
Q Consensus 346 ~~~ 348 (367)
+++
T Consensus 358 ~il 360 (361)
T PRK00950 358 EIV 360 (361)
T ss_pred HHh
Confidence 875
No 113
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.72 E-value=5.9e-16 Score=161.47 Aligned_cols=260 Identities=11% Similarity=0.018 Sum_probs=166.8
Q ss_pred ceEEEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++..|.+....++ -.|++++.++.+.. + ...+. +..++++..+.+|.+.|+++|
T Consensus 192 ~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~~-------v~~vlvq~P~~~G~v~dv~~I 255 (993)
T PLN02414 192 KKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSGD-------VCGVLVQYPATDGEVLDYAEF 255 (993)
T ss_pred CCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccCc-------eEEEEEecCCCCeEEcCHHHH
Confidence 3568889999999876654 36899999987421 1 11111 233335455679999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-----ceeEEEecchhhhhhccCCccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-----CSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-----~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+++||++|++++| +|+..+...... .... .||+++.++|||+ +|.| +|++++++.. .+.+. +..
T Consensus 256 ~~~ah~~GaL~iV-aad~lal~~l~~--pge~---GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~--~r~~P--gri 324 (993)
T PLN02414 256 VKNAHANGVKVVM-ATDLLALTMLKP--PGEW---GADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY--KRLMP--GRI 324 (993)
T ss_pred HHHHHHcCCEEEE-EECHHHhcCCCC--Hhhc---cCcEEEECCCccc-cCCCCCCCCeeEEEECHHH--HhhCC--Ccc
Confidence 9999999999999 888776655421 1111 4599999999998 3444 8999997642 22111 122
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHH-----HHhhHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTL-----RSYGLKGLQAYL 255 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~g~~~~~ 255 (367)
++..... .....|.+ .+. .+... ..+....++-....++.+.+ ..+|..|++++.
T Consensus 325 VG~s~d~--~g~~~~~l-------------~Lq--tReqh---iRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia 384 (993)
T PLN02414 325 IGVSVDS--SGKPALRM-------------AMQ--TREQH---IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 384 (993)
T ss_pred cCcccCC--CCCccccc-------------ccc--cccch---hhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 2221110 00111100 000 00000 01111112211222333333 356889999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
++..+++.|++++|.+. |+++..++.+.+++|+++. +.++.++|.++|+ .+... . ...+|+|+ +.++|++
T Consensus 385 ~ri~~la~~l~~~L~~~-G~~~~~~~~f~~vt~~~~~----~~~v~~~L~~~gI-~l~~~--~-~~~lrvs~-~e~~T~e 454 (993)
T PLN02414 385 QRVHGLAGVFAAGLKKL-GFQVQSLPFFDTVKVKCSD----ADAIADAAAKVGI-NLRVV--D-ANTVTVSF-DETTTLE 454 (993)
T ss_pred HHHHHHHHHHHHHHhhc-CCccCCCCCcCeEEEecCC----HHHHHHHHHHCCC-eeEEe--c-CCeEEEEe-eccCCHH
Confidence 99999999999999884 8998878888999998742 4789999999985 33221 1 34699976 7899999
Q ss_pred HHHHHHHHHHH
Q psy3048 336 DVAFAWNEISH 346 (367)
Q Consensus 336 did~li~~l~~ 346 (367)
|||+|+++|..
T Consensus 455 dId~L~~~l~~ 465 (993)
T PLN02414 455 DVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHcc
Confidence 99999999964
No 114
>PLN02509 cystathionine beta-lyase
Probab=99.72 E-value=8.2e-16 Score=150.09 Aligned_cols=242 Identities=14% Similarity=0.199 Sum_probs=162.0
Q ss_pred EEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+... .+...|++++.++.. |++++++++++.+ .+|++++++|++|.+.|+++|++
T Consensus 173 ~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~-----d~e~l~~ai~~~T------klV~lesPsNPtG~i~Dl~~I~~ 241 (464)
T PLN02509 173 EIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----NLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIAE 241 (464)
T ss_pred EEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC-----CHHHHHHhCCcCC------eEEEEECCCCCCCCHHHHHHHHH
Confidence 45567788887653 344578988888643 7899999997665 48899999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||+||+++++|++|+.+.+..+ . + ..+|+++++++||+.++.+ .|+++++++....+.. .+...
T Consensus 242 lAk~~g~~lIVD~A~a~~~~~~p-l-----~-~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~-----~~~~~- 308 (464)
T PLN02509 242 MAHAQGALVLVDNSIMSPVLSRP-L-----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-----FLQNS- 308 (464)
T ss_pred HHHHcCCEEEEECCccccccCCh-h-----h-cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHH-----HHHHh-
Confidence 99999999999999977654221 1 1 1469999999999998876 6777765543222110 00000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. +..+..+..|.. ..+.+-+..++++..++++++
T Consensus 309 ~--------------------------------------------g~~l~p~~A~l~--lr~L~tL~~R~~r~~~nA~~l 342 (464)
T PLN02509 309 E--------------------------------------------GSGLAPFDCWLC--LRGIKTMALRIEKQQENARKI 342 (464)
T ss_pred c--------------------------------------------CCCcCHHHHHHH--HhhhhhHHHHHHHHHHHHHHH
Confidence 0 000112333333 335667788999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~ 317 (367)
.+.|+++|.++ +..| | ..++++|.+. ..+....+.+.|.-- + .....|. .+
T Consensus 343 a~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh 421 (464)
T PLN02509 343 AMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_pred HHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-CHHHHHHHHHcCCcceEcccCCCCCceeeCCccccc
Confidence 99999999874 5544 1 2468899883 234445666655411 1 0011111 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
. ..+.+|+|+. -||++.+++.|++.++
T Consensus 422 ~~~~~~~~~~~Gi~~~liRlSvG-----lE~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 422 ASIPAEVREARGLTEDLVRISAG-----IEDVDDLISDLDIAFR 460 (464)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHc
Confidence 1 1468999774 3689999999988865
No 115
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.72 E-value=1.6e-15 Score=148.09 Aligned_cols=269 Identities=10% Similarity=0.028 Sum_probs=171.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++++.++..+...+...|++++.+++. +++.+|+++|++++++.+ .++++++++|+||.+.| +++|
T Consensus 142 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~~~~~l~~i 215 (430)
T PLN00145 142 ANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVYSYEHLAKI 215 (430)
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCCCHHHHHHH
Confidence 357777888888888888899999998863 468899999999887765 48889999999999976 8889
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeecccccc-ccCCcceeEEEecchh-hhhh--ccCCcc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKWL-LTNHDCSAMWVKNANH-LTNT--FFTDRV 179 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l-~~p~g~g~l~~~~~~~-~~~~--~~~~~~ 179 (367)
+++|++||+++++|++|+.+.+....+... +... .--+...+..|.+ .....+|+++..++.. +... ......
T Consensus 216 ~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~ 294 (430)
T PLN00145 216 AETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEV-APVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRN 294 (430)
T ss_pred HHHHHHcCCEEEEeccchhhccCCCCccchhhhccc-CcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHH
Confidence 999999999999999997654422111110 1111 1135555678884 4448899988754322 1110 000000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+.... .....+.+.++...|+.-..+.+++..++.+
T Consensus 295 ~~~~~--------------------------------------------~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~ 330 (430)
T PLN00145 295 YLNIS--------------------------------------------TDPATFVQGAIPQIIANTKEEFFTKTLGLLK 330 (430)
T ss_pred Hhccc--------------------------------------------CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 00000 0000011122223333212345777788888
Q ss_pred HHHHHHHHHhcCCCCeEEeC-CCCceeEEEEEcCC---c-hHHHHHHHHHhccCcEEEEE-eEECCeeEEEEEecCCCCC
Q psy3048 260 SLAKKFADLVEKDDRFELVC-PPSMGLVCFRLKGD---N-DLTNQLYERLMSHKQIYIIK-ASFQGRPFLRFVVTSPETN 333 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~---~-~~~~~l~~~L~~~g~~~~~~-~~~~~~~~lRi~~~~~~~~ 333 (367)
+.++++.+.|++++|+.+.. |.....+.++++.. + ....+++.+|.++..+.+.| ..+...+++|+++.. +
T Consensus 331 ~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~---~ 407 (430)
T PLN00145 331 ETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI---D 407 (430)
T ss_pred HHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---C
Confidence 88999999999988887653 44555556655421 1 12446776666543344444 344446799998752 6
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q psy3048 334 QCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~~~ 353 (367)
.++++..++.|++++++..+
T Consensus 408 ~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 408 PPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88899999999998877654
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.71 E-value=2.2e-15 Score=145.26 Aligned_cols=258 Identities=12% Similarity=0.055 Sum_probs=164.2
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
+|++++..|.+...++...|++++.++ .+|++++++.+++... ....+|++.+..+++|.+.|+++|.++|++
T Consensus 119 ~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~ 191 (385)
T TIGR01825 119 IVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAER 191 (385)
T ss_pred EEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHH
Confidence 666788899999888888888887664 4689999998876431 113577778888999999999999999999
Q ss_pred cCcEEEEecccccccccCh-hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 112 YNIWLHVDAAYAGSALLLP-EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 112 ~gi~l~vD~a~~~~~~~~~-~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
||+++++|++|+.+.+... .......++ ...|++..+.+|+++.+ | |+++. +++..+.......+|....
T Consensus 192 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~~~~-~~~~~~~~~~~~~~~~~~~----- 263 (385)
T TIGR01825 192 YGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV-G-GYAAG-HKELIEYLKNRARPFLFST----- 263 (385)
T ss_pred hCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC-C-CEEec-CHHHHHHHHHhCccccccC-----
Confidence 9999999999976544210 000000111 24588899999999653 3 55544 3333322111111111000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
........++.++++.+.. ..+..++..++.+++.+.|
T Consensus 264 ----------------------------------------~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 264 ----------------------------------------AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGL 301 (385)
T ss_pred ----------------------------------------CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 0000112333444443322 1245566778889999999
Q ss_pred cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 270 EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 270 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
+++ |+++.. +..+.+.+.+.. .....++++.|.++|+. +.+..+ .+..++|+++ +.+++++|+++++++|+
T Consensus 302 ~~~-g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~L~~~gi~-v~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~ 376 (385)
T TIGR01825 302 GKL-GYDTGG-SETPITPVVIGD-EKAAQEFSRRLFDEGIF-AQSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYE 376 (385)
T ss_pred HHc-CCCCCC-CCCCEEEEEECC-HHHHHHHHHHHHHCCcE-EcccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHH
Confidence 886 777654 334455555432 22356788999888753 432211 2346899965 56789999999999999
Q ss_pred HHHHHh
Q psy3048 346 HQSSEM 351 (367)
Q Consensus 346 ~~~~~~ 351 (367)
++++++
T Consensus 377 ~~~~~~ 382 (385)
T TIGR01825 377 KVGKEL 382 (385)
T ss_pred HHHHHh
Confidence 988754
No 117
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2e-15 Score=146.63 Aligned_cols=264 Identities=16% Similarity=0.033 Sum_probs=171.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++.+.++......++..|++++.++.++ ++.+|+++|++++.+.+ .+|+++.|+||||.+-+ +++
T Consensus 130 gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~v~s~e~l~~ 203 (410)
T PRK06290 130 GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKA------KLLYLNYPNNPTGAVATKEFYEE 203 (410)
T ss_pred CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccc------eEEEEECCCCCCCcCCCHHHHHH
Confidence 34566677888888888889999999999964 47789999998886544 48888899999999966 688
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhh-hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|.++|++||+++++|++|+...+....... .+.+....+++..+..|.++ .+..+|+++.. ++.+....... .+..
T Consensus 204 l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~~l~~~l~~~~-~~~~ 281 (410)
T PRK06290 204 VVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-ELIVKAFATVK-DNND 281 (410)
T ss_pred HHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-HHHHHHHHHHH-hccc
Confidence 888899999999999999865432111000 01111223688888999995 34567887763 33232111000 0000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. ........+..+++. .+.+++..++..+..
T Consensus 282 ~~----------------------------------------------~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~ 313 (410)
T PRK06290 282 SG----------------------------------------------QFIAIQKAGIYALDH--PEITEKIREKYSRRL 313 (410)
T ss_pred cC----------------------------------------------CcHHHHHHHHHHhhC--cHHHHHHHHHHHHHH
Confidence 00 000011111222221 233566667778888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeE-EEEEcCCc------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLV-CFRLKGDN------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v-~f~~~~~~------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
+++.+.|++. |+.+.. |+.+.. ++++++.. ....++.+.|.++|.+.+.+.... .+++||+++.+--+++
T Consensus 314 ~~l~~~L~~~-g~~~~~-p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~ 390 (410)
T PRK06290 314 DKLVKILNEV-GFKAEM-PGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEE 390 (410)
T ss_pred HHHHHHHHhC-CCeecC-CCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEccccccc
Confidence 8999999887 777654 333443 34655311 235689999999886655443222 2589999987777899
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy3048 336 DVAFAWNEISHQSSEMN 352 (367)
Q Consensus 336 did~li~~l~~~~~~~~ 352 (367)
+.++++++|++.+.++.
T Consensus 391 ~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 391 EEDRILEEIKRRLSDVE 407 (410)
T ss_pred chhHHHHHHHHHHhhcc
Confidence 99999999999987764
No 118
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=1.3e-15 Score=146.17 Aligned_cols=247 Identities=15% Similarity=0.165 Sum_probs=162.3
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+..... ...|+++++++. .|++++++++++++ .+|.+++++|++|.+.|+++|.+
T Consensus 94 ~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~~i~~~t------klV~lesP~NPtG~v~dl~~I~~ 162 (388)
T PRK08861 94 LIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-----SDAAALDAALAKKP------KLILLETPSNPLVRVVDIAELCQ 162 (388)
T ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCcCC------eEEEEECCCCCCCcccCHHHHHH
Confidence 4556667777654432 234677777753 48999999987765 48889999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|+++|+++++|++|+.+.+..+ .. . .+|+++.++|||+++|.+ .|++..++++..++... ...++
T Consensus 163 la~~~gi~vIvDea~~~~~~~~p-l~-----~-GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~-~~~~~---- 230 (388)
T PRK08861 163 KAKAVGALVAVDNTFLTPVLQKP-LE-----L-GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW-WGNCI---- 230 (388)
T ss_pred HHHHcCCEEEEECCccccccCCC-cc-----c-CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH-HHhcc----
Confidence 99999999999999986644321 11 1 369999999999999876 45555554433222100 00000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+.....+..|. ...|.+-+.-+++++.+.+..+
T Consensus 231 ---------------------------------------------G~~~~p~~a~l--~~rgl~Tl~lR~~~~~~~a~~~ 263 (388)
T PRK08861 231 ---------------------------------------------GATGTPFDSYM--TLRGIRTLGARMRVHEESAQQI 263 (388)
T ss_pred ---------------------------------------------CCCCChHHHHH--HHhcCCCHHHHHHHHHHHHHHH
Confidence 00012234443 3346677888999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--~~ 317 (367)
.+.|+++|.+. |..| | ..++++|.+.+..+...++.+.|.--. .....|. .+
T Consensus 264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h 343 (388)
T PRK08861 264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVESLICHPASMTH 343 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCcceeeCCCcccc
Confidence 99999999875 4444 1 236889998642333445666543211 0111110 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
. ..+.+|+|+. -||++.+++.|++.++.+.+
T Consensus 344 ~~~~~~~~~~~gi~~~liRlsvG-----lE~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 344 RAMGEEALAEAGVSQQLLRLSVG-----LEDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred cccCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHHHHHHHh
Confidence 1 1458999874 36788889999888876643
No 119
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=1e-15 Score=148.87 Aligned_cols=275 Identities=15% Similarity=0.183 Sum_probs=167.1
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+....+ ...|+++++++++ |+++|+++++++++ +|++.+++|++|.+.|+++|++
T Consensus 105 ~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~ 173 (433)
T PRK08134 105 HIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-----DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAA 173 (433)
T ss_pred EEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHH
Confidence 5777788888765554 3379999999874 89999999988774 7888899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchhh-hh--hc-cCCccccc
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANHL-TN--TF-FTDRVYLK 182 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~~-~~--~~-~~~~~yl~ 182 (367)
+||++|++++||++|+.+.+..+ .. . .+|++++|+|||++++.. .|.+++...... .. .+ ...++...
T Consensus 174 la~~~gi~livD~t~a~~~~~~p-l~---~---GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~ 246 (433)
T PRK08134 174 IAHEAGVPLLVDSTFTTPYLLRP-FE---H---GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAG 246 (433)
T ss_pred HHHHcCCEEEEECCCcccccCCc-hh---c---CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCccc
Confidence 99999999999999987665332 11 1 459999999999986632 566655322110 00 00 00011100
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... .....+... .++.. .+ .......+.....+..| +...+.+.+..++++..+++
T Consensus 247 ~~g~---~~~~~~~~~-----------~~~~~-~~------~~~~~~~G~~ls~~~A~--l~~~gL~tl~~R~~~~~~nA 303 (433)
T PRK08134 247 FHGM---VFAEESTVA-----------AFLLR-AR------REGLRDFGACLSPMNAW--QLLQGIETLPLRMERHVANT 303 (433)
T ss_pred cccc---chhhccchh-----------HHHHH-HH------HHHHHhcCCCCCHHHHH--HHhcCCCcHHHHHHHHHHHH
Confidence 0000 000000000 00000 00 00000011112223333 34456777899999999999
Q ss_pred HHHHHHhcCCCCeE-EeCC-----C------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe
Q psy3048 263 KKFADLVEKDDRFE-LVCP-----P------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA 315 (367)
Q Consensus 263 ~~l~~~L~~~~g~~-~~~~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~ 315 (367)
..+.+.|+++|++. +..| | ..++++|.+.+......++.+.|.--. .+.+.|.
T Consensus 304 ~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~ 383 (433)
T PRK08134 304 RKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPA 383 (433)
T ss_pred HHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCC
Confidence 99999999999875 3332 1 246889998653333456666654211 0111111
Q ss_pred -----EE-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 316 -----SF-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 316 -----~~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.. . ..+.+|+|+. -||.+.+++.|++.++.+.
T Consensus 384 ~~~h~~~~~~~~~~~Gi~~~liRlsvG-----lE~~~dli~dl~~Al~~~~ 429 (433)
T PRK08134 384 STTHFRMDAAALAAAGIGEGTIRLSIG-----LEDADDLIDDLKRALKAAE 429 (433)
T ss_pred ccCcccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhhh
Confidence 00 1 1458999874 3678889999998887644
No 120
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.71 E-value=3e-15 Score=142.96 Aligned_cols=246 Identities=12% Similarity=0.078 Sum_probs=158.5
Q ss_pred cCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHHHHh
Q psy3048 36 SDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGPICQ 110 (367)
Q Consensus 36 s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~l~~ 110 (367)
....+..+...++..|++++.++.++ ++.+| +++++.+.+.+ .+|++++++|+||.+-+ +++|+++|+
T Consensus 100 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~------k~v~l~~p~NPTG~~~~~~~~~~i~~~a~ 172 (356)
T PRK08056 100 VTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDL------DCLFLCTPNNPTGLLPERQLLQAIAERCK 172 (356)
T ss_pred eCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCC------CEEEEeCCcCCCCCCCCHHHHHHHHHHHH
Confidence 34566677778888999999999863 35555 45555554433 47778999999999977 888999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
++|+++++|++|..+..........+... ...+++.+.+|+++ ....+|+++..++..+...... . .
T Consensus 173 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~----~---~---- 240 (356)
T PRK08056 173 SLNIALILDEAFIDFIPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ----Q---M---- 240 (356)
T ss_pred hcCCEEEEecchhccCCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh----C---C----
Confidence 99999999999865433221111112222 23678899999999 5578899877544333221100 0 0
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHH
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~~l~~~ 268 (367)
.+ . ...+...++...+ +.+...+..++..+..+++.+.
T Consensus 241 ----~~-------------------------------~------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~ 279 (356)
T PRK08056 241 ----PW-------------------------------S------INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQA 279 (356)
T ss_pred ----CC-------------------------------c------hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0012222222222 2333555566778888999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECC--eeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQG--RPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
|++++++.+. ++..+.+.++++. + ..++.+.|.++|+....+..+.+ .+++||++. +.++.++++++|++
T Consensus 280 L~~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~ 351 (356)
T PRK08056 280 LCALPLLTVW-PGRANYLFLRCER-P--DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRN 351 (356)
T ss_pred HhcCCCcEEc-CCCCcEEEEEcCC-C--hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHH
Confidence 9888888765 4555666666643 2 45788888888854333332322 469999764 57899999999988
Q ss_pred HHH
Q psy3048 347 QSS 349 (367)
Q Consensus 347 ~~~ 349 (367)
+.+
T Consensus 352 ~~~ 354 (356)
T PRK08056 352 VLT 354 (356)
T ss_pred HHc
Confidence 743
No 121
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.71 E-value=9.3e-16 Score=147.76 Aligned_cols=244 Identities=15% Similarity=0.161 Sum_probs=158.9
Q ss_pred EEEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|........ ..|+++..++. .|++++++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 102 ~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~l~~~i~~~t------klV~lesp~NptG~v~dl~~I~~ 170 (386)
T PRK06767 102 HIICSNGLYGCTYGFLEVLEEKFMITHSFCDM-----ETEADIENKIRPNT------KLIFVETPINPTMKLIDLKQVIR 170 (386)
T ss_pred EEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHHHHHhhCcCc------eEEEEeCCCCCCceecCHHHHHH
Confidence 45666777766554433 24666665544 38899999987655 48889999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|+++++|++|+.+....+ . .. .+|+++.+.+|++.++.+ .|+++.++ +.+.+........++.
T Consensus 171 la~~~g~~vivD~a~a~~~~~~p-l---~~---g~Div~~S~sK~l~g~g~~~gG~v~~~~-~~i~~~~~~~~~~~g~-- 240 (386)
T PRK06767 171 VAKRNGLLVIVDNTFCSPYLQRP-L---EL---GCDAVVHSATKYIGGHGDVVAGVTICKT-RALAEKIRPMRKDIGG-- 240 (386)
T ss_pred HHHHcCCEEEEECCCcccccCCc-h---hc---CCcEEEecCcceecCCCCceeEEEEeCh-HHHHHHHHHHHHHhCC--
Confidence 99999999999999975443221 1 11 359999999999987654 46666543 3332211000000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
....+..|+.++ +.+-+..++++..++++++
T Consensus 241 -----------------------------------------------~~~~~~a~l~~~--~L~tl~~r~~~~~~~a~~l 271 (386)
T PRK06767 241 -----------------------------------------------IMAPFDAWLLLR--GLKTLAVRMDRHCDNAEKI 271 (386)
T ss_pred -----------------------------------------------CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHH
Confidence 011123333333 3345567788899999999
Q ss_pred HHHhcCCCCeEEeC-CC----------CceeEEEEEcCCchHHHHHHHHHhccCcE---------EEEEe--E---E---
Q psy3048 266 ADLVEKDDRFELVC-PP----------SMGLVCFRLKGDNDLTNQLYERLMSHKQI---------YIIKA--S---F--- 317 (367)
Q Consensus 266 ~~~L~~~~g~~~~~-~~----------~~~~v~f~~~~~~~~~~~l~~~L~~~g~~---------~~~~~--~---~--- 317 (367)
.+.|+++|+++.+. |. ..++++|.+.+......++.++|...+.. ...|. . .
T Consensus 272 a~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 351 (386)
T PRK06767 272 VSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAE 351 (386)
T ss_pred HHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHH
Confidence 99999999988543 31 34789999875334456788887644311 01110 0 0
Q ss_pred ----C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 318 ----Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 318 ----~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
. ..+.+|+|+. -||.+.+++.|++.++.
T Consensus 352 ~~~~~gi~~~l~R~svG-----lE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 352 LRQEMGIYDNLIRLSVG-----LESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 0 2468999774 36899999999888763
No 122
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.9e-15 Score=144.58 Aligned_cols=244 Identities=15% Similarity=0.159 Sum_probs=164.4
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.++...+ ...|+++++++.. |++++++++++++ .+|.+.+++|++|.+.||++|++
T Consensus 103 ~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~-----d~~~l~~~l~~~T------rlV~~EtpsNp~~~v~DI~~Ia~ 171 (395)
T PRK08114 103 HVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL-----IGADIAKLIQPNT------KVVFLESPGSITMEVHDVPAIVA 171 (395)
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCCc------eEEEEECCCCCCCEeecHHHHHH
Confidence 4667778887877665 3469999998753 7899999998776 48999999999999999999999
Q ss_pred HHhhcC--cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC--cceeEEEecchhhhhhccCCcccccc
Q psy3048 108 ICQEYN--IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH--DCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 108 l~~~~g--i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+||++| ++++||++++.+.+ .+..+ .| +|+++.++|||++++. ++|+++. +++..+.... ..+
T Consensus 172 ia~~~g~g~~lvVDnT~a~p~~-~~pl~---~G---aDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~l~~--~~~--- 238 (395)
T PRK08114 172 AVRSVNPDAVIMIDNTWAAGVL-FKALD---FG---IDISIQAGTKYLVGHSDAMIGTAVA-NARCWEQLRE--NSY--- 238 (395)
T ss_pred HHHHhCCCCEEEEECCCccccc-cCHHH---cC---CcEEEEcCcccccCCCcceeEEEEc-CHHHHHHHHH--HHH---
Confidence 999984 99999999988655 33332 24 5999999999999995 5665543 3332221100 000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
..|....+...|.. ..|.+-+.-+++++.+.+.
T Consensus 239 ---------------------------------------------~~G~~~~p~~a~l~--~rgl~TL~lR~~~~~~na~ 271 (395)
T PRK08114 239 ---------------------------------------------LMGQMVDADTAYMT--SRGLRTLGVRLRQHEESSL 271 (395)
T ss_pred ---------------------------------------------hccCCCCHHHHHHH--HcCCCcHHHHHHHHHHHHH
Confidence 00111223444533 3466777888999999999
Q ss_pred HHHHHhcCCCCeE-EeCCC----------------CceeEEEEEcCC--chHHHHHHHHHhc--cC-------cEEE--E
Q psy3048 264 KFADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGD--NDLTNQLYERLMS--HK-------QIYI--I 313 (367)
Q Consensus 264 ~l~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~--~~~~~~l~~~L~~--~g-------~~~~--~ 313 (367)
.+.+.|+++|.++ +..|. ..++++|.+++. .+...++++.|.- .+ .... .
T Consensus 272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~ 351 (395)
T PRK08114 272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILANQ 351 (395)
T ss_pred HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceeccCC
Confidence 9999999999875 55441 246899998642 2233455555432 11 0111 0
Q ss_pred EeE--E--------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 314 KAS--F--------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 314 ~~~--~--------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.. . ...+.+|+|+. -||++.+++.|++.++.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~liRlSvG-----lEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 352 PEEIAAIRPAGEVDFTGTLIRLHIG-----LEDVDDLIADLAAGFARI 394 (395)
T ss_pred chhhhccCChhHhcCCCCeEEEEec-----cCCHHHHHHHHHHHHHhh
Confidence 100 0 11268999774 368999999999887653
No 123
>PLN02271 serine hydroxymethyltransferase
Probab=99.71 E-value=1.5e-15 Score=147.92 Aligned_cols=260 Identities=14% Similarity=0.093 Sum_probs=160.5
Q ss_pred HhCCcceEEEe--cC-CCCCcCHHHHHHHH-HHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccc
Q psy3048 48 IIGDVPVRQLR--SD-DNGVLRGDALLTAV-KEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 48 ~~~g~~v~~v~--~~-~~~~~d~~~L~~~l-~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
...|..+..++ ++ +++.+|.++|++.. ..+ |.+|++.+..++ ...|+++|.++|+++|+++++|+||.
T Consensus 265 s~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~r------PKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~ 336 (586)
T PLN02271 265 SGASIFFESLPYKVNPQTGYIDYDKLEEKALDFR------PKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHI 336 (586)
T ss_pred ccccceEEEEEcccccccCccCHHHHHHHhhhcC------CeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccc
Confidence 44566555555 54 57999999999854 333 567777655444 66799999999999999999999999
Q ss_pred cccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcc
Q psy3048 124 GSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGK 203 (367)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 203 (367)
.|.+..+.+.. .+..||++++++||||.+|.| |+++++++.. ... .+........ ...+.+..-+..
T Consensus 337 aGLIa~g~~~s---P~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~--~g~~gs~s~~-----~~~~d~~~kI~~ 403 (586)
T PLN02271 337 SGLVAAKECVN---PFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK--QGMLLSHGDD-----NSHYDFEEKINF 403 (586)
T ss_pred ccccccCcCCC---CCcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc--cCCccccccc-----cccHHHHHHhhc
Confidence 99887654432 244689999999999999999 8878764311 000 0000000000 000000000000
Q ss_pred cCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-C
Q psy3048 204 ALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-P 281 (367)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~ 281 (367)
.+ +| .++++... ...++..+++......+.++.++..++++.|.+.|.+. |++++.. .
T Consensus 404 aV-fP------------------glqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT 463 (586)
T PLN02271 404 AV-FP------------------SLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT 463 (586)
T ss_pred cc-CC------------------ccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC
Confidence 00 00 11222211 23455566776656667888899999999999999886 9998763 3
Q ss_pred CceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeE--ECCeeEEEEEe---cCCCCCHHHHHHHHHHHHHHHH
Q psy3048 282 SMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KAS--FQGRPFLRFVV---TSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 282 ~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~--~~~~~~lRi~~---~~~~~~~edid~li~~l~~~~~ 349 (367)
+.+.+.+.+...........+.|...|+ .+- |.. ...+..+|+.. +.....++|++.+.+.|.++++
T Consensus 464 dnHlvLvDl~~~g~~G~~ae~~Le~~~I-~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 464 DNHLLLWDLTTLGLTGKNYEKVCEMCHI-TLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcceeeecCcccCCCHHHHHHHHHHcCe-EeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 5677777765432223455555665563 332 111 11245799843 3344567999998888888776
No 124
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=2.4e-15 Score=145.45 Aligned_cols=246 Identities=14% Similarity=0.137 Sum_probs=159.5
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|... ...+...|.+++.++. .|+++|++++++.+ .+|++++++|++|.+.|+++|++
T Consensus 101 ~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-----~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~ 169 (405)
T PRK08776 101 TLVVPHDAYGGSWRLFNALAKKGHFALITADL-----TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIE 169 (405)
T ss_pred EEEEccCCchHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHH
Confidence 344556666653 3334446777777764 38899999987655 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|+++|+++++|++|+.+.... ... . .+|+++.|+||++++|.+ .|+++.++++..++... +....
T Consensus 170 la~~~gi~vIvD~a~a~~~~~~-pl~---~---gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~----~~~~~- 237 (405)
T PRK08776 170 AAHKVGALTVVDNTFLSPALQK-PLE---F---GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW----WANAL- 237 (405)
T ss_pred HHHHcCCEEEEECCCcccccCC-ccc---c---cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH----HHHhc-
Confidence 9999999999999997643321 111 1 359999999999998865 46666655543332110 00000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+.....+..|..+ .+.+.++.++++..+++..+
T Consensus 238 ---------------------------------------------g~~~s~~~a~l~~--~gl~tl~~r~~~~~~na~~l 270 (405)
T PRK08776 238 ---------------------------------------------GLTGSPFDAFLTL--RGLRTLDARLRVHQENADAI 270 (405)
T ss_pred ---------------------------------------------CCCCCHHHHHHHH--hhhCcHHHHHHHHHHHHHHH
Confidence 0001123444333 45667888999999999999
Q ss_pred HHHhcCCCCeE-EeCCC----------------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~ 317 (367)
.+.|+++|.+. +..|. ..++++|.+.+..+...++.+.|.-- + .....|. .+
T Consensus 271 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h 350 (405)
T PRK08776 271 AALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTH 350 (405)
T ss_pred HHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCceEEECCccccc
Confidence 99999999875 44331 23689999975333335666665421 1 1111111 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. ..+.+|+|+. -||++.+++.|++.++++.
T Consensus 351 ~~~~~~~~~~~gi~~~liR~svG-----lE~~~dli~dl~~al~~~~ 392 (405)
T PRK08776 351 AAMTAEARAAAGISDGLLRLSVG-----IESAEDLLIDLRAGLARAE 392 (405)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHHHHHhH
Confidence 0 1458999874 3678888888888777653
No 125
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.70 E-value=6.5e-15 Score=142.95 Aligned_cols=267 Identities=10% Similarity=0.031 Sum_probs=168.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.++..+...+...|++++.++.+ +++.+|++++++++.+.+ .++++++++|++|.+- ++++
T Consensus 120 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~~~~ 193 (403)
T TIGR01265 120 GANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGSVFSRDHLQK 193 (403)
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCCCCCHHHHHH
Confidence 3456777888888888888899999998874 357899999999886654 4788899999999995 4899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCC-Cc-ceeeeccccccccC-CcceeEEEecch-hhhh-hccCCcc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-YV-DSFAFNAHKWLLTN-HDCSAMWVKNAN-HLTN-TFFTDRV 179 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~-~~-D~~~~~~hK~l~~p-~g~g~l~~~~~~-~~~~-~~~~~~~ 179 (367)
|.++|+++|+++++|++|+...+....... +..+. .. -+++.+..|.+..| ..+|+++..++. .+.. .......
T Consensus 194 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~ 272 (403)
T TIGR01265 194 IAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN 272 (403)
T ss_pred HHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH
Confidence 999999999999999999865442211111 11111 11 25666789986555 678888875431 1111 0000000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+.... +. ...+....+..+++.....-+++..++..
T Consensus 273 ~~~~~-----------------------------------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 308 (403)
T TIGR01265 273 LLQRI-----------------------------------------LG---PATIVQGALPDILENTPQEFFDGKISVLK 308 (403)
T ss_pred Hhhhh-----------------------------------------cC---CChHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 00000 00 00011122222333222344666677778
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc----hHHHHHHHHHh-ccCcEEEEEeEECCeeEEEEEecCCCCCH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN----DLTNQLYERLM-SHKQIYIIKASFQGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~----~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ 334 (367)
+..+++.+.|+.++|+.+..|+....+.++++... ....++.+.|. +.|+....+..+....++|+++.. .+
T Consensus 309 ~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~---~~ 385 (403)
T TIGR01265 309 SNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV---PE 385 (403)
T ss_pred HHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC---CH
Confidence 88888999999887887555556666677765310 12567877764 556443333333346799998753 47
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQSSE 350 (367)
Q Consensus 335 edid~li~~l~~~~~~ 350 (367)
++++..++.|.+++++
T Consensus 386 ~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 386 SMLEEACSRIKEFCER 401 (403)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8899998888888765
No 126
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=1.8e-15 Score=145.82 Aligned_cols=202 Identities=14% Similarity=0.188 Sum_probs=135.6
Q ss_pred EEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+.. ..++..|++++.++.+ |++++++++++.+ .+|++++++|++|.+.|+++|.+
T Consensus 94 ~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~t------klV~l~~p~NptG~~~dl~~I~~ 162 (390)
T PRK08064 94 HVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-----NLEEVAQNIKPNT------KLFYVETPSNPLLKVTDIRGVVK 162 (390)
T ss_pred EEEEccCccchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCc------eEEEEECCCCCCcEeccHHHHHH
Confidence 4566777776433 4455689999999864 7899999987765 48889999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|+++++|++|+.+....+ .. . .+|+++.++|||+.++.| .|++++++++..++... +...
T Consensus 163 la~~~g~~vvvD~a~~~~~~~~~-~~---~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~----~~~~-- 229 (390)
T PRK08064 163 LAKAIGCLTFVDNTFLTPLLQKP-LD---L---GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF----LQNS-- 229 (390)
T ss_pred HHHHcCCEEEEECCCCcccccCc-hh---h---CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH----HHHh--
Confidence 99999999999999876543221 11 1 359999999999998887 47777765543332210 0000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
|... ..+...|..+ .+.+-+..++++..+.+..+
T Consensus 230 ----------------------------------------~g~~----~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~l 263 (390)
T PRK08064 230 ----------------------------------------FGAV----LGVQDCWLVL--RGLKTLHVRLEHSSETANKI 263 (390)
T ss_pred ----------------------------------------cCCC----CCHHHHHHHH--cccCcHHHHHHHHHHHHHHH
Confidence 0000 0112223222 34445677888888999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHH
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERL 304 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L 304 (367)
.+.|+++|.+. +..| | ..++++|.+.+ ......+.+.|
T Consensus 264 a~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~f~~~l 318 (390)
T PRK08064 264 ALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQFVSHV 318 (390)
T ss_pred HHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHHHHHhC
Confidence 99999887653 3333 1 34689999864 23333455443
No 127
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.70 E-value=1.4e-15 Score=146.95 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=161.4
Q ss_pred EEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+.... +...|++++.++. +|++++++++++.+ .+|++++++|++|.+.|+++|.+
T Consensus 106 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~t------klV~lesp~NptG~v~dl~~I~~ 174 (398)
T PRK07504 106 HVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNT------KVFFLESPTNPTLEVIDIAAVAK 174 (398)
T ss_pred EEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCc------eEEEEECCCCCCcEecCHHHHHH
Confidence 456666677664333 3456888888852 68999999997766 48999999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+|+++|+++++|++|+.+....+ .. . .+|+++.|+|||++++. ..|++++.+++.+.+.+. .+...
T Consensus 175 la~~~gi~lvvD~a~a~~~~~~~-~~---~---gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~--- 241 (398)
T PRK07504 175 IANQAGAKLVVDNVFATPLFQKP-LE---L---GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH--- 241 (398)
T ss_pred HHHHcCCEEEEECCccccccCCc-hh---h---CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH---
Confidence 99999999999999976544221 11 1 35999999999998753 355445544443322110 00000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.+.....+..+..+ .+.+-+..++++..++++++.
T Consensus 242 -------------------------------------------~g~~~s~~~A~~~l--~~L~tl~~R~~~~~~na~~la 276 (398)
T PRK07504 242 -------------------------------------------TGPSLSPFNAWTLL--KGLETLPVRVRQQTESAAAIA 276 (398)
T ss_pred -------------------------------------------hCCCCCHHHHHHHH--hccchHHHHHHHHHHHHHHHH
Confidence 00111223334333 356667888899999999999
Q ss_pred HHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEe--EE-
Q psy3048 267 DLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKA--SF- 317 (367)
Q Consensus 267 ~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~--~~- 317 (367)
+.|+++|++. +..| | ..++++|.+.+..+...++.+.|.--.. ....|. .+
T Consensus 277 ~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~ 356 (398)
T PRK07504 277 DFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHK 356 (398)
T ss_pred HHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcc
Confidence 9999999875 4443 1 1568999996533334466666532110 011110 00
Q ss_pred ---------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 318 ---------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 318 ---------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. ..+.+|+|+. -||.+.+++.|++.+++++
T Consensus 357 ~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 357 NLSPEARAELGISEGFLRLSAG-----LEDTDDLIEDLAAALKKVR 397 (398)
T ss_pred cCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhhh
Confidence 0 2468999774 3678889999998887653
No 128
>PLN00175 aminotransferase family protein; Provisional
Probab=99.70 E-value=2e-15 Score=146.91 Aligned_cols=261 Identities=11% Similarity=0.054 Sum_probs=168.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
.-.|++.+..|..+...++..|++++.|+.+ +++.+|+++|++++.+.+ .+|++++++|+||.+- ++++|
T Consensus 139 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~------k~i~i~~p~NPtG~~~s~~~l~~l 212 (413)
T PLN00175 139 GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKT------RAILINTPHNPTGKMFTREELELI 212 (413)
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCc------eEEEecCCCCCCCcCCCHHHHHHH
Confidence 3456667788988988999999999999986 458999999999987654 4778899999999984 67889
Q ss_pred HHHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+++|++||+++++|++|....+..+... ..+.+...-.+++.+..|.++ ....+|+++... ..+..... ...+.
T Consensus 213 ~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~-~l~~~l~~-~~~~~-- 288 (413)
T PLN00175 213 ASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQ-AHSFL-- 288 (413)
T ss_pred HHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH-HHHHHHHH-HHhhc--
Confidence 9999999999999999977654221110 011111112466678899997 446788888743 22221100 00000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
.+ + ...+....+..+|.. +...+++..++..+.++
T Consensus 289 ----------~~-------------------------------~---~s~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~~~ 323 (413)
T PLN00175 289 ----------TF-------------------------------A---TATPMQWAAVAALRA-PESYYEELKRDYSAKKD 323 (413)
T ss_pred ----------cC-------------------------------C---CCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 00 0 000111222223322 23456777778888899
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-hHHHHHHHHHhc-cCcEEEEEeEE-----CCeeEEEEEecCCCCCHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDN-DLTNQLYERLMS-HKQIYIIKASF-----QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~-~g~~~~~~~~~-----~~~~~lRi~~~~~~~~~ed 336 (367)
++.+.|++. |+.+..|.....+++++.+.+ ....++.+.|.+ .|+....++.+ .+..++|++++. ++++
T Consensus 324 ~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~---~~e~ 399 (413)
T PLN00175 324 ILVEGLKEV-GFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK---DEET 399 (413)
T ss_pred HHHHHHHHC-CCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC---CHHH
Confidence 999999887 777665444344555553211 124678888865 47544433322 134699998753 6899
Q ss_pred HHHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQSS 349 (367)
Q Consensus 337 id~li~~l~~~~~ 349 (367)
++..++.|++.++
T Consensus 400 l~~~~~rL~~~~~ 412 (413)
T PLN00175 400 LRAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 129
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.70 E-value=2.3e-15 Score=144.37 Aligned_cols=272 Identities=11% Similarity=0.137 Sum_probs=168.7
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+.-.|++++.+|.+...++...|++++.++.+++ +.+|++++++++++.++ +|+.+ +++|...|+++|.+
T Consensus 70 pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk------~Iip~---~~~G~~~d~~~I~~ 140 (376)
T TIGR02379 70 PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTK------AIVPV---HYAGVACDMDTIMA 140 (376)
T ss_pred CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCce------EEEEe---CCCCCccCHHHHHH
Confidence 3446777889999999999999999999999754 78999999999876553 55544 56899999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC-
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA- 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~- 186 (367)
+|++||+++++|+||+.+....... ...+..+.++++...|.+......|++++.+++..++.. .+...+..
T Consensus 141 la~~~~i~vIeDaa~~~g~~~~~~~---~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~----~~~~~g~~~ 213 (376)
T TIGR02379 141 LANKHQLFVIEDAAQGVMSTYKGRA---LGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAE----IIREKGTNR 213 (376)
T ss_pred HHHHCCCEEEEECccccCCccCCcc---cCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHH----HHHHhCCCC
Confidence 9999999999999998765321110 111223345555555666654356778887665544331 11111100
Q ss_pred -CCC-CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 187 -PMN-TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 187 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
... .....| .+ ...+.++.+-.+.+++.....+.++++.++.++++++
T Consensus 214 ~~~~~~~~~~~-----------------------------~~-~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~ 263 (376)
T TIGR02379 214 SQFFRGEVDKY-----------------------------TW-RDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQL 263 (376)
T ss_pred ccccccCCCcc-----------------------------ee-eeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 000 000000 00 0112223333444555444566788899999999999
Q ss_pred HHHHhcCCC--C-eEEeC-CCC----ceeEEEEEcCCchHHHHHHHHHhccCcEEEE---EeE-------EC---C----
Q psy3048 265 FADLVEKDD--R-FELVC-PPS----MGLVCFRLKGDNDLTNQLYERLMSHKQIYII---KAS-------FQ---G---- 319 (367)
Q Consensus 265 l~~~L~~~~--g-~~~~~-~~~----~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~-------~~---~---- 319 (367)
+.+.|+.++ + +.+.. ++. .....++++. ....+++.+.|.++|+..-. +.. +. +
T Consensus 264 y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~ 342 (376)
T TIGR02379 264 YQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIY 342 (376)
T ss_pred HHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChH
Confidence 999998764 2 23221 211 1233444432 12356889999988843110 100 00 0
Q ss_pred -----eeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 320 -----RPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 320 -----~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
...+.+ ++++..+++|+++++++|+++.
T Consensus 343 ~~~~~~~~l~L-P~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 343 TTKESERLVRL-PLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHHHHhceEEc-cCCCCCCHHHHHHHHHHHHHHh
Confidence 224666 6788899999999999998863
No 130
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.70 E-value=4.5e-15 Score=145.53 Aligned_cols=270 Identities=16% Similarity=0.121 Sum_probs=163.4
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--------C--CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc-
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--------N--GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC- 97 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--------~--~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G- 97 (367)
++ |++++..+.+....+...|++++.+++++ + |.+|+++|++++.+... ..+.+|++++++|++|
T Consensus 117 GD--Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG 192 (460)
T PRK13238 117 GD--VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGG 192 (460)
T ss_pred CC--EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCC
Confidence 46 55565533344455778999999998852 2 45999999999975321 1135889999999998
Q ss_pred cc---CChhhHHHHHhhcCcEEEEecccccc-cccCh---------hhhhhh-CCCCCcceeeeccccccccCCcceeEE
Q psy3048 98 AF---DNLEELGPICQEYNIWLHVDAAYAGS-ALLLP---------EYAHLK-RGLEYVDSFAFNAHKWLLTNHDCSAMW 163 (367)
Q Consensus 98 ~i---~dl~~I~~l~~~~gi~l~vD~a~~~~-~~~~~---------~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~ 163 (367)
.+ +++++|.++|++||++++.|+||... .++.. ...... .-.+.+|+++++++|.+.+|.| |+++
T Consensus 193 ~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~ 271 (460)
T PRK13238 193 QPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLC 271 (460)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEE
Confidence 55 45789999999999999999988442 11111 000000 0014579999999999999876 7888
Q ss_pred EecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHH
Q psy3048 164 VKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMT 242 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (367)
.++.+.+.+..... ....+ +...++... .+.++..+
T Consensus 272 ~~d~~l~~~~~~~~--~~~~g-----------------------------------------~~t~~g~~~~~~~Ala~~ 308 (460)
T PRK13238 272 FRDEDLFTECRTLC--ILYEG-----------------------------------------FPTYGGLAGRDMEALAVG 308 (460)
T ss_pred cChHHHHHHhhhcc--cccCC-----------------------------------------cccccCcHHHHHHHHHhh
Confidence 77655444321100 00000 000011001 11222223
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC------ch-HHHHHHHHHhccCcEEEEE-
Q psy3048 243 LRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD------ND-LTNQLYERLMSHKQIYIIK- 314 (367)
Q Consensus 243 l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~------~~-~~~~l~~~L~~~g~~~~~~- 314 (367)
++.... +...++..+.+++|.+.|++. |+.+..|.....+...+... .. ...+++..|.++..+...+
T Consensus 309 l~e~~~---~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~ 384 (460)
T PRK13238 309 LYEGMD---EDYLAYRIGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEI 384 (460)
T ss_pred HHHhhC---hHHHHHHHHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecc
Confidence 332111 122333444578899999886 99988776655565554321 01 1356777777655444322
Q ss_pred eEE-------CC------eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 315 ASF-------QG------RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 315 ~~~-------~~------~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+.+ .+ ...+|++++-..-+.+++|.+.++|+++.++
T Consensus 385 ~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 385 GSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 211 11 4799998865445799999999999998764
No 131
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.70 E-value=2.5e-15 Score=143.96 Aligned_cols=249 Identities=9% Similarity=-0.015 Sum_probs=165.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|..+...+...|++++.++. +++.+|++++++++++.+ .+|++++++|++|.+.|.++|.++++
T Consensus 109 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~~~~------~~v~l~~p~nptG~~~~~~~l~~l~~ 181 (367)
T PRK02731 109 DEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVTPRT------RLVFIANPNNPTGTYLPAEEVERFLA 181 (367)
T ss_pred CEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhCCCC------cEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 45666777887777777889999999988 468899999999986543 47778999999999999999999998
Q ss_pred hc--CcEEEEecccccccccCh---hhhhhhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccccccC
Q psy3048 111 EY--NIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 111 ~~--gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
.+ |+++++|++|..+..... .... . +...-.+++.+..|.++. +..+|+++.++ +.++........
T Consensus 182 ~~~~~~~li~De~y~~~~~~~~~~~~~~~-~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~-~~~~~l~~~~~~----- 253 (367)
T PRK02731 182 GVPPDVLVVLDEAYAEYVRRKDYEDGLEL-V-AKFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EIIDALNRVRQP----- 253 (367)
T ss_pred hCCCCcEEEEECcHHHhccCcCcccHHHH-H-hhcCCEEEEeeehHhhcCcccceeeeeCCH-HHHHHHHHccCC-----
Confidence 74 999999999875443111 1111 1 111113555677898753 35678888743 333221110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~ 263 (367)
+ . ...+...++.+.+. .+.+++..++..++.+
T Consensus 254 ----------~-------------------------------~------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 286 (367)
T PRK02731 254 ----------F-------------------------------N------VNSLALAAAVAALDDDAFVEKSRALNAEGMA 286 (367)
T ss_pred ----------C-------------------------------C------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 0 0 00123333333333 2346777777888888
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++.+.|++. |+.+. ++..+.++++++. ...+.++.++|.++|+ .+.+.. +..++++|++++ +.+|++++++
T Consensus 287 ~l~~~L~~~-g~~~~-~~~g~~~~i~~~~-~~~~~~~~~~L~~~gI-~v~~~~~~~~~~~iRis~~----~~~e~~~l~~ 358 (367)
T PRK02731 287 WLTEFLAEL-GLEYI-PSVGNFILVDFDD-GKDAAEAYQALLKRGV-IVRPVAGYGLPNALRITIG----TEEENRRFLA 358 (367)
T ss_pred HHHHHHHHC-CCccC-CCCceEEEEECCC-CCCHHHHHHHHHHCCE-EEEeCCCCCCCCeEEEecC----CHHHHHHHHH
Confidence 999999887 77664 4566777787743 2346789999988885 444332 222468999763 5889999999
Q ss_pred HHHHHHH
Q psy3048 343 EISHQSS 349 (367)
Q Consensus 343 ~l~~~~~ 349 (367)
+|+++++
T Consensus 359 aL~~~~~ 365 (367)
T PRK02731 359 ALKEFLA 365 (367)
T ss_pred HHHHHHh
Confidence 9999864
No 132
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.70 E-value=7.6e-16 Score=147.62 Aligned_cols=243 Identities=21% Similarity=0.232 Sum_probs=159.4
Q ss_pred eEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|+++...|.+.... +...|++++.++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|+
T Consensus 80 d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~------~~v~~e~~~np~g~~~dl~~i~ 148 (369)
T cd00614 80 DHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-----DPEALEAAIKPET------KLVYVESPTNPTLKVVDIEAIA 148 (369)
T ss_pred CEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCeecCHHHHH
Confidence 3567777888876543 44578899888765 6899999987644 4788899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||+||+++++|++|+.+.+.. ... . .+|+++.+.+|+++++.. .|+++.++.+..++.... ..++..
T Consensus 149 ~la~~~g~~livD~t~~~~~~~~-~~~---~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~~~g~- 219 (369)
T cd00614 149 ELAHEHGALLVVDNTFATPYLQR-PLE---L---GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL-RLALGT- 219 (369)
T ss_pred HHHHHcCCEEEEECCCcchhcCC-hhh---h---CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH-HHhhCC-
Confidence 99999999999999998765421 111 1 359999999999987643 566666443433322100 000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.......++.++. .+.+..++++..+++++
T Consensus 220 ------------------------------------------------~~~p~~a~~~l~~--l~tl~~r~~~~~~na~~ 249 (369)
T cd00614 220 ------------------------------------------------ILSPFDAWLLLRG--LKTLPLRMERHSENALK 249 (369)
T ss_pred ------------------------------------------------CCCHHHHHHHHcC--CCCHHHHHHHHHHHHHH
Confidence 0112333443333 34566778889999999
Q ss_pred HHHHhcCCCCeE-EeCC----------------CCceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--E
Q psy3048 265 FADLVEKDDRFE-LVCP----------------PSMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--S 316 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~----------------~~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--~ 316 (367)
+.+.|+++|++. +..| ...++++|.+.+..+...++.+.|.--. ...+.+. .
T Consensus 250 la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~ 329 (369)
T cd00614 250 VAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMT 329 (369)
T ss_pred HHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccc
Confidence 999999998764 3333 1367899998643344456666554221 0011111 1
Q ss_pred E----------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 317 F----------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 317 ~----------~~--~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
+ .| ++.+|+|+.- ||++.+++.|++.+
T Consensus 330 ~~~~~~~~~~~~g~~~~liR~svGl-----E~~~dl~~dl~~al 368 (369)
T cd00614 330 HSQLPPEERAAAGITPGLVRLSVGI-----EDVEDLIADLEQAL 368 (369)
T ss_pred cccCCHHHHHhcCCCCCeEEEEeCc-----CCHHHHHHHHHHhh
Confidence 1 02 4689997742 78999999998864
No 133
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.70 E-value=1.1e-14 Score=140.46 Aligned_cols=265 Identities=12% Similarity=0.059 Sum_probs=160.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhh--------CCCccEEEEEecCCCcccccCC
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLA--------KGLIPCCLVATLGTTGTCAFDN 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~--------~~~~~~~vv~~~~~t~~G~i~d 101 (367)
.-.|++++..|.++..++...+++++.++++ |++++++.++.... ......+|++..+.+++|.+.|
T Consensus 82 GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~ 156 (392)
T PLN03227 82 GDLLVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP 156 (392)
T ss_pred CCEEEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC
Confidence 3467789999999999988888888888764 45555554432211 0122467888888899999999
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccC-hhhhhh---hCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLL-PEYAHL---KRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~-~~~~~~---~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
+++|.++|++||+++++|++|+.+.+.. ...... +.....+|+++.+.+|.++ |. .|++.. +.+.........
T Consensus 157 l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~-~~~~~~~~~~~~ 233 (392)
T PLN03227 157 LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVG-SEEVVDHQRLSG 233 (392)
T ss_pred HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEec-CHHHHHHHHHhC
Confidence 9999999999999999999997432210 000011 1112346999999999865 32 334443 333222110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
..+.+.. ... .+.+.+..+++.... ..+++.++
T Consensus 234 ~~~~~~~--------------------------------------------~~~-p~~~~aa~~al~~~~--~~~~~~~~ 266 (392)
T PLN03227 234 SGYCFSA--------------------------------------------SAP-PFLAKADATATAGEL--AGPQLLNR 266 (392)
T ss_pred cCccccC--------------------------------------------CCC-HHHHHHHHHHHHHHh--cCHHHHHH
Confidence 1111100 000 011122222232211 13456778
Q ss_pred HHHHHHHHHHHhcCCCCeE----------EeCCCCceeEEEEEcCCchH---------HHHHHHHHhccCcEEEE-Ee--
Q psy3048 258 HISLAKKFADLVEKDDRFE----------LVCPPSMGLVCFRLKGDNDL---------TNQLYERLMSHKQIYII-KA-- 315 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~----------~~~~~~~~~v~f~~~~~~~~---------~~~l~~~L~~~g~~~~~-~~-- 315 (367)
.+++.+++++.|++. ++. +...+..+++.+.+.+ +.. ..++.+.+.++|.+... +.
T Consensus 267 l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 344 (392)
T PLN03227 267 LHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSD-QEATRRTDETLILDQIAHHSLSEGVAVVSTGGHV 344 (392)
T ss_pred HHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCC-HHHhhhhhhhhHHHHHHHHHHHCCCEEEeccccc
Confidence 889999999999752 322 1222356677777743 221 24788889999964321 10
Q ss_pred ----EECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 316 ----SFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 316 ----~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
..-++..+|+++ +...|++|||++++.|+++++++.
T Consensus 345 ~~~~~~~P~~~iR~~~-~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 345 KKFLQLVPPPCLRVVA-NASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred CCcCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112356899966 567789999999999999988764
No 134
>PRK07682 hypothetical protein; Validated
Probab=99.70 E-value=1.7e-15 Score=145.84 Aligned_cols=260 Identities=11% Similarity=0.044 Sum_probs=167.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.+|..+...++..|.+++.++.+ +++.+|+++|++++.+.+ .+++++.++|+||.+- ++++
T Consensus 105 gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~~~~~~ 178 (378)
T PRK07682 105 GDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNKSELEE 178 (378)
T ss_pred CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCHHHHHH
Confidence 3456677888888888888899999999875 357899999999887644 4777889999999984 5899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|+++|++||+++++|++|+.+.+..+... ..+.+...-.++..+..|.++.| ..+|+++... +.++..... ..+..
T Consensus 179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i~~l~~~-~~~~~ 256 (378)
T PRK07682 179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-YFSEAMLKI-HQYSM 256 (378)
T ss_pred HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-HHHHHHHHH-HHhhc
Confidence 99999999999999999986554211000 01112212257777889999743 4588888743 333221110 00000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLRKHIS 260 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~~~~~ 260 (367)
+. .. .+...++...+ +...+++..++..+
T Consensus 257 -------------------------------------------~~---~~---~~~q~a~~~~l~~~~~~~~~~~~~~~~ 287 (378)
T PRK07682 257 -------------------------------------------MC---AP---TMAQFAALEALRAGNDDVIRMRDSYRK 287 (378)
T ss_pred -------------------------------------------cC---CC---HHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 00 00 11222222222 23446777777888
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-E--CCeeEEEEEecCCCCCHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-F--QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~ed 336 (367)
.++++.+.|+++ |+++..|.....++..+.+......++.+.|. ++|+ .+.++. + .+..++|+++.. ++++
T Consensus 288 ~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv-~v~pg~~f~~~~~~~iRis~~~---~~~~ 362 (378)
T PRK07682 288 RRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKV-AVVPGSVFGESGEGFIRCSYAT---SLEQ 362 (378)
T ss_pred HHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCE-EEcCchhhCcCCCCeEEEEeCC---CHHH
Confidence 899999999987 77654443322333334321223567888876 5674 444432 2 235799998753 5899
Q ss_pred HHHHHHHHHHHHHHh
Q psy3048 337 VAFAWNEISHQSSEM 351 (367)
Q Consensus 337 id~li~~l~~~~~~~ 351 (367)
++..++.|++++++.
T Consensus 363 l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 363 LQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999987653
No 135
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.70 E-value=8.8e-16 Score=146.80 Aligned_cols=258 Identities=17% Similarity=0.130 Sum_probs=172.3
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh---h
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL---E 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl---~ 103 (367)
+.-.|++.+..|..+...++..|++++.++.+ .++.+|+++|++.+++...++..+.+++++.++|+||.+-+. +
T Consensus 92 ~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~ 171 (363)
T PF00155_consen 92 PGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELR 171 (363)
T ss_dssp TTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHH
T ss_pred ccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccccccccccccc
Confidence 35568888899999999999999999999964 679999999999999865443234688899999999998555 5
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhh---hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYA---HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~---~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+|+++|++||+++++|++|+.+.+...... ..+..- .-.+++.+..|.++.| ..+|++++ ++............
T Consensus 172 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~ 249 (363)
T PF00155_consen 172 ELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDED-DNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRS 249 (363)
T ss_dssp HHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTT-STEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHH
T ss_pred chhhhhcccccceeeeeceeccccCCCccCccccccccc-ccceeeeeccccccccccccccccc-hhhhhhhhhhcccc
Confidence 555559999999999999988766532211 111111 1147888899988755 46888888 33333221100000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH--HHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL--KGLQAYLRK 257 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~~~~ 257 (367)
+. . .......+...+...+. +.+++..++
T Consensus 250 ~~----------------------------------------------~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (363)
T PF00155_consen 250 GL----------------------------------------------S---SSPMQAAAAAALSDPELVEKWLEELRER 280 (363)
T ss_dssp TT----------------------------------------------S---SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc----------------------------------------------c---cchhhHHHHHhhhcccccccccccchhh
Confidence 00 0 00111122222222221 267788888
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCCchHHHHHHHHHhcc-CcEEEEEe-EECCeeEEEEEecCCCCCH
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPSMGLVCF-RLKGDNDLTNQLYERLMSH-KQIYIIKA-SFQGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~lRi~~~~~~~~~ 334 (367)
..+..+++.+.|+++ |+.+..++ .+.+.+ .+.. ....++.+.|.++ |+ .+.++ .+..+.++|+++ ...++
T Consensus 281 l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~L~~~~gi-~v~pg~~~~~~~~iRi~~--a~~~~ 353 (363)
T PF00155_consen 281 LRENRDLLREALEEI-GITVLPPE-AGFFLWVRLDP--NDAEELAQELLEEYGI-LVRPGSYFGVPGYIRISL--ASHSE 353 (363)
T ss_dssp HHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEESH--HHHHHHHHHHHHHHTE-EEEEGGGGTSTTEEEEEG--GCSCH
T ss_pred HHHHHHHHHHHHHHh-hhheeecc-CccEEEEEccc--chHHHHHHHHHHhCCE-EEEecCCCCCCCEEEEEe--ccCCH
Confidence 999999999999888 89888665 454444 3432 2457899999988 74 44443 222366999976 34579
Q ss_pred HHHHHHHHHH
Q psy3048 335 CDVAFAWNEI 344 (367)
Q Consensus 335 edid~li~~l 344 (367)
+++++++++|
T Consensus 354 e~~~~~~~~l 363 (363)
T PF00155_consen 354 EDLEEALERL 363 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhC
Confidence 9999999876
No 136
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=9.7e-15 Score=139.15 Aligned_cols=245 Identities=11% Similarity=0.048 Sum_probs=163.2
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
.|++++.++..+...++..|++++.++.++++.+|++++++++++ .+ .+|++++++|+||.+-+.+++.++|+
T Consensus 102 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~------k~v~l~~p~NPtG~~~~~~~l~~l~~ 175 (351)
T PRK14807 102 VVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQP------KLVFLCNPNNPTGSVIEREDIIKIIE 175 (351)
T ss_pred EEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCC------CEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 455667777777778888999999999887789999999999875 33 47777899999999999999999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
+++.++++|++|+... ........... .-.++..+..|.++ ....+|+++.. ++...........
T Consensus 176 ~~~~~~ivDe~y~~~~--~~~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~~-~~~~~~~~~~~~~---------- 241 (351)
T PRK14807 176 KSRGIVVVDEAYFEFY--GNTIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVAN-ENILKYLNLVKSP---------- 241 (351)
T ss_pred hCCCEEEEeCcchhhc--ccchHHHhhhC-CCEEEEecchHhcccchhceeeeecC-HHHHHHHHHccCC----------
Confidence 9899999999996532 11111111111 11466777899996 44678887753 3333221110000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
+ . ...+...++.+.+....+++..++..+..+++.+.|
T Consensus 242 -----~-------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l 279 (351)
T PRK14807 242 -----Y-------------------------------N------INSLSQVIALKVLRTGVLKERVNYILNERERLIKEL 279 (351)
T ss_pred -----C-------------------------------C------cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 001222233333333346666667777888888889
Q ss_pred cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE--ECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 270 EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS--FQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 270 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
++++|+.+. ++..+.+.++++. ..++.+.|.++|+. +.+.. .....++|+++. +.++.++|+++|+++
T Consensus 280 ~~~~g~~~~-~~~~~~~~i~~~~----~~~~~~~l~~~gV~-v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 280 SKIPGIKVY-PSKTNFILVKFKD----ADYVYQGLLERGIL-VRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred HhCCCcEEC-cCCccEEEEEcCC----HHHHHHHHHHCCEE-EEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 888888764 4555555565542 56788888888854 43322 123568999764 478899999999875
Q ss_pred H
Q psy3048 348 S 348 (367)
Q Consensus 348 ~ 348 (367)
+
T Consensus 350 ~ 350 (351)
T PRK14807 350 L 350 (351)
T ss_pred h
Confidence 3
No 137
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.69 E-value=1.6e-14 Score=143.24 Aligned_cols=273 Identities=13% Similarity=0.051 Sum_probs=163.6
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
+.-.|++.+.++......++..|++++.+++++ ++.+|+++|++++.+..+++..+.++++++++|+||.+-+ ++
T Consensus 162 ~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~ 241 (481)
T PTZ00377 162 PSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVME 241 (481)
T ss_pred CCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHH
Confidence 344677788999999999999999999999863 4789999999999764333333567778899999999966 89
Q ss_pred hHHHHHhhcCcEEEEecccccccccCh-h---hhhhhCCCC-C----cc-eeeeccccccc--cCCcceeEEEe--cchh
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLP-E---YAHLKRGLE-Y----VD-SFAFNAHKWLL--TNHDCSAMWVK--NANH 169 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~-~---~~~~~~~~~-~----~D-~~~~~~hK~l~--~p~g~g~l~~~--~~~~ 169 (367)
+|+++|++||+++++|++|+-..+..+ . ......++. . .. ++..+..|.+. .+..+|+++.. .++.
T Consensus 242 ~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l 321 (481)
T PTZ00377 242 EIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV 321 (481)
T ss_pred HHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH
Confidence 999999999999999999976443111 1 111011110 0 01 34557899754 46778888763 3333
Q ss_pred hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH--hh
Q psy3048 170 LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS--YG 247 (367)
Q Consensus 170 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ 247 (367)
+.........+.. ...+....+..++.. .+
T Consensus 322 i~~l~~~~~~~~~------------------------------------------------~~~~~Q~a~~~~l~~~~~~ 353 (481)
T PTZ00377 322 REQIYKLASINLC------------------------------------------------SNVVGQLMTGLMCNPPREG 353 (481)
T ss_pred HHHHHHHhheecC------------------------------------------------CChHHHHHHHHHhCCCCCC
Confidence 3222110000000 000111222222211 00
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCch-----------HHHHHH-HHHhccC
Q psy3048 248 -------LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDND-----------LTNQLY-ERLMSHK 308 (367)
Q Consensus 248 -------~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~-----------~~~~l~-~~L~~~g 308 (367)
.+.+++..++..+..+++.+.|++++|+.+..|.....++.++..... ...+++ ..|.+.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~g 433 (481)
T PTZ00377 354 DASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTG 433 (481)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcC
Confidence 111223333456777888899988888887655443344434421111 022333 3445566
Q ss_pred cEEEEEeEEC---CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 309 QIYIIKASFQ---GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 309 ~~~~~~~~~~---~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+....++.+. +..++|+++. .++++++..++.|++++++.-
T Consensus 434 V~v~pG~~F~~~~~~~~~Rls~~---~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 434 IVVVPGSGFGQKPGTYHFRITIL---PPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred EEEeCCcccCCCCCCCEEEEEEC---CCHHHHHHHHHHHHHHHHHHH
Confidence 5444333332 3459999874 468899999999999888654
No 138
>PRK08912 hypothetical protein; Provisional
Probab=99.69 E-value=4.6e-15 Score=143.22 Aligned_cols=260 Identities=11% Similarity=-0.006 Sum_probs=165.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
.-.|++++.+|..+...++..|++++.++.++ ++.+|+++|++.+.+.+ .++++++++|+||.+.+ +++|
T Consensus 111 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 111 GDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHH
Confidence 34677788899999999999999999999863 68899999999886544 47778899999999865 7779
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
.++|++||+++++|++|+...+....... ...+....++++.+.+|.++.| ..+|+++... +......... ...
T Consensus 185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~~l~~~~-~~~- 261 (387)
T PRK08912 185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP-PLLRVLAKAH-QFL- 261 (387)
T ss_pred HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH-HHHHHHHHHH-hhc-
Confidence 99999999999999999754432111111 1112222368889999998733 5588888743 3222211000 000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.+ +. +. .....+..++.. ..+.+++..++..+..
T Consensus 262 -----------~~-------------------------------~~--~~-~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 295 (387)
T PRK08912 262 -----------TF-------------------------------TT--PP-NLQAAVAYGLGK-PDDYFEGMRADLARSR 295 (387)
T ss_pred -----------cc-------------------------------cC--Ch-HHHHHHHHHHhC-CHHHHHHHHHHHHHHH
Confidence 00 00 00 001111222221 2334566677788888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcC-C-chHHHHHHHHHh-ccCcEEEEEe-EE----CCeeEEEEEecCCCCCH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKG-D-NDLTNQLYERLM-SHKQIYIIKA-SF----QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~-~-~~~~~~l~~~L~-~~g~~~~~~~-~~----~~~~~lRi~~~~~~~~~ 334 (367)
+++.+.|+++ |+++..+.....++++++. . .....++.+.|. ++|+ .+.++ .+ .+.+++|++++. .+
T Consensus 296 ~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV-~v~pg~~f~~~~~~~~~iRl~~~~---~~ 370 (387)
T PRK08912 296 DRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV-AAIPVSAFYEEDPVTSVVRFCFAK---RD 370 (387)
T ss_pred HHHHHHHHhC-CCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE-EEecchhhCCCCCCCCEEEEEEeC---CH
Confidence 9999999887 7776544333345556643 1 123457888875 4564 44443 22 124699998864 47
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQSS 349 (367)
Q Consensus 335 edid~li~~l~~~~~ 349 (367)
++++..++.|++.++
T Consensus 371 ~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 371 ATLDEAVERLAAARR 385 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999988888755
No 139
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=2.3e-15 Score=146.36 Aligned_cols=277 Identities=14% Similarity=0.150 Sum_probs=165.4
Q ss_pred EEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+... .+...|+++++++ +.. |+++++++++++++ +|++.++.|++|.+.||++|++
T Consensus 110 ~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~~---d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~ 179 (437)
T PRK05613 110 HIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NPD---DPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAE 179 (437)
T ss_pred EEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CCC---CHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHH
Confidence 57777889988743 3456799999997 222 89999999987764 6667788899999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhh---c-cCCccccc
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNT---F-FTDRVYLK 182 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~---~-~~~~~yl~ 182 (367)
+||++|+.++||++++.+.... ..+ .| +|++++|+|||++++ -+.|.+++.++...... . ..-+..+.
T Consensus 180 la~~~gi~livD~t~a~g~~~~-p~~---~G---aDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~ 252 (437)
T PRK05613 180 VAHRNQVPLIVDNTIATAALVR-PLE---LG---ADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVT 252 (437)
T ss_pred HHHHcCCeEEEECCCccccccC-hHH---hC---CCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCC
Confidence 9999999999999997765432 211 23 599999999999865 34566666432210000 0 00000010
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... .... + ..++. ..+...... ..+....|....++..|.. ..|.+-+..+++++.+.+
T Consensus 253 ~~~~---~~~~-~-~~~~~-----~~~~~~~~~--------~~~~~~~G~~~~p~~a~l~--~rgl~TL~lR~~~~~~nA 312 (437)
T PRK05613 253 PDPA---YHGL-K-YADLG-----APAFGLKAR--------AGLLRDTGATLSPFNAWVT--AQGLDTLSLRLERHNENA 312 (437)
T ss_pred Cccc---cccc-c-ccccc-----hHHHHHHHH--------HHHHHhcCCCCCHHHHHHH--HcccCcHHHHHHHHHHHH
Confidence 0000 0000 0 00000 000000000 0011111222334455543 446778889999999999
Q ss_pred HHHHHHhcCCCCeE-EeCC-----C-------C-----ceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEe
Q psy3048 263 KKFADLVEKDDRFE-LVCP-----P-------S-----MGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKA 315 (367)
Q Consensus 263 ~~l~~~L~~~~g~~-~~~~-----~-------~-----~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~ 315 (367)
.++.+.|+++|.+. +..| | + .++++|.+.+..+....+.+.|.--.. +...|.
T Consensus 313 ~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~ 392 (437)
T PRK05613 313 IKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPA 392 (437)
T ss_pred HHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCC
Confidence 99999999999874 4443 1 1 348899986533344566666542110 001111
Q ss_pred --EE----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 316 --SF----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 316 --~~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.+ . .++.+|+|+. -||++.+++.|++.++.
T Consensus 393 ~~~h~~~~~~~~~~~Gi~~~liRlsvG-----lE~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 393 TTTHSQSDEAGLARAGITQATVRLSVG-----IEDIDDIIADLEGGFAA 436 (437)
T ss_pred ccCCccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 00 1 1468999774 36889999999988764
No 140
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=3.6e-15 Score=143.68 Aligned_cols=243 Identities=16% Similarity=0.167 Sum_probs=158.1
Q ss_pred EEEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+....+. ..|++++.++. .|+++|++++++++ .+|++++++|++|.+.|+++|++
T Consensus 102 ~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-----~d~e~l~~~i~~~t------klV~ie~p~NPtg~~~dl~~I~~ 170 (388)
T PRK07811 102 HIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-----SDLDAVRAAITPRT------KLIWVETPTNPLLSITDIAALAE 170 (388)
T ss_pred EEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-----CCHHHHHHhcCcCC------eEEEEECCCCCcceecCHHHHHH
Confidence 46667788876554432 25777777764 38999999997765 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|+++++|++++.+....+ .. . .+|+++++.+|++++|.+ .|+++.+++....+.. ++....
T Consensus 171 la~~~gi~lIvD~a~a~~~~~~p-~~---~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~-----~~~~~~ 238 (388)
T PRK07811 171 LAHDAGAKVVVDNTFASPYLQQP-LA---L---GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFA-----FLQNGA 238 (388)
T ss_pred HHHHcCCEEEEECCCCccccCCc-hh---h---CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHH-----HHHHhc
Confidence 99999999999999986543221 11 1 359999999999998765 5777776554332211 010000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+.....+..|..+ .+.+-+..++++..++++.+
T Consensus 239 ---------------------------------------------g~~~s~~~a~l~~--~~L~tl~~R~~~~~~na~~l 271 (388)
T PRK07811 239 ---------------------------------------------GAVPGPFDAYLTL--RGLKTLAVRMDRHSENAEAV 271 (388)
T ss_pred ---------------------------------------------CCCCCHHHHHHHH--hccCcHHHHHHHHHHHHHHH
Confidence 0000112223333 33445777888889999999
Q ss_pred HHHhcCCCCeE-EeCCC----------------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~ 317 (367)
.+.|+++|++. +..|. ..++++|.+++......++.+.|.-- + .+...+. .+
T Consensus 272 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~ 351 (388)
T PRK07811 272 AEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTH 351 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCc
Confidence 99999999876 44331 13689999975333345666655321 1 0111111 00
Q ss_pred -------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 -------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 -------~~--~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.| ++.+|+|+. -||.+.+++.|++.++
T Consensus 352 ~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~ 387 (388)
T PRK07811 352 ASTAGSQLEVPDDLVRLSVG-----IEDVADLLADLEQALG 387 (388)
T ss_pred ccCCHhhcCCCCCEEEEEeC-----CCCHHHHHHHHHHHhh
Confidence 11 468999774 3578888888888764
No 141
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.69 E-value=4.5e-15 Score=143.86 Aligned_cols=257 Identities=11% Similarity=0.028 Sum_probs=165.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|..+...+...|++++.++.++ ++.+|++++++++.+.+ .+|++++|+|+||.+-+ +++
T Consensus 117 Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~~~s~~~~~~ 190 (399)
T PRK07681 117 GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVPAMAHEDFFKE 190 (399)
T ss_pred CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcCcCCCHHHHHH
Confidence 34567778899999888999999999999864 36789999999886544 47888899999999966 788
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+........ +.+...-.++..+..|.++ ....+|+++.. ++.+...... ..+.
T Consensus 191 i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~~~~~~~-~~~~ 268 (399)
T PRK07681 191 VIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIVRALTQF-KSNT 268 (399)
T ss_pred HHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-HHHHHHHHHH-Hhhc
Confidence 8999999999999999998654422111110 0111112466678899986 34568988763 3333221100 0000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
. ++ ...+....+..++.. +...+++..++..+.
T Consensus 269 ------------~-------------------------------~~---~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~ 301 (399)
T PRK07681 269 ------------D-------------------------------YG---VFLPIQKAACAALRN-GAAFCEKNRGIYQER 301 (399)
T ss_pred ------------c-------------------------------cC---CCHHHHHHHHHHHhC-cHHHHHHHHHHHHHH
Confidence 0 00 000111222222221 223456666667788
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edi 337 (367)
.+++.+.|+++ |+++..++....++++++. .....++.+.|.+ .|+ .+.++. + .+.+++|+++. .+++++
T Consensus 302 ~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~-~~~~~~~~~~l~~~~gv-~v~pg~~f~~~~~~~iRis~~---~~~~~~ 375 (399)
T PRK07681 302 RDTLVDGFRTF-GWNVDKPAGSMFVWAEIPK-GWTSLSFAYALMDRANV-VVTPGHAFGPHGEGFVRIALV---QDEEVL 375 (399)
T ss_pred HHHHHHHHHHC-CCcccCCCeeeEEEEECCC-CCCHHHHHHHHHHhCCE-EEeCChhhCcCCCCeEEEEec---CCHHHH
Confidence 88888999887 7776555555566666653 2235678888877 564 454432 2 23469999875 258999
Q ss_pred HHHHHHHHHH
Q psy3048 338 AFAWNEISHQ 347 (367)
Q Consensus 338 d~li~~l~~~ 347 (367)
+.+++.|++.
T Consensus 376 ~~~l~~l~~~ 385 (399)
T PRK07681 376 QQAVENIRNS 385 (399)
T ss_pred HHHHHHHHHh
Confidence 9999999884
No 142
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=2.1e-16 Score=150.47 Aligned_cols=203 Identities=21% Similarity=0.196 Sum_probs=132.8
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC-----CCCcCH-----HHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-----NGVLRG-----DALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-----~~~~d~-----~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
+.-.|++++++|.|+..++.+.|+.++++++.+ -+.+++ +.+++++++..... .+.+|+++++ |+.|.
T Consensus 105 ~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~P-TY~Gv 182 (417)
T PF01276_consen 105 PGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSP-TYYGV 182 (417)
T ss_dssp TTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSE
T ss_pred CCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCC-CCCeE
Confidence 455788999999999999999999999998841 245666 99999998765321 1445777775 77999
Q ss_pred cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc-------eeeeccccccccCCcceeEEEecch-hh
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD-------SFAFNAHKWLLTNHDCSAMWVKNAN-HL 170 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D-------~~~~~~hK~l~~p~g~g~l~~~~~~-~~ 170 (367)
+.|+++|+++||++|++++||+|||+...+.+..... ... .+| +++.|.||.+.+..+++++.+++.. .-
T Consensus 183 ~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a-~~~-gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~ 260 (417)
T PF01276_consen 183 CYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSA-LAL-GADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVD 260 (417)
T ss_dssp EE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTC-SST-TSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTT
T ss_pred EECHHHHHHHhcccCCEEEEEccccccccCCCCccch-hhc-cCccccccceeeeechhhcccccccceEEEecCCCccc
Confidence 9999999999999999999999999987776432221 111 468 9999999999999999999998764 11
Q ss_pred hhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHH
Q psy3048 171 TNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLK 249 (367)
Q Consensus 171 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 249 (367)
...+. ..+.... +++++|.+ ...+-.+.+.+ +.+
T Consensus 261 ~~~~~--~~l~~~~-----TTSPSY~l--------------------------------------mASlD~a~~~m~~~~ 295 (417)
T PF01276_consen 261 HERVN--EALSMHQ-----TTSPSYPL--------------------------------------MASLDVARAQMEEEE 295 (417)
T ss_dssp HHHHH--HHHHHHS------SS--HHH--------------------------------------HHHHHHHHHHHSHHH
T ss_pred HHHHH--HHHHHHc-----CCChHHHH--------------------------------------HHHHHHHHHHHhhhh
Confidence 11110 0111010 23444411 12233333444 334
Q ss_pred HHHHHHHHHHHHHHHHHHHh---cCCCCeEEeCCC
Q psy3048 250 GLQAYLRKHISLAKKFADLV---EKDDRFELVCPP 281 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L---~~~~g~~~~~~~ 281 (367)
| ++.+++..++++.++++| +++++|+++.|+
T Consensus 296 G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 296 G-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred h-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 4 566778888889999998 778889888754
No 143
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.68 E-value=2.6e-15 Score=144.76 Aligned_cols=246 Identities=17% Similarity=0.203 Sum_probs=158.7
Q ss_pred EEEecCCcchh----HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s----~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+ +...+...|++++.++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 100 ~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-----d~e~l~~~i~~~t------klV~le~p~Np~G~v~dl~~I~~ 168 (391)
T TIGR01328 100 HLISDECLYGCTFALLEHALTKFGIQVDFINMA-----IPEEVKAHIKDNT------KIVYFETPANPTMKLIDMERVCR 168 (391)
T ss_pred EEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHHHHH
Confidence 45566666543 334455679999988865 8999999997765 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc-eeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC-SAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||++|+++++|++|+.+....+ . . ..+|+++.+++|+++++.+. |.+++.+++.+.+..........
T Consensus 169 la~~~gi~livD~a~a~~~~~~~-~---~---~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~---- 237 (391)
T TIGR01328 169 DAHSQGVKVIVDNTFATPMLTNP-V---A---LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT---- 237 (391)
T ss_pred HHHHcCCEEEEECCCchhccCCc-h---h---cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC----
Confidence 99999999999999976543211 1 1 14699999999999987542 33444455444332110000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+.....+..+..++ +.+.+..++++..++++++.
T Consensus 238 --------------------------------------------g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la 271 (391)
T TIGR01328 238 --------------------------------------------GSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVA 271 (391)
T ss_pred --------------------------------------------CCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHH
Confidence 00011123343333 34556777888999999999
Q ss_pred HHhcCCCCeEE-eCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE-
Q psy3048 267 DLVEKDDRFEL-VCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF- 317 (367)
Q Consensus 267 ~~L~~~~g~~~-~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~- 317 (367)
+.|+++|++.- ..| | ..++++|.+++......++.++|.-- + .+...|. .+
T Consensus 272 ~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~ 351 (391)
T TIGR01328 272 EYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHA 351 (391)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcceEecCCCCCcccCcCCCccccc
Confidence 99999998764 333 1 13589999875333345666655321 1 0001110 00
Q ss_pred ---------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 318 ---------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 318 ---------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
. ..+.+|+|+. -||++.+++.|++.++.
T Consensus 352 ~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 352 VVPKEEREAAGITDGMIRLSVG-----LEDADDLIADLKQALDA 390 (391)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHHHhh
Confidence 0 1458999774 36899999999988764
No 144
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.68 E-value=7.2e-15 Score=146.94 Aligned_cols=266 Identities=11% Similarity=0.006 Sum_probs=159.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++++.++..+...+...|++++.+++++ ++.+|+++|++++.+.+ .+|++++|+|+||.+-+ +++|
T Consensus 233 d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~------k~i~i~nP~NPTG~v~~~~~l~~i 306 (517)
T PRK13355 233 DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRT------KAIVIINPNNPTGALYPREVLQQI 306 (517)
T ss_pred CEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCc------eEEEEECCCCCCCcCcCHHHHHHH
Confidence 3566678899999999999999999998863 58899999999987665 47888999999999966 8999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceee-ecccccc-ccCCcceeEEEec-chhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFA-FNAHKWL-LTNHDCSAMWVKN-ANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l-~~p~g~g~l~~~~-~~~~~~~~~~~~~yl~ 182 (367)
+++|++||+++++|++|.-..+....+.....-....-+++ .+..|.+ .++..+|+++... .+.++.....- ..+.
T Consensus 307 ~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l-~~~~ 385 (517)
T PRK13355 307 VDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGL-NMLA 385 (517)
T ss_pred HHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHH-HHHh
Confidence 99999999999999999754432111111100011112343 4568986 4457799988643 22111100000 0000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh--HHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG--LKGLQAYLRKHIS 260 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~~~~~~~~~~ 260 (367)
.. . ++ ...+....+..+|.... .+-+++ .++..+
T Consensus 386 ~~---------~-------------------------------~~---~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~ 421 (517)
T PRK13355 386 NM---------R-------------------------------LC---SNVPAQSIVQTALGGHQSVKDYLVP-GGRVYE 421 (517)
T ss_pred cC---------c-------------------------------CC---cChHHHHHHHHHhcCCccHHHHHHH-HHHHHH
Confidence 00 0 00 00011112222221100 112222 234455
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCCc---hHHHHHH-HHHhccCcEEEEEeEEC--CeeEEEEEecCCCCC
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCF-RLKGDN---DLTNQLY-ERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETN 333 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~---~~~~~l~-~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~ 333 (367)
..+++.+.|++++|+++.. |..+...| +++... ....+++ +.|.++|+....++.+. +.+++|+++. .+
T Consensus 422 ~r~~l~~~L~~~~g~~~~~-p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~ 497 (517)
T PRK13355 422 QRELVYNALNAIPGISAVK-PKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PR 497 (517)
T ss_pred HHHHHHHHHhcCCCcccCC-CCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CC
Confidence 6788899999888887654 44444433 554310 1133444 44566675443333332 4679999773 47
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy3048 334 QCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~ 351 (367)
+++++..++.|.++++..
T Consensus 498 ~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 498 LEDLEDAMDRLADFFSYY 515 (517)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999987653
No 145
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.68 E-value=4e-15 Score=141.77 Aligned_cols=252 Identities=12% Similarity=0.061 Sum_probs=159.7
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC-C-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD-D-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|++++.++..+...++..|++++.++.+ + ++.+|++++++++++.+ .++++++++|+||.+.| +++|+
T Consensus 89 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~~~~~~~~l~ 162 (350)
T TIGR03537 89 RVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGATAPRSYLKETI 162 (350)
T ss_pred eEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCcccCHHHHHHHH
Confidence 67778899999999999999999999985 3 46789999999987755 47778889999999877 89999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++|++||+++++|++|+-..+..+.......+.+ -.++..+.+|.++.| ..+|+++. ++............+ ...
T Consensus 163 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~-~~~- 238 (350)
T TIGR03537 163 AMCREHGIILCSDECYTEIYFGEPPHSALEVGIE-NVLAFHSLSKRSGMTGYRSGFVAG-DEKLISFLRKLRANF-GVA- 238 (350)
T ss_pred HHHHHcCcEEEEeccccccccCCCCCchhhcCcC-CEEEEeecccccCCccccceeeec-CHHHHHHHHHHHHhh-ccC-
Confidence 9999999999999999754332111000001111 135666889988544 45777764 333232211100000 000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+..+....+..++. ..+.+++..++..+..+++
T Consensus 239 ---------------------------------------------~~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~ 271 (350)
T TIGR03537 239 ---------------------------------------------SPDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLF 271 (350)
T ss_pred ---------------------------------------------CCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHH
Confidence 00000111112221 2334566667777888888
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EE--CCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SF--QGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~--~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.+.|++. |+++..+.....+.+.++. .....++.+.|.++|+ .+.++ .+ .+..++|+++. .++++++..++
T Consensus 272 ~~~l~~~-g~~~~~~~g~~~~~~~~~~-~~~~~~l~~~L~~~gv-~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~ 345 (350)
T TIGR03537 272 IEFFNKV-GLEYLYPDATFYLWVKVPS-GIDAKDYALRLLENGI-VVAPGENFGSGEEGYVRVALV---PTLEECEEALR 345 (350)
T ss_pred HHHHHHC-CCcccCCCeEEEEEEECCC-CCCHHHHHHHHHHCCE-EEcCchhhCCCCCCEEEEEec---CCHHHHHHHHH
Confidence 8888886 7765543322334556653 2235688999988885 44433 22 22568999763 36788988888
Q ss_pred HHHH
Q psy3048 343 EISH 346 (367)
Q Consensus 343 ~l~~ 346 (367)
.|++
T Consensus 346 ~~~~ 349 (350)
T TIGR03537 346 LWER 349 (350)
T ss_pred HHhc
Confidence 8765
No 146
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.68 E-value=1.1e-14 Score=140.75 Aligned_cols=264 Identities=10% Similarity=0.102 Sum_probs=162.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~ 106 (367)
-.|++.+.+|..+...++..|++++.++.++ ++.+|+++|++++++..+ .+.++++++++|+||.+- ++++|+
T Consensus 116 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~~~~i~l~~P~NPtG~~~s~~~~~~l~ 192 (391)
T PRK07309 116 DKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGD---KLKAVILNYPANPTGVTYSREQIKALA 192 (391)
T ss_pred CEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCC---CeEEEEEECCCCCCCcCcCHHHHHHHH
Confidence 3566677888888888999999999999864 468999999999865321 135788888999999974 589999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++|++||+++++|++|+...+..............-.++..+.+|.++.| ..+|+++... +.+..... ...+....
T Consensus 193 ~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~~~~~-~~~~~~~~- 269 (391)
T PRK07309 193 DVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA-EFTAQLIK-SHQYLVTA- 269 (391)
T ss_pred HHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH-HHHHHHHH-HHhhcccC-
Confidence 99999999999999997654421111000000011136777899998644 5578877643 33322110 00111000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
...+....+...++. +........++..+.++++
T Consensus 270 ---------------------------------------------~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK07309 270 ---------------------------------------------ATTMAQFAAVEALTN-GKDDALPMKKEYIKRRDYI 303 (391)
T ss_pred ---------------------------------------------CChHHHHHHHHHHhC-ChhHHHHHHHHHHHHHHHH
Confidence 000111122222221 1111233445566777888
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCC-chHHHHHHHHHh-ccCcEEEEEeEE---CCeeEEEEEecCCCCCHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGD-NDLTNQLYERLM-SHKQIYIIKASF---QGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~-~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~edid~l 340 (367)
.+.|++. |+.+..+.....++++++.. .....++.+++. +.| +.+.++.. .+..++|+++.. +.++++..
T Consensus 304 ~~~l~~~-~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~ 378 (391)
T PRK07309 304 IEKMTDL-GFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKA-VAFIPGAAFGPYGEGYVRLSYAA---SMETIKEA 378 (391)
T ss_pred HHHHHHC-CCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEecC---CHHHHHHH
Confidence 8889887 77765443333344455431 113457787765 456 44544432 235699997753 57899999
Q ss_pred HHHHHHHHHHh
Q psy3048 341 WNEISHQSSEM 351 (367)
Q Consensus 341 i~~l~~~~~~~ 351 (367)
+++|+++++++
T Consensus 379 i~~l~~~~~~~ 389 (391)
T PRK07309 379 MKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHhh
Confidence 99999988764
No 147
>PLN02187 rooty/superroot1
Probab=99.68 E-value=8.2e-15 Score=144.30 Aligned_cols=273 Identities=7% Similarity=-0.006 Sum_probs=170.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.++..+...+...|++++.++.. +++.+|+++|++++++.+ .++++++|+|+||.+-+ +++
T Consensus 155 Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG~v~s~e~l~~ 228 (462)
T PLN02187 155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCGNVYSHDHLKK 228 (462)
T ss_pred CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCCCccCHHHHHH
Confidence 3456667788888888888999999999874 468999999999886654 48889999999999855 889
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhh-h--hhccCCc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHL-T--NTFFTDR 178 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~-~--~~~~~~~ 178 (367)
|+++|++||+++++|++|+-..+....+.. .+... .--++..+..|.+..| ..+|+++..++..+ . +.+....
T Consensus 229 i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~-~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~ 307 (462)
T PLN02187 229 VAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASI-VPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIK 307 (462)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCCceeHHHhccC-CcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHH
Confidence 999999999999999999765442211101 11111 0124556789995555 78999887543211 0 1110000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
.+.. +.. +...+...++..++.....+.+++..+..
T Consensus 308 ~~~~-------------------------------------------~~~-~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l 343 (462)
T PLN02187 308 QNLD-------------------------------------------VTP-DPATIIQAALPAILEKADKNFFAKKNKIL 343 (462)
T ss_pred Hhcc-------------------------------------------ccC-CCCHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 0000 000 00011122223333321235577777788
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCC-CceeEEEEEcCC--c--hHHHHHHHHH-hccCcEEEEEeEECCeeEEEEEecCCCC
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPP-SMGLVCFRLKGD--N--DLTNQLYERL-MSHKQIYIIKASFQGRPFLRFVVTSPET 332 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~--~--~~~~~l~~~L-~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 332 (367)
.+..+++.+.|++++++..+..| ..+.+.+++... . ....+++.++ .++|+....+..+...+++|+++..
T Consensus 344 ~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--- 420 (462)
T PLN02187 344 KHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--- 420 (462)
T ss_pred HHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC---
Confidence 88889999999988654433334 445555555310 1 1133555544 5667544433334446799998753
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCC
Q psy3048 333 NQCDVAFAWNEISHQSSEMNLPRG 356 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~~~~~~~ 356 (367)
.+++++..++.|.+++++..++..
T Consensus 421 ~~e~l~~al~rL~~~l~~~~~~~~ 444 (462)
T PLN02187 421 EAHMLEDALERLKGFCTRHAKKTE 444 (462)
T ss_pred CHHHHHHHHHHHHHHHHHhhhccc
Confidence 589999999999999987765553
No 148
>PRK09082 methionine aminotransferase; Validated
Probab=99.68 E-value=2.2e-15 Score=145.47 Aligned_cols=257 Identities=11% Similarity=0.008 Sum_probs=163.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
.-.|++++..|.++...++..|++++.++.+ +++.+|++++++++++.+ .+|++++++|+||.+ +++++|
T Consensus 115 gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~i 188 (386)
T PRK09082 115 GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRT------RLIILNTPHNPSGTVWSAADMRAL 188 (386)
T ss_pred CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccc------eEEEEeCCCCCCCcCCCHHHHHHH
Confidence 4467778889999999999999999999986 468999999999987644 477788999999987 789999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
.++|++||+++++|++|+...+....... ...+...-.++..+..|.++.| ..+|+++.. ++.+..... ...+.
T Consensus 189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~~~~~-~~~~~- 265 (386)
T PRK09082 189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSAEFRK-VHQYN- 265 (386)
T ss_pred HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHHHHHH-HHhhh-
Confidence 99999999999999999765442211111 1112222357777889998644 568888864 332221100 00000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.++. ..+.+..+...+.. ..+.+++..+...+..
T Consensus 266 ------------------------------------------~~~~---~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 299 (386)
T PRK09082 266 ------------------------------------------TFTV---NTPAQLALADYLRA-EPEHYLELPAFYQAKR 299 (386)
T ss_pred ------------------------------------------cCCC---ChHHHHHHHHHHhC-ChHHHHHHHHHHHHHH
Confidence 0000 00111112222221 3445666667778888
Q ss_pred HHHHHHhcCCCCeEEeCCCCce-eEEEEEcC-CchHHHHHHHHHhccCcEEEEEeE-E----CCeeEEEEEecCCCCCHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMG-LVCFRLKG-DNDLTNQLYERLMSHKQIYIIKAS-F----QGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~-~v~f~~~~-~~~~~~~l~~~L~~~g~~~~~~~~-~----~~~~~lRi~~~~~~~~~e 335 (367)
+++.+.|++. |+++.. +..+ .++++++. .+....++.+.|.++..+.+.++. + .+.+++|++++. +++
T Consensus 300 ~~~~~~L~~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~---~~~ 374 (386)
T PRK09082 300 DRFRAALANS-RFKLLP-CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK---QEE 374 (386)
T ss_pred HHHHHHHHhC-CCcccC-CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC---CHH
Confidence 8899999885 777654 3434 34556642 122356788877544334554442 2 124699998753 588
Q ss_pred HHHHHHHHHHH
Q psy3048 336 DVAFAWNEISH 346 (367)
Q Consensus 336 did~li~~l~~ 346 (367)
+++..++.|++
T Consensus 375 ~l~~~~~rl~~ 385 (386)
T PRK09082 375 TLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHhh
Confidence 88888888765
No 149
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.68 E-value=9.3e-15 Score=142.24 Aligned_cols=264 Identities=13% Similarity=0.068 Sum_probs=167.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|++++.+|..+...++..|++++.++.+ +++.+|+++|++++++.+ .+|++++++|+||.+ +++++|
T Consensus 129 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~p~NPtG~~~s~~~~~~l 202 (412)
T PTZ00433 129 DNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRT------KALIMTNPSNPCGSNFSRKHVEDI 202 (412)
T ss_pred CEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCc------eEEEEeCCCCCCCcccCHHHHHHH
Confidence 456677888999999999999999999985 357899999999887644 477889999999987 457888
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCC-C-cceeeecccccc-ccCCcceeEEEecc-----hhhhhhccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-Y-VDSFAFNAHKWL-LTNHDCSAMWVKNA-----NHLTNTFFTD 177 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~-~-~D~~~~~~hK~l-~~p~g~g~l~~~~~-----~~~~~~~~~~ 177 (367)
+++|++||+++++|++|....+....+.. ...+. . .-+++.+..|.+ .....+|+++..++ ..+.......
T Consensus 203 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~ 281 (412)
T PTZ00433 203 IRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG 281 (412)
T ss_pred HHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh
Confidence 99999999999999999754432111111 01111 1 125667789998 45578999887332 1121110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
... +. ...+....+..++..-....+++..++
T Consensus 282 --~~~-------------------------------------------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~ 313 (412)
T PTZ00433 282 --MLV-------------------------------------------CG---PCSVVQAALGEALLNTPQEHLEQIVAK 313 (412)
T ss_pred --hcc-------------------------------------------CC---CChHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 000 00 000111111222221113446667777
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC---c-hHHHHHHHHHhc-cCcEEEEEeEECCeeEEEEEecCCCC
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD---N-DLTNQLYERLMS-HKQIYIIKASFQGRPFLRFVVTSPET 332 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~---~-~~~~~l~~~L~~-~g~~~~~~~~~~~~~~lRi~~~~~~~ 332 (367)
..+..+++.+.|+++.|+.+..|.....+.++++.. + ....++.+.|.+ +|+....+..+...+++|+++..
T Consensus 314 ~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--- 390 (412)
T PTZ00433 314 LEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--- 390 (412)
T ss_pred HHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC---
Confidence 888888899999887677655444445566666431 0 124678888875 57543333333345799998753
Q ss_pred CHHHHHHHHHHHHHHHHHhh
Q psy3048 333 NQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~~~ 352 (367)
.+++++..++.|.+++++..
T Consensus 391 ~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 391 PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred CHHHHHHHHHHHHHHHHHhc
Confidence 47889999999999887644
No 150
>PRK08363 alanine aminotransferase; Validated
Probab=99.68 E-value=8.5e-15 Score=141.90 Aligned_cols=264 Identities=11% Similarity=0.001 Sum_probs=163.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEE-ecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQL-RSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v-~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|..+...++..|.+++.+ +.+ +++.+|+++|++++.+.+ .+|++++++|+||.+-+ +++
T Consensus 117 gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~ 190 (398)
T PRK08363 117 GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT------KAIAVINPNNPTGALYEKKTLKE 190 (398)
T ss_pred CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce------EEEEEECCCCCCCcCcCHHHHHH
Confidence 3457777889999999999999988888 444 456799999999886544 47778899999999866 899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEe-cchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVK-NANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~-~~~~~~~~~~~~~~yl 181 (367)
|+++|+++|+++++|++|+...+...... ..+... .--++..+.+|++. .+.++|+++.. .+..+.........+.
T Consensus 191 l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~ 269 (398)
T PRK08363 191 ILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKD-VPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLA 269 (398)
T ss_pred HHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcC-CcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHh
Confidence 99999999999999999976443211100 011111 01244668899954 45778998873 2322221110000000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
.. .+. ...+....+..++.. ..+.+++..++..+.
T Consensus 270 -~~----------------------------------------~~~---~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~ 304 (398)
T PRK08363 270 -RI----------------------------------------RLC---PNTPAQFAAIAGLTG-PMDYLEEYMKKLKER 304 (398)
T ss_pred -cc----------------------------------------ccc---CChHHHHHHHHHHhC-ChHHHHHHHHHHHHH
Confidence 00 000 000111222222322 245667777788888
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCC-chHHHHHHH-HHhccCcEEEEEeE-EC--CeeEEEEEecCCCCCHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCF-RLKGD-NDLTNQLYE-RLMSHKQIYIIKAS-FQ--GRPFLRFVVTSPETNQC 335 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~-~~~~~~l~~-~L~~~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~e 335 (367)
.+++.+.|++++++.+. +|..+.+.+ ++++. .....++.. .|.++|+. +.++. +. +..++|+++. .+++
T Consensus 305 ~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~-v~~g~~f~~~~~~~iRis~~---~~~~ 379 (398)
T PRK08363 305 RDYIYKRLNEIPGISTT-KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVL-FVHGSGFGEYGAGHFRLVFL---PPVE 379 (398)
T ss_pred HHHHHHHHhcCCCCEec-CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEE-EeCchhhCCCCCCeEEEEec---CCHH
Confidence 89999999888887754 444455444 55431 012344544 45667754 44332 22 3469999764 2588
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 336 DVAFAWNEISHQSSE 350 (367)
Q Consensus 336 did~li~~l~~~~~~ 350 (367)
+++..++.|++++.+
T Consensus 380 ~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 380 ILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987665
No 151
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=5.3e-15 Score=142.78 Aligned_cols=247 Identities=17% Similarity=0.186 Sum_probs=161.6
Q ss_pred EEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+... .+...|+++++++. .|++++++++++++ .+|.+.+++|++|.+.|+++|++
T Consensus 105 ~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~~~t------klV~ie~p~NPtg~v~dl~~I~~ 173 (398)
T PRK08249 105 RVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIAKGC------DLLYLETPTNPTLKIVDIERLAA 173 (398)
T ss_pred EEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcCCCC------eEEEEECCCCCCCccCCHHHHHH
Confidence 56677788877543 34457888887764 48999999997765 48888899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||+||+++++|++|+.+....+ . . ..+|+++.+.+|+++++.. .|++++.+++...+..... ...
T Consensus 174 la~~~gi~livD~t~a~~~~~~~-l---~---~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~~----- 240 (398)
T PRK08249 174 AAKKVGALVVVDNTFATPINQNP-L---A---LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EIN----- 240 (398)
T ss_pred HHHHcCCEEEEECCcCccccCCc-h---h---hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hhc-----
Confidence 99999999999999986433211 1 1 1459999999999987643 3444444444333221000 000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+.....+..+..++ +.+-+..++++..++++.+.
T Consensus 241 --------------------------------------------g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la 274 (398)
T PRK08249 241 --------------------------------------------GATMDPMSAYLILR--GMKTLKLRVRQQQESAMALA 274 (398)
T ss_pred --------------------------------------------CCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHH
Confidence 00011233343333 45667788889999999999
Q ss_pred HHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE-
Q psy3048 267 DLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF- 317 (367)
Q Consensus 267 ~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~- 317 (367)
+.|+++|.++ +..| | ..++++|.+.+......++.+.|.-- + .....|. .+
T Consensus 275 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~ 354 (398)
T PRK08249 275 KYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHV 354 (398)
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCCceeeCCcccccc
Confidence 9999998876 4443 1 24688999875333345666665321 1 0111111 00
Q ss_pred ---------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 318 ---------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 318 ---------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
. .++.+|+|+. -||++.+++.|++.++.+..
T Consensus 355 ~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 355 ENTLEERAALGIPEGLVRISVG-----IEDTEDLIADLEQAFAHLES 396 (398)
T ss_pred cCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHHhhh
Confidence 0 1468999774 36889999999998886554
No 152
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.67 E-value=1.6e-14 Score=140.11 Aligned_cols=265 Identities=12% Similarity=0.014 Sum_probs=166.1
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~ 106 (367)
.|++++.++..+...++..|++++.++++ +++.+|++.|++++++.+ .++++++++|+||.+- ++++|+
T Consensus 121 ~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~~~~~~~~l~ 194 (401)
T TIGR01264 121 NILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCGSVFSRQHLEEIL 194 (401)
T ss_pred EEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 45566778888888888899999998875 357899999999886644 3778899999999984 588999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCC-CCc-ceeeeccccc-cccCCcceeEEEecch-hhhhhccCCccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYV-DSFAFNAHKW-LLTNHDCSAMWVKNAN-HLTNTFFTDRVYLK 182 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~-D~~~~~~hK~-l~~p~g~g~l~~~~~~-~~~~~~~~~~~yl~ 182 (367)
++|+++|+++++|++|..+.+....... +..+ ... -+++.+..|. +.....+|+++..+.. .+......-..+..
T Consensus 195 ~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~ 273 (401)
T TIGR01264 195 AVAERQCLPIIADEIYGDMVFSGATFEP-LASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ 273 (401)
T ss_pred HHHHHCCCEEEEEhhhhhhccCCccccc-HHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhh
Confidence 9999999999999999765442211111 0111 111 2567778997 5545778988875421 11111000000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. +.. ..+....+...+.....+.+++..++..+..
T Consensus 274 ~~-----------------------------------------~~~---~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r 309 (401)
T TIGR01264 274 RI-----------------------------------------LGP---CTIVQGALPSILLRTPQEYFDGTLSVLESNA 309 (401)
T ss_pred cc-----------------------------------------CCC---CcHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 00 000 0011122222332212345667777788888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCC----chHHHHHHHHHh-ccCcEEEEEe-EECCeeEEEEEecCCCCCHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGD----NDLTNQLYERLM-SHKQIYIIKA-SFQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~----~~~~~~l~~~L~-~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~ed 336 (367)
+++.+.|++++|+....|...+.++++++.. .....++.+.+. +.|+ .+.++ .+...+++|+++.. .+++
T Consensus 310 ~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI-~v~pg~~f~~~~~iRis~~~---~~~~ 385 (401)
T TIGR01264 310 MLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSV-FCLPGSCFEYPGFFRVVLTV---PVVM 385 (401)
T ss_pred HHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCE-EEeCchhcCCCCeEEEEEcC---CHHH
Confidence 8899999888777655555555666665320 112467777775 5675 44443 33346799998753 4789
Q ss_pred HHHHHHHHHHHHHHh
Q psy3048 337 VAFAWNEISHQSSEM 351 (367)
Q Consensus 337 id~li~~l~~~~~~~ 351 (367)
++..++.|.++++++
T Consensus 386 l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 386 MEEACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999998887653
No 153
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.67 E-value=9.6e-15 Score=140.82 Aligned_cols=256 Identities=11% Similarity=0.031 Sum_probs=160.2
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
+.-.|++.+.++......++..|++++.++.+. ++.+|++++++++.+.+ .+|++++++|+||.+-+ ++
T Consensus 114 ~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~i~~P~NPtG~~~~~~~~~ 187 (383)
T TIGR03540 114 PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKA------KLMFINYPNNPTGAVAPLKFFK 187 (383)
T ss_pred CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccc------eEEEEeCCCCCcCccCCHHHHH
Confidence 345677788888888888889999999999863 46789999999886544 47888889999999976 78
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|+++|++||+++++|++|+-..+....... .+.+.....+...+..|.++.| ..+|+++.. ++.+....... .+
T Consensus 188 ~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~~~~~~~~-~~ 265 (383)
T TIGR03540 188 ELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLIAGLGKVK-TN 265 (383)
T ss_pred HHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHHHHHHHHH-Hh
Confidence 9999999999999999999754332111000 0111111246667888988533 448888653 33332211000 00
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
.... ........+..++.. +.+.+++..++..+
T Consensus 266 ~~~~----------------------------------------------~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~ 298 (383)
T TIGR03540 266 VDSG----------------------------------------------VFQAIQYAAIAALNG-PQDVVKEIRKIYQR 298 (383)
T ss_pred cccC----------------------------------------------CChHHHHHHHHHHhC-CHHHHHHHHHHHHH
Confidence 0000 000111222222322 24456666777788
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEE---CCeeEEEEEecCCCCCHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASF---QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~---~~~~~lRi~~~~~~~~~ed 336 (367)
..+++.+.|++. |+.+..+.....+++++++ .....++.+.|.+ .| +.+.++.. .+.+++|+++.. ++++
T Consensus 299 ~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ll~~~g-i~v~~g~~f~~~~~~~~Ris~~~---~~~~ 372 (383)
T TIGR03540 299 RRDLLLEALKKI-GIDVEKPKATFYVWVPVPE-GYTSAEFAARLLEETG-VVVTPGVGFGEYGEGYIRISLTV---PDER 372 (383)
T ss_pred HHHHHHHHHHhC-CCEecCCCcceEEEEECCC-CCCHHHHHHHHHHHCC-EEEecchhhCccCCCeEEEEecC---CHHH
Confidence 889999999887 7877654443345666653 2335678888764 56 44544322 234699998742 4666
Q ss_pred HHHHHHHHH
Q psy3048 337 VAFAWNEIS 345 (367)
Q Consensus 337 id~li~~l~ 345 (367)
+...++.|.
T Consensus 373 l~~~l~~l~ 381 (383)
T TIGR03540 373 LEEAVARIK 381 (383)
T ss_pred HHHHHHHHh
Confidence 766666654
No 154
>PRK09265 aminotransferase AlaT; Validated
Probab=99.67 E-value=1.4e-14 Score=140.75 Aligned_cols=265 Identities=11% Similarity=0.001 Sum_probs=159.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++++.+|..+..++...|.+++.++++. ++.+|+++|++++++.+ .+|++++++|+||.+.+ +++|
T Consensus 120 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i 193 (404)
T PRK09265 120 DEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEI 193 (404)
T ss_pred CEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHH
Confidence 3566788999999998888999998888753 57799999999886654 47888899999999987 8999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCccee-eecccccccc-CCcceeEEEecchh-hhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSF-AFNAHKWLLT-NHDCSAMWVKNANH-LTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~-~~~~hK~l~~-p~g~g~l~~~~~~~-~~~~~~~~~~yl~ 182 (367)
+++|++||+++++|++|+...+..........-.....++ ..+..|.++. ...+|+++...... ........ ..+.
T Consensus 194 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~-~~~~ 272 (404)
T PRK09265 194 VEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGL-DMLA 272 (404)
T ss_pred HHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHH-HHHh
Confidence 9999999999999999975443211111100001112334 4556899854 46688888642221 11110000 0000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHH---HHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAY---LRKHI 259 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~---~~~~~ 259 (367)
... +. ...+....+..+|.. .+.+.+. .++..
T Consensus 273 ~~~----------------------------------------~~---~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~ 307 (404)
T PRK09265 273 SMR----------------------------------------LC---ANVPAQHAIQTALGG--YQSINELILPGGRLY 307 (404)
T ss_pred ccc----------------------------------------cC---CCcHHHHHHHHHhcC--chhHHHHHHHHHHHH
Confidence 000 00 000111122222221 1112222 23455
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc----hHHHHHHHHHhccCcEEEEEeEE--CCeeEEEEEecCCCCC
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN----DLTNQLYERLMSHKQIYIIKASF--QGRPFLRFVVTSPETN 333 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~--~~~~~lRi~~~~~~~~ 333 (367)
+..+.+.+.|++++|+++..|.....++++++... ...+.+.+.+.++|+....+..+ .+..++|+++. .+
T Consensus 308 ~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~ 384 (404)
T PRK09265 308 EQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PR 384 (404)
T ss_pred HHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CC
Confidence 66778888888887877655544455555665311 12345666677777543333332 23569999773 47
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQSSE 350 (367)
Q Consensus 334 ~edid~li~~l~~~~~~ 350 (367)
+++++..++.|+++++.
T Consensus 385 ~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 385 VDDLEEAIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999988764
No 155
>KOG1368|consensus
Probab=99.67 E-value=2.2e-15 Score=133.11 Aligned_cols=256 Identities=15% Similarity=0.158 Sum_probs=166.0
Q ss_pred CceEEEecCCcchhHHHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHh-h-CCCccEEEEEecCCCccc-ccCCh
Q psy3048 29 SRLVAYASDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDL-A-KGLIPCCLVATLGTTGTC-AFDNL 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~-~-~~~~~~~vv~~~~~t~~G-~i~dl 102 (367)
+...|++.+.+|.-.++.. .+.|+.++.|...+++.|+++++|+++.... . +.....+|++..-.+..| .+-|+
T Consensus 95 rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPl 174 (384)
T KOG1368|consen 95 RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPL 174 (384)
T ss_pred CCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeH
Confidence 4578899999999877754 3578999999998999999999999998432 1 233335777776666677 55555
Q ss_pred ---hhHHHHHhhcCcEEEEecccc---cccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC
Q psy3048 103 ---EELGPICQEYNIWLHVDAAYA---GSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT 176 (367)
Q Consensus 103 ---~~I~~l~~~~gi~l~vD~a~~---~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 176 (367)
++|.++|+++|+.+|.|||.= +....++ .+... +.+|+++.+..|.+++|.| -+++.+..++.++.
T Consensus 175 e~~~~v~~lak~~glkLH~DGARi~NAavasgV~-vk~i~---~~fDSVsiCLSKglgAPVG--SViVG~k~FI~kA~-- 246 (384)
T KOG1368|consen 175 EELDRVKALAKRHGLKLHMDGARIFNAAVASGVP-VKKIC---SAFDSVSICLSKGLGAPVG--SVIVGSKDFIDKAR-- 246 (384)
T ss_pred HHHHHHHHHHhccCCeeecchhhhhhHHHHcCCC-HHHHH---HhhhhhhhhhhccCCCCcc--cEEEccHHHHHHHH--
Confidence 566778999999999999742 1111111 11111 3459999999999999955 56665666555432
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYL 255 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~ 255 (367)
|+.|.++ ++ .+...+.++..... .+.+. ..
T Consensus 247 -----------------------~~RKalG-----------------------GG--mRQsGvLaaaaLval~~~~~-~L 277 (384)
T KOG1368|consen 247 -----------------------HFRKALG-----------------------GG--MRQSGVLAAAALVALDENVP-LL 277 (384)
T ss_pred -----------------------HHHHHhc-----------------------Cc--hhHHHHHHHHHHHHhhcchH-HH
Confidence 1111110 00 01111121111111 12222 34
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCH
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ 334 (367)
++-++.++.+.+.+++.+++++-.+ .+++++...+.......+++.+++.+.|+..+.. ....+|+++ ++-.+.
T Consensus 278 ~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~----~s~r~Rivl-h~Qvt~ 352 (384)
T KOG1368|consen 278 RADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGG----ASRRIRIVL-HHQVTD 352 (384)
T ss_pred HHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeec----cccceEEEE-EEecCH
Confidence 4556666667777777777887655 5788888766443445679999999999765542 223489954 788899
Q ss_pred HHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISH 346 (367)
Q Consensus 335 edid~li~~l~~ 346 (367)
++++.++..+++
T Consensus 353 ~~ve~~~~~~~k 364 (384)
T KOG1368|consen 353 EDVEYVKSVLSK 364 (384)
T ss_pred HHHHHHHHHHHH
Confidence 999999999954
No 156
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=4e-15 Score=141.79 Aligned_cols=248 Identities=11% Similarity=0.019 Sum_probs=157.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|..+...++..|++++.++.++++.+|++++++++ +.+ .+|++++++|+||.+.+.+++.++++
T Consensus 100 ~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~~~------~lv~l~nPnNPTG~~~~~~~l~~l~~ 172 (351)
T PRK01688 100 DAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL-DGV------KVVYVCSPNNPTGNLINPQDLRTLLE 172 (351)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc-cCC------cEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 46777788999888889999999999999878999999999887 333 47888999999999987777666654
Q ss_pred h--cCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 E--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
. .++++++|++|.-+... ......+..... -++.-+.+|+++. +..+|+++.. ++.++.......+
T Consensus 173 ~~~~~~~vivDEay~~f~~~-~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~-~~~i~~l~~~~~~-------- 241 (351)
T PRK01688 173 LTRGKAIVVADEAYIEFCPQ-ASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN-EEVINLLLKVIAP-------- 241 (351)
T ss_pred hCCCCcEEEEECchhhcCCC-CChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC-HHHHHHHHhccCC--------
Confidence 3 26899999998654311 111111111111 2566678998863 3456887753 3333221110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
| ... . .......++|...+.+.+++..++..+.++++.+
T Consensus 242 -------~-------------------------------~v~--~-~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~ 280 (351)
T PRK01688 242 -------Y-------------------------------PLS--T-PVADIAAQALSPQGIAAMRERVAEINANRQWLIA 280 (351)
T ss_pred -------C-------------------------------CCC--H-HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0 0001111222211223456666677778889999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.|++++++....|+..+.+.+++.. ..++.+.|.++|+........ ...+++||++. +++|+++++++|+
T Consensus 281 ~L~~~~~~~~~~ps~~nfi~~~~~~----~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 281 ALKEIPCVEQVFDSETNYILARFTA----SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred HHHhCCCCCeECCCCCcEEEEEcCC----HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 9998888754556666777776642 568888999888543332222 22569999764 5899999999874
No 157
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.4e-14 Score=132.14 Aligned_cols=265 Identities=16% Similarity=0.216 Sum_probs=164.8
Q ss_pred HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 43 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 43 ~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
+.......|+++++|+.+ |++.++++|+++|| +|.+....||-+.+-|+++|+++||++|++++||...
T Consensus 118 f~~tl~~~Gi~v~fvd~~-----d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~ 186 (426)
T COG2873 118 FSHTLKRLGIEVRFVDPD-----DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTF 186 (426)
T ss_pred HHHHHHhcCcEEEEeCCC-----CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCC
Confidence 334456689999999876 89999999999996 6666666789999999999999999999999999998
Q ss_pred ccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhh-ccCCccccccCCCCCCCCCCCchhhhh
Q psy3048 123 AGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNT-FFTDRVYLKHTDAPMNTQSPDYTVMNW 200 (367)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~ 200 (367)
+..++ +.+++. | +|+++.|..||+++- ..+|.+++.... +.-. ...-|.|-..... -....| ..
T Consensus 187 atpyl-~rP~~h---G---ADIVvHS~TK~igGhGt~iGG~iVD~G~-FDw~~~~rfP~~~~p~p~---YhGl~~--~~- 252 (426)
T COG2873 187 ATPYL-CRPIEH---G---ADIVVHSATKYIGGHGTAIGGVIVDGGK-FDWTANGRFPEFTTPDPS---YHGLVY--TE- 252 (426)
T ss_pred Cccee-cchhhc---C---CCEEEEeecccccCCccccceEEEeCCc-cccccCCCCcccCCCCcc---ccceeh--hh-
Confidence 87644 433332 3 599999999999864 456667764432 2110 0011111111000 000011 00
Q ss_pred hcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC-
Q psy3048 201 LGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC- 279 (367)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~- 279 (367)
..+.+.+.+.+.... +++..... .++..| +-..|.|-+.-+++|+.+++..+.+.|+++|.+.-+.
T Consensus 253 ---~~g~~af~~~~r~~~----lRDlGa~l----sPfnAf--l~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~Y 319 (426)
T COG2873 253 ---TFGNAAFIIKARVQL----LRDLGATL----SPFNAF--LLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNY 319 (426)
T ss_pred ---hcccHHHHHHHHHHH----HHhccccc----CcHHHH--HHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeec
Confidence 000111111111100 02222222 223333 3344778888899999999999999999999775432
Q ss_pred C-----C------------CceeEEEEEcCCchHHHHHHHHHh---------ccCcEEEEE--eEEC------------C
Q psy3048 280 P-----P------------SMGLVCFRLKGDNDLTNQLYERLM---------SHKQIYIIK--ASFQ------------G 319 (367)
Q Consensus 280 ~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~---------~~g~~~~~~--~~~~------------~ 319 (367)
| | ...+++|.+++..+..+++.+.|. +...+.++| +.+. .
T Consensus 320 pgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~ 399 (426)
T COG2873 320 PGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVT 399 (426)
T ss_pred CCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCC
Confidence 2 1 246889999875454556666543 122333433 2221 3
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+..+|+|+. -||++.+++.|++.++.
T Consensus 400 ~~~IRlSVG-----IEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 400 PDLIRLSVG-----IEDIDDIIADLEQALEA 425 (426)
T ss_pred CCcEEEEec-----cCCHHHHHHHHHHHHhc
Confidence 678999874 47899999999998764
No 158
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.67 E-value=1e-14 Score=140.59 Aligned_cols=243 Identities=18% Similarity=0.189 Sum_probs=158.4
Q ss_pred EEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+... .+...|+++++++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 102 ~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~t------klV~ie~p~NptG~v~dl~~I~~ 170 (390)
T PRK08133 102 HVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-----DLDAWRAAVRPNT------KLFFLETPSNPLTELADIAALAE 170 (390)
T ss_pred EEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCC------eEEEEECCCCCCCCcCCHHHHHH
Confidence 56667778876543 445689999999874 8899999997765 48888899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||+||+++++|++++.+.+..+ . .. .+|+++.+++|+++++. ..|++++.+.+.+.+.. .++...
T Consensus 171 la~~~gi~livD~t~~~~~~~~p-l---~~---g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~~-- 237 (390)
T PRK08133 171 IAHAAGALLVVDNCFCTPALQQP-L---KL---GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRTA-- 237 (390)
T ss_pred HHHHcCCEEEEECCCcccccCCc-h---hh---CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHHh--
Confidence 99999999999999876543221 1 11 34999999999998653 24444443433332211 001000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+.....+..|..++ +.+.+..++++..+++.++.
T Consensus 238 --------------------------------------------g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la 271 (390)
T PRK08133 238 --------------------------------------------GPTLSPFNAWVFLK--GLETLSLRMEAHSANALALA 271 (390)
T ss_pred --------------------------------------------CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHH
Confidence 00011233343333 45567888888999999999
Q ss_pred HHhcCCCCeEEe-CCC----------------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE-
Q psy3048 267 DLVEKDDRFELV-CPP----------------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF- 317 (367)
Q Consensus 267 ~~L~~~~g~~~~-~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~- 317 (367)
+.|+++|++.-+ .|. ..++++|.+.+..+...++.+.|.-- + .....|. .+
T Consensus 272 ~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~ 351 (390)
T PRK08133 272 EWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHG 351 (390)
T ss_pred HHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcc
Confidence 999999988643 331 24689999965333344666654321 1 0011110 00
Q ss_pred ---------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 ---------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ---------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
. .++.+|+|+. -||++.+++.|++.++
T Consensus 352 ~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~ 389 (390)
T PRK08133 352 RLSPEARAAAGITEGLIRVAVG-----LEDVADIKADLARGLA 389 (390)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHHhh
Confidence 0 1468999774 3678889999988764
No 159
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.7e-14 Score=138.71 Aligned_cols=248 Identities=16% Similarity=0.115 Sum_probs=161.3
Q ss_pred eEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+..... ...|++++.++ ..|++++++++++.+ .+|.+++++|++|.+.|+++|.
T Consensus 92 D~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~~d~e~l~~~l~~~t------klV~l~sP~NPtG~v~di~~I~ 160 (386)
T PRK08045 92 DLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-----QGDEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKIC 160 (386)
T ss_pred CEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----CCCHHHHHHhcccCC------eEEEEECCCCCCCEecCHHHHH
Confidence 35666777877644332 22455666664 258999999987655 4888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|+++|+++++|++|+.+....+ .. . .+|+++.+.+||++++.+ .|+++.++++...+.. ....++.
T Consensus 161 ~ia~~~g~~vivDeay~~~~~~~p-l~---~---gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~-~~~~~~g-- 230 (386)
T PRK08045 161 HLAREAGAVSVVDNTFLSPALQNP-LA---L---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELA-WWANNIG-- 230 (386)
T ss_pred HHHHHcCCEEEEECCCCccccCCc-hh---h---CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHH-HHHHhcC--
Confidence 999999999999999976544221 11 1 359999999999998876 5666554444332210 0000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
....++..|..++ +.+-+..++++..+++..
T Consensus 231 -----------------------------------------------~~~~p~~~~l~~r--gl~tl~~R~~~~~~na~~ 261 (386)
T PRK08045 231 -----------------------------------------------VTGGAFDSYLLLR--GLRTLVPRMELAQRNAQA 261 (386)
T ss_pred -----------------------------------------------CCCCHHHHHHHHh--hhccHHHHHHHHHHHHHH
Confidence 0011234444444 445688889999999999
Q ss_pred HHHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--E
Q psy3048 265 FADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--S 316 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--~ 316 (367)
+.+.|+++|.++ +..| | ..++++|.+++......++.+.|.--. .....|. .
T Consensus 262 la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~ 341 (386)
T PRK08045 262 IVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMT 341 (386)
T ss_pred HHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCceeEeCCCCcc
Confidence 999999999875 4443 1 236889998753233346666654211 0011111 0
Q ss_pred E----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 317 F----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 317 ~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+ . .++.+|+|+. -||.+.+++.|++.++.+.+
T Consensus 342 ~~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 342 HAGMAPEARAAAGISETLLRISTG-----IEDGEDLIADLENGFRAANK 385 (386)
T ss_pred cccCCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHHHHHhhc
Confidence 0 1 1468999874 36889999999998887654
No 160
>PRK07550 hypothetical protein; Provisional
Probab=99.67 E-value=1.5e-14 Score=139.56 Aligned_cols=259 Identities=11% Similarity=0.021 Sum_probs=161.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++..+......++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+-+ +++
T Consensus 114 gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~P~NPtG~~~~~~~~~~ 187 (386)
T PRK07550 114 GDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRT------RAIALVTPNNPTGVVYPPELLHE 187 (386)
T ss_pred CCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccC------cEEEEeCCCCCCCcccCHHHHHH
Confidence 34577788888888888888999999999863 56789999999997654 36677789999999855 889
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhC--CCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR--GLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+............ +...-.+...+.+|.++ ...++|+++..+ ..+.... .+.
T Consensus 188 i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~~~----~~~ 262 (386)
T PRK07550 188 LYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP-ARIAEIE----KFM 262 (386)
T ss_pred HHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH-HHHHHHH----HHH
Confidence 999999999999999999754321110000001 11111355778999987 345688888743 2222211 011
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
..... +...+....+..++.. ..+..++..++..+.
T Consensus 263 ~~~~~-------------------------------------------~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~ 298 (386)
T PRK07550 263 DTVAI-------------------------------------------CAPRIGQIAVAWGLPN-LADWRAGNRAEIARR 298 (386)
T ss_pred hhccc-------------------------------------------CCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHH
Confidence 00000 0000111122222221 123445555667778
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edi 337 (367)
.+++.+.|++++++.+. ++....++++++.....+.++.++|.+ .| +.+.++. + .+..++|+++.. .+++++
T Consensus 299 ~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~l~~~~g-v~v~pg~~f~~~~~~~iRis~~~--~~~~~~ 374 (386)
T PRK07550 299 RDAFRAVFARLPGWELL-ASGAYFAYVRHPFPDRPSREVARRLAKEAG-ILCLPGTMFGPGQEGYLRLAFAN--ADVAGI 374 (386)
T ss_pred HHHHHHHHHhCCCceeC-CCceEEEEecCCCCCCCHHHHHHHHHHhcC-EEEeCchhhCCCCCCEEEEEeec--CCHHHH
Confidence 88888999887676543 344445555554312336788888764 56 4454432 2 235699998743 468999
Q ss_pred HHHHHHHHHH
Q psy3048 338 AFAWNEISHQ 347 (367)
Q Consensus 338 d~li~~l~~~ 347 (367)
+.+++.|.++
T Consensus 375 ~~~~~~l~~~ 384 (386)
T PRK07550 375 GELVERLRAF 384 (386)
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 161
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.66 E-value=7.4e-15 Score=140.59 Aligned_cols=243 Identities=18% Similarity=0.208 Sum_probs=157.0
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..+.+. ...+...|++++.++.. |++++++++++.+ .+|.+++++|++|.+.|+++|++
T Consensus 92 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~t------klv~le~P~NP~~~~~dl~~I~~ 160 (366)
T PRK08247 92 ELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA-----SLKAIEQAITPNT------KAIFIETPTNPLMQETDIAAIAK 160 (366)
T ss_pred EEEEecCCcCcHHHHHHHHhhccCceEEEECCC-----CHHHHHHhcccCc------eEEEEECCCCCCCcHHHHHHHHH
Confidence 355556666553 33445689999988753 8999999997765 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|++||+++++|++++...+..+ .. ..+|+++.+.+|++.++.+ .|+++.+++........ ...+..
T Consensus 161 la~~~g~~lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~-~~~~~g--- 229 (366)
T PRK08247 161 IAKKHGLLLIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY-YQNAAG--- 229 (366)
T ss_pred HHHHcCCEEEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH-HHHhcC---
Confidence 99999999999999965443221 11 1359999999999997755 45555543333322110 000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.....+..+..++ +.+.+..++++..++++.+
T Consensus 230 ----------------------------------------------~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l 261 (366)
T PRK08247 230 ----------------------------------------------AVLSPFDSWLLIR--GMKTLALRMRQHEENAKAI 261 (366)
T ss_pred ----------------------------------------------CCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHH
Confidence 0011123333333 3445667778889999999
Q ss_pred HHHhcCCCCeEEe-CCCCceeEEEEEcCCchHHHHHHHHHhc--cC-------cEEEEEeEE------------C--Cee
Q psy3048 266 ADLVEKDDRFELV-CPPSMGLVCFRLKGDNDLTNQLYERLMS--HK-------QIYIIKASF------------Q--GRP 321 (367)
Q Consensus 266 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~l~~~L~~--~g-------~~~~~~~~~------------~--~~~ 321 (367)
.+.|+++|++..+ .|+..++++|.+.+ .....++.+.|.. .+ .+.+.|... . +.+
T Consensus 262 ~~~L~~~p~v~~v~~P~~gg~~sf~~~~-~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~ 340 (366)
T PRK08247 262 AAFLNEQPGVTDVLYPGRGGMLSFRLQD-EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNR 340 (366)
T ss_pred HHHHHhCCCeeEEecCCcCcEEEEEECC-HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCC
Confidence 9999999998754 45577888998754 2233445554331 01 111222110 0 145
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.+|+|+. -||++.+++.|++.+++
T Consensus 341 ~~R~svG-----lE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 341 LLRFSVG-----IENVEDLIADLKQAFKQ 364 (366)
T ss_pred eEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 8999764 36889999999988764
No 162
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.66 E-value=7.3e-15 Score=141.02 Aligned_cols=245 Identities=15% Similarity=0.175 Sum_probs=158.2
Q ss_pred eEEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+.. ..+...|+++++++.. |++++++++++++ .+|.+.+++|++|.+.|+++|+
T Consensus 89 d~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~-----d~e~l~~ai~~~t------~lV~lesP~Nptg~~~di~~I~ 157 (380)
T PRK06176 89 DHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS-----DLSQIKKAIKPNT------KALYLETPSNPLLKITDLAQCA 157 (380)
T ss_pred CEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC-----CHHHHHHhcCcCc------eEEEEECCCCCCceecCHHHHH
Confidence 34555666665543 3345578888888753 8999999987765 4888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||++|+++++|++++.+....+ . . ..+|+++++++|++.+|.+ .|+++.++.....+.. .+...
T Consensus 158 ~la~~~gi~vivD~t~a~~~~~~p-~-----~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~-----~~~~~ 225 (380)
T PRK06176 158 SVAKDHGLLTIVDNTFATPYYQNP-L-----L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA-----FFQNA 225 (380)
T ss_pred HHHHHcCCEEEEECCccccccCCc-c-----c-cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH-----HHHHH
Confidence 999999999999999986533211 1 1 1459999999999998764 5556654444332210 00000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.+........|.. ..+.+.+..++++..+.+..
T Consensus 226 ---------------------------------------------~G~~~~~~~~~l~--~~gl~tl~~R~~~~~~~a~~ 258 (380)
T PRK06176 226 ---------------------------------------------IGGVLGPQDSWLL--QRGIKTLGLRMEAHQKNALC 258 (380)
T ss_pred ---------------------------------------------hcCCCCHHHHHHH--HhccCcHHHHHHHHHHHHHH
Confidence 0000011222322 23556667788888899999
Q ss_pred HHHHhcCCCCeEE-eCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEeE--
Q psy3048 265 FADLVEKDDRFEL-VCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKAS-- 316 (367)
Q Consensus 265 l~~~L~~~~g~~~-~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~~-- 316 (367)
+.+.|+++|.+.- ..| | ..++++|.+.+ .+...++++.|.--. .....|..
T Consensus 259 la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~ 337 (380)
T PRK06176 259 VAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVAFVESLKLFILGESLGGVESLVGIPAFMT 337 (380)
T ss_pred HHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHHHHHcCCcceEccCCCCCCceeeCCcccc
Confidence 9999999988753 333 1 23688999865 334456666554211 01111111
Q ss_pred E----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 F----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 ~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+ . ..+.+|+|+. -||++.+++.|++.++++
T Consensus 338 ~~~~~~~~~~~~gi~~~liR~svG-----lE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 338 HACIPKEQREAAGIRDGLVRLSVG-----IEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cccCCHHHHHhcCCCcCeEEEEec-----cCCHHHHHHHHHHHHhhc
Confidence 0 1 1468999774 368999999999987753
No 163
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=3.5e-14 Score=135.35 Aligned_cols=246 Identities=13% Similarity=0.042 Sum_probs=160.9
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
.|++++.+|..+...++..|++++.++.++++.+|+++|++ .+ .++++++++|+||.+.|.+++.++++.
T Consensus 103 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~ 172 (353)
T PRK05387 103 PLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAA 172 (353)
T ss_pred EEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 46667778877777788899999999998788999999873 22 367889999999999999999999987
Q ss_pred c-CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 112 Y-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 112 ~-gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
+ |+++++|++|+.+.. .......... .-.+++.+..|.++.| ..+|+++.. ++.+.........+
T Consensus 173 ~~~~~livDe~y~~~~~--~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~~~l~~~~~~~--------- 239 (353)
T PRK05387 173 NPDSVVVIDEAYVDFGG--ESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIGH-PELIEALNRVKNSF--------- 239 (353)
T ss_pred CCCcEEEEeCcccccCC--cchHHHHhhC-CCEEEEEehhHhhcchhhhceeeecC-HHHHHHHHHhhccC---------
Confidence 5 999999999854211 1111111111 1257888899998744 568888763 33332211000000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHH
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l~~~ 268 (367)
..+ + ...+...++...+. .+.+++..++..+..+++.+.
T Consensus 240 ---~~~-------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 279 (353)
T PRK05387 240 ---NSY-------------------------------P------LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEE 279 (353)
T ss_pred ---CCC-------------------------------C------cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00112222222222 344667777888889999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
|+++ |+++. ++..+.+++.+++ ....++.+.|.++|+. +.+.. ....+++|+++. +.+++++++++|+++
T Consensus 280 L~~~-g~~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~-v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~ 350 (353)
T PRK05387 280 LEAL-GFEVL-PSKANFVFARHPS--HDAAELAAKLRERGII-VRHFNKPRIDQFLRITIG----TDEEMEALVDALKEI 350 (353)
T ss_pred HHHC-CCeEC-CCcCcEEEEECCC--CCHHHHHHHHHHCCEE-EEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHH
Confidence 9887 77754 4555666666543 2357888999888854 43221 123569999764 579999999999987
Q ss_pred HH
Q psy3048 348 SS 349 (367)
Q Consensus 348 ~~ 349 (367)
+.
T Consensus 351 ~~ 352 (353)
T PRK05387 351 LA 352 (353)
T ss_pred hh
Confidence 54
No 164
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.9e-14 Score=138.57 Aligned_cols=248 Identities=11% Similarity=0.006 Sum_probs=163.1
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHH-HHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAV-KEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l-~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
-.|++++.++..+...++..|++++.++.++++.+|+++|++++ .+.+ .+|++++++|+||.+.|.+++.+++
T Consensus 128 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~------~~v~l~~P~NPTG~~~~~~~l~~l~ 201 (380)
T PLN03026 128 DKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKP------KLLFLTSPNNPDGSIISDDDLLKIL 201 (380)
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCC------cEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 35666677777777778889999999998777899999999998 3443 4888889999999999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+.. +++++|++|.-+....... ..+... .-.++..+..|.++ .+..+|+++.. ++.+........+
T Consensus 202 ~~~-~~vi~DeaY~~~~~~~~~~-~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~~~--------- 268 (380)
T PLN03026 202 ELP-ILVVLDEAYIEFSTQESRM-KWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------- 268 (380)
T ss_pred hcC-CEEEEECcchhhcCCcchH-HHHHhC-CCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhcCC---------
Confidence 865 9999999996543211111 111111 12466788899986 44667777753 3333221110000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l~~ 267 (367)
| . ...+...++...+. .+-+++..++..+..+++.+
T Consensus 269 ------~-------------------------------~------~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~ 305 (380)
T PLN03026 269 ------Y-------------------------------N------VSVAAEVAACAALSNPKYLEDVKNALVEERERLFG 305 (380)
T ss_pred ------C-------------------------------C------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00122222222221 23456667777888889999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
.|++++++.+ .++..+.+.++++. .....++.+.|.++|+. +.+. ...+.+++||++. +.+|+++++++|++
T Consensus 306 ~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~l~~~gI~-v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~ 378 (380)
T PLN03026 306 LLKEVPFLEP-YPSDANFILCRVTS-GRDAKKLKEDLAKMGVM-VRHYNSKELKGYIRVSVG----KPEHTDALMEALKQ 378 (380)
T ss_pred HHHHCCCCeE-CCCCCeEEEEECCC-CCCHHHHHHHHHHCCeE-EEECCCCCCCCEEEEecC----CHHHHHHHHHHHHH
Confidence 9998855554 45667777777653 22356888889888854 4332 2233569999764 57899999999976
Q ss_pred H
Q psy3048 347 Q 347 (367)
Q Consensus 347 ~ 347 (367)
+
T Consensus 379 ~ 379 (380)
T PLN03026 379 L 379 (380)
T ss_pred h
Confidence 4
No 165
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.66 E-value=2.6e-14 Score=138.44 Aligned_cols=260 Identities=12% Similarity=0.069 Sum_probs=162.5
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC-CC-CC-cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD-DN-GV-LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~-~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
.|++++..+......++..|++++.++.+ ++ +. .++++|++++++.+ .+|++++++|++|.+. ++++|
T Consensus 114 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 114 EILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred EEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCccCCHHHHHHH
Confidence 45556666666666677889999999985 23 33 36799999886654 4788889999999985 58899
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+++|+++|+++++|++|+.+.+........ +.+...--+++.+.+|.++. ...+|+++..+++.+..........
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~-- 265 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQAR-- 265 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhcc--
Confidence 999999999999999998654322111111 11111112566778999874 4678888775444333211000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
+ . ...+....+..+++. +...+++..++..+..
T Consensus 266 ------------~-------------------------------~---~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 266 ------------L-------------------------------S---PPTLEQIGAAALLDT-PESYFDEVREEYKKRR 298 (397)
T ss_pred ------------C-------------------------------C---CCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHH
Confidence 0 0 000111222222322 3445677777788888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc------cCcEEEEEe-EE---C--CeeEEEEEecCC
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS------HKQIYIIKA-SF---Q--GRPFLRFVVTSP 330 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~------~g~~~~~~~-~~---~--~~~~lRi~~~~~ 330 (367)
+.+.+.|++++++.+..|.....++++++.. ...++.+.|.+ .|+. +.++ .+ . +..++|++++
T Consensus 299 ~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~-v~pg~~f~~~~~~~~~~iRls~~-- 373 (397)
T PRK07568 299 DILYEELNKIPGVVCEKPKGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVM-VAPASGFYATPGLGKNEIRIAYV-- 373 (397)
T ss_pred HHHHHHHhcCCCceecCCCcceEEEEecCCC--CHHHHHHHHHhhcccccceEE-EeCchHhcCCCCCCCCeEEEEEe--
Confidence 9999999888777655444333455666532 34577777765 3543 4433 22 1 2469999874
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~ 352 (367)
.++++++.+++.|.+++++..
T Consensus 374 -~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 374 -LNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred -CCHHHHHHHHHHHHHHHHHhh
Confidence 257999999999999887643
No 166
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.66 E-value=8.7e-15 Score=140.21 Aligned_cols=243 Identities=17% Similarity=0.208 Sum_probs=156.8
Q ss_pred EEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..+.+.... ....|++++.++.+ +.+++++++++.+ .+|++++++|++|.+.|+++|++
T Consensus 91 ~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-----~~e~l~~~i~~~t------klV~lesp~Np~g~~~dl~~I~~ 159 (377)
T TIGR01324 91 HVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-----IGEDIATLIQPNT------KVLFLEAPSSITFEIQDIPAIAK 159 (377)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCCc------eEEEEECCCCCCCcHHHHHHHHH
Confidence 455566677665543 23468888877643 2378888887765 48999999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|+++++|++|+.+.+.-+ . .. .+|+++.+.+||++++.+ .|+++. +++...+... ..+..+
T Consensus 160 la~~~g~~livD~t~a~g~~~~p-l---~~---gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~~l~~--~~~~~G-- 227 (377)
T TIGR01324 160 AARNPGIVIMIDNTWAAGLLFKP-L---EH---GVDISIQAGTKYLVGHSDIMIGTVVA-NARTWDQLRE--HSYLMG-- 227 (377)
T ss_pred HHHHcCCEEEEECCCccccccCc-c---cc---CceEEEecCceeccCCCCceEEEEEe-CHHHHHHHHH--HHHHhC--
Confidence 99999999999999987655321 1 12 359999999999998865 344444 4433332210 011100
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
....+...|..++ +.+-+..+++++.+.+..+
T Consensus 228 ----------------------------------------------~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~l 259 (377)
T TIGR01324 228 ----------------------------------------------QMVDADDAYTTLR--GLRTLGVRLKQHQESSLAI 259 (377)
T ss_pred ----------------------------------------------CCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHH
Confidence 0011233444443 4455667788899999999
Q ss_pred HHHhcCCCCe-EEeCC-----C-----------CceeEEEEEcC-CchHHHHHHHHHhccCc---------EEE--EEe-
Q psy3048 266 ADLVEKDDRF-ELVCP-----P-----------SMGLVCFRLKG-DNDLTNQLYERLMSHKQ---------IYI--IKA- 315 (367)
Q Consensus 266 ~~~L~~~~g~-~~~~~-----~-----------~~~~v~f~~~~-~~~~~~~l~~~L~~~g~---------~~~--~~~- 315 (367)
.+.|+++|.+ ++..| | ..++++|++++ ..+...++.+.|...+. +.. .+.
T Consensus 260 a~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~ 339 (377)
T TIGR01324 260 AKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPEL 339 (377)
T ss_pred HHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCC
Confidence 9999999877 44443 1 25788999964 23334567776653321 111 000
Q ss_pred EE-------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 316 SF-------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 316 ~~-------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.+ -..+.+|+|+. -||.+.+++.|++.++.
T Consensus 340 ~~~~~~~~~~~~~liR~svG-----lE~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 340 GHRPNIKRNLEGPLIRVHIG-----LENVDDLKADLKAGFEA 376 (377)
T ss_pred CHHHHHhccCCCCEEEEEeC-----CCCHHHHHHHHHHHHhc
Confidence 00 01258999774 36788888888888763
No 167
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=8.5e-15 Score=140.48 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=158.5
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.++...+ ...|+++++++.+ +.+.+++++++++ .+|++++++|++|.+.|+++|++
T Consensus 102 ~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~~~T------klV~lespsNPtg~v~dl~~I~~ 170 (394)
T PRK09028 102 HLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIRPNT------KVLFLESPGSITMEVQDVPTLSR 170 (394)
T ss_pred EEEEECCCcHHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHH
Confidence 4555666776765533 3468888887653 5688998887766 48999999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|++++||++|+.+.. ..+.+ . .+|+++.++|||++++.+ .|+ ++.++....+... ...++
T Consensus 171 la~~~g~~lvvD~t~a~p~~-~~Pl~---~---GaDivv~S~tK~l~Gh~d~~~G~-~~~~~~~~~~l~~-~~~~~---- 237 (394)
T PRK09028 171 IAHEHDIVVMLDNTWASPIN-SRPFE---M---GVDISIQAATKYIVGHSDVMLGT-ATANEKHWDQLRE-HSYLM---- 237 (394)
T ss_pred HHHHcCCEEEEECCcccccc-CCccc---c---CceEEEEeCCeEecCCCCEEEEE-EECCHHHHHHHHH-HHHhc----
Confidence 99999999999999987543 22211 1 359999999999998843 233 3434332221100 00000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+....+...|.. ..|.+-+.-+++++.+.+..+
T Consensus 238 ---------------------------------------------G~~~~p~~a~l~--~rgl~TL~lR~~~~~~na~~l 270 (394)
T PRK09028 238 ---------------------------------------------GQCTSPDDVYLA--MRGLRTLGVRLAQHEKNALKV 270 (394)
T ss_pred ---------------------------------------------CCCCCHHHHHHH--HcccCcHHHHHHHHHHHHHHH
Confidence 011123444433 346677888999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcC-CchHHHHHHHHHhccC---------cEEEEEeE--
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKG-DNDLTNQLYERLMSHK---------QIYIIKAS-- 316 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~-~~~~~~~l~~~L~~~g---------~~~~~~~~-- 316 (367)
.+.|+++|.++ +..| | ..++++|.+++ ..+...++.+.|.--. .....|..
T Consensus 271 a~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~ 350 (394)
T PRK09028 271 ANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILGVFGIN 350 (394)
T ss_pred HHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcceeECCCCcC
Confidence 99999999874 4444 1 24699999963 2233446666553111 00111100
Q ss_pred ---E-----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 317 ---F-----QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 317 ---~-----~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. ...+.+|+|+. -||.+.+++.|++.++..+
T Consensus 351 ~~~~~~~~~~~~~liR~svG-----lEd~~dLi~Dl~~Al~~~~ 389 (394)
T PRK09028 351 KLRTATNWDFSKPLIRLHIG-----LEDVDDLIADLEAGFERYN 389 (394)
T ss_pred ccCchhhhcCCCCeEEEEeC-----cCCHHHHHHHHHHHHHHHH
Confidence 0 01258999874 3578888888888877543
No 168
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.66 E-value=1.3e-14 Score=141.56 Aligned_cols=288 Identities=11% Similarity=0.074 Sum_probs=175.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...++...|++++.++++ +++.+|++++++++.+.+ .+|++++ ++|...|+++|.++
T Consensus 111 Gd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~t------kaVi~~~---~~G~p~dl~~I~~l 181 (438)
T PRK15407 111 GDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKT------KAIMIAH---TLGNPFDLAAVKAF 181 (438)
T ss_pred CCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCC------eEEEEeC---CCCChhhHHHHHHH
Confidence 4457778899999999999999999999986 578999999999987655 3666665 36888899999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC---
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD--- 185 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~--- 185 (367)
|++||+++++|+||+.+....+..- ..++.+-++++...|.+.+..| |++++++++........ ..+ +...
T Consensus 182 a~~~gi~vIeDaa~a~G~~~~g~~~---G~~gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~-~~~-G~~~~~~ 255 (438)
T PRK15407 182 CDKHNLWLIEDNCDALGSTYDGRMT---GTFGDIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESF-RDW-GRDCWCA 255 (438)
T ss_pred HHHCCCEEEEECccchhhhcCCeee---eccCceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHH-HHh-Ccccccc
Confidence 9999999999999988765433211 1123334556666677776554 88888776544332100 000 0000
Q ss_pred CCCCCC-CCCchhhhhhcccCCCcchhccCCCCCCCCccccc-cccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQ-SPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHW-QTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 186 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
...... ...+ .|. ....|..+ . ..+ ....|-++++-.+.+++...+.+.++++.++.+++++
T Consensus 256 ~~~~~~~~~~~---~~~--~~~~~~~~-~----------~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~ 319 (438)
T PRK15407 256 PGCDNTCGKRF---GWQ--LGELPFGY-D----------HKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFA 319 (438)
T ss_pred ccccccccccc---ccc--cccccccc-c----------ccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0000 000 00000000 0 000 0112334455667777777778889999999999999
Q ss_pred HHHHHhcCCCCeE-EeC-CCCc----eeEEEEEcCC-chHHHHHHHHHhccCcEE----EEEeEE-----------CC--
Q psy3048 264 KFADLVEKDDRFE-LVC-PPSM----GLVCFRLKGD-NDLTNQLYERLMSHKQIY----IIKASF-----------QG-- 319 (367)
Q Consensus 264 ~l~~~L~~~~g~~-~~~-~~~~----~~v~f~~~~~-~~~~~~l~~~L~~~g~~~----~~~~~~-----------~~-- 319 (367)
++.+.|+.+++.. +.. ++.. ....+.+... ....+++.+.|.++|+-. ..+... ..
T Consensus 320 ~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~ 399 (438)
T PRK15407 320 YLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGEL 399 (438)
T ss_pred HHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCC
Confidence 9999999887532 222 2221 1223334321 112468888998888521 101000 00
Q ss_pred -------eeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 320 -------RPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 320 -------~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
...+-+ +.++..+++|+++++++|+++++
T Consensus 400 P~ae~~~~~~l~L-P~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 400 TNTDRIMNDTFWI-GVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hHHHHHHhCeEEe-cCCCCCCHHHHHHHHHHHHHHHh
Confidence 112333 35667789999999999999864
No 169
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.6e-14 Score=137.88 Aligned_cols=248 Identities=12% Similarity=0.053 Sum_probs=164.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.++..+...++..|++++.++.++++.+|+++|++++.+.. +.+|++++++|+||.+.+.+++.+++
T Consensus 105 gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~ 179 (356)
T PRK04870 105 GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGNLFDDADVERII 179 (356)
T ss_pred CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 3456777889999999999999999999998788999999999986422 24777889999999999988888888
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
+..++++++|++|..+.. +.....+....+ .++..+..|++..+..+|+++.. +..+.........
T Consensus 180 ~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~-~~~i~~~~~~~~~---------- 245 (356)
T PRK04870 180 EAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGH-PAWIAELDKVRPP---------- 245 (356)
T ss_pred HHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCC-HHHHHHHHHccCC----------
Confidence 776899999999865322 111111111111 46777789954333458887763 2333221110000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
|.. ..+.......+++. .+.+++..++..+.++++.+.|
T Consensus 246 ------------------------------------~~~---~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L 284 (356)
T PRK04870 246 ------------------------------------YNV---NVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAAL 284 (356)
T ss_pred ------------------------------------CcC---CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00111112222221 2346777778888999999999
Q ss_pred cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EE--CCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 270 EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SF--QGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 270 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~--~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
++++|+.+. ++..+.++++++. ..++.+.|.++|+. +.+. .+ ...+++|+++. +.+++++|+++|++
T Consensus 285 ~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~l~~~gI~-v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~ 354 (356)
T PRK04870 285 AALPGVTVF-PSAANFILVRVPD----AAAVFDGLKTRGVL-VKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKA 354 (356)
T ss_pred HhCCCcEEC-CCCCeEEEEECCC----HHHHHHHHHHCCEE-EEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHH
Confidence 988888754 5556677776642 46788888888854 4433 22 23569999764 58999999999987
Q ss_pred H
Q psy3048 347 Q 347 (367)
Q Consensus 347 ~ 347 (367)
+
T Consensus 355 ~ 355 (356)
T PRK04870 355 A 355 (356)
T ss_pred h
Confidence 5
No 170
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=9.8e-15 Score=139.27 Aligned_cols=244 Identities=10% Similarity=0.009 Sum_probs=155.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++.+..+..+...++..|++++.++.++++.+|++.+++ + +.+ .+|++++++|+||.+.|.+++.++++
T Consensus 103 d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~-~~~------~li~i~nP~NPTG~~~~~~~l~~l~~ 174 (354)
T PRK04635 103 DSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L-DGA------KLVFICNPNNPTGTVIDRADIEQLIE 174 (354)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c-cCC------CEEEEeCCCCCCCccCCHHHHHHHHH
Confidence 456667788888888888899999999998778899998873 3 333 47888999999999999999999988
Q ss_pred h-cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 E-YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~-~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
. .++++++|++|.-+.... ..........+ -++..+.+|+++ .+..+|+++.. ++.+........+
T Consensus 175 ~~~~~~vivDeay~~~~~~~-s~~~~~~~~~~-~iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~--------- 242 (354)
T PRK04635 175 MTPDAIVVVDEAYIEFCPEY-SVADLLASYPN-LVVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAP--------- 242 (354)
T ss_pred hCCCcEEEEeCchHhhccCc-chHHHHhhCCC-EEEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCC---------
Confidence 6 379999999986543111 10000111111 245677899986 44567888764 3333221100000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG---LKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~g~~~~~~~~~~la~~l 265 (367)
| .. ......+++..+. .+.+++..++..+.++++
T Consensus 243 ------~-------------------------------~~------~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 279 (354)
T PRK04635 243 ------Y-------------------------------PV------PLPVSEIATQALSEAGLARMKFQVLDLNAQGARL 279 (354)
T ss_pred ------C-------------------------------CC------CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 0 00 0011122222222 233455555667777889
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
.+.|++++++++. ++..+.+.++++. ..++.+.|.++|+. +.... ....+++|+++. +++|+++++++|
T Consensus 280 ~~~L~~~~~~~~~-~~~g~f~~~~~~~----~~~~~~~l~~~gv~-v~~~~~~~~~~~lRis~~----~~e~~~~l~~al 349 (354)
T PRK04635 280 QAALSMYGGAKVL-EGNGNYVLAKFDD----VDAVFKALWDAGIV-ARAYKDPRLANCIRFSFS----NRAETDKLIGLI 349 (354)
T ss_pred HHHHHhCCCceEC-CCCCcEEEEECCC----HHHHHHHHHHCCEE-EEECCCCCCCCeEEEEeC----CHHHHHHHHHHH
Confidence 9999988767765 4444555555542 45777788878743 33221 223568999753 689999999999
Q ss_pred HHH
Q psy3048 345 SHQ 347 (367)
Q Consensus 345 ~~~ 347 (367)
++.
T Consensus 350 ~~~ 352 (354)
T PRK04635 350 RNQ 352 (354)
T ss_pred HHh
Confidence 763
No 171
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.66 E-value=7e-15 Score=139.86 Aligned_cols=250 Identities=13% Similarity=0.025 Sum_probs=162.3
Q ss_pred HHHHhCCc-ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccc
Q psy3048 45 KSAIIGDV-PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 45 ~~~~~~g~-~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
+.++..|+ +++.+..+.+..+++++++. . + -|+++|+.|+||+.+|+++|++.+ +++.++||+..+
T Consensus 99 eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs 165 (374)
T TIGR01365 99 DVTKQLKLPDVRVLEAEYGKLPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSA 165 (374)
T ss_pred HHHHhcCCCCcEEEcCCCCCCCCHHHcCC----C-C------CEEEecCCCchheecccccccccc--CCCcEEEEccch
Confidence 67777899 58888877778899999983 1 1 256999999999999998777433 589999999877
Q ss_pred cccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCc-----cccccCCCCCCCCCCCchhh
Q psy3048 124 GSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDR-----VYLKHTDAPMNTQSPDYTVM 198 (367)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~-----~yl~~~~~~~~~~~~~~~~~ 198 (367)
.+..+.+- . .+|++..+++|+|++|+|++++.++++. +++.-...+ .|+.... ...|
T Consensus 166 ~g~~~l~~-----d---~iDv~~tgsQK~L~~ppGls~v~vs~~A-l~~~~~~~~y~~~~~~~~~~~------~~~~--- 227 (374)
T TIGR01365 166 AFAQDLDY-----H---KLDVVTFSWQKVLGGEGAHGMLILSPRA-VARLESYTPAWPLPKIFRLTK------GGKL--- 227 (374)
T ss_pred hcCCCCCh-----h---HCcEEEEechhccCCCCceEEEEECHHH-HHHHhhcCCCCCChhhhcccc------ccch---
Confidence 66654432 1 2499999999999999999999997654 332211111 1111000 0000
Q ss_pred hhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy3048 199 NWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEKDDRFE 276 (367)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L~~~~g~~ 276 (367)
| .+ + ...++..++. +....+..+++.+..+ |++++.+|+.++++.+++.+++++.++
T Consensus 228 -~-~~--------~-----------~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~ 286 (374)
T TIGR01365 228 -N-KK--------I-----------FEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIH 286 (374)
T ss_pred -h-hh--------h-----------hcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 0 00 0 0000111111 1123333445555565 899999999999999999999984377
Q ss_pred EeCC-C--Cc-eeEEEEEcCCch-----H-----HHHHHHHHhccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHHHH
Q psy3048 277 LVCP-P--SM-GLVCFRLKGDND-----L-----TNQLYERLMSHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 277 ~~~~-~--~~-~~v~f~~~~~~~-----~-----~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~li 341 (367)
++.+ + .+ .++++++++... . ..++.+.|.++|. .+.++... ....+||. +.+..+.+||+.++
T Consensus 287 ~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~i~~G~~~~~~~~fRIg-~~G~i~~~di~~l~ 364 (374)
T TIGR01365 287 FLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGV-AYDIGSYRDAPSGLRIW-CGATVEKSDLECLC 364 (374)
T ss_pred cCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCE-EEeccccccCCCceEEe-cCCcCCHHHHHHHH
Confidence 7653 2 33 345566643211 2 4678888888874 44433222 23689994 57888999999999
Q ss_pred HHHHHHH
Q psy3048 342 NEISHQS 348 (367)
Q Consensus 342 ~~l~~~~ 348 (367)
+.|.=+-
T Consensus 365 ~~l~~~~ 371 (374)
T TIGR01365 365 PWLDWAF 371 (374)
T ss_pred HHHHHHH
Confidence 9987553
No 172
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=8.6e-15 Score=142.48 Aligned_cols=277 Identities=16% Similarity=0.198 Sum_probs=165.3
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|... ...+...|+++++++.. |++++++++++.+ .+|++++++|++|.+.|+++|++
T Consensus 105 ~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~-----d~e~l~~ai~~~t------klV~l~sp~NPtG~v~di~~I~~ 173 (431)
T PRK08248 105 EIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS-----DPENFEAAITDKT------KALFAETIGNPKGDVLDIEAVAA 173 (431)
T ss_pred EEEEccCchhhHHHHHHHHHHhCCEEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHH
Confidence 455666666543 33455689999999863 8999999997655 47788899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhhhccCCccc--cccC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVY--LKHT 184 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~y--l~~~ 184 (367)
+||++|+++++|++++.+....+ .. .+ +|+++.+.|||+++|. .+|.+++.+....- .....| +...
T Consensus 174 la~~~gi~vIvD~t~a~~~~~~p-l~---~g---aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~---~~~~~~~~~~~~ 243 (431)
T PRK08248 174 IAHEHGIPLIVDNTFASPYLLRP-IE---HG---ADIVVHSATKFIGGHGTSIGGVIVDSGKFDW---KGSGKFPGLTEP 243 (431)
T ss_pred HHHHcCCEEEEeCCCCccccCCh-hH---cC---CCEEEEcCccccCCCCCceEEEEEeCCcccc---ccccccccccCC
Confidence 99999999999999975433222 11 23 5999999999999875 36776664332110 000000 1000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. .... + .|.... +-+.++... ...+....+....++..| +...|.+-+..+++++.+++.+
T Consensus 244 ~~-----~~~~-~-~~~~~~-~~~~~~~~~--------~~~~~~~~G~~l~p~~a~--l~~rgl~tl~~R~~~~~~nA~~ 305 (431)
T PRK08248 244 DP-----SYHG-L-VYTDAV-GEAAYITKA--------RVQLLRDLGAALSPFNSF--LLLQGLETLHLRMERHSENALA 305 (431)
T ss_pred cc-----cccc-c-hhhhhh-chhhHHHHH--------HHHHHHhcCCCCCHHHHH--HHhcCcCcHHHHHHHHHHHHHH
Confidence 00 0000 0 000000 000000000 000011112223334444 3344666778899999999999
Q ss_pred HHHHhcCCCCeE-EeCC-----C------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--
Q psy3048 265 FADLVEKDDRFE-LVCP-----P------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA-- 315 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~-- 315 (367)
+.+.|+++|++. +..| | ..++++|.+.+......++.++|.--. .....|.
T Consensus 306 la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~ 385 (431)
T PRK08248 306 VAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPAST 385 (431)
T ss_pred HHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcC
Confidence 999999999876 4433 1 135889998653333456666654211 0111111
Q ss_pred EE----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 316 SF----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 316 ~~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.+ . .++.+|+|+. -||++.+++.|++.++.++
T Consensus 386 ~h~~~~~~~~~~~gi~~~liRlsvG-----lEd~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 386 THQQLSEEEQLAAGVTPGLVRLSVG-----TEAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhhh
Confidence 00 1 1568999874 3689999999999887654
No 173
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=8e-15 Score=140.69 Aligned_cols=241 Identities=15% Similarity=0.178 Sum_probs=157.2
Q ss_pred EEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+... .+...|+++++++.. |++++++++++++ .+|++++++|++|.+.|+++|.+
T Consensus 90 ~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~t------klV~le~P~NPtg~~~dl~~I~~ 158 (377)
T PRK07671 90 HVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS-----NLEEVEEAIRPNT------KAIYVETPTNPLLKITDIKKIST 158 (377)
T ss_pred EEEECCCccchHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHH
Confidence 45667777765443 334578999888743 8999999998766 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|+++|+++++|++++...... ... . .+|+++.+.+||+++|.+ .|+++++++...++.. ....+.
T Consensus 159 la~~~g~~lvvD~a~~~~~~~~-p~~---~---g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~---- 226 (377)
T PRK07671 159 IAKEKGLLTIVDNTFMTPYWQS-PIS---L---GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST---- 226 (377)
T ss_pred HHHHcCCEEEEECCCCccccCC-hhh---h---CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh----
Confidence 9999999999999997643321 111 1 359999999999998864 4556665544333221 000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+........|..++ +.+-+..++++..+++..+
T Consensus 227 ---------------------------------------------g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~l 259 (377)
T PRK07671 227 ---------------------------------------------GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAI 259 (377)
T ss_pred ---------------------------------------------cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHH
Confidence 00011233343333 3445666888899999999
Q ss_pred HHHhcCCCCeEEe-CCC----------------CceeEEEEEcCCchHHHHHHHHHhc--cC-------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFELV-CPP----------------SMGLVCFRLKGDNDLTNQLYERLMS--HK-------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~~~-~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~--~g-------~~~~~~~--~~ 317 (367)
.+.|+++|++.-+ .|. ..++++|.+ +..+...++.++|.- .+ .....|. .+
T Consensus 260 a~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~ 338 (377)
T PRK07671 260 AEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANKVLERLQYFTLAESLGAVESLISIPSQMTH 338 (377)
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHHHHHhCCcceEccCCCCCCeEeECCCcccc
Confidence 9999999987543 331 236889988 323334566665532 11 0111111 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
. ..+.+|+|+. -||.+.+++.|++.+
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al 376 (377)
T PRK07671 339 ASIPADRRKELGITDGLIRISVG-----IEDGEDLIEDLAQAL 376 (377)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHh
Confidence 0 2468999774 367888888888765
No 174
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=9.3e-15 Score=142.14 Aligned_cols=277 Identities=18% Similarity=0.210 Sum_probs=165.4
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+..... ...|+++++++ +. .|++++++++++.+ .+|++.+++|++|.+.|+++|++
T Consensus 110 ~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~---~d~e~l~~ai~~~t------klV~ie~~sNp~G~v~Dl~~I~~ 179 (436)
T PRK07812 110 HIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP---DDLDAWRAAVRPNT------KAFFAETISNPQIDVLDIPGVAE 179 (436)
T ss_pred EEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC---CCHHHHHHhCCCCC------eEEEEECCCCCCCeecCHHHHHH
Confidence 4556667777765433 33688888885 22 28999999987665 48889999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchh-hhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANH-LTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~-~~~~~~~~~~yl~~~~ 185 (367)
+||++|++++||++|+.+.+..+ .. . .+|+++.++|||++++.+ +|.+++..... ... ..+....
T Consensus 180 la~~~gi~liVD~t~a~~~~~~p-l~---~---GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~-----~~~~~~~- 246 (436)
T PRK07812 180 VAHEAGVPLIVDNTIATPYLIRP-LE---H---GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQ-----GRFPGFT- 246 (436)
T ss_pred HHHHcCCEEEEECCCcccccCCc-hh---c---CCCEEEEecccccCCCCCeEEEEEEcCCcccccc-----ccccccc-
Confidence 99999999999999987544321 11 2 359999999999986632 56666643211 100 0011000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
...+.|.-..+.. ++.++...... ..+....|.....+..| +...|.+.+..++++..+.+..+
T Consensus 247 ----~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~G~~l~p~~a~--l~~rgl~tL~~R~~~~~~nA~~l 310 (436)
T PRK07812 247 ----TPDPSYHGVVFAE--LGPPAYALKAR--------VQLLRDLGSAISPFNAF--LIAQGLETLSLRIERHVANAQRV 310 (436)
T ss_pred ----cCCcccccchhhh--cchhHHHHHHH--------HHHHHhcCCCCCHHHHH--HHhcCcCcHHHHHHHHHHHHHHH
Confidence 0001110000000 00000000000 00000112222334444 44457778899999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C------------CceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEeE--
Q psy3048 266 ADLVEKDDRFE-LVCP-----P------------SMGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKAS-- 316 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~~-- 316 (367)
.+.|+++|++. +..| | ..++++|.+.+......++.+.|.--.. ..+.|..
T Consensus 311 a~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~ 390 (436)
T PRK07812 311 AEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTT 390 (436)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCC
Confidence 99999999875 4444 1 1368899986533345567776542110 0111110
Q ss_pred ---E-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 317 ---F-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 317 ---~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. . ..+.+|+|+. -||++.+++.|++.++.++
T Consensus 391 h~~~~~~~~~~~gi~~~liRlSvG-----lEd~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 391 HSQLTPEEQLATGVTPGLVRLAVG-----IEGIDDILADLEAGFAAAK 433 (436)
T ss_pred cccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhhh
Confidence 0 1 1458999774 3689999999999888654
No 175
>KOG0259|consensus
Probab=99.66 E-value=1.5e-14 Score=131.94 Aligned_cols=271 Identities=13% Similarity=0.113 Sum_probs=178.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
+-.|+.++.++.-...-+.+.|++|+.+++ +++|.+|++.+|+.++++| +.++++.|+|+.|.+ +=+++
T Consensus 150 ~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~k 223 (447)
T KOG0259|consen 150 GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKK 223 (447)
T ss_pred CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHH
Confidence 455566666655555566778999999877 5789999999999999998 588889999999998 56899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecc-cc-ccccCCcceeEEEecchh-hhhhc--cCCcc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNA-HK-WLLTNHDCSAMWVKNANH-LTNTF--FTDRV 179 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~-hK-~l~~p~g~g~l~~~~~~~-~~~~~--~~~~~ 179 (367)
|+++|+++|++++.|+.|+-..+....+-+...=.+.+-+++.++ .| |+--++.+||+.+.++.- ++... .....
T Consensus 224 iae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~ 303 (447)
T KOG0259|consen 224 IAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKN 303 (447)
T ss_pred HHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHH
Confidence 999999999999999998766554333222100012346666663 45 555459999999977532 21110 00001
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
++.. ..+|. .+-+-++-..|..-.++-+++...-..
T Consensus 304 ~~~~-------------------------------~~~p~-------------TiiQ~AlP~IL~kTp~efF~k~~~~lk 339 (447)
T KOG0259|consen 304 FLDI-------------------------------IPGPA-------------TIIQGALPDILEKTPEEFFDKKLSFLK 339 (447)
T ss_pred HHhc-------------------------------cCCcc-------------HhHHHHhHHHHHhChHHHHHHHHHHHH
Confidence 1100 01110 011122233344444556777777788
Q ss_pred HHHHHHHHHhcCCCCeEEeCCC-CceeEEEEEcCC----chHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCC
Q psy3048 260 SLAKKFADLVEKDDRFELVCPP-SMGLVCFRLKGD----NDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETN 333 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~----~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~ 333 (367)
.+++.-.++|+++|++.+...| ......+.+.-. -+..-+++.+|..+-.+++-|+. +.-++++|+++.. .
T Consensus 340 ~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~---~ 416 (447)
T KOG0259|consen 340 SNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV---E 416 (447)
T ss_pred hhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc---C
Confidence 8899999999999999966544 333333333211 12234788888877766655544 4458899997654 5
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q psy3048 334 QCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~~~ 353 (367)
.++++.++++|+++.++..+
T Consensus 417 ~~~leea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 417 EEMLEEAFSRIKEFCDRHSK 436 (447)
T ss_pred hHHHHHHHHHHHHHHHhhhh
Confidence 78999999999999987663
No 176
>PLN02656 tyrosine transaminase
Probab=99.65 E-value=1.9e-14 Score=139.95 Aligned_cols=262 Identities=10% Similarity=0.004 Sum_probs=163.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|++++.+|..+...+...|++++.++++ +++.+|+++|++++++.+ .++++++++|+||.+ +++++|
T Consensus 121 d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~s~~~~~~i 194 (409)
T PLN02656 121 ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPCGNVYSYQHLKKI 194 (409)
T ss_pred CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCCCCCCCHHHHHHH
Confidence 356667888888888888899999999984 357899999999886654 478888999999999 579999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeeccccc-cccCCcceeEEEecc-------hhhhhhcc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKW-LLTNHDCSAMWVKNA-------NHLTNTFF 175 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~-l~~p~g~g~l~~~~~-------~~~~~~~~ 175 (367)
+++|++||+++++|++|+...+........ +... .--++..+..|. +..+..+|+++..++ ..+.....
T Consensus 195 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~ 273 (409)
T PLN02656 195 AETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI-VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKK 273 (409)
T ss_pred HHHHHHcCCEEEEehhhhhcccCCCCcccHHHhccc-CcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHH
Confidence 999999999999999998654422111110 1111 113556678998 444488999887432 22221100
Q ss_pred CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHH
Q psy3048 176 TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 176 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
. .... . +...+.+..+..++.......+++..
T Consensus 274 ~-~~~~-~----------------------------------------------~~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 274 Y-FDIL-G----------------------------------------------GPATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred H-Hhhh-c----------------------------------------------CCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 0 0000 0 00001112222233221234567777
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCC-CceeEEEEEcCC---c-hHHHHH-HHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPP-SMGLVCFRLKGD---N-DLTNQL-YERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~---~-~~~~~l-~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
++..+..+++.+.|++++++....+| ....++++++.. + ....++ .+.+.++|+....++.+...+++|++++.
T Consensus 306 ~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~ 385 (409)
T PLN02656 306 NILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA 385 (409)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC
Confidence 77888888899999887655433334 334455555310 0 113344 44556677544433344446799998753
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~ 350 (367)
++++++..++.|++++++
T Consensus 386 ---~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 386 ---DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred ---CHHHHHHHHHHHHHHHHH
Confidence 588899999988887664
No 177
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.65 E-value=1.3e-14 Score=140.37 Aligned_cols=242 Identities=14% Similarity=0.144 Sum_probs=156.1
Q ss_pred EEEecCCcchh----HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s----~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.. +...+...|+++++++.+ |+++++++++++++ +|++.+++|++|.+.|+++|++
T Consensus 111 ~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~ 179 (403)
T PRK07810 111 RLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-----DLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSE 179 (403)
T ss_pred EEEEccCCcchHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHH
Confidence 45566655533 334456689999999753 89999999987663 8888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|++++||++|+.+....+ .. . .+|+++.+++|+++++.. .|+++.++ +.+...+. .+....
T Consensus 180 la~~~g~~vivD~a~a~~~~~~~-~~---~---gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~~~- 247 (403)
T PRK07810 180 LAHAAGAKVVLDNVFATPLLQRG-LP---L---GADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMRHT- 247 (403)
T ss_pred HHHHcCCEEEEECCCCccccCCh-hh---c---CCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHHHh-
Confidence 99999999999999976544221 11 1 359999999999986532 46665543 32321110 010000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
+.....+..|..+ .+.+-+..++++..+++.++
T Consensus 248 ---------------------------------------------g~~~s~~~a~l~l--~~L~tl~~R~~~~~~~a~~~ 280 (403)
T PRK07810 248 ---------------------------------------------GPALSAFNAWVLL--KGLETLALRVRHSNASALRI 280 (403)
T ss_pred ---------------------------------------------CCCCCHHHHHHHH--hccCcHHHHHHHHHHHHHHH
Confidence 0001123333333 35667888999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCC----chHHHHHHHHHhccC---------cEEEEEe
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGD----NDLTNQLYERLMSHK---------QIYIIKA 315 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~----~~~~~~l~~~L~~~g---------~~~~~~~ 315 (367)
.+.|+++|++. +..| | ..++++|.+.+. .+...+++++|.--. .+...|.
T Consensus 281 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~ 360 (403)
T PRK07810 281 AEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPA 360 (403)
T ss_pred HHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCC
Confidence 99999999875 4433 2 246889998641 223345555432111 1111111
Q ss_pred E-----E-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 316 S-----F-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 316 ~-----~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
. . . +.+.+|+|+. -||++.+++.|++.+
T Consensus 361 ~~~h~~~~~~~~~~~gi~~~lvR~svG-----lE~~~dli~dl~~Al 402 (403)
T PRK07810 361 TTTHRAMGPEGRAAIGLGDGVVRLSVG-----LEDTDDLIADLDRAL 402 (403)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHhh
Confidence 0 0 0 2458999764 367888888888763
No 178
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.65 E-value=2.1e-14 Score=139.00 Aligned_cols=254 Identities=11% Similarity=0.024 Sum_probs=156.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.++......+...|++++.++.+. ++.+|+++|++++.+.+ .++++++++|+||.+-+ +++
T Consensus 121 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~ 194 (394)
T PRK05942 121 GDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEE 194 (394)
T ss_pred CCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHH
Confidence 34577778899888888888999999998863 46799999999886544 47888899999999976 889
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+....... .+.+.....+.+.+..|.++ .+..+|+++.. +..++...... .+.
T Consensus 195 i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~~~l~~~~-~~~ 272 (394)
T PRK05942 195 IVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHIIQGLRTLK-TNL 272 (394)
T ss_pred HHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHHHHHHHHH-hhc
Confidence 999999999999999998755432111000 01111122455677889885 44568988763 33333211000 000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
.+ .. ..+....+..+++ ...+.+++..++..+.
T Consensus 273 ------------~~-------------------------------~~---~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~ 305 (394)
T PRK05942 273 ------------DY-------------------------------GI---FSALQKAAETALQ-LPDSYLQQVQERYRTR 305 (394)
T ss_pred ------------cc-------------------------------CC---CHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 00 00 0011122223333 2345667777778888
Q ss_pred HHHHHHHhcCCCCeEEeCCCCce-eEEEEEcCCchHHHHHHHHHh-ccCcEEEEEe-EE--CCeeEEEEEecCCCCCHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMG-LVCFRLKGDNDLTNQLYERLM-SHKQIYIIKA-SF--QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~-~~--~~~~~lRi~~~~~~~~~ed 336 (367)
.+++.+.|++. |+.+.. +..+ .++++++. .....++.+++. +.|+ .+.++ .+ .+..++|+++.. +
T Consensus 306 ~~~~~~~L~~~-~~~~~~-~~~~~f~~~~~~~-~~~~~~~~~~~l~~~gV-~v~~g~~f~~~~~~~iRis~~~------~ 375 (394)
T PRK05942 306 RDFLIQGLGEL-GWNIPP-TKATMYLWVPCPV-GMGSTDFALNVLQKTGV-VVTPGNAFGEGGEGYVRISLIA------D 375 (394)
T ss_pred HHHHHHHHHHC-CCeecC-CCeeeEEEEECCC-CCCHHHHHHHHHHHCCE-EEeCChhhCcCCCCeEEEEecC------C
Confidence 88899999876 776554 3444 45566653 222456666554 5664 44433 22 235799998742 2
Q ss_pred HHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQS 348 (367)
Q Consensus 337 id~li~~l~~~~ 348 (367)
.+++.++|+++.
T Consensus 376 ~~~l~~~l~~l~ 387 (394)
T PRK05942 376 CDRLGEALDRLK 387 (394)
T ss_pred HHHHHHHHHHHH
Confidence 455555555553
No 179
>PLN02452 phosphoserine transaminase
Probab=99.65 E-value=1.5e-14 Score=137.53 Aligned_cols=249 Identities=12% Similarity=0.014 Sum_probs=161.2
Q ss_pred Ccchh--HHHHHHhCCcceEEEecCCCC---CcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc-cCChhhHHHHHhh
Q psy3048 38 QSNSS--VEKSAIIGDVPVRQLRSDDNG---VLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA-FDNLEELGPICQE 111 (367)
Q Consensus 38 ~~H~s--~~~~~~~~g~~v~~v~~~~~~---~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~-i~dl~~I~~l~~~ 111 (367)
++.++ +.+.++..|...+.....++. ..++++++. .. .+..|.+++.+|.+|+ ++|++++.+
T Consensus 103 ~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~v~~~hnETstGv~~~~~~~i~~---- 170 (365)
T PLN02452 103 TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL----TP----DAKFVHICANETIHGVEFKDYPDVGN---- 170 (365)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC----CC----CCcEEEECCCCCCCcEecCcccccCC----
Confidence 55665 344445556544433222222 456666521 11 1358999999999999 599988864
Q ss_pred cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCC
Q psy3048 112 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQ 191 (367)
Q Consensus 112 ~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 191 (367)
++++||++++.+..+.+..++ ++..+++||+++ |+|+|+++++++. +++.....+.|+.-...
T Consensus 171 --~~lvVDa~Ss~g~~pidv~~~--------~v~~~saqK~lG-P~Gl~~v~vr~~~-l~~~~~~~~~~~~~~~~----- 233 (365)
T PLN02452 171 --VPLVADMSSNFLSKPVDVSKY--------GVIYAGAQKNVG-PSGVTIVIIRKDL-IGNARPITPGMLDYKIH----- 233 (365)
T ss_pred --CeEEEECCccccCcccCHHHc--------CEEEEecccccC-CCCeEEEEEcHHH-HhhcccCCCchhhHHHH-----
Confidence 899999999888776653322 444469999985 9999999997543 33321111222211000
Q ss_pred CCCchhhhhhcccCCCcchhccCCCCCCCCcccccccc-ccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHh
Q psy3048 192 SPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTP-LSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L 269 (367)
. .....- ..+-+..+.+..+++.+..+ |++++.++++++++++++.|
T Consensus 234 ----------~---------------------~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l 282 (365)
T PLN02452 234 ----------A---------------------ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAI 282 (365)
T ss_pred ----------H---------------------hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 0 000000 11123346777888888776 89999999999999999999
Q ss_pred cCCCCeEEe-CCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 270 EKDDRFELV-CPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 270 ~~~~g~~~~-~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
++.+||... .++ ...+++|++++. ...+++.+.+.++|.+.+.+...-+ .+|++. ....+.++++.|++.++
T Consensus 283 ~~~~G~y~~~~~~~~rs~~~vsF~~~~~-~~~~~f~~~~~~~g~~~~~G~r~~g--g~R~s~-yna~~~~~v~~L~~~m~ 358 (365)
T PLN02452 283 DESNGFYVCPVEKSVRSLMNVPFTLGGS-ELEAEFVKEAAKAGMVQLKGHRSVG--GMRASI-YNAMPLAGVEKLVAFMK 358 (365)
T ss_pred HhCCCcccCCCChHHhCCeEEEEEcCCc-hhHHHHHHHHHHCCCcccCCccccC--ceEEEC-cCCCCHHHHHHHHHHHH
Confidence 998887222 121 335788998764 4677899999999965433221122 399965 56778999999999999
Q ss_pred HHHHH
Q psy3048 346 HQSSE 350 (367)
Q Consensus 346 ~~~~~ 350 (367)
++.++
T Consensus 359 ~f~~~ 363 (365)
T PLN02452 359 DFQAK 363 (365)
T ss_pred HHHHh
Confidence 98654
No 180
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=1.2e-14 Score=139.76 Aligned_cols=244 Identities=18% Similarity=0.181 Sum_probs=158.6
Q ss_pred eEEEecCCcchhHHHHHH---hCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~---~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|+++...|.+....++ ..|+++++++. |+++|++++++ .+ .+|++.+++|++|.+.|+++|+
T Consensus 93 D~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~------d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~ 160 (385)
T PRK08574 93 DRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP------STEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVA 160 (385)
T ss_pred CEEEEcCCCchhHHHHHHHhhccCcEEEEECC------CHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHH
Confidence 356677889988776653 35777776642 68899999876 44 4777899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||++|+++++|++|+.+....+ .. . .+|+++.+.+|++++|.+ .|++++.+++..++.... ..+. +
T Consensus 161 ~la~~~gi~livD~t~a~~~~~~~-l~---~---GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-~~~~--g 230 (385)
T PRK08574 161 KAAKELGAILVVDNTFATPLLYRP-LR---H---GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-RRRL--G 230 (385)
T ss_pred HHHHHcCCEEEEECCCCccccCCh-hh---h---CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-HHhc--C
Confidence 999999999999999976543221 11 2 359999999999998754 354666555433322100 0000 0
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.....+..+ +...+.+-+..++++..+++.+
T Consensus 231 -----------------------------------------------~~~~p~~a~--l~l~~l~tL~~R~~~~~~na~~ 261 (385)
T PRK08574 231 -----------------------------------------------TIMQPFEAY--LVLRGLKTLEVRFERQCRNAMA 261 (385)
T ss_pred -----------------------------------------------CCCCHHHHH--HHHcccCcHHHHHHHHHHHHHH
Confidence 001112223 3333455677888999999999
Q ss_pred HHHHhcCCCCeE-EeCCC------------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe-
Q psy3048 265 FADLVEKDDRFE-LVCPP------------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA- 315 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~~------------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~- 315 (367)
+.+.|+++|.+. +..|. ..++++|.+++..+...++.+.|.--. .....|.
T Consensus 262 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~ 341 (385)
T PRK08574 262 IAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLKLIKPSPSLGGVESLATYPVK 341 (385)
T ss_pred HHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCCcceEccCCCCCcceeeCCCc
Confidence 999999998875 44431 134889998653333456666553211 0011110
Q ss_pred -EE----------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 316 -SF----------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 316 -~~----------~~--~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.+ .| .+.+|+|+. -||++.+++.|++.+++
T Consensus 342 ~~~~~~~~~~~~~~gi~~~liR~svG-----lE~~~dli~dl~~al~~ 384 (385)
T PRK08574 342 SAASPIPEEDRKALGITEDLVRLSVG-----LEDVEDLIEDLDQALGS 384 (385)
T ss_pred CCcccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHhc
Confidence 00 01 458999874 36789999999888754
No 181
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.65 E-value=2.3e-14 Score=138.76 Aligned_cols=260 Identities=12% Similarity=-0.007 Sum_probs=159.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
-.|++++.++..+...++..|++++.++.+++ +.+|+++|++++++.+ .+|++++++|++|.+.| +++|+
T Consensus 121 d~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~~~~~~~~l~ 194 (394)
T PRK06836 121 DEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKT------KAVIINSPNNPTGVVYSEETLKALA 194 (394)
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCc------eEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 45667788888888888889999999998755 7899999999997654 47788899999999865 67777
Q ss_pred HHHhh------cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcc
Q psy3048 107 PICQE------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 107 ~l~~~------~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
++|++ ||+++++|++|....+............ .-.++..+..|.++.| .++|+++..+.. . ........
T Consensus 195 ~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~~~-~-~~~~~~~~ 271 (394)
T PRK06836 195 ALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNPEM-E-DADDLVAA 271 (394)
T ss_pred HHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecCHHH-h-hhHHHHHH
Confidence 77888 8999999999976543211111101111 1257778899999744 578888874321 1 00000000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+..... ...+ + . ...+...+..+.+ .++. ..++..
T Consensus 272 -~~~~~~-----~~~~------------------------------~---~---~~~~~q~~~~~~l-~~~~--~~~~~~ 306 (394)
T PRK06836 272 -LVFANR-----ILGF------------------------------V---N---APALMQRVVAKCL-DATV--DVSIYK 306 (394)
T ss_pred -HHHHhh-----cccc------------------------------c---c---CCHHHHHHHHHHh-CChH--HHHHHH
Confidence 000000 0000 0 0 0011111111222 1221 123455
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
+..+.+.+.|+++ |+++..+.....++.+++. ....++.+.|.+.|+.......+...+++|++++ .++++++.
T Consensus 307 ~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~~ 380 (394)
T PRK06836 307 RNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPE--EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTETIER 380 (394)
T ss_pred HHHHHHHHHHHhC-CCEeecCCceEEEEEeCCC--CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHHHHH
Confidence 6677788888887 7776654433344444543 2356777888878754333333333569999774 36899999
Q ss_pred HHHHHHHHHHH
Q psy3048 340 AWNEISHQSSE 350 (367)
Q Consensus 340 li~~l~~~~~~ 350 (367)
.++.|++++++
T Consensus 381 ~i~~l~~~l~~ 391 (394)
T PRK06836 381 SLPAFEKLAKE 391 (394)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 182
>PRK07777 aminotransferase; Validated
Probab=99.65 E-value=2.5e-14 Score=138.13 Aligned_cols=256 Identities=13% Similarity=0.016 Sum_probs=161.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
.|++....|.....++...|.+++.++.++ ++.+|+++|++++++.+ .+|++++++|+||.+- ++++|
T Consensus 111 ~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l 184 (387)
T PRK07777 111 EVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLTAAELAAI 184 (387)
T ss_pred EEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCCHHHHHHH
Confidence 556667788888888888999999998864 36799999999886544 4777889999999984 58899
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+++|++||+++++|++|+...+....... ...+....+++..+.+|.++.| ..+|+++... ..+.... ....+..
T Consensus 185 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~~~~~-~~~~~~~ 262 (387)
T PRK07777 185 AELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-PLIAAVR-AAKQYLT 262 (387)
T ss_pred HHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH-HHHHHHH-HHHhhcc
Confidence 99999999999999999765442211101 1112223478889999999744 4578777643 2222111 0001100
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. . .......+..++.. +...+++..++..+..
T Consensus 263 ~~-------------------------------------------~---~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 295 (387)
T PRK07777 263 YV-------------------------------------------G---GAPFQPAVAHALDH-EDAWVAALRDSLQAKR 295 (387)
T ss_pred cC-------------------------------------------C---CCHHHHHHHHHHhC-CcHHHHHHHHHHHHHH
Confidence 00 0 00001111122221 2345566677788889
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-chHHHHHHHHHhc-cCcEEEEEeE-E-----CCeeEEEEEecCCCCCH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGD-NDLTNQLYERLMS-HKQIYIIKAS-F-----QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~-~g~~~~~~~~-~-----~~~~~lRi~~~~~~~~~ 334 (367)
+++.+.|+++ |+++..+.....+++++++. ...+.++.+.|.+ .| +.+.++. + .+..++|+++.. .+
T Consensus 296 ~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~~~~~Ri~~~~---~~ 370 (387)
T PRK07777 296 DRLAAGLAEA-GFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVG-VAAIPMSVFYDPADAWNHLVRFAFCK---RD 370 (387)
T ss_pred HHHHHHHHhC-CCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCC-EEEeCchHhCCCCcCCCCeEEEEecC---CH
Confidence 9999999886 77765444434444555321 1235788888875 56 4454432 2 124589998743 58
Q ss_pred HHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQ 347 (367)
Q Consensus 335 edid~li~~l~~~ 347 (367)
++++..++.|.++
T Consensus 371 ~~l~~~l~~l~~~ 383 (387)
T PRK07777 371 DTLDEAIRRLRAL 383 (387)
T ss_pred HHHHHHHHHHHHH
Confidence 8899988888765
No 183
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.65 E-value=2.3e-14 Score=135.41 Aligned_cols=235 Identities=14% Similarity=0.023 Sum_probs=153.0
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~l 108 (367)
.|++++.+|.++...++..|++++.++ |+++|+++++ .+ .++++++++|++|.+-| +++|+++
T Consensus 88 ~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~-~~------~~v~i~~p~NPtG~~~~~~~~~~l~~~ 153 (330)
T TIGR01140 88 RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE-EL------DVLVLCNPNNPTGRLIPPETLLALAAR 153 (330)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc-cC------CEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 466778889999888888999998886 8899998883 23 37788999999999977 6777888
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
|+++|+++++|++|+.+.... ....... ...-++++.+.+|+++.| .++|+++..+ +.+........
T Consensus 154 a~~~~~~ii~De~y~~~~~~~-~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~--------- 221 (330)
T TIGR01140 154 LRARGGWLVVDEAFIDFTPDA-SLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHP-ALLARLREALG--------- 221 (330)
T ss_pred hHhcCCEEEEECcccccCCcc-chhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCH-HHHHHHHhcCC---------
Confidence 999999999999997554321 1111111 112368888999998844 5678888753 33332211000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~ 266 (367)
.+ . ...+.+.++.+.+...+ .+...++..++.+++.
T Consensus 222 ------~~-------------------------------~------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 258 (330)
T TIGR01140 222 ------PW-------------------------------T------VNGPARAAGRAALADTAWQAATRARLAAERARLA 258 (330)
T ss_pred ------CC-------------------------------C------chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 00 0 01122333333333333 4566778889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-C--CeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-Q--GRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~--~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
+.|++++.+++. ++....+++.++. ..++.++|.++|+ ++.++.. . +.+++|++++. ..++ ++|+++
T Consensus 259 ~~L~~~~~~~~~-~~~~~f~~~~~~~----~~~l~~~l~~~gi-~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~ 328 (330)
T TIGR01140 259 ALLARLGGLEVV-GGTALFLLVRTPD----AAALHEALARRGI-LIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEA 328 (330)
T ss_pred HHHHhCCCceEC-CCCCeEEEEEcCC----HHHHHHHHHHCCE-EEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHh
Confidence 999998666653 3444444555432 4689999998875 4544432 2 34699997643 3455 888887
Q ss_pred HH
Q psy3048 344 IS 345 (367)
Q Consensus 344 l~ 345 (367)
|+
T Consensus 329 l~ 330 (330)
T TIGR01140 329 LA 330 (330)
T ss_pred hC
Confidence 63
No 184
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.65 E-value=3.4e-14 Score=137.06 Aligned_cols=258 Identities=12% Similarity=0.059 Sum_probs=160.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.++..+...+...|++++.++.+ +++.+|+++|++++++.+ .+|+++.++|+||.+- .+++
T Consensus 113 gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~ 186 (384)
T PRK06348 113 GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKT------KAIILNSPNNPTGAVFSKETLEE 186 (384)
T ss_pred CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCc------cEEEEeCCCCCCCcCCCHHHHHH
Confidence 3467778889999999999999999988863 457799999999886544 3667788999999985 5788
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|.++|++||+++++|++|+...+...... ..+.+...-.++..+..|.++ ....+|+++..+ ..... +.....+.
T Consensus 187 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~-~~~~~-~~~~~~~~- 263 (384)
T PRK06348 187 IAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD-YIIET-AKIINEGI- 263 (384)
T ss_pred HHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCH-HHHHH-HHHHHHhc-
Confidence 99999999999999999986544221100 001111112466678899987 457788888743 22221 10000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. ++ ...+....+..++.. ..+.+++..+...+..
T Consensus 264 -----------~-------------------------------~~---~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~ 297 (384)
T PRK06348 264 -----------C-------------------------------FS---APTISQRAAIYALKH-RDTIVPLIKEEFQKRL 297 (384)
T ss_pred -----------c-------------------------------CC---CCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHH
Confidence 0 00 000111122222221 2233555666677778
Q ss_pred HHHHHHhcCCCCeEEeCCCCce-eEEEEEcCCchHHHHHHHHHhc-cCcEEEEEe-EE--CCeeEEEEEecCCCCCHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMG-LVCFRLKGDNDLTNQLYERLMS-HKQIYIIKA-SF--QGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~-~~--~~~~~lRi~~~~~~~~~edi 337 (367)
+++.+.|++++++++.. |+.+ .++++++.......++.+.+.+ .|+ .+.++ .+ .+..++|++++ .+.+++
T Consensus 298 ~~~~~~L~~~~~~~~~~-p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv-~v~pg~~f~~~~~~~iRi~~~---~~~~~l 372 (384)
T PRK06348 298 EYAYKRIESIPNLSLHP-PKGSIYAFINIKKTGLSSVEFCEKLLKEAHV-LVIPGKAFGESGEGYIRLACT---VGIEVL 372 (384)
T ss_pred HHHHHHHhcCCCceecc-CCeeEEEEEecccCCCCHHHHHHHHHHhCCE-EEcCchhhccCCCCeEEEEec---CCHHHH
Confidence 88899998887776554 4434 3455554212235678887764 564 44433 22 23569999763 368888
Q ss_pred HHHHHHHHHH
Q psy3048 338 AFAWNEISHQ 347 (367)
Q Consensus 338 d~li~~l~~~ 347 (367)
+..++.|+++
T Consensus 373 ~~al~~l~~~ 382 (384)
T PRK06348 373 EEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHhh
Confidence 8888888654
No 185
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.64 E-value=6.7e-15 Score=140.42 Aligned_cols=215 Identities=13% Similarity=0.175 Sum_probs=146.1
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
..|+++++++++++++ +|++.+++|++|.+.|+++|+++||++|+++++|++++...... .. + ..+|
T Consensus 123 ~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~-pl-----~-~gaD 189 (364)
T PRK07269 123 ANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQR-PI-----E-LGAD 189 (364)
T ss_pred cCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC-ch-----h-hCCc
Confidence 3589999999987664 89999999999999999999999999999999999986554321 11 1 1469
Q ss_pred eeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 144 SFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 144 ~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
+.++|.+|+++++.+ .|+++.++++..++... ...++
T Consensus 190 ivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-~~~~~---------------------------------------- 228 (364)
T PRK07269 190 IVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-NLNTT---------------------------------------- 228 (364)
T ss_pred EEEecCceeccCCCcccceEEEeCcHHHHHHHHH-HHHHh----------------------------------------
Confidence 999999999998765 56666655543332210 00000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCe-EEeCCCCceeEEEEEcCCchHHHHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRF-ELVCPPSMGLVCFRLKGDNDLTNQL 300 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~-~~~~~~~~~~v~f~~~~~~~~~~~l 300 (367)
+.....+..| +...+.+.+..+++++.+++.++.+.|+++|++ +++.|+..++++|.+.+ .....++
T Consensus 229 ---------G~~~s~~~a~--l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~-~~~~~~f 296 (364)
T PRK07269 229 ---------GAVLSPFDSY--LLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD-ETRIPHI 296 (364)
T ss_pred ---------CCCCCHHHHH--HHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC-HHHHHHH
Confidence 0001123333 344456678999999999999999999999986 45667788899999864 3333455
Q ss_pred HHHHhccC---------cEEEEEe--EE----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 301 YERLMSHK---------QIYIIKA--SF----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 301 ~~~L~~~g---------~~~~~~~--~~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.+.|.... .+.+.|. .+ . .++.+|+|+. -||++.+++.|++.++
T Consensus 297 ~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvG-----lE~~~dli~dl~~al~ 363 (364)
T PRK07269 297 LNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG-----IEDARDLIADLKQALE 363 (364)
T ss_pred HHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHhc
Confidence 55543211 1122221 10 0 1468999874 3688899999888753
No 186
>PRK08068 transaminase; Reviewed
Probab=99.64 E-value=3.2e-14 Score=137.47 Aligned_cols=257 Identities=12% Similarity=0.031 Sum_probs=158.3
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh---h
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL---E 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl---~ 103 (367)
+.-.|++.+.++......++..|++++.++.++ ++.+|++++++++.+.+ .+|+++.|+|+||.+-+. +
T Consensus 117 ~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~~s~~~~~ 190 (389)
T PRK08068 117 PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAVATKAFFE 190 (389)
T ss_pred CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCcCCHHHHH
Confidence 345677788999999999999999999999863 57789999999886543 478888899999999655 6
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhC--CCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR--GLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|+++|++||+++++|++|+...+.......... +...-.+++.+..|.++. ...+|+++. +++.+.........+
T Consensus 191 ~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~~~~~~ 269 (389)
T PRK08068 191 ETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINLLQDHL 269 (389)
T ss_pred HHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHHHHHhhc
Confidence 7888999999999999999654332111001011 111124677789999964 456888875 333332211110000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
. .. ... ..+..+..++.. +.+.+++..++..+
T Consensus 270 ~-~~---------------------------------------------~~~-~~q~~~~~~l~~-~~~~~~~~~~~~~~ 301 (389)
T PRK08068 270 F-VS---------------------------------------------LFG-AIQDAAIEALLS-DQSCVAELVARYES 301 (389)
T ss_pred c-CC---------------------------------------------CCh-HHHHHHHHHHhC-cHHHHHHHHHHHHH
Confidence 0 00 000 001111122211 23456677777888
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---CCeeEEEEEecCCCCCHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~lRi~~~~~~~~~ed 336 (367)
..+++.+.|+++ |+.+..+.....+++.+++ ...+.++.+.|.++ |+ .+.++.. .+..++|+++.. .++.
T Consensus 302 ~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~~-~~~~~~~~~~l~~~~gi-~v~pg~~f~~~~~~~iRi~~~~---~~~~ 375 (389)
T PRK08068 302 RRNAFISACREI-GWEVDAPKGSFFAWMPVPK-GYTSEQFADLLLEKAHV-AVAPGNGFGEHGEGYVRVGLLT---DEER 375 (389)
T ss_pred HHHHHHHHHHHC-CCcccCCCeeEEEEEECCC-CCCHHHHHHHHHHhCCE-EEecchHhCccCCCeEEEEEcC---CHHH
Confidence 888899999887 7765433332335666653 22356888888864 64 4544322 235699998742 4555
Q ss_pred HHHHHHHHHH
Q psy3048 337 VAFAWNEISH 346 (367)
Q Consensus 337 id~li~~l~~ 346 (367)
+...++.|++
T Consensus 376 l~~al~~l~~ 385 (389)
T PRK08068 376 LREAVERIGK 385 (389)
T ss_pred HHHHHHHHHH
Confidence 5555555543
No 187
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.64 E-value=3.2e-14 Score=137.68 Aligned_cols=246 Identities=16% Similarity=0.170 Sum_probs=156.1
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|... ...+...|++++.++.+ |+++|++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 106 ~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~t------klV~le~p~NPtG~~~di~~I~~ 174 (403)
T PRK07503 106 EVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-----DPAALKAAISDKT------RMVYFETPANPNMRLVDIAAVAE 174 (403)
T ss_pred EEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-----CHHHHHHhcCccC------cEEEEeCCCCCCCeeeCHHHHHH
Confidence 455566666442 33455689999988764 7999999997765 37778899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|+++|+++++|++|+.+.... ... . .+|+++.|.+|+++++.+ .|+++ .+++...+..... . ...
T Consensus 175 la~~~gi~lIvD~a~a~~~~~~-~l~---~---g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~---~-~~~ 242 (403)
T PRK07503 175 IAHGAGAKVVVDNTYCTPYLQR-PLE---L---GADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEG---L-KDM 242 (403)
T ss_pred HHHHcCCEEEEECCCcccccCC-chh---h---CCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhh---H-HhC
Confidence 9999999999999997653321 111 1 359999999999997644 56655 4544433221000 0 000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. +.....+..+. ...+.+-+..+++++.+++..+
T Consensus 243 ~--------------------------------------------g~~~s~~~a~l--~l~~L~tl~~r~~~~~~na~~~ 276 (403)
T PRK07503 243 T--------------------------------------------GAVMSPFDAFL--LMRGLKTLALRMDRHCASAQAV 276 (403)
T ss_pred c--------------------------------------------CCCCCHHHHHH--HHcCcchHHHHHHHHHHHHHHH
Confidence 0 00011233333 3335567778888899999999
Q ss_pred HHHhcCCCCeEEe-CC-----C-----------CceeEEEEEcCCchHHHHHHHHHhc--cCc-------EEEEE-----
Q psy3048 266 ADLVEKDDRFELV-CP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMS--HKQ-------IYIIK----- 314 (367)
Q Consensus 266 ~~~L~~~~g~~~~-~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~--~g~-------~~~~~----- 314 (367)
.+.|+++|.+..+ .| | ..++++|.+.+.......+.+.|.- .+. +...+
T Consensus 277 a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~sl~~~~~~~~h 356 (403)
T PRK07503 277 AEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAESLAQHPASMTH 356 (403)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCCccCcCCCCCcc
Confidence 9999999887633 32 1 1358888886532333455554432 110 00001
Q ss_pred eEE-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 315 ASF-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 315 ~~~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
... . ..+.+|+|+. -||++.+++.|++.++.+
T Consensus 357 ~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~Al~~~ 397 (403)
T PRK07503 357 STYTPEERAEHGISEGLVRLSVG-----LEDVADILADLAQALDAC 397 (403)
T ss_pred ccCCHHHHHhcCCCCCeEEEEEe-----cCCHHHHHHHHHHHHHHH
Confidence 000 0 1458999874 367888888888887654
No 188
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2.7e-14 Score=136.43 Aligned_cols=247 Identities=12% Similarity=0.063 Sum_probs=161.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.++..+...+...|++++.++.+ ++.+|++++++++++.+ .++++++++|+||.+-|.++|.+++
T Consensus 105 gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~l~~~~ 177 (359)
T PRK03158 105 GTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQT------KIVWICNPNNPTGTYVNHEELLSFL 177 (359)
T ss_pred CCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 3457777788888888888899999999986 67899999998886544 3777899999999999999999988
Q ss_pred hh--cCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 110 QE--YNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 110 ~~--~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
+. +|+++++|++|..+.+... ..-...... .-.++..+..|.++.| ..+|+++... +.+.........
T Consensus 178 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~----- 250 (359)
T PRK03158 178 ESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELIEKLNIARPP----- 250 (359)
T ss_pred HhCCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHHHHHHHhcCC-----
Confidence 87 6999999999976543211 000001111 1256667889998743 5568887643 333221110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~ 263 (367)
+ . ...+...++...+. .+..++..++..+..+
T Consensus 251 ----------~-------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 283 (359)
T PRK03158 251 ----------F-------------------------------N------TTRIAQYAAIAALEDQAFLKECVEKNAEGLE 283 (359)
T ss_pred ----------C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 0 0 01122233333332 2334555556667778
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++.+.|++. |+.+. ++..+.+++.+.. ...++.+.|.++|+. +.++ .+..++++|+++. +.+|++++++
T Consensus 284 ~~~~~l~~~-~~~~~-~~~g~~i~~~~~~---~~~~~~~~l~~~gv~-v~~g~~f~~~~~iRi~~~----~~~~~~~l~~ 353 (359)
T PRK03158 284 QYYAFCKEY-GLFYY-PSQTNFIFVDTGR---DANELFEALLKKGYI-VRSGAALGFPTGVRITIG----LKEQNDKIIE 353 (359)
T ss_pred HHHHHHHHC-CCeeC-CCcCcEEEEECCC---CHHHHHHHHHHCCeE-EeeCCCCCCCCeEEEecC----CHHHHHHHHH
Confidence 888888877 77664 4444555555531 256888888888854 4443 2333579999764 6899999999
Q ss_pred HHHHH
Q psy3048 343 EISHQ 347 (367)
Q Consensus 343 ~l~~~ 347 (367)
+|+++
T Consensus 354 al~~~ 358 (359)
T PRK03158 354 LLKEL 358 (359)
T ss_pred HHHHh
Confidence 99886
No 189
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.64 E-value=3.4e-14 Score=137.05 Aligned_cols=256 Identities=13% Similarity=0.027 Sum_probs=157.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++.+.++..+...++..|++++.++.++ ++.+|++++++++.+.+ .+|++++++|+||.+-+ +++
T Consensus 117 gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~ 190 (385)
T PRK09276 117 GDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGAVADLEFFEE 190 (385)
T ss_pred CCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCCCCCHHHHHH
Confidence 34566778888888888889999999999853 46789999998876544 47888899999999966 588
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+....... .+.+...-.+...+..|.++.| ..+|+++.. ++.+...... ...+
T Consensus 191 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~~l~~~~~~~-~~~~ 268 (385)
T PRK09276 191 VVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-ADLIAGLGKV-KSNV 268 (385)
T ss_pred HHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-HHHHHHHHHH-Hhhc
Confidence 899999999999999999765432111000 0111111246677888988633 458888753 3333221100 0000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
... ...+....+..++.. ....+++..++..+.
T Consensus 269 ~~~----------------------------------------------~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~ 301 (385)
T PRK09276 269 DSG----------------------------------------------VFQAIQEAGIAALNG-PQEVVEELRKIYQER 301 (385)
T ss_pred cCC----------------------------------------------CCHHHHHHHHHHHcC-cHHHHHHHHHHHHHH
Confidence 000 000011122222221 234456667777888
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-EC--CeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-FQ--GRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~edi 337 (367)
.+++.+.|+++ |+++..+.....+++++++ .....++.+.|.+ .|+ .+.++. +. +..++|+++.. +++++
T Consensus 302 ~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~ll~~~gi-~v~~g~~f~~~~~~~~Ris~~~---~~~~l 375 (385)
T PRK09276 302 RDILVEGLRKL-GLEVEPPKATFYVWAPVPK-GYTSAEFATLLLDKAGV-VVTPGNGFGEYGEGYFRIALTV---PDERI 375 (385)
T ss_pred HHHHHHHHHhC-CCcccCCCcceEEEEECCC-CCCHHHHHHHHHHhCCE-EECCchhhCCCCCCeEEEEeCC---CHHHH
Confidence 89999999887 7776544333335666643 2235678888765 564 444432 22 24699998742 56777
Q ss_pred HHHHHHHHH
Q psy3048 338 AFAWNEISH 346 (367)
Q Consensus 338 d~li~~l~~ 346 (367)
...++.|.+
T Consensus 376 ~~~l~~l~~ 384 (385)
T PRK09276 376 EEAVERIKK 384 (385)
T ss_pred HHHHHHHhh
Confidence 776666643
No 190
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=2.2e-14 Score=139.72 Aligned_cols=277 Identities=13% Similarity=0.103 Sum_probs=163.0
Q ss_pred eEEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|+++...|.+... .+...|++++.++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|.
T Consensus 103 d~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~t------klV~vesp~NptG~v~dl~~I~ 171 (427)
T PRK05994 103 DEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-----DPASFERAITPRT------KAIFIESIANPGGTVTDIAAIA 171 (427)
T ss_pred CEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHH
Confidence 345666777776443 345679999988754 8999999997755 4888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecch-hhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNAN-HLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~-~~~~~~~~~~~yl~~~ 184 (367)
++||++|+++++|++|+.+.... ... . .+|+++.++|||++++.+ .|.+++.... .+.. .....++...
T Consensus 172 ~la~~~gi~livD~a~a~~~~~~-pl~---~---gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~ 242 (427)
T PRK05994 172 EVAHRAGLPLIVDNTLASPYLIR-PIE---H---GADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEP 242 (427)
T ss_pred HHHHHcCCEEEEECCccccccCC-ccc---c---CCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCC
Confidence 99999999999999998654321 111 1 459999999999997754 5555553221 0100 0000111110
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ... ...+.+..+ ..+..... . ..+....+.....+..| +...+.+-+..+++++.+++.+
T Consensus 243 ~~---~~~-~~~~~~~~~---~~~~~~~~-~--------~~~~~~~G~~~~~~~A~--l~~~~l~tL~~r~~~~~~~a~~ 304 (427)
T PRK05994 243 RP---EYH-GLVLHETFG---NFAFAIAA-R--------VLGLRDLGPAISPFNAF--LILTGIETLPLRMQRHSDNALA 304 (427)
T ss_pred cc---hhh-hhhHHHHhh---hhhhHHHH-H--------HHHHHhcCCCCCHHHHH--HHHcCcccHHHHHHHHHHHHHH
Confidence 00 000 000000000 00000000 0 00000111112233333 4445677889999999999999
Q ss_pred HHHHhcCCCCeE-EeCCC-----------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--
Q psy3048 265 FADLVEKDDRFE-LVCPP-----------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA-- 315 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~~-----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~-- 315 (367)
+.+.|+++|++. +..|. ..++++|.+.+..+...++++.|.--. .....|.
T Consensus 305 la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~ 384 (427)
T PRK05994 305 VAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPAST 384 (427)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCC
Confidence 999999999875 44331 135889998753333446666553211 0111110
Q ss_pred EE----------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 316 SF----------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 316 ~~----------~~--~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.+ .| .+.+|+|+. -||.+.+++.|++.+++
T Consensus 385 ~h~~~~~~~~~~~gi~~~liRlsvG-----lE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 385 THRQLTDEQKVAAGAGPDVVRLSIG-----IEDVDDIIADLEQALAK 426 (427)
T ss_pred CcccCCHHHHHhcCCCCCcEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 00 11 458999774 36888899999888763
No 191
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.64 E-value=5.8e-14 Score=133.95 Aligned_cols=248 Identities=10% Similarity=0.070 Sum_probs=160.4
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|++.+..+..+...++..|++++.++.+. ++.+| +++++.+.+.+ .++++++++|+||.+-+ +++|+
T Consensus 95 ~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~------~~v~~~~P~NPtG~~~~~~~~~~l~ 167 (354)
T PRK06358 95 KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEI------DLVFLCNPNNPTGQLISKEEMKKIL 167 (354)
T ss_pred cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCC------CEEEEeCCCCCCCCccCHHHHHHHH
Confidence 456677888888888888999999999863 35788 66665554333 47778899999999864 88888
Q ss_pred HHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++||+++++|++|.-+.+....... ......+ -++..+..|.++ ....+|+++..++............
T Consensus 168 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~---- 242 (354)
T PRK06358 168 DKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKN-LIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP---- 242 (354)
T ss_pred HHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCC-EEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC----
Confidence 8999999999999999754432211110 0111111 256678899997 6688999877443332221110000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~la 262 (367)
+ . ...+...++...+.. +-+++..+...+..
T Consensus 243 -----------~-------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 274 (354)
T PRK06358 243 -----------W-------------------------------S------INTFADLAGQTLLDDKEYIKKTIQWIKEEK 274 (354)
T ss_pred -----------C-------------------------------c------chHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 0 0 001222222222222 23466667777888
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEEecCCCCCHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~~edid~l 340 (367)
+++.+.|++++|+.+.. +..+.++++++. ..++.+.|.++|+.....+.+. +..++|+++. +.++.+++
T Consensus 275 ~~l~~~L~~~~~~~~~~-~~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l 345 (354)
T PRK06358 275 DFLYNGLSEFKGIKVYK-PSVNFIFFKLEK----PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKL 345 (354)
T ss_pred HHHHHHHhcCCCcEEcC-CcceEEEEEcCc----hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHH
Confidence 88999998888876654 455666666653 3688888888885433333332 3468999764 58899999
Q ss_pred HHHHHHHH
Q psy3048 341 WNEISHQS 348 (367)
Q Consensus 341 i~~l~~~~ 348 (367)
+++|+++.
T Consensus 346 ~~~l~~~~ 353 (354)
T PRK06358 346 LKALEVIL 353 (354)
T ss_pred HHHHHHHh
Confidence 99998864
No 192
>PRK12414 putative aminotransferase; Provisional
Probab=99.64 E-value=1.7e-14 Score=139.07 Aligned_cols=254 Identities=9% Similarity=0.049 Sum_probs=155.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~ 106 (367)
-.|++++.+|......++..|++++.++.+ +++.+|+++|++++++.+ .+|++++++|+||.+ +++++|+
T Consensus 115 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~i~~p~NPTG~~~s~~~~~~i~ 188 (384)
T PRK12414 115 DEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRT------RMIIVNTPHNPSATVFSAADLARLA 188 (384)
T ss_pred CEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCccc------EEEEEcCCCCCCCcCCCHHHHHHHH
Confidence 456677888988888888899999999986 367899999999886544 477888999999997 5789999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++||+++++|++|+-..+........ ..+...-.+++.+..|.++ ....+|+++... +.+..... ...+..
T Consensus 189 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~~l~~-~~~~~~- 265 (384)
T PRK12414 189 QLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMDEIRK-VHQFMV- 265 (384)
T ss_pred HHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHHHHHH-HHhhee-
Confidence 99999999999999997644322111110 1111112477788999986 446688888743 22221100 000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~la 262 (367)
+ . . ..+...++...+.. ..+.+..+...+.+
T Consensus 266 -----------~-------------------------------~---~---s~~~q~a~~~~l~~~~~~~~~~~~~~~~r 297 (384)
T PRK12414 266 -----------F-------------------------------S---A---DTPMQHAFAEALAEPASYLGLGAFYQRKR 297 (384)
T ss_pred -----------c-------------------------------C---C---CcHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 0 0 0 00122222222211 22334555667788
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeE-EEEEcCC-chHHHHHH-HHHhccCcEEEEEeEEC--C--eeEEEEEecCCCCCHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLV-CFRLKGD-NDLTNQLY-ERLMSHKQIYIIKASFQ--G--RPFLRFVVTSPETNQC 335 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v-~f~~~~~-~~~~~~l~-~~L~~~g~~~~~~~~~~--~--~~~lRi~~~~~~~~~e 335 (367)
+++.+.|+++ |+.+.. +..+.+ ++++++. .....++. +.+.+.|+....+..+. + .+++|++++. +++
T Consensus 298 ~~l~~~L~~~-g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~~ 372 (384)
T PRK12414 298 DLLARELAGS-RFELLP-SEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK---DDA 372 (384)
T ss_pred HHHHHHHHhC-CCeecC-CCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC---CHH
Confidence 8888999887 777654 333433 3355321 11234555 44556675443333221 2 4699998753 578
Q ss_pred HHHHHHHHHHH
Q psy3048 336 DVAFAWNEISH 346 (367)
Q Consensus 336 did~li~~l~~ 346 (367)
+++..++.|.+
T Consensus 373 ~~~~~~~rl~~ 383 (384)
T PRK12414 373 TLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHhh
Confidence 88888877754
No 193
>PLN02242 methionine gamma-lyase
Probab=99.64 E-value=3e-14 Score=138.22 Aligned_cols=244 Identities=16% Similarity=0.165 Sum_probs=156.9
Q ss_pred EEEecCCcchhHHHHH-----HhCCcceEEEecCCCCCcCHHHHHHHHHHH-hhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 32 VAYASDQSNSSVEKSA-----IIGDVPVRQLRSDDNGVLRGDALLTAVKED-LAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~-----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~-~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.|+++...+......+ +..|++++.++.+ |+++|++++++. + .+|++++++|++|.+.|+++|
T Consensus 117 ~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~~~t------klV~lesp~NPtG~v~dl~~I 185 (418)
T PLN02242 117 HVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVPGKT------KVLYFESISNPTLTVADIPEL 185 (418)
T ss_pred EEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCcCCC------EEEEEecCCCCCCcccCHHHH
Confidence 4556666665554443 3468888777653 899999998763 4 488899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcc-ccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRV-YLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~-yl~ 182 (367)
+++||+||+++++|++|+.+.+ +... .+ +|+++.+.+|++.++.. .|+++. +++.+......... +..
T Consensus 186 ~~la~~~gi~livDea~~~~~~--~~~~---~g---~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~~~ 256 (418)
T PLN02242 186 ARIAHEKGVTVVVDNTFAPMVL--SPAR---LG---ADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGALML 256 (418)
T ss_pred HHHHHHhCCEEEEECCCCccCC--CHHH---cC---CcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhhhc
Confidence 9999999999999999964332 2111 12 59999999999987644 355553 44433322111000 000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. +.. ..+..+++...+...+..++++..+++
T Consensus 257 ~-----------------------------------------------g~~--~~~~~A~l~~~~l~tl~~r~~~~~~~a 287 (418)
T PLN02242 257 L-----------------------------------------------GPT--MNPKVAFELSERLPHLSLRMKEHCRRA 287 (418)
T ss_pred c-----------------------------------------------CCC--CCHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 0 000 112233333344556677888999999
Q ss_pred HHHHHHhcCCCCeEEeCCC-------------------CceeEEEEEcCCchHHHHHHHHHhcc----Cc---------E
Q psy3048 263 KKFADLVEKDDRFELVCPP-------------------SMGLVCFRLKGDNDLTNQLYERLMSH----KQ---------I 310 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~-------------------~~~~v~f~~~~~~~~~~~l~~~L~~~----g~---------~ 310 (367)
+++.+.|+++ ++++..|. ..++++|.+.+ ......++++|.-- .. +
T Consensus 288 ~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~~~~~~~~~~~slG~~~sl 365 (418)
T PLN02242 288 MEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT-EERANRLMRYLQNSTQFGFMAVSLGYYETL 365 (418)
T ss_pred HHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC-HHHHHHHHHHhhcccccceeeecCCCCCce
Confidence 9999999998 57877541 13688898864 34456777776522 10 0
Q ss_pred EEEEe--E---E-------CC--eeEEEEEecCCCCCHH-HHHHHHHHHHHHHHHh
Q psy3048 311 YIIKA--S---F-------QG--RPFLRFVVTSPETNQC-DVAFAWNEISHQSSEM 351 (367)
Q Consensus 311 ~~~~~--~---~-------~~--~~~lRi~~~~~~~~~e-did~li~~l~~~~~~~ 351 (367)
...+. . . .| .+.+|+|+. -| |+|.+++.|++.++++
T Consensus 366 ~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG-----lE~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 366 MSCSGSSTSSELDPEEKAAAGISPGLVRMSVG-----YTGTLEQRWSQFEKALSAM 416 (418)
T ss_pred eeCCCccccccCCHHHHHhcCCCCCeEEEEec-----CCCCHHHHHHHHHHHHHHh
Confidence 00010 0 0 11 458999774 35 4899999999988765
No 194
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.64 E-value=4.7e-15 Score=138.02 Aligned_cols=263 Identities=16% Similarity=0.108 Sum_probs=170.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC-hhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-LEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-l~~I~~ 107 (367)
.|+.++..|+|..+++...|.+++.|+.. +.-..|++.+++++++.. ..+++.++++.+-..+...| +++|++
T Consensus 103 ~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G---~~~iLcvltttscfapr~~D~i~~Iak 179 (389)
T PF05889_consen 103 YVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELG---ADNILCVLTTTSCFAPRLPDDIEEIAK 179 (389)
T ss_dssp EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHC---GGGEEEEEEESSTTTTB----HHHHHH
T ss_pred eEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhC---CCCeEEEEEecCccCCCCCccHHHHHH
Confidence 44557899999999999999999999862 346677899999986543 34678888888777787755 999999
Q ss_pred HHhhcCcEEEEecccccccccC-hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
||++||+++++.+|||.-.-.+ ...... ...+++|+++-+.-|.|.+|.|.+++...++..+... ...|-+....
T Consensus 180 iC~~~~IPhlvNnAYgvQ~~~~~~~i~~a-~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~v---s~~YpGRas~ 255 (389)
T PF05889_consen 180 ICKEYDIPHLVNNAYGVQSSKCMHLIQQA-WRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAV---SKEYPGRASA 255 (389)
T ss_dssp HHHHHT--EEEEGTTTTT-HHHHHHHHHH-HHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHH---HHTSHSHBTS
T ss_pred HHHHcCCceEEccchhhhHHHHHHHHHHH-HhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHH---HHHhhhhhhc
Confidence 9999999999999998632211 111111 1135679999999999999999999888776554322 1222221110
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
...+-+..-+..+|..|+...+....++..++.
T Consensus 256 -----------------------------------------------sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~ 288 (389)
T PF05889_consen 256 -----------------------------------------------SPSLDLFITLLSLGCTGYGALLKERKASFPYLK 288 (389)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 011233445667799999999999999999999
Q ss_pred HHhcCCC---CeEEeCCCC-ceeEEEEEcCCc----hHHHHHHHHHhccCcEE---EEEeE--------ECCeeEEEEEe
Q psy3048 267 DLVEKDD---RFELVCPPS-MGLVCFRLKGDN----DLTNQLYERLMSHKQIY---IIKAS--------FQGRPFLRFVV 327 (367)
Q Consensus 267 ~~L~~~~---g~~~~~~~~-~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~---~~~~~--------~~~~~~lRi~~ 327 (367)
++|++.. +-.++..|. .-.+.|.+.... .....+...|..+++.- +.+.. .....++-++.
T Consensus 289 erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As 368 (389)
T PF05889_consen 289 ERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS 368 (389)
T ss_dssp HHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH
Confidence 9987642 445555442 334455554321 12347778888877321 11110 01125787754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q psy3048 328 TSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 328 ~~~~~~~edid~li~~l~~~~~ 349 (367)
....++||||.++++|++++|
T Consensus 369 -aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 369 -AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --TT--HHHHHHHHHHHHHHHH
T ss_pred -HhCCCHHHHHHHHHHHHHHhC
Confidence 678899999999999999875
No 195
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.64 E-value=4.3e-14 Score=136.78 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=160.2
Q ss_pred EEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+.. ..++..|+++++++.+ |++++++++++.+ .+|++++++|++|.+.|+++|.+
T Consensus 105 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~e~l~~~i~~~t------klI~iesP~NPtG~v~dl~~I~~ 173 (400)
T PRK06234 105 HVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-----NLEEVRNALKANT------KVVYLETPANPTLKVTDIKAISN 173 (400)
T ss_pred EEEEecCccchHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHHhccCC------eEEEEECCCCCCCCcCCHHHHHH
Confidence 4566667666543 3456689999999764 8999999998765 48888999999999999999999
Q ss_pred HHhhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcccccc
Q psy3048 108 ICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 108 l~~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+||++ |+++++|++|+.+.+..+ .. . .+|+++.+.+|++.++.. .|+++.++ +...........+..
T Consensus 174 la~~~~~~i~livDea~~~~~~~~~-l~---~---g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~~~~~~- 244 (400)
T PRK06234 174 IAHENNKECLVFVDNTFCTPYIQRP-LQ---L---GADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFGIKDMT- 244 (400)
T ss_pred HHHhcCCCCEEEEECCCCchhcCCc-hh---h---CCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHHHHHhc-
Confidence 99997 999999999986644221 11 1 359999999999987643 46666543 333321100000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+.....+..+..+ .+.+-+..++++..++++
T Consensus 245 -----------------------------------------------g~~l~p~~a~l~~--~~l~tl~~r~~~~~~na~ 275 (400)
T PRK06234 245 -----------------------------------------------GSVIGPFEAFLII--RGMKTLQIRMEKHCKNAM 275 (400)
T ss_pred -----------------------------------------------CCCCCHHHHHHHH--hccCcHHHHHHHHHHHHH
Confidence 0001122333333 345556778888899999
Q ss_pred HHHHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEe--
Q psy3048 264 KFADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKA-- 315 (367)
Q Consensus 264 ~l~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~-- 315 (367)
++.+.|+++|.+. +..| | ..++++|.+.+..+...++.+.|..-+. +...|.
T Consensus 276 ~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~ 355 (400)
T PRK06234 276 KVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASM 355 (400)
T ss_pred HHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccC
Confidence 9999999988774 3333 1 2468899987533344567776653320 111111
Q ss_pred EE----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 316 SF----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 316 ~~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+ . .++.+|+|+. -||.+.+++.|++.++.+
T Consensus 356 ~~~~~~~~~~~~~gi~~~l~R~svG-----lE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 356 THSPYTAEERKEAGISDGLVRLSVG-----LEDVDDIIADLKQALDLI 398 (400)
T ss_pred CCCCCCHHHHHhcCCCCCeEEEEeC-----CCCHHHHHHHHHHHHHHH
Confidence 00 0 1468999774 367888898888887764
No 196
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.63 E-value=7e-14 Score=138.58 Aligned_cols=268 Identities=14% Similarity=0.092 Sum_probs=165.1
Q ss_pred ceEEEecCCcchhHHHHHH-hCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~-~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
.-.|++++..+..+...+. ..|++++.|+++ +++.+|+++++++++...+.+..+.+|+++.++||||.+-+ ++
T Consensus 143 GD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~ 222 (496)
T PLN02376 143 GDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLT 222 (496)
T ss_pred CCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHH
Confidence 3457778889988888777 489999999985 46789999999887654333334567888999999999955 67
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhh---hhCC--CC--Ccc--eeeeccccccc-cCCcceeEEEecchhhhhh
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAH---LKRG--LE--YVD--SFAFNAHKWLL-TNHDCSAMWVKNANHLTNT 173 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~---~~~~--~~--~~D--~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~ 173 (367)
+|+++|++||+++++|++|+...+..+.+.. .... .. ..+ .++.+..|.++ .+..+|+++..++.... .
T Consensus 223 ~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~-~ 301 (496)
T PLN02376 223 NLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS-C 301 (496)
T ss_pred HHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHH-H
Confidence 7888999999999999999876543221111 1110 00 012 34678999996 44889998875443222 1
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-----H
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-----L 248 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~ 248 (367)
......+. . ...+...++...+. .
T Consensus 302 ~~~~~~~~--~-------------------------------------------------vs~~~Q~a~~~~L~d~~~~~ 330 (496)
T PLN02376 302 ARKMSSFG--L-------------------------------------------------VSSQTQLMLASMLSDDQFVD 330 (496)
T ss_pred HHHHhhcC--C-------------------------------------------------CCHHHHHHHHHHhCChhHHH
Confidence 10000000 0 00111122222221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC--c----hHHHHHHHHHhccCcEEEEEeE-E--CC
Q psy3048 249 KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD--N----DLTNQLYERLMSHKQIYIIKAS-F--QG 319 (367)
Q Consensus 249 ~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--~----~~~~~l~~~L~~~g~~~~~~~~-~--~~ 319 (367)
+-+++..++..+..+.+.+.|++. |+.++.+.....++++++.. . ....++.+.|.++..+.+.|+. + .+
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~ 409 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTE 409 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCC
Confidence 223344555667777788888775 77765544445556666431 0 1124677777765334555543 3 23
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
++++|+++.. .++++++..++.|++++++..
T Consensus 410 ~g~~Ri~fa~--~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 410 PGWFRICFAN--MDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CCEEEEEeeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 6799998753 357889999999998876433
No 197
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.63 E-value=5.1e-14 Score=136.89 Aligned_cols=271 Identities=9% Similarity=-0.009 Sum_probs=164.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++.+.++..+...++..|++++.++.+ +++.+|+++|++++++.+ ..+++++++|+||.+-+ +++|
T Consensus 122 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPTG~~~s~~~~~~l 195 (409)
T PLN00143 122 ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPCGSVYSYEHLNKI 195 (409)
T ss_pred CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCCCCccCHHHHHHH
Confidence 456677788888888888999999999874 457899999998886544 47778899999999955 7888
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCC--cceeeecccccccc-CCcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY--VDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~--~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+++|++||+++++|++|....+....... ...+.. --+++.+..|.+.. ...+|+++..++..+.+.......+..
T Consensus 196 ~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~ 274 (409)
T PLN00143 196 AETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK 274 (409)
T ss_pred HHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH
Confidence 88999999999999999765442111110 011111 12566778999544 478999887543211100000000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... . . .........+..++.......+++..++.++..
T Consensus 275 ~~~~-------~--------------------------------~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 313 (409)
T PLN00143 275 ALNP-------A--------------------------------P--FPPTFIQAAIPEILEKTTEDFFSKTINILRAAL 313 (409)
T ss_pred HHhc-------c--------------------------------C--CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 0000 0 0 000011112222222112345677777788888
Q ss_pred HHHHHHhcCCCCeEEeCCC-CceeEEEEEcCC---c-hHHHHHHHHH-hccCcEEEEEeEECCeeEEEEEecCCCCCHHH
Q psy3048 263 KKFADLVEKDDRFELVCPP-SMGLVCFRLKGD---N-DLTNQLYERL-MSHKQIYIIKASFQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~---~-~~~~~l~~~L-~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ed 336 (367)
+++.+.|+++++.....+| ....++++++.. . ....++...+ .+.|+....+..+...+++|++++. ++++
T Consensus 314 ~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~---~~~~ 390 (409)
T PLN00143 314 AFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV---EQSS 390 (409)
T ss_pred HHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC---CHHH
Confidence 8888999887554333333 445566666420 1 1244555444 5667544333334446799998753 5889
Q ss_pred HHHHHHHHHHHHHHhh
Q psy3048 337 VAFAWNEISHQSSEMN 352 (367)
Q Consensus 337 id~li~~l~~~~~~~~ 352 (367)
++..++.|.+++++..
T Consensus 391 l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 391 LEDGLGRLKSFCGRHA 406 (409)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999877544
No 198
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.63 E-value=5.5e-14 Score=135.07 Aligned_cols=244 Identities=16% Similarity=0.151 Sum_probs=157.8
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+..... ...|+++..++. .|++++++++++.+ .+|++++++|++|.+.|+++|++
T Consensus 92 ~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~l~~ai~~~t------klV~l~~p~NPtG~~~dl~~I~~ 160 (382)
T TIGR02080 92 LLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQALRAALAQKP------KLVLIETPSNPLLRVVDIAKICH 160 (382)
T ss_pred EEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCc------eEEEEECCCCCCCEecCHHHHHH
Confidence 4666777887655432 223556665542 38999999997655 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+||++|+++++|++|+.+....+ .. . .+|+++.+.+||+.++.+ .|++..++++..++... ...+.+
T Consensus 161 la~~~g~~vvvD~a~~~~~~~~p-l~---~---gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~-~~~~~g--- 229 (382)
T TIGR02080 161 LAKAVGAVVVVDNTFLSPALQNP-LA---L---GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW-WANNLG--- 229 (382)
T ss_pred HHHHcCCEEEEECCCcccccCCc-hh---h---CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH-HHHccC---
Confidence 99999999999999976543221 11 1 359999999999998876 66666655543332110 000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.....+..|..+ .+.+-+..+++++.+++..+
T Consensus 230 ----------------------------------------------~~~sp~~a~l~l--r~l~tl~~R~~~~~~na~~~ 261 (382)
T TIGR02080 230 ----------------------------------------------VTGGAFDSYLTL--RGLRTLVARMRLQQRNAQAI 261 (382)
T ss_pred ----------------------------------------------CCCCHHHHHHHH--cccchHHHHHHHHHHHHHHH
Confidence 001123344433 35567777888999999999
Q ss_pred HHHhcCCCCeE-EeCCC----------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--EE
Q psy3048 266 ADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--SF 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--~~ 317 (367)
.+.|+++|.++ +..|. ..++++|.+++.......+.+.|.--. .+...|. .+
T Consensus 262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 341 (382)
T TIGR02080 262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTH 341 (382)
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEeccCCCCcceeECCCccCc
Confidence 99999999876 44431 236899999752222345666543211 0111110 00
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
. ..+.+|+|+. -||++.+++.|++.+++
T Consensus 342 ~~~~~~~~~~~gi~~~liRlsvG-----lE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 342 AAMGPEARAEAGISDTLLRLSVG-----LEDADDLIADLEQGLRA 381 (382)
T ss_pred ccCCHHHHHhcCCCcCeEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 1 1458999774 36888999999888763
No 199
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=2.6e-14 Score=137.91 Aligned_cols=245 Identities=16% Similarity=0.145 Sum_probs=161.6
Q ss_pred eEEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|..... .+...|+++++++.. +.+++++++++.+ .+|++++++|++|.+.|+++|+
T Consensus 105 D~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~~~t------klV~le~p~Np~~~~~di~~I~ 173 (394)
T PRK07050 105 DDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-----IGAGIADLIQPNT------RLIWLEAPGSVTMEVPDVPAIT 173 (394)
T ss_pred CEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCCCCccHhhHHHHH
Confidence 356667778887554 445679999988753 4578888887665 4888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||++|+++++|++|+.+....+ . ..| +|+.+.+.+|++.+..+ .|++++++++..++... ...+++.
T Consensus 174 ~ia~~~gi~livD~a~a~~~~~~~-l---~~G---aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~-~~~~~G~- 244 (394)
T PRK07050 174 AAARARGVVTAIDNTYSAGLAFKP-F---EHG---VDISVQALTKYQSGGSDVLMGATITADAELHAKLKL-ARMRLGI- 244 (394)
T ss_pred HHHHHcCCEEEEECCcccccccCH-H---HcC---CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH-HHHhcCC-
Confidence 999999999999999987654322 1 123 49999999999987665 56666655544332210 0000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
...++..|.+++ +.+.+..++++..+.+.+
T Consensus 245 ------------------------------------------------~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~ 274 (394)
T PRK07050 245 ------------------------------------------------GVSADDCSLVLR--GLPSLQVRLAAHDRSALE 274 (394)
T ss_pred ------------------------------------------------CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHH
Confidence 011233344433 455667788888899999
Q ss_pred HHHHhcCCCCeEEeC-C-----C-----------CceeEEEEEcCC--chHHHHHHHHHhccCc---------EEEEEeE
Q psy3048 265 FADLVEKDDRFELVC-P-----P-----------SMGLVCFRLKGD--NDLTNQLYERLMSHKQ---------IYIIKAS 316 (367)
Q Consensus 265 l~~~L~~~~g~~~~~-~-----~-----------~~~~v~f~~~~~--~~~~~~l~~~L~~~g~---------~~~~~~~ 316 (367)
+.+.|+++|++.-+. | | ..++++|.+.+. .....++.+.|...+. +.. |..
T Consensus 275 la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~-~~~ 353 (394)
T PRK07050 275 VAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAM-PYD 353 (394)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEe-eCc
Confidence 999999988865432 2 1 246788888652 2344567776654331 111 110
Q ss_pred -----E----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 -----F----QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 -----~----~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
. ...+.+|+|+. -||++.+++.|++.++.+
T Consensus 354 ~~~~~~~~~~~~~~~iR~svG-----lE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 354 VASMRTAKWPHRGTLVRLYIG-----LEDEADLIADLEQALEAA 392 (394)
T ss_pred ccccchhhcCCCCCEEEEEeC-----cCCHHHHHHHHHHHHHHh
Confidence 0 11358999774 367888899998887754
No 200
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.63 E-value=4.5e-14 Score=137.04 Aligned_cols=262 Identities=9% Similarity=-0.005 Sum_probs=158.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++..+......+...+.+++.++++ +++.+|+++|++++.+.+ .+|++++++|+||.+. ++++
T Consensus 117 gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~ 190 (402)
T PRK06107 117 GDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRT------RWLILNAPSNPTGAVYSRAELRA 190 (402)
T ss_pred CCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCc------eEEEEECCCCCCCcCcCHHHHHH
Confidence 4456667777777777777778888888875 346799999999886543 4778889999999885 4677
Q ss_pred HHHHHhhc-CcEEEEecccccccccChh---hhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcc
Q psy3048 105 LGPICQEY-NIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 105 I~~l~~~~-gi~l~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
|+++|++| |+++++|.+|+...+.... ......+...--++..+.+|.++.| ..+|+++... +.+.. +.....
T Consensus 191 l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-~~~~~-~~~~~~ 268 (402)
T PRK06107 191 LADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-DLIAA-INKLQS 268 (402)
T ss_pred HHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-HHHHH-HHHHHH
Confidence 78889998 9999999999754332111 1111111111235556679999633 5578877632 22221 100000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLRK 257 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~~ 257 (367)
+... .. ..+...++...+ +...+++..++
T Consensus 269 ~~~~----------------------------------------------~~---s~~~q~~~~~~l~~~~~~~~~~~~~ 299 (402)
T PRK06107 269 QSSS----------------------------------------------CP---SSISQAAAAAALNGDQSFVTESVAV 299 (402)
T ss_pred hccc----------------------------------------------CC---ChHHHHHHHHHhcCChHHHHHHHHH
Confidence 0000 00 011222222222 23445666667
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcC-------Cc---hHHHHHHHHHh-ccCcEEEEEeEECCeeEEEEE
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKG-------DN---DLTNQLYERLM-SHKQIYIIKASFQGRPFLRFV 326 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~-------~~---~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~ 326 (367)
..+..+.+.+.|++++|+.+..+.....+++++.. .. ....++.+.|. +.|+....+..+...+++|++
T Consensus 300 ~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis 379 (402)
T PRK06107 300 YKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLS 379 (402)
T ss_pred HHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE
Confidence 77888888899988878776544333333444421 01 12346666554 556544433333335799998
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.. +++++++.++.|.++++++
T Consensus 380 ~~~---~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 380 IAT---SLETLEEACARIERAVAAL 401 (402)
T ss_pred eCC---CHHHHHHHHHHHHHHHHhc
Confidence 753 5899999999999887764
No 201
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.63 E-value=9.9e-14 Score=136.88 Aligned_cols=267 Identities=11% Similarity=0.077 Sum_probs=166.7
Q ss_pred ceEEEecCCcchhHHHHHH-hCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chh
Q psy3048 30 RLVAYASDQSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~-~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~ 103 (367)
.-.|++.+..+..+...+. ..|++++.|+++ +++.+|+++|++++++..+++..+.+|++++|+||||.+- .++
T Consensus 135 Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~ 214 (468)
T PLN02450 135 GDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELN 214 (468)
T ss_pred CCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHH
Confidence 4466677788888877777 489999999984 5678899999999977544444466788889999999985 466
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhh---C-----CC--CCcceeeeccccccc-cCCcceeEEEecchhhhh
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLK---R-----GL--EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~---~-----~~--~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~ 172 (367)
+|.++|++||+++++|++|+...+..+.+...+ . +. ..--++..+..|.++ .+..+|+++..+.....
T Consensus 215 ~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~- 293 (468)
T PLN02450 215 LLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVS- 293 (468)
T ss_pred HHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHH-
Confidence 788889999999999999986544221111100 0 00 011356778899986 66889998875433222
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH----
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL---- 248 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 248 (367)
.......+. . ...+...++...+..
T Consensus 294 ~~~~~~~~~--~-------------------------------------------------~s~~~Q~a~~~~L~~~~~~ 322 (468)
T PLN02450 294 AATKMSSFG--L-------------------------------------------------VSSQTQYLLSALLSDKKFT 322 (468)
T ss_pred HHHHHhhcC--C-------------------------------------------------CCHHHHHHHHHHhCCchhH
Confidence 110000000 0 000111121222211
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC---c--hHHHHHHHHHhc-cCcEEEEEeEE-C--
Q psy3048 249 -KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD---N--DLTNQLYERLMS-HKQIYIIKASF-Q-- 318 (367)
Q Consensus 249 -~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~---~--~~~~~l~~~L~~-~g~~~~~~~~~-~-- 318 (367)
.-+++..++..+..+.+.+.|+++ |+.+..+.....++++++.. . ....++.++|.+ .| +.+.|+.. .
T Consensus 323 ~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~g-V~v~PG~~f~~~ 400 (468)
T PLN02450 323 KNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVK-LNISPGSSCHCT 400 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCC-EEEeCccccCCC
Confidence 235566677778888888889887 77654333333555565421 1 112356667765 46 45555432 2
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+++++|++++. .++++++..++.|++++++..
T Consensus 401 ~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 401 EPGWFRVCFAN--MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CCCEEEEEecC--CCHHHHHHHHHHHHHHHHhcc
Confidence 35799997753 357899999999999887654
No 202
>PRK08960 hypothetical protein; Provisional
Probab=99.63 E-value=3.5e-14 Score=137.09 Aligned_cols=259 Identities=10% Similarity=-0.026 Sum_probs=157.2
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
+.-.|++++.+|.+....+...|.+++.++++. ++.+|+++|++++++.+ .++++++++|+||.+-+ ++
T Consensus 115 ~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~~~~~~~ 188 (387)
T PRK08960 115 PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTLLSRDELA 188 (387)
T ss_pred CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcCcCHHHHH
Confidence 345677788999999999988999999998864 46899999999887654 47788899999999865 56
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+|+++|++||+++++|++|....+..+ ... ......-.++..+.+|.++ ....+|+++..+ +.+.........+
T Consensus 189 ~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~-- 263 (387)
T PRK08960 189 ALSQALRARGGHLVVDEIYHGLTYGVD-AAS-VLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPP-AAVPELEKLAQNL-- 263 (387)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCC-CCC-hhhccCCEEEEeecccccCCcccEEEEEEcCH-HHHHHHHHHHhhh--
Confidence 677789999999999999975433211 111 1112111356677899886 335588988743 2222110000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. +...+....+...+.......+++..++..+..
T Consensus 264 --------------------------------------------~~-~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~ 298 (387)
T PRK08960 264 --------------------------------------------YI-SASTPAQHAALACFEPETLAILEARRAEFARRR 298 (387)
T ss_pred --------------------------------------------cc-CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Confidence 00 000011112222232111244556666677778
Q ss_pred HHHHHHhcCCCCeEEeC-CCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEe-EEC---CeeEEEEEecCCCCCHHH
Q psy3048 263 KKFADLVEKDDRFELVC-PPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKA-SFQ---GRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~-~~~---~~~~lRi~~~~~~~~~ed 336 (367)
+.+.+.|+++ |+.+.. |.....++++++.......++.+.|.+ .|+ .+.++ .+. +..++|+++.. +.++
T Consensus 299 ~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi-~v~pg~~f~~~~~~~~iRi~~~~---~~~~ 373 (387)
T PRK08960 299 DFLLPALREL-GFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHV-AFTPGLDFGRHQAGQHVRFAYTQ---SLPR 373 (387)
T ss_pred HHHHHHHHhc-CCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCE-EEcCchHhCCCCCCCeEEEEecC---CHHH
Confidence 8888888886 665433 334444555554311224678877764 564 44443 222 23599998753 4666
Q ss_pred HHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQS 348 (367)
Q Consensus 337 id~li~~l~~~~ 348 (367)
+...++.|++++
T Consensus 374 l~~al~~l~~~~ 385 (387)
T PRK08960 374 LQEAVERIARGL 385 (387)
T ss_pred HHHHHHHHHHHH
Confidence 777666666554
No 203
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=8.7e-14 Score=133.60 Aligned_cols=252 Identities=11% Similarity=0.001 Sum_probs=163.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++.+.++......++..|++++.++.++++.+|+++|++++++.+ .++++++++|+||.+-|.+++.+++
T Consensus 112 gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~ 185 (371)
T PRK05166 112 GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVL 185 (371)
T ss_pred CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 3456677888888888888999999999998778999999999987655 3777899999999998877766666
Q ss_pred hh--cCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 110 QE--YNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 110 ~~--~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
+. +++++++|++|+-+....+ ...........--++..+..|.++ ....+|+++..++.......... ..
T Consensus 186 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~-~~---- 260 (371)
T PRK05166 186 DATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVR-TP---- 260 (371)
T ss_pred HhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhc-cC----
Confidence 53 4899999999875442110 100011111111366778899997 55778887775544332211100 00
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~ 263 (367)
+ . ...+...+++..+ ..+.+++..+...+..+
T Consensus 261 ----------~-------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 293 (371)
T PRK05166 261 ----------F-------------------------------N------VNGAAQAAALAALDDEEHLAKGVALALAERE 293 (371)
T ss_pred ----------C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 0 0 0011222222222 23446666677778888
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++.+.|++. |+.+ .++..+.+++++.. ...++.+.|.++|+ .+.+.. .....++|+++. +.++.+++++
T Consensus 294 ~l~~~L~~~-g~~~-~p~~g~fl~~~~~~---~~~~l~~~l~~~gi-~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~ 363 (371)
T PRK05166 294 RLKKELAEM-GYRI-APSRANFLFFDARR---PASAVAEALLRQGV-IVKPWKQPGFETFIRVSIG----SPEENDHFVA 363 (371)
T ss_pred HHHHHHHHC-cCee-CCCcCCEEEEeCCC---CHHHHHHHHHHCCe-EEecCCCCCCCCeEEEEcC----CHHHHHHHHH
Confidence 899999887 7764 45555555555432 25678889988885 444432 223679999764 4778999999
Q ss_pred HHHHHHH
Q psy3048 343 EISHQSS 349 (367)
Q Consensus 343 ~l~~~~~ 349 (367)
+|+++.+
T Consensus 364 ~l~~i~~ 370 (371)
T PRK05166 364 ALDKVLE 370 (371)
T ss_pred HHHHHhh
Confidence 9988743
No 204
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.63 E-value=3.5e-14 Score=143.16 Aligned_cols=265 Identities=18% Similarity=0.161 Sum_probs=171.3
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC-C----CCcC-----HHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-N----GVLR-----GDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~----~~~d-----~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
+.-.|++++++|.|+..++.+.|+.++++++.. . +.++ ++.+++++++..+ ...|..++++++ |+.|.
T Consensus 234 ~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~ 311 (714)
T PRK15400 234 AGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGL 311 (714)
T ss_pred CCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccE
Confidence 355788899999999999999999999998752 1 3456 8999999987653 234656777776 88999
Q ss_pred cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC-CCc---c--eeeeccccccccCCcceeEEEecchhhh-
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYV---D--SFAFNAHKWLLTNHDCSAMWVKNANHLT- 171 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~---D--~~~~~~hK~l~~p~g~g~l~~~~~~~~~- 171 (367)
+.|+++|.++|+.++ ++||+|||+...+.+.++.. ..+ ..+ | +++-|.||.+.+-.+++++.++.. +.
T Consensus 312 ~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~--vd~ 386 (714)
T PRK15400 312 LYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD--VNE 386 (714)
T ss_pred ecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC--CCH
Confidence 999999999999987 69999999987666544311 112 223 4 999999999999999988887542 11
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGL 251 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 251 (367)
+.+ ...|.... +++++|-+ ..++-.+.+.+....-
T Consensus 387 ~~~--n~a~~m~~-----STSPsY~l--------------------------------------~ASLD~a~~~m~~~~G 421 (714)
T PRK15400 387 ETF--NEAYMMHT-----TTSPHYGI--------------------------------------VASTETAAAMMKGNAG 421 (714)
T ss_pred HHH--HHHHHHHc-----CCCcHHHH--------------------------------------HHHHHHHHHHHHhhhh
Confidence 111 01111111 23344411 1122222223322223
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC------eEEeCCC-----------------------------CceeEEEEEcCC---
Q psy3048 252 QAYLRKHISLAKKFADLVEKDDR------FELVCPP-----------------------------SMGLVCFRLKGD--- 293 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~~g------~~~~~~~-----------------------------~~~~v~f~~~~~--- 293 (367)
++.+++..+++..++++|.++++ |+++.+. ...-+++.+++.
T Consensus 422 ~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~ 501 (714)
T PRK15400 422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKD 501 (714)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCC
Confidence 56777888999999999988877 7776422 112233333331
Q ss_pred ------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 294 ------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 294 ------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
......+.+.|.+.|+ ++..+. ...+=+ +.++..+++++++++++|.++-+.
T Consensus 502 g~~~~~Gipg~~v~~~L~e~gI-~~E~~d---~~~iLf-l~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 502 GTMSDFGIPASIVAKYLDEHGI-VVEKTG---PYNLLF-LFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred ccccccCCCHHHHHHHHHHcCC-EEEecC---CCeEEE-EeCCCCCHHHHHHHHHHHHHHHHh
Confidence 1123466677777774 443322 223333 346788999999999999987543
No 205
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.63 E-value=5e-14 Score=137.97 Aligned_cols=255 Identities=11% Similarity=0.010 Sum_probs=162.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEe-cCCCcccccCChh---hHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVAT-LGTTGTCAFDNLE---ELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~-~~~t~~G~i~dl~---~I~ 106 (367)
-.|++.+.++......++..|++++.|+.++++ +|+++|++++++.+ .+++++ .++||||.+-+.+ +|.
T Consensus 166 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~ 238 (431)
T PRK15481 166 DSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALR 238 (431)
T ss_pred CEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHH
Confidence 456667789999999999999999999997554 89999999986643 355565 8999999997775 999
Q ss_pred HHHhhc-CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 107 PICQEY-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 107 ~l~~~~-gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++|++| ++++++|++|+-.... + ....+.....--++..+..|.++....+|+++.. ++..... .....+..
T Consensus 239 ~la~~~~~~~ii~De~Y~~~~~~-~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~-~~~~~~~-~~~~~~~~--- 311 (431)
T PRK15481 239 NLLARYPQVLVIIDDHFALLSSS-P-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASD-SATSARL-RLRLNSGT--- 311 (431)
T ss_pred HHHHhcCCceEEecCchhhhccC-C-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCC-HHHHHHH-HHHHhccc---
Confidence 999999 9999999999755321 1 1111111111136777889999955667876653 2222211 00000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKK 264 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~ 264 (367)
+ ....+....+..+|..-. .+.+++..+...+..++
T Consensus 312 ----------------------------------------~---~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~ 348 (431)
T PRK15481 312 ----------------------------------------Q---WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQK 348 (431)
T ss_pred ----------------------------------------c---CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 0 000011122222222111 12355666777788888
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC---CeeEEEEEecCCCCCHHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ---GRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~---~~~~lRi~~~~~~~~~edid~li 341 (367)
+.+.|++. |+.+..|.....++++++. + ..++.+.|.++|+....+..+. +..++|+++.. .++++++.++
T Consensus 349 ~~~~L~~~-~~~~~~p~gg~f~~~~l~~-~--~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~ 422 (431)
T PRK15481 349 LARALQQY-GIAIPSPGDGLNLWLPLDT-D--SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLA 422 (431)
T ss_pred HHHHHHHc-CCccccCCCeEEEEEECCC-C--HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHH
Confidence 88888876 7765455566666776653 2 4678888888886544333331 13589998743 3589999999
Q ss_pred HHHHHHH
Q psy3048 342 NEISHQS 348 (367)
Q Consensus 342 ~~l~~~~ 348 (367)
+.|.+++
T Consensus 423 ~~l~~~~ 429 (431)
T PRK15481 423 ADLHQAL 429 (431)
T ss_pred HHHHHHh
Confidence 9998875
No 206
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=4.6e-14 Score=137.26 Aligned_cols=278 Identities=13% Similarity=0.113 Sum_probs=161.1
Q ss_pred EEEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...+......+. ..|+++.+++. .|+++|++++++.++ +|++.+++|++|.+.|+++|.+
T Consensus 99 ~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-----~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~ 167 (425)
T PRK06084 99 NIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-----DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALAD 167 (425)
T ss_pred EEEEeCCCcchHHHHHHHhcccceeEEEEECC-----CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHH
Confidence 34455555554444332 25677776654 389999999987653 7788899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecch-hhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNAN-HLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~-~~~~~~~~~~~yl~~~~ 185 (367)
+||+||+++++|++|+.+....+ .. . .+|+++.+.+||++++. ..|.+++.+.. ........ ..+...
T Consensus 168 la~~~~i~vVvD~a~a~~~~~~p-~~---~---gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~--~~~~~~- 237 (425)
T PRK06084 168 AAHRHGVPLIVDNTVATPVLCRP-FE---H---GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKER--FALLNT- 237 (425)
T ss_pred HHHHcCCEEEEECCCcccccCCh-hh---c---CCCEEEECchhcccccccceeEEEEeCCccchhhcccc--cccccc-
Confidence 99999999999999986544221 11 1 35999999999999763 34555553221 01000000 001000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
..+.|--..|..+..... ...... .......+.....+..| +...+.+.+..++++..+++.++
T Consensus 238 -----~~~~~~~~~~~~~~g~~~-~~~~~~--------~~~~~~~g~~l~~~~a~--l~lrgl~tl~~R~~~~~~na~~l 301 (425)
T PRK06084 238 -----PDPSYHGVTYTEAFGPAA-FIGRCR--------VVPLRNMGAALSPFNAF--LILQGLETLALRMERHTENALKV 301 (425)
T ss_pred -----CCcccccchhhhhcchHH-HHHHHH--------HHHHHhcCCCCCHHHHH--HHHcCcCcHHHHHHHHHHHHHHH
Confidence 000110000000000000 000000 00001112223334444 44446778899999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C----------C--ceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe---
Q psy3048 266 ADLVEKDDRFE-LVCP-----P----------S--MGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--- 315 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~----------~--~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--- 315 (367)
.+.|+++|++. +..| | . .++++|.+.+..+...++.+.|.--. ...+.|.
T Consensus 302 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~ 381 (425)
T PRK06084 302 ARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTT 381 (425)
T ss_pred HHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCC
Confidence 99999999875 4433 1 1 35899999753333456666654211 0111111
Q ss_pred --EE-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 316 --SF-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 316 --~~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.. . .++.+|+|+. -||.+.+++.|++.++..
T Consensus 382 h~~~~~~~~~~~gi~~~liR~svG-----lEd~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 382 HRQLNDEELEKAGVSRDMVRLSIG-----IEHIDDIIADLAQALDAS 423 (425)
T ss_pred cccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHHhh
Confidence 00 0 1468999774 368999999999988754
No 207
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.62 E-value=4.2e-14 Score=135.30 Aligned_cols=188 Identities=18% Similarity=0.103 Sum_probs=122.4
Q ss_pred eEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|......+ ...|++++.++.++++ + .+.+.+ .+|.+..++|++|.+.|+++|+
T Consensus 90 d~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~----~----~~~~~t------~lV~le~p~NPtg~v~di~~I~ 155 (366)
T PRK07582 90 DTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMA----E----AALAGA------DLVLAETPSNPGLDVCDLAALA 155 (366)
T ss_pred CEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChH----H----HhccCc------eEEEEECCCCCCCCccCHHHHH
Confidence 34555667776665543 3479999999875321 1 222333 4778899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc--eeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC--SAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||++|++++||++|+..... .... . .+|+++.+.|||+.+|.|+ |+++.++++..++... ...+...
T Consensus 156 ~~a~~~g~~lvVD~t~~~~~~~-~p~~---~---g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~-~~~~~g~- 226 (366)
T PRK07582 156 AAAHAAGALLVVDNTTATPLGQ-RPLE---L---GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER-WRLLAGA- 226 (366)
T ss_pred HHHHHcCCEEEEECCCCCcccc-Cchh---c---CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH-HHHHhCC-
Confidence 9999999999999998532211 1111 1 3599999999999988874 6666654443332110 0000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
....+..|..++ +.+-++.++++..+++..
T Consensus 227 ------------------------------------------------~~~~~~a~l~~r--~l~tl~~R~~~~~~na~~ 256 (366)
T PRK07582 227 ------------------------------------------------IPGPFEAWLAHR--SLGTLGLRFARQCANALA 256 (366)
T ss_pred ------------------------------------------------CCCHHHHHHHHh--ccccHHHHHHHHHHHHHH
Confidence 011233343333 344567788889999999
Q ss_pred HHHHhcCCCCeEEeC-C-----C-----------CceeEEEEEc
Q psy3048 265 FADLVEKDDRFELVC-P-----P-----------SMGLVCFRLK 291 (367)
Q Consensus 265 l~~~L~~~~g~~~~~-~-----~-----------~~~~v~f~~~ 291 (367)
+.+.|+++|.+.-+. | | ..++++|.+.
T Consensus 257 la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 257 VAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 999999999875432 2 2 3578999986
No 208
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.62 E-value=2.6e-14 Score=137.33 Aligned_cols=266 Identities=11% Similarity=0.099 Sum_probs=163.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...++...|++++.++.+++ +.+|+++|++++++.+ .+|++++ ++|...|+++|.++
T Consensus 71 Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~t------k~i~~~~---~~G~~~~~~~i~~l 141 (375)
T PRK11706 71 GDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKT------RAIVPVH---YAGVACEMDTIMAL 141 (375)
T ss_pred CCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCC------eEEEEeC---CCCCccCHHHHHHH
Confidence 446778889999999999999999999999754 6899999999987654 3555553 58999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCC-----cccc
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTD-----RVYL 181 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~-----~~yl 181 (367)
|++||+++++|+||+.+...... . . + ...|+-++|.| |.+.++ ..|++++.+++...+..... ....
T Consensus 142 a~~~~i~vIeD~a~a~g~~~~~~--~-~-g-~~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (375)
T PRK11706 142 AKKHNLFVVEDAAQGVMSTYKGR--A-L-G-TIGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQF 215 (375)
T ss_pred HHHcCCEEEEECccccccccCCe--e-e-e-cCcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchh
Confidence 99999999999999876532111 0 0 1 11255555555 998653 33555555554443221000 0000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
.... ...| .+. ..+..+..-.+.+++.....+.++++.++.+++
T Consensus 216 ~~~~------~~~~-----------------------------~~~-~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 216 FRGQ------VDKY-----------------------------TWV-DIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred hccC------CCcc-----------------------------eee-ecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0000 000 001112222334444444455678888999999
Q ss_pred HHHHHHHhcCCC--C-eEEeC-CCC----ceeEEEEEcCCchHHHHHHHHHhccCcEEE---EEeEE----------C--
Q psy3048 262 AKKFADLVEKDD--R-FELVC-PPS----MGLVCFRLKGDNDLTNQLYERLMSHKQIYI---IKASF----------Q-- 318 (367)
Q Consensus 262 a~~l~~~L~~~~--g-~~~~~-~~~----~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~---~~~~~----------~-- 318 (367)
++++.+.|++++ + +.+.. ++. ...+.+.++. .....++.+.|.++|+... .+..+ .
T Consensus 260 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~ 338 (375)
T PRK11706 260 WQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGE 338 (375)
T ss_pred HHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCC
Confidence 999999999876 2 44322 221 2233444433 2235688899998885311 01000 0
Q ss_pred -------CeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 319 -------GRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 319 -------~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
....+-+ ++++..+++|+++++++|+++.
T Consensus 339 ~p~a~~~~~~~l~l-P~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 339 DRYTTKESERLLRL-PLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ChHHHHHHhCcEec-cCCCCCCHHHHHHHHHHHHHHh
Confidence 0123545 4677889999999999998863
No 209
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.62 E-value=9.7e-14 Score=143.43 Aligned_cols=265 Identities=12% Similarity=0.062 Sum_probs=167.7
Q ss_pred ceEEEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+..|++++..|+.....++ ..|++++.++ +++|++.+ ++ ..+++++| +..|.++|+++|
T Consensus 153 ~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~~------~~v~~q~P-n~~G~ied~~~i 215 (939)
T TIGR00461 153 ANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--DV------FGCLLQYP-ATDGSILDYKQL 215 (939)
T ss_pred CCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--CE------EEEEEECC-CCCeEEecHHHH
Confidence 4568889999999775554 5788888874 34566555 22 46667776 458999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc----cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL----TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~----~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
++++|+.|.++++++=.-+..+..++.++ | +|+++.++++|.. +.++.|++.+++. +.+.+ ..+.+
T Consensus 216 ~~~~h~~gal~~~~ad~~al~ll~~Pge~---G---aDi~vg~~q~fg~p~g~GGP~aG~~a~~~~--l~r~l--Pgriv 285 (939)
T TIGR00461 216 IDALHSHKSLVSVAADLMALTLLTPPGHY---G---ADIVLGSSQRFGVPMGYGGPHAAFFAVKDE--YNRKM--PGRIV 285 (939)
T ss_pred HHHHHHcCCEEEEEechHHhCCcCCHHHc---C---CcEEeeCCCccCCCCCCCCCceeeeeecHh--hHhhC--CCCce
Confidence 99999999999997644333333333222 4 4999777776644 2446888888653 32221 11222
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
+..... .....|.+. +....+... ..+.....|+..+ .++....++..+|.+|++++.++...
T Consensus 286 G~s~D~--~G~~~~~l~-------------LqtReqhIr-RekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~ 349 (939)
T TIGR00461 286 GVSKDA--LGNTALRLA-------------LQTREQHIR-RDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHS 349 (939)
T ss_pred eEEecC--CCCccceee-------------ccccccccc-ccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 211000 111122000 000010000 0011111122211 12223344677899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~l 340 (367)
++.|+.+.|.+ .|+++..++.+..+.+++.. ...+++.+++.++|+. +.. ...+.+++|+ +..+|++||+.+
T Consensus 350 ~a~~l~~~L~~-~G~~~~~~~fF~~~~v~~~~--~~~~~i~~~~~~~gi~-l~~---~~~~~i~~s~-~E~~t~~di~~l 421 (939)
T TIGR00461 350 LTSILANGLEN-DPHELINKTWFDTLTVKVGN--GISSELLKAAEEFNIN-LRA---VDTTTVGIAL-DETTTKADVENL 421 (939)
T ss_pred HHHHHHHHHHh-CCCcccCCCccceEEEEeCC--CCHHHHHHHHHHCCCe-eee---cCCCEEEEEe-ecCCCHHHHHHH
Confidence 99999999999 59999888778888888742 2367899999999964 322 2235799976 678899999999
Q ss_pred HHHHH
Q psy3048 341 WNEIS 345 (367)
Q Consensus 341 i~~l~ 345 (367)
++.+.
T Consensus 422 ~~~~~ 426 (939)
T TIGR00461 422 LKVFD 426 (939)
T ss_pred HHHhc
Confidence 99995
No 210
>PRK07908 hypothetical protein; Provisional
Probab=99.62 E-value=5.3e-14 Score=133.98 Aligned_cols=241 Identities=14% Similarity=0.083 Sum_probs=155.4
Q ss_pred ecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCc
Q psy3048 35 ASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNI 114 (367)
Q Consensus 35 ~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi 114 (367)
+...++......++..|++++.++.++++.+|++.++ +.+ .++++++++|+||.+-+.++|.++|++ +.
T Consensus 101 v~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~----~~~------~~i~l~np~NPTG~~~~~~~l~~l~~~-~~ 169 (349)
T PRK07908 101 VVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVP----DDA------DLVVIGNPTNPTSVLHPAEQLLALRRP-GR 169 (349)
T ss_pred EeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhc----cCC------CEEEEcCCCCCCCCCcCHHHHHHHHhc-CC
Confidence 3456666667778889999999998766888988553 233 377889999999999999999999974 78
Q ss_pred EEEEecccccccccChhhhhhhCCCCCcceee-eccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCCCCC
Q psy3048 115 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFA-FNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQS 192 (367)
Q Consensus 115 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 192 (367)
++++|++|+-.. ... ... +......++++ .+.+|.++ .+..+|+++.. ++.++........
T Consensus 170 ~iIvDe~y~~~~-~~~-~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~~~~~------------- 232 (349)
T PRK07908 170 ILVVDEAFADAV-PGE-PES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTRGRAH------------- 232 (349)
T ss_pred EEEEECcchhhc-cCC-ccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHhcCCC-------------
Confidence 999999987532 111 111 11111124444 47899876 55668998864 3333322110000
Q ss_pred CCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3048 193 PDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD 272 (367)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~ 272 (367)
+ .. +. .....+...+.......+++..++..+..+++.+.|+++
T Consensus 233 --~-------------------------------~~--~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 276 (349)
T PRK07908 233 --W-------------------------------PV--GT-LQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV 276 (349)
T ss_pred --C-------------------------------Cc--cH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 00 00 000111111111122345667778888899999999887
Q ss_pred CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EEC--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 273 DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQ--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 273 ~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
|+++..++..+.++++++. ..++.+.|.++|+. +.++ .+. ++.++|+++. +++|+++|+++|++++.
T Consensus 277 -~~~~~~p~~g~~~~~~~~~----~~~~~~~l~~~gI~-v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 277 -GARVVDPAAAPFVLVRVPD----AELLRKRLRERGIA-VRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAEILK 346 (349)
T ss_pred -CcEeccCCCceEEEEECCc----HHHHHHHHHhCCEE-EEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHHHHh
Confidence 8887766677777777753 45777788778854 4443 222 3579999773 57899999999998754
No 211
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.62 E-value=3.8e-14 Score=136.34 Aligned_cols=240 Identities=17% Similarity=0.203 Sum_probs=153.2
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+. ...+...|++++.++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 95 ~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~ 163 (380)
T TIGR01325 95 HVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-----DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAE 163 (380)
T ss_pred EEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-----CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHH
Confidence 355566666553 33455679999988764 7899998886654 48888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||++|+++++|++|+.+....+ .. . .+|+++.+.+|+++++. ..|.+++.+++.++... .+....
T Consensus 164 la~~~gi~livD~a~~~~~~~~p-l~---~---g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~----~~~~~~-- 230 (380)
T TIGR01325 164 LAHAIGALLVVDNVFATPVLQQP-LK---L---GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA----VYLRHT-- 230 (380)
T ss_pred HHHHcCCEEEEECCCcccccCCc-hh---h---CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH----HHHHhh--
Confidence 99999999999999975433221 11 1 35999999999999763 33344443443332211 000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+..+..+..+.+++ +.+.+..++++..+.++++.
T Consensus 231 --------------------------------------------g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la 264 (380)
T TIGR01325 231 --------------------------------------------GPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIA 264 (380)
T ss_pred --------------------------------------------CCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHH
Confidence 00011223333333 45666778889999999999
Q ss_pred HHhcCCCCeEE-eCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhcc--C----c---EEEEEe-----
Q psy3048 267 DLVEKDDRFEL-VCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSH--K----Q---IYIIKA----- 315 (367)
Q Consensus 267 ~~L~~~~g~~~-~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g----~---~~~~~~----- 315 (367)
+.|+++|+++- ..| | ..++++|.+++ .+...++.+.|.-- + . ....|.
T Consensus 265 ~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~ 343 (380)
T TIGR01325 265 EWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD-RAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHG 343 (380)
T ss_pred HHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcc
Confidence 99999988753 332 1 24689999873 34445666665321 1 0 011110
Q ss_pred EE-------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 316 SF-------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 316 ~~-------~~--~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.. .| ++.+|+|+. -||.+.+++.|++.
T Consensus 344 ~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~a 379 (380)
T TIGR01325 344 RMQPEERAAAGIGDGLVRLSVG-----LEDVDDLIADLKRA 379 (380)
T ss_pred cCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHhh
Confidence 00 11 468999774 36788888888765
No 212
>PRK09105 putative aminotransferase; Provisional
Probab=99.62 E-value=9.8e-14 Score=133.11 Aligned_cols=244 Identities=11% Similarity=0.029 Sum_probs=157.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|..+...++..|++++.++.++++.+|++++++. .+.+ .++++++++|+||.+.+.++|.++++
T Consensus 120 d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~------~~v~l~nP~NPTG~~~~~~~l~~l~~ 192 (370)
T PRK09105 120 AGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNA------GLIYICNPNNPTGTVTPRADIEWLLA 192 (370)
T ss_pred CEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCC------CEEEEeCCCCCCCcCcCHHHHHHHHH
Confidence 4566778899999999999999999999887888999999876 2323 47888999999999988888888765
Q ss_pred h--cCcEEEEecccccccccChhhhhhhCCCCCcceeee-cccccccc-CCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 111 E--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAF-NAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 111 ~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~-~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
. +|+++++|++|..+........ +.. ...+++++ +..|.++. +..+|+++.. ++.+...... ...
T Consensus 193 ~~~~~~~lIvDEaY~~f~~~~s~~~--~~~-~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~~l~~~-------~~~ 261 (370)
T PRK09105 193 NKPAGSVLLVDEAYIHFSDAPSVVD--LVA-QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLAKLARF-------GHN 261 (370)
T ss_pred hCCCCcEEEEECchHHhccCcchHH--HHh-hCCCEEEEecccHhhcCCccceeeeecC-HHHHHHHHhc-------CCC
Confidence 3 4899999999953221110011 111 12255554 66788863 3558888863 3333221110 000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l 265 (367)
. .......+++..+. .+.+++..++..+..+++
T Consensus 262 -----~-----------------------------------------~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l 295 (370)
T PRK09105 262 -----P-----------------------------------------LPVPAAAAGLASLRDPKLVPQRRAENAAVREDT 295 (370)
T ss_pred -----C-----------------------------------------cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 0 00112222232222 344566667788888899
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.+.|++. |+++. ++..+.+.++++. ...++.+.|.++|+ .+.......++++|+++. +++++++++++|+
T Consensus 296 ~~~L~~~-g~~~~-~~~~~f~~~~~~~---~~~~l~~~L~~~gI-~v~~~~~~~~~~~Ris~~----~~~~~~~l~~al~ 365 (370)
T PRK09105 296 IAWLKKK-GYKCT-PSQANCFMVDVKR---PAKAVADAMAKQGV-FIGRSWPIWPNWVRVTVG----SEEEMAAFRSAFA 365 (370)
T ss_pred HHHHHHC-CCCcC-CCCCcEEEEeCCC---CHHHHHHHHHHCCc-EEecCCCCCCCeEEEEcC----CHHHHHHHHHHHH
Confidence 9999886 77654 3555555555532 24688888888875 443221122579999764 5788999999998
Q ss_pred HHH
Q psy3048 346 HQS 348 (367)
Q Consensus 346 ~~~ 348 (367)
++.
T Consensus 366 ~~~ 368 (370)
T PRK09105 366 KVM 368 (370)
T ss_pred HHh
Confidence 875
No 213
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=1.6e-13 Score=131.63 Aligned_cols=257 Identities=9% Similarity=-0.016 Sum_probs=163.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++.+.+|..+...+...|++++.++.+.+ .+|++++++++.... +.+++++.++|+||.+-+.+++.+++
T Consensus 108 gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~ 181 (369)
T PRK08153 108 GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFI 181 (369)
T ss_pred CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 456777888999888888889999999998655 478998887764321 24777789999999998888877777
Q ss_pred hh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 110 QE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 110 ~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+. +|+++++|++|+...... .... +.....-.++..+..|.++ .+..+|+++.. ++...........
T Consensus 182 ~~~~~~~~lI~DE~y~~~~~~~-~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~~l~~~~~~------- 251 (369)
T PRK08153 182 EALPETTLLVLDEAYCETAPAG-AAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIKAFDKVRNH------- 251 (369)
T ss_pred HhCCCCcEEEEeCchhhhcCcc-cchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHHHHHHHHhhcC-------
Confidence 64 389999999997543211 1111 0101111356777899997 44667888763 2322211100000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l 265 (367)
+ . ...+...++...+. .+.+++..+...+..+++
T Consensus 252 --------~-------------------------------~------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~ 286 (369)
T PRK08153 252 --------F-------------------------------G------MNRIAQAAALAALKDQAYLAEVVGKIAAARDRI 286 (369)
T ss_pred --------C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 0 0 00122222222222 234566666777888888
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.+.|++. |+.+. |+..+.+.+.+........++.+.|.++|+....++...++.++|+++. +++|+++++++|+
T Consensus 287 ~~~L~~~-g~~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~ 360 (369)
T PRK08153 287 AAIARAN-GLTPL-PSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALP 360 (369)
T ss_pred HHHHHHC-CCccC-CCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHH
Confidence 8888876 66643 4555666666543233467889999988854323433234569999764 5899999999999
Q ss_pred HHHHHhhC
Q psy3048 346 HQSSEMNL 353 (367)
Q Consensus 346 ~~~~~~~~ 353 (367)
++.+.+++
T Consensus 361 ~~~~~~~~ 368 (369)
T PRK08153 361 EALEAARK 368 (369)
T ss_pred HHHHHhhc
Confidence 99876554
No 214
>PRK07337 aminotransferase; Validated
Probab=99.62 E-value=7.5e-14 Score=134.86 Aligned_cols=253 Identities=12% Similarity=0.023 Sum_probs=157.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.+|.+....+...|++++.++.+. ++.+|+++|++++++.+ .+|++++++|+||.+. ++++
T Consensus 114 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~ 187 (388)
T PRK07337 114 GDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERT------RGVLLASPSNPTGTSIAPDELRR 187 (388)
T ss_pred CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccc------eEEEEECCCCCCCcCcCHHHHHH
Confidence 34577778899999888888999999999863 47899999999887655 3777899999999985 4788
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcce-eeeccccccccC-CcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS-FAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~-~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|+++|+++|+++++|++|....+.... .. .... ..++ ++.+.+|.++.| ..+|+++..+ ......... ..+..
T Consensus 188 i~~~a~~~~~~ii~De~y~~~~~~~~~-~~-~~~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~~l~~~-~~~~~ 262 (388)
T PRK07337 188 IVEAVRARGGFTIVDEIYQGLSYDAAP-VS-ALSL-GDDVITINSFSKYFNMTGWRLGWLVVPE-ALVGTFEKL-AQNLF 262 (388)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCC-cC-hhhc-cCCEEEEEechhhcCCchhheeeeecCH-HHHHHHHHH-HHHhc
Confidence 899999999999999998754332110 00 0111 1244 456789998643 5588888743 222211100 00000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---HHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG---LKGLQAYLRKHI 259 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~g~~~~~~~~~ 259 (367)
.. ...+...+++..+. ...+.+..++..
T Consensus 263 ~~-------------------------------------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (388)
T PRK07337 263 IC-------------------------------------------------ASALAQHAALACFEPDTLAIYERRRAEFK 293 (388)
T ss_pred cC-------------------------------------------------CChHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 00 00112222222221 233555566677
Q ss_pred HHHHHHHHHhcCCCCeEEe-CCCCceeEEEEEcCC----chHHHHHHHHHh-ccCcEEEEEe-EEC---CeeEEEEEecC
Q psy3048 260 SLAKKFADLVEKDDRFELV-CPPSMGLVCFRLKGD----NDLTNQLYERLM-SHKQIYIIKA-SFQ---GRPFLRFVVTS 329 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~----~~~~~~l~~~L~-~~g~~~~~~~-~~~---~~~~lRi~~~~ 329 (367)
+..+++.+.|+++ |+.+. .|.....++++++.. .....++.+.+. +.| +.+.++ .+. +.+++|+++..
T Consensus 294 ~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~g-v~v~pg~~f~~~~~~~~~Ri~~~~ 371 (388)
T PRK07337 294 RRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAG-VVLVPGRDFGPHAPRDYIRLSYAT 371 (388)
T ss_pred HHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCCEEEEEecC
Confidence 7888888888886 66543 343445556666421 123457777755 456 444443 222 24699998753
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~ 347 (367)
++++++..++.|.++
T Consensus 372 ---~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 372 ---SMSRLEEAVARLGKL 386 (388)
T ss_pred ---CHHHHHHHHHHHHHH
Confidence 477888888777664
No 215
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.61 E-value=2.6e-13 Score=131.63 Aligned_cols=217 Identities=12% Similarity=0.093 Sum_probs=134.2
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++.+.+ .+|++.++.+++|.+.| +++|.++|++||+++++|++|++.......+.....++ .
T Consensus 176 d~~~le~~i~~~~------~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~-~ 248 (401)
T PRK00854 176 DAEALEAAITPNT------VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGI-E 248 (401)
T ss_pred CHHHHHHHhCCCe------EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCC-C
Confidence 8899999986544 58889999999999976 99999999999999999999975322211111111233 3
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|..+++ |++.+.. .+|+++.++ +... .+. .... .
T Consensus 249 ~D~~~~~--K~l~gg~~~ig~v~~~~-~~~~-~l~-------~~~~-----~---------------------------- 284 (401)
T PRK00854 249 ADVTLIG--KALSGGFYPVSAVLSNS-EVLG-VLK-------PGQH-----G---------------------------- 284 (401)
T ss_pred CCEEEec--ccccCCccCeEEEEEcH-HHHh-ccc-------CCCC-----C----------------------------
Confidence 5777764 9987652 466666643 2222 110 0000 0
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCchHHH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDNDLTN 298 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~ 298 (367)
..+ ++....+....++|+.+.. .+..++.+++++++.+.|+++. ...+. .+...++.+.+.+......
T Consensus 285 ---~t~---~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~ 354 (401)
T PRK00854 285 ---STF---GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGAR 354 (401)
T ss_pred ---CCC---CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHH
Confidence 000 0111222334444544332 2356778888999999998863 22221 1233444444433233456
Q ss_pred HHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 299 QLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 299 ~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
++.+.|.++|+. +.+ .+..++|+++ +..++++||++++++|++++
T Consensus 355 ~~~~~L~~~GV~-v~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 355 QYCEALKERGLL-AKD---THDHTIRLAP-PLVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHHCCeE-Eec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence 889999988843 432 2346899964 56678999999999999875
No 216
>PRK10534 L-threonine aldolase; Provisional
Probab=99.61 E-value=2.8e-14 Score=134.93 Aligned_cols=250 Identities=16% Similarity=0.111 Sum_probs=146.5
Q ss_pred EEEecCCcchhHHHH--HHhC-CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh---H
Q psy3048 32 VAYASDQSNSSVEKS--AIIG-DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE---L 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~--~~~~-g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~---I 105 (367)
.|+++...|.....+ +... +++++.++.++++.+|+++|++++.+...+...+.+|++++++ +|.+.|.++ |
T Consensus 75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i 152 (333)
T PRK10534 75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQA 152 (333)
T ss_pred eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHH
Confidence 345666777544432 2333 3677888877789999999999986532111112467777544 599866655 5
Q ss_pred HHHHhhcCcEEEEeccccccccc--ChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALL--LPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
.++|++||+++++|+||..+... ....... ....|.++.+.+|.++.+ .|+.++.+++.++........+
T Consensus 153 ~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~---~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~--- 224 (333)
T PRK10534 153 WEFTRERNLALHVDGARIFNAVVAYGCELKEI---TQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMT--- 224 (333)
T ss_pred HHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHH---HhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHh---
Confidence 67899999999999997522110 0011110 112366667899987765 5644444554443221100000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. ..+ ...++.+.+++..+ +...+.+++..+.++
T Consensus 225 ~--------~~~-------------------------------------~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~ 257 (333)
T PRK10534 225 G--------GGM-------------------------------------RQAGILAAAGLYAL--KHNVARLQEDHDNAA 257 (333)
T ss_pred C--------Cch-------------------------------------hhHHHHHHHHHHHH--HhhHHHHHHHHHHHH
Confidence 0 000 00011112222222 111344445556678
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
++.+.|+++ |+++.. +..+.+.+++++ ....++.+.|.++|+. +.+. ..+|++. +...+++++++++++
T Consensus 258 ~l~~~L~~~-g~~~~~-~~~nfv~~~~~~--~~~~~~~~~l~~~gi~-v~~~-----~~~rl~~-~~r~t~e~~~~~~~~ 326 (333)
T PRK10534 258 WLAEQLREA-GADVMR-QDTNMLFVRVGE--EQAAALGEYMRERNVL-INAS-----PIVRLVT-HLDVSREQLAEVVAH 326 (333)
T ss_pred HHHHHHHhC-CCccCC-CCceEEEEECCc--hhHHHHHHHHHHcCee-ecCC-----ceEEEEE-EeCCCHHHHHHHHHH
Confidence 999999987 887654 467888887753 2356788888888854 4322 2579865 456789999999999
Q ss_pred HHHHHH
Q psy3048 344 ISHQSS 349 (367)
Q Consensus 344 l~~~~~ 349 (367)
|++++.
T Consensus 327 l~~~~~ 332 (333)
T PRK10534 327 WRAFLA 332 (333)
T ss_pred HHHHhc
Confidence 987653
No 217
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=1.6e-13 Score=132.99 Aligned_cols=219 Identities=13% Similarity=0.039 Sum_probs=138.3
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++.+. +.+|++..+.+++|.+.| +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 172 d~~~l~~~~~~~------~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~ 244 (398)
T PRK03244 172 DVDALAAAVDDD------TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-T 244 (398)
T ss_pred CHHHHHHhhcCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCC-C
Confidence 789999888533 357777888899999977 89999999999999999999976433221111112233 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ .|+++++..+|+++.+++ .. ..+. .... ...|
T Consensus 245 pDi~t~--sK~l~~G~~ig~~~~~~~-~~-~~~~-------~~~~-----~~t~-------------------------- 282 (398)
T PRK03244 245 PDVVTL--AKGLGGGLPIGACLAFGP-AA-DLLT-------PGLH-----GSTF-------------------------- 282 (398)
T ss_pred CCEEEE--chhhhCCcccEEEEEcHH-HH-hhcc-------CCCC-----cCCC--------------------------
Confidence 477655 599997777898888543 22 2111 0000 0000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCchHHHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDNDLTNQ 299 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~~ 299 (367)
.+....+.+..++|+.+.. ++..++..++.+++++.|+++ ++.++. .....++.+.++. ....+
T Consensus 283 --------~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~--~~~~~ 348 (398)
T PRK03244 283 --------GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTA--PVAKA 348 (398)
T ss_pred --------CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEec--cHHHH
Confidence 0111122333344443333 245567788899999999885 332221 1233455566643 24568
Q ss_pred HHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 300 LYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 300 l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+.+++.++|.+ +.+ .+..++|+++ +...+++||+++++.|+++++++.
T Consensus 349 ~~~~l~~~Gv~-~~~---~~~~~iR~~p-~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 349 VEAAAREAGFL-VNA---VAPDVIRLAP-PLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHHHCCeE-Eee---cCCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhcc
Confidence 88999999854 433 2346899975 455789999999999999987643
No 218
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.61 E-value=1.5e-13 Score=129.90 Aligned_cols=243 Identities=12% Similarity=0.059 Sum_probs=154.1
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~ 107 (367)
-+|+. +.++......++..|++++.|+.++ ..+|++.+++ .. +.+|++++++||||.+-+ +++|++
T Consensus 81 ~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~---~~------~k~v~l~nP~NPTG~~~s~~~~~~l~~ 149 (332)
T PRK06425 81 NIIIV-EPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN---YN------FDLIFIVSPDNPLGNLISRDSLLTISE 149 (332)
T ss_pred cEEEe-CCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh---cC------CCEEEEeCCCCCcCCccCHHHHHHHHH
Confidence 34444 6889999999999999999999864 4456555542 12 347778899999999855 677777
Q ss_pred HHhhcCcEEEEecccccccccC-hhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|+++|+++++|++++-+.... +......... .--++..+..|.++ ....+|+++.. ++..+.......+
T Consensus 150 ~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~------ 221 (332)
T PRK06425 150 ICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY-GNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEP------ 221 (332)
T ss_pred HHHHcCCEEEEecchhccccccchhHHHHhccC-CCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCC------
Confidence 8899999999999987654321 1111111111 11356667899998 55778888874 3333221110000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKK 264 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~ 264 (367)
+ .. .... ..++.....+. +++..+...+..++
T Consensus 222 ---------~-------------------------------~~------~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~ 254 (332)
T PRK06425 222 ---------W-------------------------------SV------CDPA-IDFIRSIDLDYVAKHSLDIMENERSY 254 (332)
T ss_pred ---------C-------------------------------cc------CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 0 00 0011 11122211122 34556677788888
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.+.|+++ |+++..++..+.+.++++ ...++.+.|.++|+.......+. +.+++|+++. +.++.++|++
T Consensus 255 l~~~L~~~-g~~~~~~~~g~f~~~~~~----~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~ 325 (332)
T PRK06425 255 LINNLEAM-GFRAAGDPSANFITFMIP----DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVN 325 (332)
T ss_pred HHHHHHHC-CCEECCCCCceEEEEEcC----CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHH
Confidence 99999887 787765566666777664 25688889888885433333322 2469999764 5789999999
Q ss_pred HHHHHH
Q psy3048 343 EISHQS 348 (367)
Q Consensus 343 ~l~~~~ 348 (367)
+|++++
T Consensus 326 al~~~~ 331 (332)
T PRK06425 326 ALRNFL 331 (332)
T ss_pred HHHHHh
Confidence 998764
No 219
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.61 E-value=3.1e-13 Score=132.46 Aligned_cols=267 Identities=15% Similarity=0.105 Sum_probs=165.0
Q ss_pred eEEEecCCcchhHHHHHH-hCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 31 LVAYASDQSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~-~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
-.|+++...+..+...+. ..|++++.|+++ +++.+|++++++++++..+++..+.++++++|+||+|.+-+ +++
T Consensus 145 D~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~ 224 (447)
T PLN02607 145 DALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED 224 (447)
T ss_pred CEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHH
Confidence 356667778888777666 478999999886 34679999999999876666656678888999999999855 788
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhh---hC-----C-CCCcceeeeccccccc-cCCcceeEEEecchhhhhhc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHL---KR-----G-LEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTF 174 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~---~~-----~-~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~ 174 (367)
|.++|++||+++++|++|+...+..+.+... .. + -+++ .++.+..|-++ .+..+|+++..++......
T Consensus 225 l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~- 302 (447)
T PLN02607 225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA- 302 (447)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHHHHH-
Confidence 8899999999999999997654422111111 10 1 1122 45678899987 4477888887543322211
Q ss_pred cCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH--hhHHHHH
Q psy3048 175 FTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS--YGLKGLQ 252 (367)
Q Consensus 175 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~g~~ 252 (367)
.....|-.. +. .....+...|.. +...-++
T Consensus 303 ~~~~~~~~~-----------------------------------------------s~-~~q~~~~~~L~d~~~~~~~l~ 334 (447)
T PLN02607 303 RRMSSFTLV-----------------------------------------------SS-QTQHLLASMLSDEEFTENYIR 334 (447)
T ss_pred HHHhhcCCC-----------------------------------------------CH-HHHHHHHHHhCCchhHHHHHH
Confidence 000000000 00 000111111111 1112344
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-----chHHHHHHHHHhcc-CcEEEEEeEE---CCeeEE
Q psy3048 253 AYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-----NDLTNQLYERLMSH-KQIYIIKASF---QGRPFL 323 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-----~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~l 323 (367)
+..++..+..+.+.+.|++. |+.+..+.....++++++.. .....++.++|.++ | +.+.|+.. ..++++
T Consensus 335 ~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~g-V~v~pG~~f~~~~~g~f 412 (447)
T PLN02607 335 TNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVK-LNISPGSSCHCSEPGWF 412 (447)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCC-EEEcCccccCCCCCCEE
Confidence 55556667777788888876 77654443344555665421 01123677777764 6 45555433 236899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
|+++.. .++++++..+++|.+++++-
T Consensus 413 Ri~fa~--~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 413 RVCFAN--MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred EEEecc--CCHHHHHHHHHHHHHHHHHH
Confidence 997753 35889999999999987753
No 220
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.61 E-value=9.1e-14 Score=134.70 Aligned_cols=267 Identities=15% Similarity=0.089 Sum_probs=162.1
Q ss_pred ecCCcchhHHHHHHhCCcceEEEecCC----------CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-cccC---
Q psy3048 35 ASDQSNSSVEKSAIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAFD--- 100 (367)
Q Consensus 35 ~s~~~H~s~~~~~~~~g~~v~~v~~~~----------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i~--- 100 (367)
++...+.+....+...|++++.++++. .|.+|+++|++++.+.+. ..+.+|+++.++|++ |.+.
T Consensus 96 ~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~ 173 (431)
T cd00617 96 PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMA 173 (431)
T ss_pred ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHH
Confidence 344344455667788999999999862 255999999999986521 113478888888987 8875
Q ss_pred ChhhHHHHHhhcCcEEEEecccccccc-c---------Chhhhhhh-CCCCCcceeeeccccccccCCcceeEEEecchh
Q psy3048 101 NLEELGPICQEYNIWLHVDAAYAGSAL-L---------LPEYAHLK-RGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANH 169 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~a~~~~~~-~---------~~~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~ 169 (367)
++++|.++|++||++++.|+|+..... + ........ .-.+.+|.++++++|-+.+|. .|+++.++++.
T Consensus 174 ~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l 252 (431)
T cd00617 174 NLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDEL 252 (431)
T ss_pred HHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHH
Confidence 556889999999999999999764311 1 11111000 012467999999999988775 45666665545
Q ss_pred hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHH-HHHHHHHHhhH
Q psy3048 170 LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRAL-KLWMTLRSYGL 248 (367)
Q Consensus 170 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ 248 (367)
+++..+.. +...+ ...| ++...... ++..+|.....
T Consensus 253 ~~~~~~~~--~~~~~-------~~~~----------------------------------gG~~~r~~~A~A~gL~e~~~ 289 (431)
T cd00617 253 YEEARQRV--VLYEG-------FVTY----------------------------------GGMAGRDMEALAQGLREAVE 289 (431)
T ss_pred HHHHHHhc--cccCC-------cccc----------------------------------ccccHHHHHHHHHHHHhccc
Confidence 54432110 00000 0000 00001111 11113322111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-------chHHHHHHHHHhccCcEE-EEEeE----
Q psy3048 249 KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-------NDLTNQLYERLMSHKQIY-IIKAS---- 316 (367)
Q Consensus 249 ~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-------~~~~~~l~~~L~~~g~~~-~~~~~---- 316 (367)
.+..++..+.++++.+.|++. |+.+..|...+.+.+.+... .-...+++..|.++..+. +.-+.
T Consensus 290 ---~~~l~~~~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~ 365 (431)
T cd00617 290 ---EDYLRHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAG 365 (431)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecc
Confidence 234455566779999999987 88887777777777765421 012457776666555333 32111
Q ss_pred --EC-------CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 --FQ-------GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 --~~-------~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.. ....+|+++...--|.+++|.++++|..+.++-
T Consensus 366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhH
Confidence 01 136899988665567999999999999998863
No 221
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.61 E-value=1.1e-13 Score=139.80 Aligned_cols=137 Identities=16% Similarity=0.113 Sum_probs=103.7
Q ss_pred CceEEEecCCcchhHHHH-HHhCCcceEEEecCC-----CCCcCHHH-----HHHHHHHH-hh--CCCcc-EEEEEecCC
Q psy3048 29 SRLVAYASDQSNSSVEKS-AIIGDVPVRQLRSDD-----NGVLRGDA-----LLTAVKED-LA--KGLIP-CCLVATLGT 93 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~-~~~~g~~v~~v~~~~-----~~~~d~~~-----L~~~l~~~-~~--~~~~~-~~vv~~~~~ 93 (367)
+.-.|++++++|.|+..+ +.+.|+.++++.+.. -+.++++. +++++++. .+ +...| .+++++++
T Consensus 213 ~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p- 291 (720)
T PRK13578 213 PGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG- 291 (720)
T ss_pred CCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-
Confidence 345788899999999996 788999999998752 24566555 89998876 21 12344 56777765
Q ss_pred CcccccCChhhHHHH-HhhcCcEEEEecccccccccChhhhhhh-CCC-CCcc----eeeeccccccccCCcceeEEEec
Q psy3048 94 TGTCAFDNLEELGPI-CQEYNIWLHVDAAYAGSALLLPEYAHLK-RGL-EYVD----SFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 94 t~~G~i~dl~~I~~l-~~~~gi~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~D----~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
|+.|.+.|+++|.++ ||.++ +++||+|||+..-+.+.++..- ..+ ..+| +++-|.||.+.+-.+++++.+++
T Consensus 292 TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~ 370 (720)
T PRK13578 292 TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKD 370 (720)
T ss_pred CCcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCC
Confidence 889999999999998 78888 9999999999877665322110 111 2468 99999999999999999999865
Q ss_pred c
Q psy3048 167 A 167 (367)
Q Consensus 167 ~ 167 (367)
.
T Consensus 371 ~ 371 (720)
T PRK13578 371 N 371 (720)
T ss_pred c
Confidence 3
No 222
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=2.2e-13 Score=137.44 Aligned_cols=265 Identities=16% Similarity=0.132 Sum_probs=168.8
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC-----CCCcCH-----HHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-----NGVLRG-----DALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-----~~~~d~-----~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
+.-.|++++++|.|+..++.+.|+.++++++.. -+.+++ +.+++++++..+. .+|..++++++ |+.|.
T Consensus 234 ~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi 311 (713)
T PRK15399 234 AGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGL 311 (713)
T ss_pred CCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCce
Confidence 445788899999999999999999999998742 245666 9999999876532 45667777776 88999
Q ss_pred cCChhhHHHHHhhcCcEE-EEecccccccccChhhhh--hhCCCCCccee---eeccccccccCCcceeEEEecchhhhh
Q psy3048 99 FDNLEELGPICQEYNIWL-HVDAAYAGSALLLPEYAH--LKRGLEYVDSF---AFNAHKWLLTNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l-~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~---~~~~hK~l~~p~g~g~l~~~~~~~~~~ 172 (367)
+.|+++|.++| |+.+ |||+|||+...+.+.++. .+.+...+|.. +-|.||.+.+-.+++++.++..-.. .
T Consensus 312 ~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~-~ 387 (713)
T PRK15399 312 LYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDE-E 387 (713)
T ss_pred eeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCH-H
Confidence 99999999999 6766 799999998766654331 12121134666 9999999999999999999653111 1
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHH
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQ 252 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 252 (367)
.+ ...|.... +++++|.++ .++-.+.+.+....-+
T Consensus 388 ~~--n~a~~m~~-----STSPsY~Lm--------------------------------------ASLD~a~~~m~~~~G~ 422 (713)
T PRK15399 388 TF--NEAFMMHT-----STSPSYPIV--------------------------------------ASVETAAAMLRGNPGK 422 (713)
T ss_pred HH--HHHHHHHc-----CCCcHHHHH--------------------------------------HHHHHHHHHHHhhhhH
Confidence 11 11111111 234444111 1222222233221235
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC------eEEeCCC-----------------------------CceeEEEEEcCC----
Q psy3048 253 AYLRKHISLAKKFADLVEKDDR------FELVCPP-----------------------------SMGLVCFRLKGD---- 293 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g------~~~~~~~-----------------------------~~~~v~f~~~~~---- 293 (367)
+.+++..+++..++++|.++.+ |+++.++ ...-+++.+++.
T Consensus 423 ~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g 502 (713)
T PRK15399 423 RLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQG 502 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCccccc
Confidence 5677888888889998887766 5665421 112233333321
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
......+.+.|.+.|+ .+..+. ...+=+ +.++..+++++++++++|.++-+
T Consensus 503 ~~~~~Gi~g~~l~~~L~e~gI-~~E~~d---~~~vL~-l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 503 NMSEEGIPAALVAKFLDERGI-VVEKTG---PYNLLF-LFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred ccccCCCCHHHHHHHHHHcCC-EEEecC---CCeEEE-EeCCCCCHHHHHHHHHHHHHHHH
Confidence 1223467777777774 443322 222323 34678899999999999998854
No 223
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.61 E-value=3.1e-13 Score=130.90 Aligned_cols=265 Identities=12% Similarity=0.089 Sum_probs=156.5
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDA 69 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~ 69 (367)
.||++||.+........ + .++.+|..+..-|-....++...+.. +..++.+ |+++
T Consensus 112 ~Alk~a~~~~~~~~g~~-~-------~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~ 178 (396)
T PRK04073 112 TAIKAARRWAYDVKGVE-P-------NKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEA 178 (396)
T ss_pred HHHHHHHHHhhhccCCC-C-------CCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHH
Confidence 47888888754331100 0 12345555566776666665544321 2333332 7899
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCccee
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSF 145 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 145 (367)
|++++++.+ .+|+++.+++++|.+.| +++|.++|++||+++++|++|.+.......+.....++ ..|++
T Consensus 179 l~~~i~~~~------~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~ 251 (396)
T PRK04073 179 LKAAITPNT------AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMY 251 (396)
T ss_pred HHHhcccCe------EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEE
Confidence 999886544 47888888899999865 89999999999999999999986433221111111222 35777
Q ss_pred eeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccc
Q psy3048 146 AFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQ 224 (367)
Q Consensus 146 ~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (367)
++ .|.++.+ ..+|+++.++ +... .+. .... ...|
T Consensus 252 ~~--sK~lg~gg~~ig~~~~~~-~i~~-~~~-------~~~~-----~~t~----------------------------- 286 (396)
T PRK04073 252 IL--GKALGGGVFPISCVAANR-DILG-VFT-------PGSH-----GSTF----------------------------- 286 (396)
T ss_pred Ee--cccccCCCCcceEEEEcH-HHHh-hhc-------CCCC-----CCCC-----------------------------
Confidence 65 5888765 4577777643 2222 111 0000 0000
Q ss_pred cccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCchHHHHHHH
Q psy3048 225 HWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDNDLTNQLYE 302 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~~l~~ 302 (367)
.+......+..++|+.+..+ .+.++..++.+++.+.|+++ +...+. ++...++.+.+.. ...++.+
T Consensus 287 -----~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~---~~~~~~~ 354 (396)
T PRK04073 287 -----GGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNE---PARPYCE 354 (396)
T ss_pred -----CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEecc---hHHHHHH
Confidence 01111223333445443333 34466778899999999876 222122 1233445555542 2567888
Q ss_pred HHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 303 RLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 303 ~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
+|.++|.+ +.+ .+..++|+++ +...+++|+++++++|++++
T Consensus 355 ~l~~~Gv~-~~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 355 ALKEEGLL-CKE---THETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHHCCeE-Eec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 89888854 432 2346899975 56778999999999998864
No 224
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.60 E-value=2.5e-13 Score=131.82 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=163.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhC-CCccEEEEEecCCCccccc---CChh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAK-GLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~-~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
.-.|++.+.++..+...+...|++++.|+.+ +++.+|+++|.+.+++..++ .....++++++|+||||.+ +.++
T Consensus 119 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~ 198 (403)
T PRK08636 119 GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYE 198 (403)
T ss_pred CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHH
Confidence 3466677888888888889999999999874 45789998775555443322 1224688888899999998 4568
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC---Ccceeeeccccccc-cCCcceeEEEecchhhhhhccCCcc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE---YVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~---~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+|+++|++|++++++|.+|+-..+....... +..+. ...+.+.+..|.++ ....+|+++.. ++.+..... ...
T Consensus 199 ~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~-~~li~~~~~-~~~ 275 (403)
T PRK08636 199 RLVALAKKERFYIISDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN-KKLVGALKK-IKS 275 (403)
T ss_pred HHHHHHHHcCcEEEEeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeeeCC-HHHHHHHHH-HHH
Confidence 8888999999999999999765432111110 11111 11244678999995 55788887753 332221100 000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+.... ........+..+++. ....+++..+...
T Consensus 276 ~~~~~----------------------------------------------~~~~~q~~~~~~~~~-~~~~~~~~~~~~~ 308 (403)
T PRK08636 276 WLDYG----------------------------------------------MFTPIQVAATIALDG-DQSCVEEIRETYR 308 (403)
T ss_pred Hhccc----------------------------------------------CChHHHHHHHHHHhC-cHHHHHHHHHHHH
Confidence 00000 000001111122221 2344666666777
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC--chHHHHHHHHHh-ccCcEEEEEeE-E--CCeeEEEEEecCCCCC
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD--NDLTNQLYERLM-SHKQIYIIKAS-F--QGRPFLRFVVTSPETN 333 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--~~~~~~l~~~L~-~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~ 333 (367)
+..+++.+.|++. |+.+..+.....+++++++. .....++.+++. +.| +.+.++. + .+..++||++. .+
T Consensus 309 ~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~g-V~v~pg~~f~~~~~~~iRi~~~---~~ 383 (403)
T PRK08636 309 KRRDVLIESFANA-GWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAK-VAVSPGIGFGEYGDEYVRIALI---EN 383 (403)
T ss_pred HHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCC-EEEecchhhCcCCCCeEEEEec---CC
Confidence 8888888888886 67665555556667776531 112457777755 456 4454442 2 23579999874 36
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQSSE 350 (367)
Q Consensus 334 ~edid~li~~l~~~~~~ 350 (367)
+++++..++.|++++++
T Consensus 384 ~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 384 ENRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999988875
No 225
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.60 E-value=1.5e-13 Score=130.99 Aligned_cols=262 Identities=13% Similarity=0.117 Sum_probs=139.3
Q ss_pred ceEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++..|......++. .|++++.+++++++..| ++++ ..|++++|++ .|.++|+++|
T Consensus 154 ~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~------a~v~vq~Pn~-~G~~ed~~~i 218 (429)
T PF02347_consen 154 RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDT------AAVMVQNPNT-FGVFEDIKEI 218 (429)
T ss_dssp --EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTE------EEEEEESS-T-TSB--THHHH
T ss_pred CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCe------EEEEeecCCC-CceEeeHHHH
Confidence 44688899999998876553 68899999988777777 3333 5788888855 8999999999
Q ss_pred HHHHhhcCcEEEEecccccccc-cChhhhhhhCCCCCcceeeeccccccccC-----CcceeEEEecchhhhhhccCCcc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSAL-LLPEYAHLKRGLEYVDSFAFNAHKWLLTN-----HDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~-~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
++++|++|..+++ ++--.... ..++.. .| +|++ ++.||-|+.| |++|++.+++. +.+.+ ..+
T Consensus 219 ~~~~h~~gal~~~-~ad~~aL~~l~~Pge---~G---ADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~l--PGR 286 (429)
T PF02347_consen 219 ADIAHAAGALVIV-GADPNALGGLKSPGE---YG---ADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVRQL--PGR 286 (429)
T ss_dssp HHHHHHTT-EEEE-CGGCCGCCTC--GGG---GT----SEE-EECCTTTT---CCC-S--EEEEE-GG--GGGGS---S-
T ss_pred HHHHHHcCCEEEE-ecCHHHHhCcCChhh---cC---ccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhhhC--CCc
Confidence 9999999999988 65432211 112212 13 4998 5558887766 45677777654 32221 112
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcc---cccccccccc-ccHHHHHHHHHHhhHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVI---QHWQTPLSRR-FRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
.++..... .....|.+. +.... +++ +.....|++. ..++..+..+..+|.+|+.++.
T Consensus 287 iVG~t~D~--~G~~~~~lt-------------LqtRE----QHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA 347 (429)
T PF02347_consen 287 IVGQTKDA--DGKRAFVLT-------------LQTRE----QHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIA 347 (429)
T ss_dssp EEEEEEBC--CCSCCEEEE--------------GGGT----CHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccc--cccceeeec-------------ccccc----ccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 22111000 112222111 00000 011 1112223332 2345666778889999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
++...+++|+.++|+++.++. +..+.+......... .....++.++.+..| +.. .. .....+-+++ .-.++++
T Consensus 348 ~~~~~~A~yl~~~L~~~~~~~-~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~g-l~~--~~-~~~~~~li~~-TE~~t~e 420 (429)
T PF02347_consen 348 ERIHLNAHYLAERLKKIYGLP-FDNPFFFEFVVVFSK-DKEVEELLKRGIEGG-LNL--RY-PDDGALLICV-TETRTKE 420 (429)
T ss_dssp HHHHHHHHHHHHHHCCTTBEC-SSSSSBSSEEEEESS--HHHHHHHHTT-----EEE--GG-G-SSEEEEE---TT--HH
T ss_pred HHHHHHHHHHHHHHHHhcCcc-cCCCCceeeeeecCC-cHHHHHHHHHHHhcC-CCc--cc-cCCCeEEEEc-cCCCCHH
Confidence 999999999999999984443 333344433333333 223334666666666 222 11 1223666766 4566799
Q ss_pred HHHHHHHHH
Q psy3048 336 DVAFAWNEI 344 (367)
Q Consensus 336 did~li~~l 344 (367)
|||+++++|
T Consensus 421 did~lv~~f 429 (429)
T PF02347_consen 421 DIDRLVEAF 429 (429)
T ss_dssp HHHHHHH--
T ss_pred HHHHHHhcC
Confidence 999999875
No 226
>PRK07683 aminotransferase A; Validated
Probab=99.59 E-value=2.7e-13 Score=130.92 Aligned_cols=260 Identities=10% Similarity=0.051 Sum_probs=159.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
.-.|+++...+..+...++..|++++.++.+ +++.+|++++++.+.+.+ .++++++++|+||.+- ++++|
T Consensus 113 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~~s~~~~~~l 186 (387)
T PRK07683 113 GTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKT------RCVVLPYPSNPTGVTLSKEELQDI 186 (387)
T ss_pred CCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcCCCHHHHHHH
Confidence 3457777778777888888899999999986 457789999999886544 4778899999999984 58999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+++|+++|+++++|++|+...+..+... ....+...-.++..+..|.++.| ..+|+++... ...+..... ..+...
T Consensus 187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~-~l~~~~~~~-~~~~~~ 264 (387)
T PRK07683 187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS-YLAKHILKV-HQYNVT 264 (387)
T ss_pred HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH-HHHHHHHHH-HHhccC
Confidence 9999999999999999986543221100 00111111246778889999844 5678877643 222221100 011000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+...+....+...+.. +...+++..++..+..+
T Consensus 265 ----------------------------------------------~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07683 265 ----------------------------------------------CASSISQYAALEALTA-GKDDAKMMRHQYKKRRD 297 (387)
T ss_pred ----------------------------------------------CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHH
Confidence 0000111111222221 23345566667778888
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEE-EEcCCchHHHHHHHHH-hccCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCF-RLKGDNDLTNQLYERL-MSHKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~~~~~~l~~~L-~~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|++. |+.+. ++..+.+.+ .++.......++.+.+ .++|+ .+.++. + .+..++||+++. +++++.
T Consensus 298 ~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI-~v~pg~~f~~~~~~~~Ri~~~~---~~~~~~ 371 (387)
T PRK07683 298 YVYNRLISM-GLDVE-KPTGAFYLFPSIGHFTMSSFDFALDLVEEAGL-AVVPGSAFSEYGEGYVRLSYAY---SIETLK 371 (387)
T ss_pred HHHHHHHHc-CCccc-CCCeeEEEEEecccCCCCHHHHHHHHHHhCCE-EEcCchhhCCCCCCeEEEEecC---CHHHHH
Confidence 888888876 66644 343343333 3332112244566554 55664 444432 2 235799997753 588899
Q ss_pred HHHHHHHHHHHH
Q psy3048 339 FAWNEISHQSSE 350 (367)
Q Consensus 339 ~li~~l~~~~~~ 350 (367)
..++.|.+++++
T Consensus 372 ~al~~l~~~l~~ 383 (387)
T PRK07683 372 EGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHHHHHh
Confidence 999988887653
No 227
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.59 E-value=1.3e-13 Score=133.45 Aligned_cols=253 Identities=12% Similarity=0.054 Sum_probs=155.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++.+..+..+...++..|++++.||+++ ++.+|+++|++++.+.+ .+++++.++||||.+- .+++
T Consensus 117 gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~~~s~~~~~~ 190 (396)
T PRK09147 117 GPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNPTGAVLPLDDWKK 190 (396)
T ss_pred CCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCCcCccCCHHHHHH
Confidence 34567778888888888889999999999863 46899999998886544 4777889999999984 7788
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhhh--hC--CCCCc--ceeeecccccc-ccCCcceeEEEecchhhhhhcc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAHL--KR--GLEYV--DSFAFNAHKWL-LTNHDCSAMWVKNANHLTNTFF 175 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~--~~--~~~~~--D~~~~~~hK~l-~~p~g~g~l~~~~~~~~~~~~~ 175 (367)
|+++|++||+++++|++|+-..+... ..... .. +.... -++..+..|.+ .....+|+++.. +..++....
T Consensus 191 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~~l~~~~~~ 269 (396)
T PRK09147 191 LFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-AALLKKFLL 269 (396)
T ss_pred HHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-HHHHHHHHH
Confidence 88899999999999999976544221 00000 00 00001 26778889965 444778887763 232322110
Q ss_pred CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHH
Q psy3048 176 TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAY 254 (367)
Q Consensus 176 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~ 254 (367)
...+... . ...+...+++..+ ..+.+.+.
T Consensus 270 -~~~~~~~-------------------------------------------~------~~~~~q~a~~~~~~~~~~~~~~ 299 (396)
T PRK09147 270 -YRTYHGC-------------------------------------------A------MPPAVQAASIAAWNDEAHVREN 299 (396)
T ss_pred -Hhhhccc-------------------------------------------C------CCHHHHHHHHHHhcchhHHHHH
Confidence 0000000 0 0011112212222 22345555
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-E--------CCeeEEE
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-F--------QGRPFLR 324 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~--------~~~~~lR 324 (367)
.+..++..+.+.+.|++. +.+..|+....++++++. ...++.++|. +.|+ .+.++. + .+..++|
T Consensus 300 ~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gv-~v~pg~~f~~~~~~~~~~~~~iR 373 (396)
T PRK09147 300 RALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPG---DDTEFARRLYADYNV-TVLPGSYLAREAHGVNPGAGRVR 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCC---CHHHHHHHHHHhCCE-EEeCCccccccccCCCCCCCeEE
Confidence 666667777777777663 343344455566666652 2467777776 4564 444432 2 1256999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~ 348 (367)
++++. ++++++.++++|++++
T Consensus 374 i~~~~---~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 374 IALVA---PLAECVEAAERIVDFC 394 (396)
T ss_pred EEecC---CHHHHHHHHHHHHHHh
Confidence 98753 4778888888888765
No 228
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.59 E-value=1.4e-13 Score=132.90 Aligned_cols=255 Identities=13% Similarity=0.048 Sum_probs=159.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|++.+.++......++..|++++.++.++ ++.+|++++++.+.+.+ .+++++.++||||.+ +.+++|
T Consensus 117 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPTG~~~s~~~~~~l 190 (388)
T PRK07366 117 DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQA------RLMVLSYPHNPTTAIAPLSFFQEA 190 (388)
T ss_pred CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccc------eEEEEeCCCCCCCccCCHHHHHHH
Confidence 3566677888888888899999999999863 36788899988775443 477888899999998 456677
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCC--C-cceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE--Y-VDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~--~-~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
+++|++||+++++|++|+-..+........+.... . .-+++.+..|.++ ....+|+++.. ++.+....... ...
T Consensus 191 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~li~~l~~~~-~~~ 268 (388)
T PRK07366 191 VAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN-AQLIQALRQVK-AVV 268 (388)
T ss_pred HHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC-HHHHHHHHHHH-hhc
Confidence 88999999999999999765432111000011111 1 1256678999995 55778888753 33332211000 000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLRKHI 259 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~~~~ 259 (367)
. + + . . ...+.+++..+ ..+.+++..++..
T Consensus 269 ~------------~-------------------------------~---~--~-~~~~~~a~~~l~~~~~~l~~~~~~~~ 299 (388)
T PRK07366 269 D------------F-------------------------------N---Q--Y-RGILNGAIAALTGPQATVQQTVQIFR 299 (388)
T ss_pred c------------c-------------------------------C---C--C-HHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 0 0 0 0 0 00111122222 2345677777788
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-chHHHHHHHHHh-ccCcEEEEEeE-EC--CeeEEEEEecCCCCCH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-NDLTNQLYERLM-SHKQIYIIKAS-FQ--GRPFLRFVVTSPETNQ 334 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~-~~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~ 334 (367)
+..+++.+.|+++ |+....|.....+++++++. .....++.+.+. +.|+ .+.++. +. +.+++|++++. ++
T Consensus 300 ~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv-~v~pg~~f~~~~~~~iRi~~~~---~~ 374 (388)
T PRK07366 300 QRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGV-AASPGSGFGKSGEGYVRFALVH---DP 374 (388)
T ss_pred HHHHHHHHHHHHC-CCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCE-EEeCchHhCcCCCCeEEEEecC---CH
Confidence 8888899999887 67654455555666666531 112457777775 4564 444432 22 24699998753 58
Q ss_pred HHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQ 347 (367)
Q Consensus 335 edid~li~~l~~~ 347 (367)
++++..++.|.++
T Consensus 375 ~~l~~~l~rl~~~ 387 (388)
T PRK07366 375 DILEEAVERIAAF 387 (388)
T ss_pred HHHHHHHHHHHHh
Confidence 8899999888765
No 229
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.59 E-value=1.8e-12 Score=125.80 Aligned_cols=253 Identities=13% Similarity=0.081 Sum_probs=149.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.+|..+...|-+...++...+.. +..++. .|+++|+++++.. .+.+|++..+.+++|
T Consensus 123 ~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-----~~~~v~~ep~~~~~G 192 (400)
T PTZ00125 123 AKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQDP-----NVAAFIVEPIQGEAG 192 (400)
T ss_pred CeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCCC-----CeEEEEEcCccCCCC
Confidence 456666777777766665543321 122222 3899999998611 135777777888999
Q ss_pred ccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhh
Q psy3048 98 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTN 172 (367)
Q Consensus 98 ~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~ 172 (367)
.+.| +++|.++|++||+++++|++|++.......+.....++ ..|+++++ |++.++. .+|+++.++ +....
T Consensus 193 ~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~-~~~~~ 268 (400)
T PTZ00125 193 VIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLAND-DVMLV 268 (400)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcH-HHHhh
Confidence 9887 99999999999999999999975332211111111233 34777764 9998764 788888754 22221
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHH
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQ 252 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 252 (367)
+.. .. .. . .+ .+..+.+....++++.+..+++
T Consensus 269 -~~~---~~-~~-~-------t~----------------------------------~~~~~~~~aa~~~l~~i~~~~~- 300 (400)
T PTZ00125 269 -IKP---GE-HG-S-------TY----------------------------------GGNPLACAVAVEALEVLKEEKL- 300 (400)
T ss_pred -ccC---CC-CC-C-------CC----------------------------------CcCHHHHHHHHHHHHHHHhcCH-
Confidence 100 00 00 0 00 0111122333444555443343
Q ss_pred HHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcC-CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEe
Q psy3048 253 AYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKG-DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVV 327 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~-~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~ 327 (367)
.++..++.+++++.|+++ +.+... .+...++.+.++. ......++.+.|.++|+ ++.+. +..++|+++
T Consensus 301 --~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv-~v~~~---~~~~lRi~~ 373 (400)
T PTZ00125 301 --AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSDGVNAWDLCLKLKENGL-LAKPT---HDNIIRFAP 373 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCcchHHHHHHHHHHHCCe-EEeec---CCCEEEEEC
Confidence 345556677777777553 222212 1223344444542 12345678888988884 44432 446899965
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 328 TSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 328 ~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+...+++|++++++.|+++++++.
T Consensus 374 -~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 374 -PLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred -CccCCHHHHHHHHHHHHHHHHHHh
Confidence 456789999999999999988764
No 230
>PRK06460 hypothetical protein; Provisional
Probab=99.58 E-value=2.8e-13 Score=130.02 Aligned_cols=234 Identities=18% Similarity=0.159 Sum_probs=146.9
Q ss_pred hHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 42 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 42 s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.+...++..|++++.++.+ +.+.+++.+++.+ .+|++++++|++|.+.|+++|.++||++|+++++|++
T Consensus 100 ~~~~~~~~~G~~v~~~~~~-----~~~~l~~~~~~~t------klV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea 168 (376)
T PRK06460 100 FFTDYLKNWGVNVDASNPG-----SDNIIEKAKSKRY------DVVFVENITNPLLRVVDITELSKVCKENGSILIVDAT 168 (376)
T ss_pred HHHHHHHhhCcEEEEECCC-----CHHHHHHhcCCCc------eEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 3456677789999888764 2334444433333 5888999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhh
Q psy3048 122 YAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMN 199 (367)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 199 (367)
|+.+.. .... .. .+|+++.+.+|+++++.+ .|+++. +++..+........
T Consensus 169 ~~~~~~-~~~l---~~---~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~~~l~~~~~~-------------------- 220 (376)
T PRK06460 169 FSTPIN-QKPL---EL---GADIVVHSASKFLAGHNDVIAGLAAG-YGKLLNVIDQMRRT-------------------- 220 (376)
T ss_pred cCcccc-CChh---hc---CCCEEEeecceeccCCCCceEEEEec-CHHHHHHHHHHHHh--------------------
Confidence 975421 1111 11 359999999999875533 555443 44333221100000
Q ss_pred hhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-Ee
Q psy3048 200 WLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFE-LV 278 (367)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~-~~ 278 (367)
+... ..+...+.+++ +.+.++.++++..++++++.+.|+++|.+. +.
T Consensus 221 --------------------------~g~~----~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~ 268 (376)
T PRK06460 221 --------------------------LGTS----LDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVY 268 (376)
T ss_pred --------------------------cCCC----CCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEE
Confidence 0000 01123333333 456778889999999999999999998874 44
Q ss_pred CC-----C-----------CceeEEEEEcCCchHHHHHHHHHhc--c----C---cEEEEEeE---E-----------CC
Q psy3048 279 CP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMS--H----K---QIYIIKAS---F-----------QG 319 (367)
Q Consensus 279 ~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~--~----g---~~~~~~~~---~-----------~~ 319 (367)
.| | ..++++|.+.+.......+.++|.- . | .....|.. . -.
T Consensus 269 yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~ 348 (376)
T PRK06460 269 YPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGIT 348 (376)
T ss_pred CCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCC
Confidence 33 1 2578899987533334566666531 1 1 01111110 0 02
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+.+|+|+. -||.+.+++.|++.++.+
T Consensus 349 ~~liR~svG-----lE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 349 DSLLRLSVG-----IEDVNDLIEDLDRALSTL 375 (376)
T ss_pred CCeEEEEec-----cCCHHHHHHHHHHHHHhh
Confidence 468999774 368889999999887653
No 231
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=6.1e-13 Score=127.41 Aligned_cols=249 Identities=9% Similarity=0.002 Sum_probs=157.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..+..+...++..|++++.++.+ +++.+|++++++++. +.+ .+|++++++|+||.+-|.+++.
T Consensus 102 ~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~------~lv~l~~p~NPTG~~~~~~~~~ 175 (364)
T PRK04781 102 DAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNA------KLVFLCSPSNPAGSAIALDQIE 175 (364)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCC------eEEEEcCCCCCCCCCcCHHHHH
Confidence 456667777666666678899999999973 235689999866543 333 4777889999999999988888
Q ss_pred HHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++++. +++++++|++|+-+.... ..........+ -++..+..|.++ ....+|+++.. ++.+.........+
T Consensus 176 ~l~~~~~~~~~iI~Deay~~f~~~~-~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~-~~l~~~l~~~~~~~--- 249 (364)
T PRK04781 176 RALQALQGKALVVVDEAYGEFSDVP-SAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIAN-AELIAVLRRCQAPY--- 249 (364)
T ss_pred HHHHhCCCCcEEEEeCcchhhcCCc-chHHHHhhCCC-EEEEecChhhcccccceeeeeeCC-HHHHHHHHhccCCC---
Confidence 88764 489999999997544211 11111111111 356677899987 55778887763 33332211111000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---HHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG---LKGLQAYLRKHIS 260 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~g~~~~~~~~~~ 260 (367)
.. ..+...++...+. .+...+.+++..+
T Consensus 250 -------------------------------------------~~------~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 250 -------------------------------------------PV------PTPCAALAEQALSAPALAVTARRVAEVRA 280 (364)
T ss_pred -------------------------------------------CC------CHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 00 0111222222221 1234555566777
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~ 339 (367)
..+++.+.|++++++....|+..+.+.++++. ..++.+.|.++|+....+..+ ....++||++. +.++.++
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~ 352 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYPSQGNFLLVRFDD----AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDR 352 (364)
T ss_pred HHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC----HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHH
Confidence 78889999988878754456666667776642 467888888888544333222 22569999764 5889999
Q ss_pred HHHHHHHHH
Q psy3048 340 AWNEISHQS 348 (367)
Q Consensus 340 li~~l~~~~ 348 (367)
++++|+++.
T Consensus 353 l~~al~~~~ 361 (364)
T PRK04781 353 VLAALQRTQ 361 (364)
T ss_pred HHHHHHHHH
Confidence 999998864
No 232
>PRK07505 hypothetical protein; Provisional
Probab=99.58 E-value=6.3e-13 Score=129.00 Aligned_cols=254 Identities=12% Similarity=0.067 Sum_probs=145.3
Q ss_pred eEEEecCCcchhHHH--HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSVEK--SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~--~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.+|+.+...|.|+.. .....+.+++.++.+ |+++|++++++.+ .+++++.+.+++|.+.|+++|.++
T Consensus 136 ~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l 204 (402)
T PRK07505 136 PHMVFDKNAHASLNILKGICADETEVETIDHN-----DLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRL 204 (402)
T ss_pred CEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHH
Confidence 366777789988743 222245677777763 8999999886543 377788889999999999999999
Q ss_pred HhhcCcEEEEecccccccc--cChhhhhhhCC--CCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 109 CQEYNIWLHVDAAYAGSAL--LLPEYAHLKRG--LEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~--~~~~~~~~~~~--~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|++||+++++|++|+.+.+ ....+.....+ .....+++.+..|.++.+ | |++.+.+++..........+|.+.+
T Consensus 205 ~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-G-g~~~~~~~~~~~~~~~~~~~~t~~~ 282 (402)
T PRK07505 205 QEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-G-GVIMLGDAEQIELILRYAGPLAFSQ 282 (402)
T ss_pred HHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-C-eEEEeCCHHHHHHHHHhCCCceeCC
Confidence 9999999999999853221 11111111112 122246666889988754 3 5655444433322111111111110
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. + ..+...++.+++..+..+.+.+..++..+..++
T Consensus 283 ~-------~--------------------------------------~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~ 317 (402)
T PRK07505 283 S-------L--------------------------------------NVAALGAILASAEIHLSEELDQLQQKLQNNIAL 317 (402)
T ss_pred C-------C--------------------------------------CHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 0 0 001122333444433444444444445444444
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~l 340 (367)
+.+.+... ...+.+.+..+.+.. .....++.++|.++|++ +.+... .+..++|+++ ....+++|++++
T Consensus 318 ~~~~~~~~-----~~g~~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~-v~~~~~p~~~~~~~~lRi~~-~~~~t~eei~~~ 389 (402)
T PRK07505 318 FDSLIPTE-----QSGSFLPIRLIYIGD-EDTAIKAAKQLLDRGFY-TSPVFFPVVAKGRAGLRIMF-RASHTNDEIKRL 389 (402)
T ss_pred HHHHHHhc-----CCCCCCCEEEEEeCC-HHHHHHHHHHHHHCCCe-EeeecCCCCCCCCceEEEec-CccCCHHHHHHH
Confidence 43332111 111223333333322 22456899999999854 333221 1335899965 566789999999
Q ss_pred HHHHHHHHHH
Q psy3048 341 WNEISHQSSE 350 (367)
Q Consensus 341 i~~l~~~~~~ 350 (367)
+++|++++++
T Consensus 390 ~~~l~~~l~~ 399 (402)
T PRK07505 390 CSLLKEILDE 399 (402)
T ss_pred HHHHHHHHHh
Confidence 9999998654
No 233
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=5.4e-13 Score=127.95 Aligned_cols=248 Identities=14% Similarity=0.015 Sum_probs=157.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++...++......++..|.+++.++.++++.+|++++++++++.. +.+++++.++|++|.+.+.+++.++|+
T Consensus 113 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~ 187 (368)
T PRK03317 113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILD 187 (368)
T ss_pred CEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 346667788888888888889998888876778999999999987432 236778899999999999999999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcc-eeeecccccccc-CCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD-SFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D-~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
.+++++++|++|+.+............+. .-+ +++.+..|.++. ...+|+++.. ++...........
T Consensus 188 ~~~~~lI~DE~y~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~~~~l~~~~~~--------- 256 (368)
T PRK03317 188 AAPGIVVVDEAYAEFRRSGTPSALTLLPE-YPRLVVSRTMSKAFAFAGGRLGYLAAA-PAVVDALRLVRLP--------- 256 (368)
T ss_pred HCCceEEEeCCchhhcccCCcCHHHHHHh-CCCEEEEEechhhhccchhhhhhhhCC-HHHHHHHHhcCCC---------
Confidence 99999999999986532211000001011 113 455688999974 4567887763 3333221100000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
| . ...+....+..+++. .+.+.+..++..+..+++.+.
T Consensus 257 ------~-------------------------------~---~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~ 294 (368)
T PRK03317 257 ------Y-------------------------------H---LSAVTQAAARAALRH--ADELLASVAALRAERDRVVAW 294 (368)
T ss_pred ------C-------------------------------C---CCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000111122223322 233444556667777888888
Q ss_pred hcCCCCeEEeCCCCceeEEE-EEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCF-RLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f-~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
|+++ |+.+.. +..+.+.+ .+. ...++.+.|.++|+ .+.+. ..+.++|++++ +.+++++++++|+++
T Consensus 295 L~~~-g~~~~~-~~~~~~~~~~~~----~~~~~~~~l~~~Gv-~v~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~ 361 (368)
T PRK03317 295 LREL-GLRVAP-SDANFVLFGRFA----DRHAVWQGLLDRGV-LIRDV--GIPGWLRVTIG----TPEENDAFLAALAEV 361 (368)
T ss_pred HHHC-CCEeCC-CCCcEEEEeccC----CHHHHHHHHHHCCE-EEEeC--CCCCeEEEecC----CHHHHHHHHHHHHHH
Confidence 8886 776543 44444444 222 25678888888884 44432 23469999753 578999999999988
Q ss_pred HH
Q psy3048 348 SS 349 (367)
Q Consensus 348 ~~ 349 (367)
++
T Consensus 362 ~~ 363 (368)
T PRK03317 362 LA 363 (368)
T ss_pred HH
Confidence 65
No 234
>KOG1357|consensus
Probab=99.57 E-value=1.1e-13 Score=128.86 Aligned_cols=266 Identities=14% Similarity=0.087 Sum_probs=171.7
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC-------CCccEEEEEecCCCcccccCC
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK-------GLIPCCLVATLGTTGTCAFDN 101 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~-------~~~~~~vv~~~~~t~~G~i~d 101 (367)
+..-|+.++.+|.|+..+|++.|+..+.+..+ |+.+||+.|++...+ .+..++|++-.-.++-|.+.+
T Consensus 220 ~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~ 294 (519)
T KOG1357|consen 220 KGSLIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD 294 (519)
T ss_pred CCcceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc
Confidence 46778899999999999999999999999987 899999999886543 244456777777778999999
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccC-----hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLL-----PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT 176 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 176 (367)
+.++.+++|+|.++++.|+||+++.+.. ..+.. .+.+.+|++-....|.+.+. |.....++.... .+..
T Consensus 295 Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g--~d~~dvDImMGtftKSfga~---GGyiagsk~lid-~lrt 368 (519)
T KOG1357|consen 295 LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFG--VDPEDVDIMMGTFTKSFGAA---GGYIAGSKELID-YLRT 368 (519)
T ss_pred cHHHHHhhccccEEEEeeccccccccCCCCcceeeccC--CCchhheeecceehhhcccc---cceecCcHHHHh-hhcc
Confidence 9999999999999999999999877621 11111 12346799999999988743 222222232222 1111
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh----hHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY----GLKGLQ 252 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~g~~ 252 (367)
...+.. | ....++.. +-....+++.+ +.++-+
T Consensus 369 ~s~~~~------------y-------------------------------at~~sppv-aqq~~ssl~~i~G~dgt~~g~ 404 (519)
T KOG1357|consen 369 PSPSAL------------Y-------------------------------ATSLSPPV-AQQILTSVKHIMGEDGTNRGR 404 (519)
T ss_pred CCCcee------------e-------------------------------cccCChHH-HHHHHHHHHhhcCCCcccHHH
Confidence 111110 0 00011100 01111223322 344567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC---CeeEEEEEecC
Q psy3048 253 AYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ---GRPFLRFVVTS 329 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~---~~~~lRi~~~~ 329 (367)
+..++..++++|++..|++. ||.+.+...++++-+-+.+.. ....+...|.++....+..+..- -....|++. +
T Consensus 405 ~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~-S 481 (519)
T KOG1357|consen 405 QKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-KIVAFSREMLERNIGVVVVGFPATPLLESRARFCL-S 481 (519)
T ss_pred HHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-cccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhh-c
Confidence 78889999999999999986 898888766655544433322 12345545555554333222111 123568844 5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~~ 352 (367)
.+.+.||+|++++.+.+..++..
T Consensus 482 a~ht~e~ld~~l~~i~~~g~~~~ 504 (519)
T KOG1357|consen 482 ASHTKEDLDRALEVIDRVGDEDG 504 (519)
T ss_pred ccccHHHHHHHHHHHhhhchhhc
Confidence 66679999999999999876543
No 235
>PRK05939 hypothetical protein; Provisional
Probab=99.57 E-value=2.2e-13 Score=131.47 Aligned_cols=263 Identities=13% Similarity=0.084 Sum_probs=158.0
Q ss_pred EEEecCCcchh---HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSS---VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s---~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|++++..|.+ +...+...|++++.++.. |+++|++++++++ .+|++.+++|++|.+.|+++|+++
T Consensus 88 ~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-----d~e~l~~~l~~~t------klV~vesp~NptG~v~dl~~I~~l 156 (397)
T PRK05939 88 HLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-----DVQNVAAAIRPNT------RMVFVETIANPGTQVADLAGIGAL 156 (397)
T ss_pred EEEECCCccccHHHHHHHHHhcCCEEEEECCC-----CHHHHHHhCCCCC------eEEEEECCCCCCCCHHhHHHHHHH
Confidence 45556666543 344566689999999863 8999999997765 488889999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchh-hhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANH-LTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~-~~~~~~~~~~yl~~~~~ 186 (367)
||++|+++++|++|+.+... + .... .+|+++.+.+|+++++.+ .|++++.+... ..........|....
T Consensus 157 a~~~gi~livD~t~a~~~~~-~---~~~~---gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~-- 227 (397)
T PRK05939 157 CRERGLLYVVDNTMTSPWLF-R---PKDV---GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGD-- 227 (397)
T ss_pred HHHcCCEEEEECCccccccc-C---cccc---CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccc--
Confidence 99999999999999765322 1 1111 359999999999997522 34444422210 000000000000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
...+.+.... .......+....+...| +...|.+-+..+++++.+++..+.
T Consensus 228 -----~~~~~~~~~~----------------------~~~~~~~G~~~~p~~a~--l~~rgl~tl~~R~~~~~~na~~la 278 (397)
T PRK05939 228 -----PQQWGLTQIR----------------------KKGLRDMGATLSSEAAH--RIAIGAETLALRVDRSCSNALALA 278 (397)
T ss_pred -----hhhHHHHHHH----------------------HHHHHhcCCCCCHHHHH--HHHcCcCcHHHHHHHHHHHHHHHH
Confidence 0000000000 00000011112233444 334467788889999999999999
Q ss_pred HHhcCCCCeE-EeCCC----------------CceeEEEEEcCCchHHHHHHHHHhc--cC-------cEEEEEe--EE-
Q psy3048 267 DLVEKDDRFE-LVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMS--HK-------QIYIIKA--SF- 317 (367)
Q Consensus 267 ~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~--~g-------~~~~~~~--~~- 317 (367)
+.|+++|.+. +..|. ..++++|.+.+ .....++.+.|.- .+ .+..+|. .+
T Consensus 279 ~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~-~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~ 357 (397)
T PRK05939 279 QFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD-GIDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYY 357 (397)
T ss_pred HHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC-HHHHHHHHHhCCcceEccCCCCCCeeeecCcccccc
Confidence 9999999864 44431 24788999875 3334456665532 11 0111111 00
Q ss_pred ---------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 ---------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ---------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
. ..+.+|+|+. -||++.+++.|++.++
T Consensus 358 ~~~~~~~~~~gi~~~lvR~svG-----lEd~~dLi~dl~~Al~ 395 (397)
T PRK05939 358 EMGAERRASMGIADSLIRVSVG-----IEDEADLIADFEQALD 395 (397)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC-----CCCHHHHHHHHHHHHh
Confidence 0 1468999874 3689999999988875
No 236
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.57 E-value=4.8e-13 Score=130.21 Aligned_cols=258 Identities=12% Similarity=0.053 Sum_probs=154.2
Q ss_pred ceEEEecCCcchhHHHHHHhCC------------cceEEEecCC------CCCcCHHHHHHHHHHHhhCCCccEEEEEec
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDD------NGVLRGDALLTAVKEDLAKGLIPCCLVATL 91 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~ 91 (367)
+.+++.+...|-+...++...+ .+++.++.+. +...|+++|++.+++.. ..+.++++..
T Consensus 123 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p 199 (413)
T cd00610 123 KKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP---EEVAAVIVEP 199 (413)
T ss_pred CeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC---CCEEEEEEcc
Confidence 4566666667776655554432 2456666652 23448899999887521 1235677777
Q ss_pred CCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecc
Q psy3048 92 GTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 92 ~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
..+++|.+.| +++|.++|++||+++++|++|+++............++ ..|+++++ |+++.+..+|+++.+ +
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~-~ 275 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGR-E 275 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEc-H
Confidence 7777798877 99999999999999999999986422211111111222 34766554 999987778988764 3
Q ss_pred hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh
Q psy3048 168 NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG 247 (367)
Q Consensus 168 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 247 (367)
+.... +. ...+... ..-.+....+.+..++++.+.
T Consensus 276 ~~~~~-~~-~~~~~~~-------------------------------------------~t~~~~~~~~~a~~a~l~~l~ 310 (413)
T cd00610 276 EIMDA-FP-AGPGLHG-------------------------------------------GTFGGNPLACAAALAVLEVLE 310 (413)
T ss_pred HHHHh-hc-cCCCCCC-------------------------------------------CCCCcCHHHHHHHHHHHHHHH
Confidence 33321 10 0000000 000011122344445555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEe--CCCCceeEEEEEcCCc-------hHHHHHHHHHhccCcEEEEEeEE
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEKDDR-FELV--CPPSMGLVCFRLKGDN-------DLTNQLYERLMSHKQIYIIKASF 317 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~~~g-~~~~--~~~~~~~v~f~~~~~~-------~~~~~l~~~L~~~g~~~~~~~~~ 317 (367)
. .++.++..++.+++++.|+++.. ..++ ..+...++.+.+.... ....++.+.|.++|+ ++.+..
T Consensus 311 ~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv-~v~~~~- 385 (413)
T cd00610 311 E---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGL-LLRPSG- 385 (413)
T ss_pred h---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCe-EEeecC-
Confidence 3 34566778888888888876521 1111 1234456666664321 345678889999984 444332
Q ss_pred CCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 318 QGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 318 ~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...+|+++ +...+++|+++++++|+++
T Consensus 386 --~~~lR~~~-~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 386 --GNVIRLLP-PLIITEEEIDEGLDALDEA 412 (413)
T ss_pred --CCEEEEEC-CCcCCHHHHHHHHHHHHHh
Confidence 45899965 5667899999999999875
No 237
>PLN02231 alanine transaminase
Probab=99.57 E-value=9.6e-13 Score=131.40 Aligned_cols=270 Identities=12% Similarity=0.102 Sum_probs=163.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++....+......+...|++++.+++++ ++.+|+++|++++++..+++..+.+++++.++|+||.+ +.+++
T Consensus 216 gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~ 295 (534)
T PLN02231 216 KDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRD 295 (534)
T ss_pred CCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHH
Confidence 34567778899888888899999999999864 47999999999998754444345678888999999998 57788
Q ss_pred HHHHHhhcCcEEEEecccccccccC-hh---hhhhhC--CC--CCccee-eeccccccc--cCCcceeEEEe--cchhhh
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLL-PE---YAHLKR--GL--EYVDSF-AFNAHKWLL--TNHDCSAMWVK--NANHLT 171 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~-~~---~~~~~~--~~--~~~D~~-~~~~hK~l~--~p~g~g~l~~~--~~~~~~ 171 (367)
|+++|++||+++++|++|.-..+.. .. +..... +. +....+ ..+..|.+. .+..+|++.+. +++..+
T Consensus 296 Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~ 375 (534)
T PLN02231 296 IVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVRE 375 (534)
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHH
Confidence 9999999999999999997655421 11 111110 11 111234 447899654 45778888763 233332
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH--hhHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS--YGLK 249 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~ 249 (367)
...... . ... ++...........+.. .+..
T Consensus 376 ~l~k~~-~-~~~----------------------------------------------~s~~~~Q~~~~~~l~~p~~~~~ 407 (534)
T PLN02231 376 QIYKVA-S-VNL----------------------------------------------CSNISGQILASLVMSPPKPGDE 407 (534)
T ss_pred HHHHHH-h-hhc----------------------------------------------CCChHHHHHHHHHhCCCCCCcc
Confidence 211000 0 000 0000001111111110 0011
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCCch-----------HHHHHHHHHh-ccCc
Q psy3048 250 -------GLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCF-RLKGDND-----------LTNQLYERLM-SHKQ 309 (367)
Q Consensus 250 -------g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~~-----------~~~~l~~~L~-~~g~ 309 (367)
..+++.+...+.++++.+.|++++|+.+..| +.+...| ++..... ....++..|. +.|+
T Consensus 408 ~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV 486 (534)
T PLN02231 408 SYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGI 486 (534)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCE
Confidence 1233456677888889999998888887544 4444444 3321110 0123455555 4575
Q ss_pred EEEEEeEEC---CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 310 IYIIKASFQ---GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 310 ~~~~~~~~~---~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.++.++.+. +..++|+++. .++++++..++.|.++.++.
T Consensus 487 ~vvPGs~Fg~~~g~~~~Rit~~---~~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 487 VVVPGSGFGQVPGTWHFRCTIL---PQEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred EEeCCcccCCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHHH
Confidence 444433332 3457999763 47899999999998887765
No 238
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.57 E-value=5.6e-13 Score=128.97 Aligned_cols=250 Identities=12% Similarity=0.061 Sum_probs=154.9
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|++.+..+..+...++..|++++.+++++ ++.+|+++|++++.+.+ .++++++++|+||.+-+ +++|+
T Consensus 118 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPtG~~~s~~~~~~l~ 191 (393)
T TIGR03538 118 LVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRC------QLLFVCSPGNPTGAVLSLDTLKKLI 191 (393)
T ss_pred eEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcc------eEEEEeCCCCCcCcccCHHHHHHHH
Confidence 477788888888888888999999999853 46789999999886654 47777899999999855 78899
Q ss_pred HHHhhcCcEEEEecccccccccC--hh--hhhhhCCCC----Ccceeeeccccc-cccCCcceeEEEecchhhhhhccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLL--PE--YAHLKRGLE----YVDSFAFNAHKW-LLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~--~~--~~~~~~~~~----~~D~~~~~~hK~-l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
++|++||+++++|++|+-..+.. +. ......... .--+++.+..|. +.....+|+++.. +..+.+....
T Consensus 192 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~-~~l~~~~~~~- 269 (393)
T TIGR03538 192 ELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD-AEILKAFLRY- 269 (393)
T ss_pred HHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC-HHHHHHHHHH-
Confidence 99999999999999997554321 00 000000010 012677889995 4555778887763 2333221100
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLR 256 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~ 256 (367)
..+... . ...+...+++..+. .+.+++..+
T Consensus 270 ~~~~~~-------------------------------------------~------~~~~~q~~~~~~l~~~~~~~~~~~ 300 (393)
T TIGR03538 270 RTYHGC-------------------------------------------A------MPIPTQLASIAAWNDEQHVRENRA 300 (393)
T ss_pred HHhhcc-------------------------------------------C------cCHHHHHHHHHHhcChHHHHHHHH
Confidence 000000 0 00112222222222 334566666
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEE---------CCeeEEEEE
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASF---------QGRPFLRFV 326 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~---------~~~~~lRi~ 326 (367)
+.++..+.+.+.|++. +.+..|.....++++++. + ..++.+.|.+ .|+ .+.++.. .+.+++|++
T Consensus 301 ~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~~-~--~~~~~~~l~~~~gV-~v~pg~~f~~~~~~~~~~~~~~Ris 374 (393)
T TIGR03538 301 LYREKFAAVLEILGQV--LDLELPDAGFYLWPKVPG-D--DEAFARALYEEENV-TVLPGRFLAREAEGVNPGEGRVRIA 374 (393)
T ss_pred HHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECCC-C--HHHHHHHHHHHCCE-EEeCCccccccccCCCCCCCEEEEE
Confidence 6677777787887764 333334455566666651 2 4578878764 564 4443322 124699998
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q psy3048 327 VTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~ 347 (367)
++. ++++++.++++|+++
T Consensus 375 ~~~---~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 375 LVA---PLEECVEAAERIRSF 392 (393)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 753 578899888888764
No 239
>PRK08175 aminotransferase; Validated
Probab=99.57 E-value=7.7e-13 Score=128.11 Aligned_cols=262 Identities=14% Similarity=0.088 Sum_probs=162.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh---hhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL---EELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl---~~I~~ 107 (367)
-.|++++.+|......++..|++++.++.++++ .++++|++++++... .+.++++++++|++|.+-+. ++|++
T Consensus 116 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~l~~~l~~~~~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~ 191 (395)
T PRK08175 116 DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-DFFNELERAIRESYP---KPKMMILGFPSNPTAQCVELEFFEKVVA 191 (395)
T ss_pred CEEEEcCCCCcchHHHHHHcCCeEEEEecccCC-CcHHHHHHHHhhccC---CceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 457777888888888888899999999986543 358899988865211 13577788899999998666 79999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhh--hCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
+|++||+++++|++|+...+........ +.+.....+++.+..|.++.| ..+|+++. +++...... ....+...
T Consensus 192 ~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~~~~-~~~~~~~~- 268 (395)
T PRK08175 192 LAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALA-RIKSYHDY- 268 (395)
T ss_pred HHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHHHHH-HHHhhccc-
Confidence 9999999999999997544321100000 111111235678899999644 55787765 333332211 00000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
+ ............+.. ....+++..++..+..++
T Consensus 269 ------------------------------------------~---~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 302 (395)
T PRK08175 269 ------------------------------------------G---TFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDV 302 (395)
T ss_pred ------------------------------------------C---CCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHH
Confidence 0 000001111222221 233466666777788888
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCc--hHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDN--DLTNQLYERLMS-HKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~--~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edid 338 (367)
+.+.|+++ |+.+..+.....++++++..- ....++..+|.+ .| +.+.++. + .+..++|+++. .+++.+.
T Consensus 303 ~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~g-v~v~p~~~f~~~~~~~lRis~~---~~~~~~~ 377 (395)
T PRK08175 303 LVKGLHEA-GWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAK-VCVSPGIGFGDYGDTHVRFALI---ENRDRIR 377 (395)
T ss_pred HHHHHHHc-CCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCC-EEEeCchhhCcCCCCeEEEEeC---CCHHHHH
Confidence 99999887 776654555667777775421 124678777764 56 4555432 2 23468999764 3688899
Q ss_pred HHHHHHHHHHHH
Q psy3048 339 FAWNEISHQSSE 350 (367)
Q Consensus 339 ~li~~l~~~~~~ 350 (367)
.+++.|.+++++
T Consensus 378 ~al~~l~~~l~~ 389 (395)
T PRK08175 378 QAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHHHh
Confidence 998888888764
No 240
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.57 E-value=1.2e-13 Score=131.24 Aligned_cols=247 Identities=15% Similarity=0.087 Sum_probs=146.4
Q ss_pred CCcchhHHHHHHh-------CCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 37 DQSNSSVEKSAII-------GDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 37 ~~~H~s~~~~~~~-------~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-+|.|....... ...+++.++++ +++.+|.+++++.+++.. |.+|++.. ++ .-...|++++.+|
T Consensus 120 ~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k-----PklIi~G~-S~-y~~~~d~~~~reI 192 (399)
T PF00464_consen 120 HGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK-----PKLIICGA-SS-YPRPIDFKRFREI 192 (399)
T ss_dssp GT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEEE--SS-TSS---HHHHHHH
T ss_pred hcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC-----CCEEEECc-hh-ccCccCHHHHHHH
Confidence 3456665443322 22466777777 679999999999998765 56766653 23 3444689999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEec-------------chhhhhhcc
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKN-------------ANHLTNTFF 175 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~-------------~~~~~~~~~ 175 (367)
|++.|+++++|.||-.+.+....+.. .++.||+++++.||.|.+|.| |++++++ .+..++ +.
T Consensus 193 ad~vga~l~~D~sH~~GLIa~g~~~~---P~~~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~-I~ 267 (399)
T PF00464_consen 193 ADEVGAYLMADISHIAGLIAGGLFPN---PFPYADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEK-ID 267 (399)
T ss_dssp HHHTT-EEEEE-TTTHHHHHTTSS-----GCCTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHH-HH
T ss_pred HHhcCcEEEecccccccceehheecC---ccccceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHH-hc
Confidence 99999999999999888776655543 345689999999999999855 7888871 221111 10
Q ss_pred CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHHHHhhHHHHHHH
Q psy3048 176 TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTLRSYGLKGLQAY 254 (367)
Q Consensus 176 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~ 254 (367)
..++++.. ++... ...++..++.......+++.
T Consensus 268 ---~avfP~~q-------------------------------------------g~~h~~~iaalAval~ea~~~~fk~Y 301 (399)
T PF00464_consen 268 ---SAVFPGLQ-------------------------------------------GGPHMHRIAALAVALKEALSPEFKEY 301 (399)
T ss_dssp ---HHHTTTT--------------------------------------------SS--HHHHHHHHHHHHHHTSHHHHHH
T ss_pred ---cccCCCcc-------------------------------------------cCcchhHHHHHHHHHhcccCHHHHHH
Confidence 11111111 11111 12344555666555566888
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeC-CCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC------CeeEEEEEe
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELVC-PPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ------GRPFLRFVV 327 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~------~~~~lRi~~ 327 (367)
.++..++++.|.+.|.+. |++++. -.+.++|.+.+...+....+..++|.+.|++ +...... ....+|+..
T Consensus 302 a~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~-vnkn~iP~d~~~~~~sGlRlGT 379 (399)
T PF00464_consen 302 AKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGII-VNKNTIPGDRSPFVPSGLRLGT 379 (399)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE--EEE--TTTSTTTT-SEEEEES
T ss_pred HHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCee-ecccccCCCCCCCCCCEEEECC
Confidence 999999999999999996 999986 3477888888754222345677777777743 4332221 135799954
Q ss_pred ---cCCCCCHHHHHHHHHH
Q psy3048 328 ---TSPETNQCDVAFAWNE 343 (367)
Q Consensus 328 ---~~~~~~~edid~li~~ 343 (367)
+.....++|++.+.+.
T Consensus 380 ~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 380 PALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp HHHHHTT--HHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHhh
Confidence 2345567888877654
No 241
>KOG2040|consensus
Probab=99.56 E-value=1.2e-12 Score=126.44 Aligned_cols=298 Identities=15% Similarity=0.106 Sum_probs=190.6
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
+++|.+.|+|...+- .--|-+.+++-++|-.....+.+.|.+|+.|.++.+|.+|..+|+++.++..++
T Consensus 612 YaGL~~IRaY~~~kg-----------e~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~ 680 (1001)
T KOG2040|consen 612 YAGLRVIRAYLESKG-----------EGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDN 680 (1001)
T ss_pred hhhHHHHHHHHHhcc-----------CCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhh
Confidence 468899999988662 234677778889999999999999999999999999999999999998876643
Q ss_pred CCccEEEEEecCCCcccccC-ChhhHHHHHhhcCcEEEEeccccccc-ccChhhhhhhCCCCCcceeeeccccccccCCc
Q psy3048 81 GLIPCCLVATLGTTGTCAFD-NLEELGPICQEYNIWLHVDAAYAGSA-LLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD 158 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~-dl~~I~~l~~~~gi~l~vD~a~~~~~-~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g 158 (367)
...+.+++|+| .|+++ .+++++++.|+||--++.|||.=-.. -.+.+ |--.+|+...+.||.|.-|.|
T Consensus 681 ---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~p------Gd~GaDV~HLNLHKTFcIPHG 750 (1001)
T KOG2040|consen 681 ---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRP------GDIGADVCHLNLHKTFCIPHG 750 (1001)
T ss_pred ---hheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCC------ccccccceeecccceeeecCC
Confidence 35789999977 79884 89999999999999999999742111 11111 212459999999999988866
Q ss_pred ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHH
Q psy3048 159 CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALK 238 (367)
Q Consensus 159 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
.|.=-+. +...++ .-++|+.+.+.- +|....+ ...-|+-+...|..+. .. --
T Consensus 751 GGGPg~g-PIgVK~---HLapfLP~HpVv-------------------s~~~~~~-~~~~gsVsaaP~Gsa~---IL-pI 802 (1001)
T KOG2040|consen 751 GGGPGMG-PIGVKK---HLAPFLPSHPVV-------------------SPGRPED-TSPVGSVSAAPWGSAL---IL-PI 802 (1001)
T ss_pred CCCCCCC-ccchhh---hccccCCCCCcc-------------------CCCCCCC-CCCccceeccCCCcce---ee-hh
Confidence 5541110 111111 123455443320 0000000 0000100001111110 11 12
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCc----eeEEEEEcCC----chHHHHHHHHHhccCcE
Q psy3048 239 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSM----GLVCFRLKGD----NDLTNQLYERLMSHKQI 310 (367)
Q Consensus 239 ~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~----~~v~f~~~~~----~~~~~~l~~~L~~~g~~ 310 (367)
-|+.++.+|..|+.+.-+-..-+++|+.++|+++ .+++..... ..+.+.+.+- +..+-+++++|.+-|..
T Consensus 803 SwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFH 880 (1001)
T KOG2040|consen 803 SWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFH 880 (1001)
T ss_pred HHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCC
Confidence 3788999999999988888889999999999986 444442222 2222333221 23356899999988832
Q ss_pred EEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 311 YIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 311 ~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+. -.|.-.+.+=|-+ .-.-+++|+|+|++++-.+-+|+
T Consensus 881 aPT-mswPV~gtLMIEP-TESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 881 APT-MSWPVAGTLMIEP-TESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred CCc-cccccCCceEecc-CccccHHHHHHHHHHHHHHHHHH
Confidence 221 2333334454433 34456899999999987766554
No 242
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=5.1e-13 Score=128.12 Aligned_cols=245 Identities=13% Similarity=0.113 Sum_probs=159.7
Q ss_pred eEEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..+.++.. .++..|+++++++.+ +.+.+++++++++ .+|.+++++|+++.+.||++|+
T Consensus 104 D~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-----~~e~l~~al~~~T------klV~lesPsNP~l~v~dl~~I~ 172 (395)
T PRK05967 104 DHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-----IGAGIAKLMRPNT------KVVHTEAPGSNTFEMQDIPAIA 172 (395)
T ss_pred CEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHH
Confidence 356667778888764 345679999998653 4578999998776 4899999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||++|++++||++++...+. ...+ .| +|+++.+..|++.+..+ .|++ +.++....+.. .+...
T Consensus 173 ~la~~~g~~vvVD~t~a~p~~~-~pl~---~G---aDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~----~~~~~- 239 (395)
T PRK05967 173 EAAHRHGAIVMMDNTWATPLYF-RPLD---FG---VDISIHAATKYPSGHSDILLGTV-SANEKCWPQLL----EAHGT- 239 (395)
T ss_pred HHHHHhCCEEEEECCccCceec-ChhH---cC---CCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHH----HHHHH-
Confidence 9999999999999999764332 2222 24 49999999999664322 4433 33333222110 00000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.+....+...|. ...|.+-+.-+++++.+.+..
T Consensus 240 ---------------------------------------------~G~~~~p~da~l--~~rgl~Tl~lR~~~~~~na~~ 272 (395)
T PRK05967 240 ---------------------------------------------LGLCAGPDDTYQ--ILRGLRTMGIRLEHHRKSALE 272 (395)
T ss_pred ---------------------------------------------cCCCCCHHHHHH--HHcCcccHHHHHHHHHHHHHH
Confidence 001112244443 344677788899999999999
Q ss_pred HHHHhcCCCCeE-EeCCC----------------CceeEEEEEcCC----chHHHHHHHHHhcc--C-------cEEEEE
Q psy3048 265 FADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGD----NDLTNQLYERLMSH--K-------QIYIIK 314 (367)
Q Consensus 265 l~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~----~~~~~~l~~~L~~~--g-------~~~~~~ 314 (367)
+.+.|+++|.+. +..|. ..++++|.+++. .+...++.++|.-- + .+..++
T Consensus 273 lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~ 352 (395)
T PRK05967 273 IARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHV 352 (395)
T ss_pred HHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeC
Confidence 999999999874 55441 247899999642 23344666665421 1 000110
Q ss_pred eE-E-------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 315 AS-F-------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 315 ~~-~-------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.. . ...+.+|+|+. -||.+.+++.|++.++.+
T Consensus 353 ~~~~~~~~~~~~~~~liRlSvG-----lEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 353 KLGDRTVAKAPYAGPVIRLQIG-----LEDVPDLKADLERGFAAA 392 (395)
T ss_pred CCChhHhhhccCCCCeEEEEec-----cCCHHHHHHHHHHHHHhh
Confidence 00 0 01248999774 367888899998887754
No 243
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.2e-12 Score=124.10 Aligned_cols=247 Identities=13% Similarity=0.051 Sum_probs=167.7
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
.|+++..++......++..|++++.|+.++ +.+|++.+.+++.+.+ .+|.+++|+|+||..-+.++|.+++..
T Consensus 101 ~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~------~lv~i~nPNNPTG~~~~~~~l~~l~~~ 173 (356)
T COG0079 101 TVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKT------KLVFLCNPNNPTGTLLPREELRALLEA 173 (356)
T ss_pred EEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 455567788888888999999999999977 9999999999998854 489999999999999777777777664
Q ss_pred c--CcEEEEecccccccccChhhhhhhCCCCCcc--eeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 112 Y--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVD--SFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 112 ~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D--~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
- +.+++||+||.-+.- +.... .+...+ ++.=+..|.++.+ ..+|+.+. +++.+........+|
T Consensus 174 ~~~~~~vVvDEAY~eF~~--~~~~~---l~~~~~nlivlRTfSKa~gLAGlRlGy~ia-~~~~i~~l~~vr~p~------ 241 (356)
T COG0079 174 LPEGGLVVIDEAYIEFSP--ESSLE---LLKYPPNLIVLRTFSKAFGLAGLRVGYAIA-NPELIAALNKVRPPF------ 241 (356)
T ss_pred CCCCcEEEEeCchhhcCC--chhhh---hccCCCCEEEEEecHHhhhcchhceeeccC-CHHHHHHHHHhcCCC------
Confidence 3 889999999854322 11111 111223 4555678866554 56777443 444443221111111
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~~l 265 (367)
.. ..++..++...+ ..+-+++.+++..+.++++
T Consensus 242 ----------------------------------------~v------~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl 275 (356)
T COG0079 242 ----------------------------------------NV------SSPALAAAIAALRDADYLEESVERIREERERL 275 (356)
T ss_pred ----------------------------------------CC------CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 10 112333333322 2356788888899999999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
.+.|++++ +.-+.|...|.+.++++. .. ...+.+.|.++|++.-.... .....++||++. ++++.++++++|
T Consensus 276 ~~~l~~~~-~~~v~pS~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL 348 (356)
T COG0079 276 YAALKALG-LFGVFPSQANFVLVRVPD-AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAAL 348 (356)
T ss_pred HHHHHhCC-CCeecCCCCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHH
Confidence 99999985 553445667888888765 33 56899999999954333222 123569999774 577889999999
Q ss_pred HHHHHH
Q psy3048 345 SHQSSE 350 (367)
Q Consensus 345 ~~~~~~ 350 (367)
+++.+.
T Consensus 349 ~~~~~~ 354 (356)
T COG0079 349 REVLKG 354 (356)
T ss_pred HHHHhc
Confidence 998654
No 244
>PRK06855 aminotransferase; Validated
Probab=99.55 E-value=1.2e-12 Score=128.06 Aligned_cols=265 Identities=13% Similarity=0.044 Sum_probs=156.7
Q ss_pred eEEEecCCcchhHHHHH-HhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 31 LVAYASDQSNSSVEKSA-IIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~-~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
-.|++.+.++.....+. ...|++++.++.+ +++.+|+++|+++++...+ +.++++++++||||.+- .+++
T Consensus 120 d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~----~~~i~l~~P~NPTG~~~s~~~~~~ 195 (433)
T PRK06855 120 ARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPS----IAGILLINPDNPTGAVYPKEILRE 195 (433)
T ss_pred CeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCC----ceEEEEECCCCCCCcCCCHHHHHH
Confidence 34666677777654432 3458888888875 3478999999999863211 24677889999999994 4677
Q ss_pred HHHHHhhcCcEEEEecccccccccChh---hhhhhCCCCCcceeeeccccccc-cCCcceeEEEecc---hhhhhhccCC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNA---NHLTNTFFTD 177 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~---~~~~~~~~~~ 177 (367)
|+++|++||++++.|++|+...+.... ......+ .-.++..+..|.++ ....+|+++..+. ..+...+...
T Consensus 196 l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~--~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~ 273 (433)
T PRK06855 196 IVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD--VPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSI 273 (433)
T ss_pred HHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc--CCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHH
Confidence 788899999999999999865442211 1111111 11367788899996 5688999887321 1111111000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh----HHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG----LKGLQA 253 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~g~~~ 253 (367)
..+.... .+.. .+...++...+. .+.+++
T Consensus 274 ~~~~~~~--------------------------------------------~~~~---~~~Q~a~~~~l~~~~~~~~~~~ 306 (433)
T PRK06855 274 LNAKMIE--------------------------------------------VCST---TLPQMAIPRIMSHPEYKNYLKE 306 (433)
T ss_pred HHhhccc--------------------------------------------cCCC---hHHHHHHHHhhcCCcHHHHHHH
Confidence 0000000 0000 112222222221 234566
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc--------------------------hHHHHHHHH-Hhc
Q psy3048 254 YLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN--------------------------DLTNQLYER-LMS 306 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~--------------------------~~~~~l~~~-L~~ 306 (367)
..+...+..+.+.+.|++++|+.+..|.....+++++++.- ....++... +.+
T Consensus 307 ~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (433)
T PRK06855 307 RNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLAS 386 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 66677788888899998887876544433344555554310 013345544 445
Q ss_pred cCcEEEEEeE-EC-CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 307 HKQIYIIKAS-FQ-GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 307 ~g~~~~~~~~-~~-~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.|+ .+.|+. +. ....+|++++. .++++++..++.|.+++++.
T Consensus 387 ~gV-~v~PG~~F~~~~~~~Rls~~~--~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 387 TGI-CVVPLSSFCTELNGFRVTLLE--RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred cCE-EEecCCcCCCCCCceEEEECC--CcHHHHHHHHHHHHHHHHHH
Confidence 564 444443 31 22369998753 36899999999999988753
No 245
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=5.3e-13 Score=129.32 Aligned_cols=276 Identities=13% Similarity=0.157 Sum_probs=162.4
Q ss_pred EEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...+.+.... +...|+++++++. .+|+++++++++++|+ +|++.++.|+++.+.||++|++
T Consensus 102 ~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~----~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~ 171 (432)
T PRK06702 102 HLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP----NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSD 171 (432)
T ss_pred EEEECCCchHHHHHHHHHHHHHCCCEEEEECC----CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHH
Confidence 566777888766555 5668999999864 3699999999988774 6777889999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||++|+++++|++++...+ ...+. .| +|+.+.|..||+++..+ .|.+.+.... +.-........+.....
T Consensus 172 iA~~~gi~livD~T~~tP~~-~~pl~---~G---ADIvv~S~TKy~~Ghsd~l~G~v~~~~~-~~w~~~~~~~l~~~~~~ 243 (432)
T PRK06702 172 AAKELEVPFIVDNTLATPYL-CQAFE---HG---ANIIVHSTTKYIDGHASSLGGIVIDGGN-FDWTNGKYPELVEPDPS 243 (432)
T ss_pred HHHHcCCEEEEECCCCchhh-CChhh---cC---CCEEEEccccccCCCcceeceEEEeCCC-ccccccccccccccccc
Confidence 99999999999999864433 22111 23 59999999999998743 4444442221 10000000000000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
-+. +.|..... -++........ ..+++. ....++..|.. ..+.+-++.++++..+++.++.
T Consensus 244 -------~~~-~~~~~~~~-~~~~~~~~~~~----~~~~~g----~~~sp~~a~l~--~rgL~Tl~lR~~r~~~Na~~la 304 (432)
T PRK06702 244 -------YHG-VSYVQNFG-AAAYIVKARVQ----LLRDYG----NCMSPFNAYIS--NIGLETLHLRMERHSENALAVA 304 (432)
T ss_pred -------ccc-cchhhccc-hhhHHHHHHHH----HHHHcc----CCCCHHHHHHH--HhccCcHHHHHHHHHHHHHHHH
Confidence 000 00000000 00000000000 001111 12233444443 4456678899999999999999
Q ss_pred HHhcCCCCeEE-eCC-----C------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEEEEEe--EE
Q psy3048 267 DLVEKDDRFEL-VCP-----P------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIYIIKA--SF 317 (367)
Q Consensus 267 ~~L~~~~g~~~-~~~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~~~~~--~~ 317 (367)
+.|+++|.+.- ..| | ..++++|.+++..+...++.+.|.--. .+...|. .+
T Consensus 305 ~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th 384 (432)
T PRK06702 305 KWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTH 384 (432)
T ss_pred HHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCc
Confidence 99999998763 333 1 136889998753333446666553211 0111110 01
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
. ..+.+|+|+. -||+|.+++.|++.++
T Consensus 385 ~~~~~~~~~~~Gi~~~liRlSvG-----lEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 385 RQLSAEDQRLAGVTSDLIRLSVG-----IEDVSDIIADLEAALV 423 (432)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHh
Confidence 1 1458999774 3689999999998876
No 246
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.54 E-value=6.7e-12 Score=121.81 Aligned_cols=270 Identities=10% Similarity=0.004 Sum_probs=156.5
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcch-hHHHHHHhCCc------------ceEEEecCCCCCcCHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNS-SVEKSAIIGDV------------PVRQLRSDDNGVLRGD 68 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~-s~~~~~~~~g~------------~v~~v~~~~~~~~d~~ 68 (367)
.||++||.+...++. ...++.+|++.+.+|. +...++...|- .+..++.+ |++
T Consensus 109 ~ai~~a~~~~~~~~~---------~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 174 (401)
T TIGR01885 109 TAIKLARKWGYKVKG---------IPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLE 174 (401)
T ss_pred HHHHHHHHHhhhhcC---------CCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHH
Confidence 367777776432210 0123667777776644 44555554331 23334332 789
Q ss_pred HHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcce
Q psy3048 69 ALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS 144 (367)
Q Consensus 69 ~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 144 (367)
+|++++++.. ....+|++....+++|.+.| +++|.++|++||+++++|++|.+.......+.....++ ..|+
T Consensus 175 ~le~~l~~~~---~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di 250 (401)
T TIGR01885 175 ALEEALEDHG---PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV-KPDI 250 (401)
T ss_pred HHHHHHHhcC---CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC-CCCE
Confidence 9999986432 22346666667778899877 99999999999999999999865332221111111222 3587
Q ss_pred eeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcc
Q psy3048 145 FAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVI 223 (367)
Q Consensus 145 ~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (367)
++++ |.+.++ ..+|+++.+ ++... .+.. .+..
T Consensus 251 ~~~g--K~l~~g~~~ig~v~~~-~~i~~-~~~~--~~~~----------------------------------------- 283 (401)
T TIGR01885 251 VLLG--KALSGGVYPVSAVLAD-DDVML-TIKP--GEHG----------------------------------------- 283 (401)
T ss_pred EEee--ccccCCCCCcEEEEEc-HHHHh-hccC--CCCC-----------------------------------------
Confidence 7765 888754 346666653 23222 1110 0000
Q ss_pred ccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCc--hHHHH
Q psy3048 224 QHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDN--DLTNQ 299 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~--~~~~~ 299 (367)
.+. .+....+....++|+.+..+. +.++..++++++++.|++++ ..++. .+...+..+.+.... ....+
T Consensus 284 --~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~ 356 (401)
T TIGR01885 284 --STY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESKTGRTAWD 356 (401)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCcchhHHHH
Confidence 000 011122344455566554433 44577788999999998873 22221 122233333343211 24578
Q ss_pred HHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 300 LYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 300 l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
+.+.|.++|. ++.+ .+...+|+++ +...+++||++++++|++++
T Consensus 357 l~~~l~~~Gv-~v~~---~~~~~lRi~p-~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 357 LCLKLKEKGL-LAKP---THGNIIRLAP-PLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHhCCE-EEEe---cCCCEEEEeC-CccCCHHHHHHHHHHHHHHh
Confidence 8999998884 4433 2346899965 56788999999999998864
No 247
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=3.2e-12 Score=122.89 Aligned_cols=252 Identities=12% Similarity=0.038 Sum_probs=156.6
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
.|++.+.++......++..|++++.++.++ ++.+|+++|++++++... ..+.+|+++.++||||.+-+.+++.++.+
T Consensus 118 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--~~~k~i~l~~P~NPTG~~~s~~~l~~l~~ 195 (374)
T PRK02610 118 SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN--PPVRVVFVVHPNSPTGNPLTAAELEWLRS 195 (374)
T ss_pred eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 577788899999999999999999999864 489999999999864110 11357888899999999966666555543
Q ss_pred -hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 -EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 -~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
.+|+++++|++|.-+.... .. ..+....+ -+++.+..|.++ .+..+|+++.. +..++........
T Consensus 196 ~~~~~~iI~De~Y~~~~~~~-~~-~~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~~-~~l~~~l~~~~~~--------- 262 (374)
T PRK02610 196 LPEDILVVIDEAYFEFSQTT-LV-GELAQHPN-WVILRTFSKAFRLAAHRVGYAIGH-PELIAVLEKVRLP--------- 262 (374)
T ss_pred ccCCcEEEEeccccccCccc-hH-HHHhcCCC-EEEEEecchhccCcccceeeeecC-HHHHHHHHHhcCC---------
Confidence 1489999999997543211 11 11111111 255678899994 55788888763 3333221110000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
+ .. ..+....+..++.. .+.+.+.+++..+..+.+.+.
T Consensus 263 ------~-------------------------------~~---~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~ 300 (374)
T PRK02610 263 ------Y-------------------------------NL---PSFSQLAAQLALEH--RQELLAAIPEILQERDRLYQA 300 (374)
T ss_pred ------C-------------------------------CC---CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00111111222221 123333334444556777788
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
|++++++.+ .|+..+.++++++. .....++.+.|.++|+. +.+ ..+++|+++. +.+++++++++|++++
T Consensus 301 L~~~~~~~~-~p~~g~f~~~~l~~-~~~~~~~~~~l~~~gi~-v~~----~~~~lRls~~----~~~~~~~~l~~l~~~l 369 (374)
T PRK02610 301 LQELPQLRV-WPSAANFLYLRLSQ-DAALAALHQALKAQGTL-VRH----TGGGLRITIG----TPEENQRTLERLQAAL 369 (374)
T ss_pred HHhCCCcEe-CCCcceEEEEeCCC-CCCHHHHHHHHHHCCEE-EEe----CCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 887778765 35556666666654 22356888888888854 322 2458999764 3577899999999887
Q ss_pred HHh
Q psy3048 349 SEM 351 (367)
Q Consensus 349 ~~~ 351 (367)
+++
T Consensus 370 ~~~ 372 (374)
T PRK02610 370 TQL 372 (374)
T ss_pred hhc
Confidence 654
No 248
>PRK03321 putative aminotransferase; Provisional
Probab=99.54 E-value=6.8e-13 Score=126.47 Aligned_cols=245 Identities=9% Similarity=-0.031 Sum_probs=154.0
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++...+......++..|++++.++.++++.+|++++++++++.+ .+|++++++|++|.+-|.++|.++|+
T Consensus 99 d~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 99 DEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred CEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 345556666666666777889999999987668899999999987644 37778899999999999999999999
Q ss_pred h--cCcEEEEecccccccccCh---hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 111 E--YNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 111 ~--~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
. +|+++++|++|+.+.+... .... .....+ -+++.+..|.++.| ..+|+++.. ++........ . .
T Consensus 173 ~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~-vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~---~--~- 243 (352)
T PRK03321 173 AVPADVLVVLDEAYVEYVRDDDVPDGLEL-VRDHPN-VVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKV---A--V- 243 (352)
T ss_pred hCCCCeEEEEechHHHhccCcCCCcHHHH-HhhCCC-EEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHh---c--C-
Confidence 7 6999999999976543211 1111 111111 24555789998743 457887764 3333221100 0 0
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~ 263 (367)
.+ + ...+...+++..+ ..+.+.+..++..+..+
T Consensus 244 ---------~~-------------------------------~------~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~ 277 (352)
T PRK03321 244 ---------PF-------------------------------S------VNSLAQAAAIASLAAEDELLERVDAVVAERD 277 (352)
T ss_pred ---------CC-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 00 0 0112222222222 12233444455555566
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
++.+.|++. |+.+. ++..+.+.+++.. ...++.+.|.++|+ .+.+ + +..++|+++. +.+++++++++
T Consensus 278 ~~~~~L~~~-~~~~~-~~~g~~i~i~l~~---~~~~~~~~l~~~gI-~v~~--~-~~~~iRi~~~----~~~~~~~~~~a 344 (352)
T PRK03321 278 RVRAALRAA-GWTVP-PSQANFVWLPLGE---RTADFAAAAAEAGV-VVRP--F-AGEGVRVTIG----APEENDAFLRA 344 (352)
T ss_pred HHHHHHHHC-CCccC-CCCCCEEEEeCCC---CHHHHHHHHHHCCE-EEEc--c-CCCcEEEeeC----CHHHHHHHHHH
Confidence 788888776 66543 3444555665532 25678888888884 4443 2 3346999753 68999999999
Q ss_pred HHHHHH
Q psy3048 344 ISHQSS 349 (367)
Q Consensus 344 l~~~~~ 349 (367)
|+++.+
T Consensus 345 l~~~~~ 350 (352)
T PRK03321 345 ARAWRA 350 (352)
T ss_pred HHHHhc
Confidence 998743
No 249
>KOG3846|consensus
Probab=99.54 E-value=5.7e-13 Score=118.48 Aligned_cols=276 Identities=12% Similarity=0.143 Sum_probs=185.0
Q ss_pred CcchhHHHHHHhCCcce----EEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc
Q psy3048 38 QSNSSVEKSAIIGDVPV----RQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY 112 (367)
Q Consensus 38 ~~H~s~~~~~~~~g~~v----~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~ 112 (367)
+.||+++..+++.|..+ +.+.+.+ .-.+..+++...|+++. ....+|+++....+||+..||.+|...-+..
T Consensus 167 SDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng---DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~k 243 (465)
T KOG3846|consen 167 SDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG---DEIALVCFSGVQYYTGQYFDIGAITFAGQFK 243 (465)
T ss_pred chHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC---CeEEEEEeecceeecccccchhhhhhcccCC
Confidence 46888888899999854 4455444 36788888888887654 3457899999999999999999999888889
Q ss_pred CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCC
Q psy3048 113 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQ 191 (367)
Q Consensus 113 gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 191 (367)
|+++-.|-||+.+..+...+.| |+ |+.+|++.|+++++ .|+|.+++.++. .......-.++..+...
T Consensus 244 gc~VGfDLAHAvgNVpL~LHdW---gV---DFACWCSYKYlnaGaGgIgGlFvHekh-~~~~~prl~GWwgh~~s----- 311 (465)
T KOG3846|consen 244 GCLVGFDLAHAVGNVPLQLHDW---GV---DFACWCSYKYLNAGAGGIGGLFVHEKH-TKESLPRLAGWWGHDPS----- 311 (465)
T ss_pred CcEechhhhhhhcCCceEEeec---CC---ceEEEeeecccccCCCccceeeeehhh-hcchhhHHhhhccCCcc-----
Confidence 9999999999988877655554 55 99999999999886 557777775432 22211222233322211
Q ss_pred CCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3048 192 SPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK 271 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~ 271 (367)
..| ....-++ ..+|+ -.|-....+-....++..+|..+.+-.+.+..+|..-+..|+.-.++.
T Consensus 312 -~RF-----------~Mdnvl~--lipGa---~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~ 374 (465)
T KOG3846|consen 312 -KRF-----------QMDNVLE--LIPGA---LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA 374 (465)
T ss_pred -hhh-----------hhccccc--cCccc---cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH
Confidence 111 0001111 12222 112222222234467778888888888999999999999888777765
Q ss_pred CCC-----------eEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHH
Q psy3048 272 DDR-----------FELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 272 ~~g-----------~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ed 336 (367)
..| +.++.|. +--.+++.+.- .+..+++.|.++|.+ ..-+.++.+|+++...||+-.|
T Consensus 375 ~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~krGv~----~DkR~PNvIRvAPvpLYN~f~D 447 (465)
T KOG3846|consen 375 SKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELHKRGVI----GDKRRPNVIRVAPVPLYNTFSD 447 (465)
T ss_pred hcccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHHHcCee----ccccCCCceEeecchhhccHHH
Confidence 433 3344442 11122222211 146788888889943 3345678999999889999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy3048 337 VAFAWNEISHQSSEMN 352 (367)
Q Consensus 337 id~li~~l~~~~~~~~ 352 (367)
|-+++++|.++...+.
T Consensus 448 vy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 448 VYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987654
No 250
>PRK09148 aminotransferase; Validated
Probab=99.54 E-value=1.1e-12 Score=127.31 Aligned_cols=266 Identities=12% Similarity=0.059 Sum_probs=159.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh---hhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL---EELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl---~~I~~ 107 (367)
-.|++++.++..+...+...|++++.++.+.++. .+++++++++.... .+.++++++|+|+||.+.+. ++|.+
T Consensus 117 d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~~---~~~~v~l~~P~NPtG~~~s~~~l~~l~~ 192 (405)
T PRK09148 117 DVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSIP---KPIALIVNYPSNPTAYVADLDFYKDVVA 192 (405)
T ss_pred CEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhccc---cceEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 3466677888888888888999999999864432 34556666543211 13588899999999999765 67888
Q ss_pred HHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
+|++||+++++|++|+.+.+....... .+.+.....+++.+..|.++.| ..+|+++. ++..+... .....+....
T Consensus 193 ~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l-~~~~~~~~~~ 270 (405)
T PRK09148 193 FAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAAL-TRVKSYLDYG 270 (405)
T ss_pred HHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHHHH-HHHHHHhccC
Confidence 999999999999999765432111110 0111111235578889998744 66888875 33333221 1000110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. .......+...++. ....+++..++..+..++
T Consensus 271 -------------------------------------------~---~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~ 303 (405)
T PRK09148 271 -------------------------------------------A---FTPIQVAATAALNG-PQDCIAEMRELYKKRRDV 303 (405)
T ss_pred -------------------------------------------C---ChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHH
Confidence 0 00011111222221 234456666777888888
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCC--chHHHHHHHHHh-ccCcEEEEEe-EEC--CeeEEEEEecCCCCCHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGD--NDLTNQLYERLM-SHKQIYIIKA-SFQ--GRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--~~~~~~l~~~L~-~~g~~~~~~~-~~~--~~~~lRi~~~~~~~~~edid 338 (367)
+.+.|+++ |+.+..|.....++++++.. .....++.+.|. +.|+ .+.++ .+. +..++|+++. .++++++
T Consensus 304 l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV-~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~ 378 (405)
T PRK09148 304 LVESFGRA-GWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADV-AVAPGVGFGEHGDGYVRIALV---ENEQRIR 378 (405)
T ss_pred HHHHHHHc-CCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCE-EEeCchhhCCCCCCeEEEEec---CCHHHHH
Confidence 88888886 66544343434555565431 112357777766 5674 44443 222 2469999764 3688999
Q ss_pred HHHHHHHHHHHHhhCC
Q psy3048 339 FAWNEISHQSSEMNLP 354 (367)
Q Consensus 339 ~li~~l~~~~~~~~~~ 354 (367)
..++.|.++++++.+-
T Consensus 379 ~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 379 QAARNIKRFLSSADET 394 (405)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888876543
No 251
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.54 E-value=4.5e-13 Score=127.08 Aligned_cols=243 Identities=13% Similarity=0.100 Sum_probs=137.5
Q ss_pred CceEEE--ecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChh
Q psy3048 29 SRLVAY--ASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 29 ~~~~v~--~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
++.+++ .+..+|.++..+++..|+++..+ + +++++++ . +. +.+|+++ +.+++|.+ .||+
T Consensus 95 gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--~-----~l~~l~~-~-~~------~~lIiit-g~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 95 GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--D-----ELSELKK-I-DG------TSLVVIT-GSTMDLKVVSEEDLK 158 (346)
T ss_pred CCEEEECCCCCCCchhHHHHHHHcCCEEecc--C-----CHHHHhh-C-cC------ceEEEEE-CCCCCCcccCHHHHH
Confidence 355554 33679999999999999876332 1 4555432 1 11 2355554 56889998 7999
Q ss_pred hHHHHHhhcCcEEEEecccccccccC-hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+|+++|++||+++++|+||+.+.... +....... .+|+++.+.+|++.++. .|+++.+ ++.++.......+|..
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~---~~divv~s~SKalaG~r-~G~v~~~-~~li~~l~~~~~~~~~ 233 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDL---GADLVVTSTDKLMDGPR-GGLLAGR-KELVDKIKSVGEQFGL 233 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCCCHHHc---CCcEEEeccchhccccc-eEEEEeC-HHHHHHHHHhhcCccc
Confidence 99999999999999999998754321 11110011 24888999999775553 5776654 3333332222222221
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. ...+.+.+..++|+... .+...+...+..
T Consensus 234 s-----------------------------------------------~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~ 263 (346)
T TIGR03576 234 E-----------------------------------------------AQAPLLAAVVRALEEFE---LSRIRDAFKRKE 263 (346)
T ss_pred C-----------------------------------------------ccHHHHHHHHHHHhhcc---HHHHHHHHHHHH
Confidence 1 00011223334444322 234445556666
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EEC-CeeEEEEEecCCCCCHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQ-GRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~-~~~~lRi~~~~~~~~~edid~l 340 (367)
+++.+.++.+ .+. ++..+.+.+++++.+ ..+...+.|.++|+ .+.+. .+. ..+++||++....-+..+.+++
T Consensus 264 ~~~~~~l~~~---~~~-~~~~~f~~~~~~~~~-~~~~~~~ll~~~gV-~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~ 337 (346)
T TIGR03576 264 EVYLRLFDKL---NVE-RTPTGFVIKGVEEEK-LIEIGLDLLRNYGI-ITITAVGMPGASKTLRFDLAAKDAERIGDDYL 337 (346)
T ss_pred HHHHHHHHhC---CCC-cCCCeEEEEeCCCCC-HHHHHHHHHHhCCE-EEeCCcccCCCCCeEEEEEecChHHhcCHHHH
Confidence 6666666643 332 334555666664311 12344445556664 44443 222 2569999876432122379999
Q ss_pred HHHHHHHH
Q psy3048 341 WNEISHQS 348 (367)
Q Consensus 341 i~~l~~~~ 348 (367)
+++|++-+
T Consensus 338 ~~al~~~~ 345 (346)
T TIGR03576 338 VEAVKDSL 345 (346)
T ss_pred HHHHHhcc
Confidence 99998753
No 252
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.53 E-value=1.1e-12 Score=127.45 Aligned_cols=257 Identities=15% Similarity=0.119 Sum_probs=157.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++.+.++......++..|++++.++.. +++.+|++.++++++.... ...+++++.++||||.+ +.+++
T Consensus 124 Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG~~~s~~~~~~ 200 (404)
T PTZ00376 124 GTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTGVDPTEEQWKE 200 (404)
T ss_pred CCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 3467778889999999999999999999983 3589999999999864321 12578889999999998 56788
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhh--hhCCCCCcceeeeccccccc-cCCcceeEE--EecchhhhhhccCC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMW--VKNANHLTNTFFTD 177 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~--~~~~~~~~~~~~~~ 177 (367)
|+++|++||+++++|++|....+... .... .+.....--+++.+..|.++ .+..+|+++ +.+++..+.....-
T Consensus 201 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~ 280 (404)
T PTZ00376 201 IADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQL 280 (404)
T ss_pred HHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHH
Confidence 88899999999999999976544210 1100 01111101266677899998 568899985 33443222111000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH--------H
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL--------K 249 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~ 249 (367)
..+.... +. +. ..+...++...+.. +
T Consensus 281 ~~~~~~~-----------------------------------------~~--~~---~~~~q~~~~~~l~~~~~~~~~~~ 314 (404)
T PTZ00376 281 KLIIRPM-----------------------------------------YS--SP---PIHGARIADRILSDPELRAEWLS 314 (404)
T ss_pred HHHHhhh-----------------------------------------cC--CC---chHHHHHHHHHhCCHHHHHHHHH
Confidence 0000000 00 00 01122222222211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEE
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFV 326 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~ 326 (367)
.+++..++..+..+.+.+.|+++. ++.... |..+...+ +.- +.+++++|.++..+++.++ + |++
T Consensus 315 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-p~gg~f~~-~~~----~~~~~~~L~~~~~v~v~p~-----~--Ris 381 (404)
T PTZ00376 315 ELKEMSGRIQNMRQLLYDELKALGSPGDWEHII-NQIGMFSF-TGL----TKEQVERLIEKYHIYLLDN-----G--RIS 381 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-cCceEEEe-cCC----CHHHHHHHHHhCCEeecCC-----C--eEE
Confidence 234445566778888888888762 243333 33333322 221 3577888888844565443 1 998
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~~ 350 (367)
++. .+.++++.++++|++++..
T Consensus 382 ~~~--~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 382 VAG--LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred Eec--cCHHhHHHHHHHHHHHHhc
Confidence 743 5789999999999998653
No 253
>PRK04311 selenocysteine synthase; Provisional
Probab=99.52 E-value=2.5e-12 Score=125.79 Aligned_cols=126 Identities=13% Similarity=0.014 Sum_probs=90.4
Q ss_pred CceEEEecCCcchh------HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCc--cc--c
Q psy3048 29 SRLVAYASDQSNSS------VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTG--TC--A 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s------~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~--~G--~ 98 (367)
+.-.|++|+..|++ +...+...|+++++|+.+ ...++++++++++++|+ +|++++.+|+ +| .
T Consensus 164 ~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~ 235 (464)
T PRK04311 164 AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTK 235 (464)
T ss_pred CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCe------EEEEEcCCCccccccCC
Confidence 34467778777773 234556689999999763 34589999999988774 7788888876 45 5
Q ss_pred cCChhhHHHHHhhcCcEEEEeccccccc----cc--Chh--hhhhhCCCCCcceeeeccccccccCCcceeEEEec
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYAGSA----LL--LPE--YAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~~~~----~~--~~~--~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
..|+++|+++||+||+++++|+++|... +. ... ...... .+|++++|+|||+++| ++|+++.++
T Consensus 236 ~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~---GaDiv~fSg~K~LgGp-~~G~i~g~~ 307 (464)
T PRK04311 236 EVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAA---GVDLVTFSGDKLLGGP-QAGIIVGKK 307 (464)
T ss_pred cCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhc---CCcEEEecCcccccCC-ceEEEEEcH
Confidence 6799999999999999999999654321 10 000 111112 4699999999999988 578888754
No 254
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.52 E-value=1e-12 Score=127.86 Aligned_cols=274 Identities=15% Similarity=0.170 Sum_probs=156.2
Q ss_pred EEEecCCcchhH----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..|.+. ...+...|+++++++.+ |++++++++++.+ .+|++.+++|++|.+.|+++|++
T Consensus 98 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~t------~~V~le~p~NPtg~v~dl~~I~~ 166 (418)
T TIGR01326 98 NIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-----DPEEFEKAIDENT------KAVFAETIGNPAINVPDIEAIAE 166 (418)
T ss_pred EEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHH
Confidence 455566666443 34456689999998753 8999999997655 47778899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+||++|+++++|++++.+.... ... . .+|+++.+.+|+++++ ...|++++......... . ....+.....
T Consensus 167 la~~~~i~livD~t~~~~~~~~-~l~---~---g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~-~-~~~~~~~~~~ 237 (418)
T TIGR01326 167 VAHAHGVPLIVDNTFATPYLCR-PID---H---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWAN-G-RFPLFTTPDP 237 (418)
T ss_pred HHHHcCCEEEEECCCchhhcCC-chh---c---CCeEEEECccccccCCccceEEEEEecccccccc-c-ccccccCCCC
Confidence 9999999999999997653221 111 1 3599999999999864 33677777443211100 0 0000000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.+..- .... .++....++... ..+....+....+...| +...+...+..++++..+.+..+.
T Consensus 238 ---~q~a~---~~~~--~~~~~~~~~~~~--------~~~~~~~G~~~~p~~a~--~~~~~l~tl~~R~~~~~~~a~~la 299 (418)
T TIGR01326 238 ---SYHGL---VFTE--TFGNPAFIVKAR--------VQLLRDLGAALSPFNAF--LLLQGLETLSLRMERHVENALKVA 299 (418)
T ss_pred ---ccccc---hhhh--hhchhhHHHHHH--------HHHHHhcCCCCCHHHHH--HHHCCcccHHHHHHHHHHHHHHHH
Confidence 00000 0000 000000000000 00000011112223333 333455667777788888899999
Q ss_pred HHhcCCCCeEEeC-C-----C------------CceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEe--E-
Q psy3048 267 DLVEKDDRFELVC-P-----P------------SMGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKA--S- 316 (367)
Q Consensus 267 ~~L~~~~g~~~~~-~-----~------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~--~- 316 (367)
+.|.++|++..+. | | ..++++|.+.+......+++++|.--.. +...|. .
T Consensus 300 ~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h 379 (418)
T TIGR01326 300 EFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTH 379 (418)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCc
Confidence 9999999876443 2 1 1358899986533334566666542110 011111 0
Q ss_pred --E-------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 317 --F-------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 317 --~-------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
. . .++.+|+|+. -||++.+++.|++.+
T Consensus 380 ~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~Al 417 (418)
T TIGR01326 380 QQLSEEEQLKAGVTPGLIRLSVG-----IENIDDIIADLEQAL 417 (418)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHhh
Confidence 0 1 1458999874 367888888888765
No 255
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.51 E-value=1.1e-12 Score=125.71 Aligned_cols=246 Identities=12% Similarity=0.087 Sum_probs=156.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH--
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI-- 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l-- 108 (367)
-.|++++.++..+...+...|++++.|+.+ ++.+|+++|++++++.+ .++++++++|+||.+-+.+++.++
T Consensus 106 d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~ 178 (366)
T PRK01533 106 DNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIE 178 (366)
T ss_pred CEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 356777888888888899999999999985 45799999999886654 377788999999999776555555
Q ss_pred -HhhcCcEEEEecccccccccChhhhhhhCCCC--Ccceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 109 -CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE--YVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 109 -~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~--~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|++++ ++++|++|..+....+ .......+. .--+++.+..|.++ .+..+|+++.. ++.+.........
T Consensus 179 ~~~~~~-~~iiDe~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~~~l~~~~~~----- 250 (366)
T PRK01533 179 GISENT-LIVIDEAYYEYVTAKD-FPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELIEKLNVVRLP----- 250 (366)
T ss_pred hCCCCC-EEEEEccHHHhhcccc-CcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHHHHHHHhcCC-----
Confidence 55555 6778999864332110 000011111 11366777899987 44677887653 3333221110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAK 263 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~ 263 (367)
+ . ...+...++...+. .+..++..+...+..+
T Consensus 251 ----------~-------------------------------~------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~ 283 (366)
T PRK01533 251 ----------F-------------------------------N------VSSLAQKAATIAFGDDEFIEEIVRVNTEGLR 283 (366)
T ss_pred ----------C-------------------------------C------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 0 0 01123333333332 2334555556667777
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
++.+.++.+ |+++. +++.+.+.+++++ ..++.+.|.++|+. +.+ + ..++||++. +.++.++|+++
T Consensus 284 ~~~~~l~~~-g~~~~-~~~~nf~~~~~~~----~~~~~~~l~~~GI~-Vr~--~--~~~iRis~~----~~~~~~~l~~a 348 (366)
T PRK01533 284 QYESFCKEN-EIPFY-QSQTNFIFLPVEN----GGEIYEACAHAGFI-IRP--F--PNGVRITVG----TREQNEGVISV 348 (366)
T ss_pred HHHHHHHhC-CCccC-CCcCcEEEEeCCC----HHHHHHHHHHCCcE-Ecc--C--CCceEEeCC----CHHHHHHHHHH
Confidence 777778776 77654 4566777776642 46788889989854 333 1 358999764 58999999999
Q ss_pred HHHHHHHhhC
Q psy3048 344 ISHQSSEMNL 353 (367)
Q Consensus 344 l~~~~~~~~~ 353 (367)
|+++.+...+
T Consensus 349 l~~~~~~~~~ 358 (366)
T PRK01533 349 LQQHFENKKR 358 (366)
T ss_pred HHHHHHhccc
Confidence 9998765433
No 256
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.51 E-value=1.4e-12 Score=123.12 Aligned_cols=212 Identities=12% Similarity=-0.074 Sum_probs=146.1
Q ss_pred EEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEE
Q psy3048 85 CCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWV 164 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~ 164 (367)
..|.+++..|.+|+..| ++.+.+++++++|++.+.+..+.+- ++.|++..+++|.++ |+|++++++
T Consensus 145 ~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~--------~~~dvi~agsQKnlg-P~Gltvviv 210 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDV--------EAYGMVYAHAQKNLG-PAGVTVAII 210 (364)
T ss_pred cEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCCh--------HHccEEEeeccccCC-CCceEEEEE
Confidence 47999999999999986 4444579999999987776655432 233999999999998 999999998
Q ss_pred ecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHH
Q psy3048 165 KNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLR 244 (367)
Q Consensus 165 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (367)
+++. +++.....+.|+.-... .. ...+....+-+..+.+..+++
T Consensus 211 s~~a-l~~~~~~~p~~ldy~~~--------------~~---------------------~~s~~nTPpv~~iy~l~~~l~ 254 (364)
T PRK12462 211 RRAL-LERVPDTLPPMLDFRTH--------------VE---------------------HRSNYNTPPVFAIYVMALVLR 254 (364)
T ss_pred CHHH-HhhccccCCchhhHHHH--------------Hh---------------------cCCCCCCchHHHHHHHHHHHH
Confidence 7643 43322111222211000 00 000001111233456667788
Q ss_pred HhhHH--HHHHHHHHHHHHHHHHHHHhcCCCCeEEeC-C---CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC
Q psy3048 245 SYGLK--GLQAYLRKHISLAKKFADLVEKDDRFELVC-P---PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ 318 (367)
Q Consensus 245 ~~~~~--g~~~~~~~~~~la~~l~~~L~~~~g~~~~~-~---~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 318 (367)
.+.++ |++++.+++++.++.+++.+.+.+||.... . .....|+|++.+ .....++.+...++|.+.+.+ ++
T Consensus 255 ~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~-~~l~~~f~~~a~~~gl~~lkG--hr 331 (364)
T PRK12462 255 WIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ-PRLDTLFKEQSTEAGFCGLSG--HR 331 (364)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC-HHHHHHHHHHHHHCCCccccC--Cc
Confidence 77777 999999999999999999999998776543 2 245677888865 566778888888899554422 22
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.-+.+|+|. ..-.+.|+++.|++-++++.++
T Consensus 332 ~vgg~Ras~-yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 332 SIGGIRASL-YNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ccCceEEEc-CCCCCHHHHHHHHHHHHHHHHh
Confidence 234599965 5667899999999999998654
No 257
>PLN02672 methionine S-methyltransferase
Probab=99.51 E-value=2.3e-12 Score=135.21 Aligned_cols=260 Identities=13% Similarity=0.117 Sum_probs=162.1
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCC-Cccccc---CChhh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGT-TGTCAF---DNLEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~-t~~G~i---~dl~~ 104 (367)
-.|++...++..+...++..|++++.++++ +++.+|+++|++++++..+ ..++++.|+ ||||.+ +.+++
T Consensus 779 D~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~-----~~I~L~nPnhNPTG~v~S~eeLe~ 853 (1082)
T PLN02672 779 GTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKK-----PWVYISGPTINPTGLLYSNSEIEE 853 (1082)
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC-----CEEEEECcCCCCcCccCCHHHHHH
Confidence 456667789999999999999999999986 3689999999999865321 267788887 999998 57788
Q ss_pred HHHHHhhcCcEEEEecccccccccChh-----hhhhhCCCC---C--cceeeeccc-cccccCCcceeEEEecchhhhhh
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPE-----YAHLKRGLE---Y--VDSFAFNAH-KWLLTNHDCSAMWVKNANHLTNT 173 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~-----~~~~~~~~~---~--~D~~~~~~h-K~l~~p~g~g~l~~~~~~~~~~~ 173 (367)
|+++|++||+++++|++|+...+.... ......... . .-++..+.. |++.++..+|+++..++......
T Consensus 854 Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l 933 (1082)
T PLN02672 854 ILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAF 933 (1082)
T ss_pred HHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHH
Confidence 888999999999999999865543211 111110010 0 123444666 55555588999887544333322
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh------
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG------ 247 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------ 247 (367)
... ..+. . .+ . ...+.+.+.+..+.
T Consensus 934 ~~~-~~~s-~----------~~-------------------------------~------~~q~Aaaaalall~~~~~~~ 964 (1082)
T PLN02672 934 HSA-PGLS-R----------PH-------------------------------S------TLKYTIKKLLGLKNQKSSDL 964 (1082)
T ss_pred HHh-hhhc-C----------CC-------------------------------c------HHHHHHHHHHHHHhccCcHH
Confidence 110 0000 0 00 0 01122222222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeE-EEEEcC----------C------chHHHHHHHHHhccCcE
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLV-CFRLKG----------D------NDLTNQLYERLMSHKQI 310 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v-~f~~~~----------~------~~~~~~l~~~L~~~g~~ 310 (367)
.+.+.+..+...+..+++.+.|++. |+.+.. |+.+.+ +..+.. . .....++.+.|.++..+
T Consensus 965 ~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~-PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GV 1042 (1082)
T PLN02672 965 LDGVAEQKKILKSRAERLKETLEAC-GWDVLE-PQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGL 1042 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEec-CCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCE
Confidence 2345566666788888899999887 787654 433433 333210 0 11356788888877435
Q ss_pred EEEEeEE-CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 311 YIIKASF-QGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 311 ~~~~~~~-~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.+.++.+ ..++++|+++.. ++++++++++.|+++.+
T Consensus 1043 aV~PGs~FG~~g~~RIsfa~---~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1043 CINSSSWTGIPGYCRFSFAL---EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EEecCcccCCCCeEEEEecC---CHHHHHHHHHHHHHHHH
Confidence 5555544 336799998753 68899999999998754
No 258
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.51 E-value=3.4e-12 Score=122.09 Aligned_cols=243 Identities=20% Similarity=0.266 Sum_probs=155.7
Q ss_pred EEecCCcchhHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 33 AYASDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 33 v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
|++++..+......++ ..|+++.+++.. |+++|++++++++ .+|.+..++|++..+.||++|+++
T Consensus 97 iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~-----d~~~l~~~l~~~t------~~v~~EspsNP~l~v~Dl~~i~~~ 165 (386)
T PF01053_consen 97 IVASDDLYGGTYRLLEELLPRFGVEVTFVDPT-----DLEALEAALRPNT------KLVFLESPSNPTLEVPDLEAIAKL 165 (386)
T ss_dssp EEEESSSSHHHHHHHHHCHHHTTSEEEEESTT-----SHHHHHHHHCTTE------EEEEEESSBTTTTB---HHHHHHH
T ss_pred eEecCCccCcchhhhhhhhcccCcEEEEeCch-----hHHHHHhhccccc------eEEEEEcCCCcccccccHHHHHHH
Confidence 5555666666655544 369999998764 8999999999977 489999999999999999999999
Q ss_pred HhhcC-cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCC
Q psy3048 109 CQEYN-IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 109 ~~~~g-i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
||++| ++++||.+.+...+. .+.. .| +|+++.|..|++++... .|.+++++...+...+.. +
T Consensus 166 a~~~g~~~~vVDnT~atp~~~-~pL~---~G---aDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~---~----- 230 (386)
T PF01053_consen 166 AKEHGDILVVVDNTFATPYNQ-NPLE---LG---ADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLRE---F----- 230 (386)
T ss_dssp HHHTTT-EEEEECTTTHTTTC--GGG---GT----SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHH---H-----
T ss_pred HHHhCCceEEeeccccceeee-ccCc---CC---ceEEEeeccccccCCcceeeEEEEECchhhhhhhhcc---h-----
Confidence 99998 999999998776443 2222 13 59999999999986532 455555542222211100 0
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
....+....+...|..+ .|..-+.-++++..+++..+
T Consensus 231 -----------------------------------------~~~~G~~~~p~da~ll~--rgl~Tl~~R~~~~~~nA~~l 267 (386)
T PF01053_consen 231 -----------------------------------------RRLLGATLSPFDAWLLL--RGLRTLPLRMERQNENAEAL 267 (386)
T ss_dssp -----------------------------------------HHHHT-B--HHHHHHHH--HHHTTHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------hhhcCccchHHHHHHHh--cCCCcHHHHHHHHHHHHHHH
Confidence 00001112234444433 46777888999999999999
Q ss_pred HHHhcCCCCeE-EeCC-----C-----------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEeE--E
Q psy3048 266 ADLVEKDDRFE-LVCP-----P-----------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKAS--F 317 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~-----~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~~--~ 317 (367)
.+.|+++|.++ |..| | ..++++|.+.+.......+.+.|.-- + .+...|.. +
T Consensus 268 A~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h 347 (386)
T PF01053_consen 268 AEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSH 347 (386)
T ss_dssp HHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTT
T ss_pred HHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhh
Confidence 99999999886 5544 1 34799999987333456777776421 1 11111110 0
Q ss_pred ----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 ----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
. .+..+|+|+. -||.+.+++.|++.+|
T Consensus 348 ~~~~~e~~~~~Gi~~~liRlSvG-----lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 348 RSLSPEERAEAGISDGLIRLSVG-----LEDPDDLIADLEQALE 386 (386)
T ss_dssp TTSCHHHHHHTTS-TTEEEEE-------SS-HHHHHHHHHHHHH
T ss_pred ccCChhhhhccCCCCCeeEEEec-----cCCHHHHHHHHHHhcC
Confidence 0 1458999774 3789999999998865
No 259
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.51 E-value=8.4e-12 Score=120.88 Aligned_cols=270 Identities=14% Similarity=0.106 Sum_probs=156.8
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc------------ceEEEecCCCCCcCHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV------------PVRQLRSDDNGVLRGDA 69 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~------------~v~~v~~~~~~~~d~~~ 69 (367)
.||++||.+...+. ++ .++.+|..+...|-+...+....+. .+..++.+ |+++
T Consensus 107 ~Alk~ar~~~~~~~---~~-------~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~ 171 (397)
T TIGR03246 107 AALKLARRYALDKH---GA-------DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAA 171 (397)
T ss_pred HHHHHHHHHHHhcC---CC-------CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHH
Confidence 47888888755331 11 1245566667778777666555442 22334332 8899
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCccee
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSF 145 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 145 (367)
|++++++.+ .+|++....+..|.+ .++++|.++|++||+++++|++|.+......-+.....++ ..|++
T Consensus 172 l~~~l~~~~------aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~ 244 (397)
T TIGR03246 172 AKALISDKT------CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDIL 244 (397)
T ss_pred HHHHhccCe------EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEE
Confidence 999986543 466666555555644 4599999999999999999999965422211111111233 35776
Q ss_pred eeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccc
Q psy3048 146 AFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQH 225 (367)
Q Consensus 146 ~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (367)
+ ..|.+++...+|+++.++. +...+.. ... .
T Consensus 245 t--~~K~lggG~pigav~~~~~--i~~~~~~-------~~~-----~--------------------------------- 275 (397)
T TIGR03246 245 T--SAKALGGGFPIGAMLTTTE--IAAHLKV-------GTH-----G--------------------------------- 275 (397)
T ss_pred E--eehhhhCCcceeEEEEcHH--HHHhccC-------CCc-----C---------------------------------
Confidence 4 4788865556777777432 2222210 000 0
Q ss_pred ccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC-chHHHHHH
Q psy3048 226 WQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD-NDLTNQLY 301 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~-~~~~~~l~ 301 (367)
.+. .+......+..+++..+.. .++.++.+++.+++.++|+++. .+.++.. +.. .++.+.+... ......+.
T Consensus 276 ~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~ 351 (397)
T TIGR03246 276 TTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFV 351 (397)
T ss_pred CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHH
Confidence 000 0111122333444444322 4566788888999999887752 1222211 112 2333333221 13456888
Q ss_pred HHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 302 ERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 302 ~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.|.++|.+.. + .+.+++|+++ +...+++||+.++++|++.++++
T Consensus 352 ~~l~~~Gv~~~-~---~g~~~lR~~p-~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 352 NAAAEEGVIAL-I---AGPNVVRFAP-SLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred HHHHHCCeEEe-e---cCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 89999995532 2 2446899965 56678999999999999988753
No 260
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.50 E-value=7e-12 Score=116.65 Aligned_cols=269 Identities=13% Similarity=0.069 Sum_probs=165.1
Q ss_pred ceEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc-ccCChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC-AFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G-~i~dl~~ 104 (367)
+-.++++...|+......+. .|.+++.++.+ |.++|+++.+.++ ..+++.+|++ .| ...|+.+
T Consensus 164 ~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~~~~~~------~gv~vQyP~~-~G~~~~d~~~ 231 (450)
T COG0403 164 RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESADDGDV------FGVLVQYPNT-FGIVEEDLRA 231 (450)
T ss_pred CceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhccccCe------EEEEEecCCC-CCccchhHHH
Confidence 56788899999999888764 46777777765 8888888822243 4788898865 77 6678999
Q ss_pred HHHHHhhcCcEEEEecc-cccccccChhhhhhhCCCCCcceeeecccccc----ccCCcceeEEEecchhhhhhccCCcc
Q psy3048 105 LGPICQEYNIWLHVDAA-YAGSALLLPEYAHLKRGLEYVDSFAFNAHKWL----LTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a-~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l----~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
|.+.+|++|.+++|=.= .+.+.+ -++.. =.+|+++.+++.++ +++|.+|++.++++ +.+.+ ...
T Consensus 232 l~~~~h~~~al~~v~aDplaL~LL-~pPGe------~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~--~~R~m--PGR 300 (450)
T COG0403 232 LIEAAHSAGALVIVAADPLALGLL-KPPGE------FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDE--FKRQM--PGR 300 (450)
T ss_pred HHHHHhhcCCEEEEEechhHhhcc-CCccc------cCCceEEecCcccCCCcCCCCcceeeeeEhHh--HhhcC--CCc
Confidence 99999999998776541 122222 22222 14599999998862 33456777777543 22211 111
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcc---ccccccccccc-cHHHHHHHHHHhhHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVI---QHWQTPLSRRF-RALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~~ 255 (367)
.++..... ...+.|++. +.. -.++| +.-...|++.. .+....+++-.+|.+|+.++.
T Consensus 301 lVG~S~D~--~G~~A~rLa-------------LQT----REQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA 361 (450)
T COG0403 301 LVGVSVDA--AGKRAFRLA-------------LQT----REQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIA 361 (450)
T ss_pred eeeeeecC--CCCchhhhh-------------HHH----HHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 11111100 111222110 000 00011 00112222211 223333445568999999999
Q ss_pred HHHHHHHHHHHHHhcCCC-CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCH
Q psy3048 256 RKHISLAKKFADLVEKDD-RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~-g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ 334 (367)
++.++++.++.++|+++. |+++.....+..+.++++. .....+.++.+..|. -+... .. ..+=+++ .-.+++
T Consensus 362 ~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~--~~~~~l~~~~~~~G~-~L~~~--~~-~~~~ia~-tEt~t~ 434 (450)
T COG0403 362 ERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE--EVAEALLAAAIAGGI-NLRRV--DA-DTVLIAL-TETTTK 434 (450)
T ss_pred HHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch--hHHHHHHHHHHhcCC-ceeee--cC-CceEEEe-ecccCH
Confidence 999999999999999764 6998877788888888753 456677777777773 22211 11 1344544 456779
Q ss_pred HHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQ 347 (367)
Q Consensus 335 edid~li~~l~~~ 347 (367)
+||+.+++++...
T Consensus 435 ~~i~~l~~~~~~~ 447 (450)
T COG0403 435 EDIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998764
No 261
>PLN02624 ornithine-delta-aminotransferase
Probab=99.50 E-value=3.3e-11 Score=119.07 Aligned_cols=227 Identities=13% Similarity=0.015 Sum_probs=133.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|++.|++.++.. +....+|++..+.+++|.+.| +++|.++|++||+++++|++|.+.......+.....++ .
T Consensus 210 d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~ 285 (474)
T PLN02624 210 DLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-R 285 (474)
T ss_pred CHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-C
Confidence 789999988642 223467888888889999877 99999999999999999999985432221111111233 3
Q ss_pred cceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++++ |.++++ ..+|+++.++ +.... +. +.. ..
T Consensus 286 pDiv~ls--K~lggG~~pigav~~~~-~i~~~-~~--~~~--~~------------------------------------ 321 (474)
T PLN02624 286 PDVVILG--KALGGGVIPVSAVLADK-DVMLC-IK--PGE--HG------------------------------------ 321 (474)
T ss_pred CCEEEec--ccccCCCCcceeeeecH-HHHhH-hc--cCC--cC------------------------------------
Confidence 5888874 888766 4577777643 22211 10 000 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CC-eEEeCCCCceeEEEEEcCC--
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DR-FELVCPPSMGLVCFRLKGD-- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g-~~~~~~~~~~~v~f~~~~~-- 293 (367)
.+-.+.........++|+.+..++ +.++..++.+++++.|+++ +. +.-+. +...++.+.+...
T Consensus 322 ------~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vr-g~G~~~~i~l~~~~~ 391 (474)
T PLN02624 322 ------STFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVR-GRGLLNAVVLNSPKL 391 (474)
T ss_pred ------CCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEE-eeEEEEEEEecCCCc
Confidence 000111122334444455443333 3345556666666666553 21 21111 1122333334321
Q ss_pred -chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 294 -NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 294 -~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
.....++.+.|.++|+ ++.+. +..++|+++ +..++++||+.+++.|++++++...+.
T Consensus 392 ~~~~a~~~~~~L~e~GV-~v~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~~~~~~ 449 (474)
T PLN02624 392 GPVSAYDVCLKLKERGL-LAKPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEHDLPKL 449 (474)
T ss_pred ChHHHHHHHHHHHhCCe-EEecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1335678888988884 44432 456899965 567889999999999999888765444
No 262
>PLN02397 aspartate transaminase
Probab=99.49 E-value=4.8e-12 Score=123.57 Aligned_cols=255 Identities=16% Similarity=0.098 Sum_probs=156.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec-C-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++++.++......++..|++++.++. + +++.+|++.+++.+.+.+. ..++++++.++||||.+ +.+++
T Consensus 142 Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~---~~~~i~~~~P~NPTG~v~s~e~l~~ 218 (423)
T PLN02397 142 GSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPD---GSFVLLHACAHNPTGVDPTPEQWEQ 218 (423)
T ss_pred CCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 346777888999999999999999999987 3 3578999999988864311 13678888899999998 56778
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhh--hhCCCCCcceeeeccccccc-cCCcceeEEE--ecchhhhhhccCC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWV--KNANHLTNTFFTD 177 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~--~~~~~~~~~~~~~ 177 (367)
|+++|++||+++++|++|....+... .... .......--+++.+..|.++ .+..+|++++ ...+.+......-
T Consensus 219 i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~ 298 (423)
T PLN02397 219 ISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQL 298 (423)
T ss_pred HHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHH
Confidence 89999999999999999987654210 0111 11111111255667899998 5688999863 2332222110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH--------H
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL--------K 249 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~ 249 (367)
....... ..+.. .....++...+.. +
T Consensus 299 ~~~~~~~-------------------------------------------~~~~~---~~~q~~~~~~L~~~~~~~~~~~ 332 (423)
T PLN02397 299 KLIARPM-------------------------------------------YSNPP---IHGASIVATILGDPELFSEWTK 332 (423)
T ss_pred HHHHhcc-------------------------------------------cCCCc---HHHHHHHHHHhCCHHHHHHHHH
Confidence 0000000 00000 0111222221111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC----eEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEE
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDR----FELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRF 325 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g----~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi 325 (367)
.+++..++..+..+.+.+.|+++ | +++..|.....++.++ +.+++++|.++..+++. +.+ |+
T Consensus 333 ~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l------~~~~~~~Ll~~~~V~v~-----~~~--Ri 398 (423)
T PLN02397 333 ELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGL------NKEQVDRMTKEYHIYMT-----RDG--RI 398 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCC------CHHHHHHHHHhCCEEEC-----CCC--eE
Confidence 25566777888889999999887 4 5544333222223222 24577888776556553 222 98
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 326 VVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 326 ~~~~~~~~~edid~li~~l~~~~~ 349 (367)
+++. .+++++++++++|+++++
T Consensus 399 ~~~~--~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 399 SMAG--LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEee--CCHHHHHHHHHHHHHHHh
Confidence 7643 478999999999999875
No 263
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=1.7e-12 Score=124.31 Aligned_cols=226 Identities=17% Similarity=0.189 Sum_probs=145.4
Q ss_pred HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 44 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 44 ~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
...+...|++++++++++...++ +++ .+ .+|.+.+++|+++.+.|+++|+++||++| ++||+++
T Consensus 121 ~~~~~~~Gi~v~fvd~~~~~~~~-------l~~~~t------klv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~ 185 (384)
T PRK06434 121 NKVLKTLGIHVDYIDTDRLNSLD-------FDPSNY------DLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATF 185 (384)
T ss_pred HHHHHhcCcEEEEECCCChhhee-------ecCCCe------eEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCC
Confidence 35566789999999886322222 222 23 48888999999999999999999999998 5679998
Q ss_pred ccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhh
Q psy3048 123 AGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNW 200 (367)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 200 (367)
+.... ..+.. ..+|++++|+||++.++.+ .|+++.++++..++... +....
T Consensus 186 ~s~~~-~~pl~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~----~~~~~---------------- 238 (384)
T PRK06434 186 ASPYN-QNPLD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE----RRKTL---------------- 238 (384)
T ss_pred CCccc-CCchh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH----HHHhc----------------
Confidence 65533 21211 1469999999999998765 55565655443332210 00000
Q ss_pred hcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-EeC
Q psy3048 201 LGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFE-LVC 279 (367)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~-~~~ 279 (367)
+.... ++.+++...+.+-++.+++++.++++.+.+.|+.+|.++ +..
T Consensus 239 ------------------------------G~~~~--~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~y 286 (384)
T PRK06434 239 ------------------------------GSNPD--PIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYY 286 (384)
T ss_pred ------------------------------CCCCC--HHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEEC
Confidence 00011 223334445677889999999999999999999999874 555
Q ss_pred CC----------CceeEEEEEcCCchHHHHHHHHHhcc--C-------cEEEEEe--EE----------C--CeeEEEEE
Q psy3048 280 PP----------SMGLVCFRLKGDNDLTNQLYERLMSH--K-------QIYIIKA--SF----------Q--GRPFLRFV 326 (367)
Q Consensus 280 ~~----------~~~~v~f~~~~~~~~~~~l~~~L~~~--g-------~~~~~~~--~~----------~--~~~~lRi~ 326 (367)
|. ..++++|.+.+ .+...++.++|.-- + .....|. .+ . ..+.+|+|
T Consensus 287 Pgl~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRls 365 (384)
T PRK06434 287 PDTEIGKKVLRGFGGMLSFELRS-MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFS 365 (384)
T ss_pred CChHHHHHhcCCCCceEEEEECC-HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEE
Confidence 42 35688999864 33445666665421 1 0111111 00 0 14689997
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~ 349 (367)
+. -||++.+++.|++.++
T Consensus 366 vG-----lEd~~dLi~dl~~Al~ 383 (384)
T PRK06434 366 IG-----IEDIDDLIKDIENALS 383 (384)
T ss_pred eC-----cCCHHHHHHHHHHHhc
Confidence 74 3688999999988764
No 264
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=1.3e-12 Score=120.54 Aligned_cols=256 Identities=13% Similarity=0.063 Sum_probs=167.1
Q ss_pred cCCcchhHHHHHHhCCc--ceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc
Q psy3048 36 SDQSNSSVEKSAIIGDV--PVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY 112 (367)
Q Consensus 36 s~~~H~s~~~~~~~~g~--~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~ 112 (367)
+.-+|.+.-....+.|. +++..+++ +++.+|.|++++...+.. |++|+.- .+..-...|++++.+||++.
T Consensus 121 ~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k-----PK~ii~G--~SaY~r~id~~~~reIad~V 193 (413)
T COG0112 121 SHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK-----PKLIIAG--GSAYSRPIDFKRFREIADEV 193 (413)
T ss_pred CCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC-----CCEEEEC--ccccccccCHHHHHHHHHHh
Confidence 34455554433334444 45556666 569999999999988765 6666544 44455667899999999999
Q ss_pred CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCC
Q psy3048 113 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQS 192 (367)
Q Consensus 113 gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 192 (367)
|+++.+|.||=.+.+....+.. .+..||+++.+.||.|.+|.| |++++++.+..++.- ..++++.+
T Consensus 194 GA~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin----~aVFPg~q------ 259 (413)
T COG0112 194 GAYLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPRG-GIILTNDEELAKKIN----SAVFPGLQ------ 259 (413)
T ss_pred CceEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCCc-eEEEeccHHHHHHhh----hhcCCccC------
Confidence 9999999999877776555443 456789999999999998854 677776655444321 11222211
Q ss_pred CCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccccc-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3048 193 PDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK 271 (367)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~ 271 (367)
+++... ..+...++.....-++++..++..++++.|.+.|.+
T Consensus 260 -------------------------------------ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~ 302 (413)
T COG0112 260 -------------------------------------GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE 302 (413)
T ss_pred -------------------------------------CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 123344566666778889999999999999999998
Q ss_pred CCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeE---ECCeeEEEEEe---cCCCCCHHHHHHH
Q psy3048 272 DDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KAS---FQGRPFLRFVV---TSPETNQCDVAFA 340 (367)
Q Consensus 272 ~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~---~~~~~~lRi~~---~~~~~~~edid~l 340 (367)
. |++++.. .+.+++...+...+...++..+.|.+.++ .+- |.+ ...+..+|+.. +.....++|++.+
T Consensus 303 ~-G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~I-t~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~I 380 (413)
T COG0112 303 R-GFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGI-TVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEI 380 (413)
T ss_pred c-CCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCE-eeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHH
Confidence 5 9998863 35667776665322223444455555553 332 111 22345689843 3344567899998
Q ss_pred HHHHHHHHHHh
Q psy3048 341 WNEISHQSSEM 351 (367)
Q Consensus 341 i~~l~~~~~~~ 351 (367)
.+.|.++++..
T Consensus 381 a~~I~~vl~~~ 391 (413)
T COG0112 381 ADLIADVLDGL 391 (413)
T ss_pred HHHHHHHHhcc
Confidence 88888877653
No 265
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=1.1e-11 Score=120.94 Aligned_cols=225 Identities=13% Similarity=0.097 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEec-CCCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++|++.+++.. .....|++.- .....|..- .+++|.++|++||+++++|++|.++......+.....++ .
T Consensus 186 ~~~l~~~l~~~~---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~ 261 (423)
T PRK05964 186 LDALEALLEKHA---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGV-S 261 (423)
T ss_pred HHHHHHHHHhCC---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCC-C
Confidence 788888886432 1233444443 244456553 499999999999999999999965432221111112233 3
Q ss_pred cceeeeccccccccC-CcceeEEEecchhhhhhccCC---ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 142 VDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTD---RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
.|+++++ |+++++ ..+|+++.++ +... .+... ..++...
T Consensus 262 pDi~~~~--K~l~gG~~p~~av~~~~-~i~~-~~~~~~~~~~~~~~~--------------------------------- 304 (423)
T PRK05964 262 PDIMCLS--KGLTGGYLPLAATLCTA-EIFE-AFYSDDRAKAFMHSP--------------------------------- 304 (423)
T ss_pred CCeeeee--hhhhcCcccceEEEEcH-HHHH-hhhcCCcccccccCC---------------------------------
Confidence 5877664 999876 4677766643 3222 11100 0000000
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-C-CceeEEEEEcCCc-
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-P-SMGLVCFRLKGDN- 294 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~-~~~~v~f~~~~~~- 294 (367)
+. .+......+..++++.+..+ ++.++..++.+++.+.|+++.++..+.+ . ...++.+.+....
T Consensus 305 ---------T~-~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~ 371 (423)
T PRK05964 305 ---------SY-TANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL 371 (423)
T ss_pred ---------CC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc
Confidence 00 01112223344445544332 3556788888888888876533322221 1 2344456664422
Q ss_pred -hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 295 -DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 295 -~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.....+.+.|.++|.+ +.+. + ..+|+++ +..+|++|||+++++|+++++++
T Consensus 372 ~~~~~~l~~~l~~~Gv~-v~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 372 ERDGPALRAFALERGVL-LRPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred hhHHHHHHHHHHHCCeE-EEec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 2356788889999954 4332 2 4799964 67789999999999999998763
No 266
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=1.2e-11 Score=119.45 Aligned_cols=218 Identities=12% Similarity=0.039 Sum_probs=123.7
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
.|++++++++++.+ .+|++...++++|.. +++++|.++|++||+++++|++|+++......+.....++
T Consensus 163 ~d~~~l~~~l~~~~------~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~- 235 (389)
T PRK01278 163 GDIEALKAAITPNT------AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV- 235 (389)
T ss_pred CCHHHHHHhhCCCe------EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-
Confidence 58999999986543 477777666667743 5899999999999999999999986433221111111123
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
..|.+ +..|.+.+....|+++.++. .. +.+. .... .
T Consensus 236 ~pdi~--t~sK~l~~G~~ig~~~~~~~-~~-~~~~-------~~~~-----~---------------------------- 271 (389)
T PRK01278 236 TPDIM--AVAKGIGGGFPLGACLATEE-AA-KGMT-------PGTH-----G---------------------------- 271 (389)
T ss_pred CCCEE--EEehhccCCcceEEEEEcHH-HH-hccC-------CCCC-----C----------------------------
Confidence 24654 45788875556888777532 22 1110 0000 0
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcCCchH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKGDNDL 296 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~~~~~ 296 (367)
.+. ++..+.+.+..++++.+..+. ..++..++.++++++|++ .+++.....+...++.+.+.. .
T Consensus 272 -----~t~-~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~---~ 339 (389)
T PRK01278 272 -----STY-GGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV---P 339 (389)
T ss_pred -----CCC-CccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec---C
Confidence 000 011122233344455443222 334455555566555544 322211111222233344422 2
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
..++.+.|.++|++ +.+. +..++|+++ ....+++|++++++.|++++++
T Consensus 340 ~~~~~~~l~~~GV~-~~p~---~~~~lR~~p-~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 340 NRDLVQALRDEGLL-TVGA---GDNVVRLLP-PLIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHHHHHHHHHCCeE-Eeec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHh
Confidence 56888899989854 4332 346899965 3456799999999999998764
No 267
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.48 E-value=2.9e-11 Score=117.46 Aligned_cols=269 Identities=13% Similarity=0.126 Sum_probs=152.0
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCC------------cceEEEecCCCCCcCHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDA 69 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~~~~~d~~~ 69 (367)
.|+++||.+...+. +..++.+|..+...|-+...+....| .+++.++.+ |+++
T Consensus 112 ~a~klar~~~~~~~----------~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~ 176 (403)
T PRK05093 112 AAFKLARRYACDRH----------GPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAA 176 (403)
T ss_pred HHHHHHHHHHhhcC----------CCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHH
Confidence 36788888765221 11235566677777877665544321 223444433 7899
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccc-cCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcce
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCA-FDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS 144 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~-i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 144 (367)
+++.+.+.+ .+|++. +.+++|. +.| +++|.++|++||+++++|++|++.............++ ..|+
T Consensus 177 l~~~l~~~~------aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi 248 (403)
T PRK05093 177 VKAVIDDHT------CAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGV-TPDI 248 (403)
T ss_pred HHHHhcCCe------EEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCCE
Confidence 998886443 456666 4555544 433 99999999999999999999986433221111111122 2365
Q ss_pred eeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccc
Q psy3048 145 FAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQ 224 (367)
Q Consensus 145 ~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (367)
. +..|.+++...+|+++.++. +.+.+.. .. . .
T Consensus 249 ~--s~sK~l~~G~rig~vv~~~~--i~~~l~~---~~----~---~---------------------------------- 280 (403)
T PRK05093 249 L--TSAKALGGGFPIGAMLTTAE--IASHFKV---GT----H---G---------------------------------- 280 (403)
T ss_pred E--EecccccCCcceEEEEEcHH--HHhhcCC---CC----C---C----------------------------------
Confidence 4 44699886566888887432 2111110 00 0 0
Q ss_pred cccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeC-CCC-ceeEEEEEcCC-chHHHHH
Q psy3048 225 HWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVC-PPS-MGLVCFRLKGD-NDLTNQL 300 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~-~~~-~~~v~f~~~~~-~~~~~~l 300 (367)
.+. .+....+....++|+.+.. .+..++.+++.+++.+.|+++. .+.++. .+. ...+.+.++.. .....++
T Consensus 281 -~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~ 355 (403)
T PRK05093 281 -STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDF 355 (403)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHH
Confidence 000 0111112233344444322 2445677788888888887752 111221 222 23344455331 1245688
Q ss_pred HHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 301 YERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 301 ~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
++.|.++|. ++.+ .+..++|++++ ...+++|++.+++.|+++++++
T Consensus 356 ~~~l~~~Gv-~v~~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 356 LNAAAEEGV-MVLV---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHCCe-EEec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 899999984 4433 24468999653 4457999999999999988654
No 268
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.48 E-value=1.9e-13 Score=115.48 Aligned_cols=127 Identities=26% Similarity=0.157 Sum_probs=97.0
Q ss_pred ceEEEecCCcchhHH-HHHHhCCcceEEEecCCCCCcCHH--HHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVE-KSAIIGDVPVRQLRSDDNGVLRGD--ALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~-~~~~~~g~~v~~v~~~~~~~~d~~--~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+..|++++..|.+.. ..+...|++++.++.++++..+.+ .+++... ...|.+++++++++++|...|+++|.
T Consensus 41 ~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~ 115 (170)
T cd01494 41 GDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIR 115 (170)
T ss_pred CCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHH
Confidence 445777888999988 778889999999998654433332 4433221 23367899999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEe
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVK 165 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~ 165 (367)
++|+++|+++++|++|+++......... ....+|+++.++|||+++ +|+|+++++
T Consensus 116 ~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 116 KIAKEYGILLLVDAASAGGASPAPGVLI---PEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred HHHHHcCCEEEEeccccccccccccccc---ccccCCEEEEEcccccCC-CceEEEEeC
Confidence 9999999999999999887665422111 123469999999999998 799999874
No 269
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.47 E-value=1.9e-11 Score=116.89 Aligned_cols=247 Identities=12% Similarity=0.071 Sum_probs=152.7
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCC-----cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGV-----LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~-----~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.|++.+.++..+...++..|++++.++.+.++. .+++++++... . +.+++++.++|+||.+-+.++|.
T Consensus 99 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~l~nP~NPTG~~~~~~~l~ 171 (360)
T PRK07392 99 AVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLT-P------NDGLLLNNPHNPTGKLWSREAIL 171 (360)
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhcc-C------CCEEEEeCCCCCCCCCcCHHHHH
Confidence 567788899999999999999999999864432 45555554321 1 35888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++++++++ +++|++|..+..... .....+...++ -+++.+..|.++ ....+|+++... +.+........
T Consensus 172 ~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~~v~~~-~~~~~~~~~~~----- 243 (360)
T PRK07392 172 PLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPN-LIILRSLTKFYSLPGLRLGYAIAHP-DRLQRWQQWRD----- 243 (360)
T ss_pred HHHHHCCE-EEEECchhhhccCccccchHHHhhcCCC-EEEEEechhhhcCCchheeeeeCCH-HHHHHHHhhCC-----
Confidence 99999985 677999976543211 00001111111 356678899998 558899988743 33322110000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la 262 (367)
.+ . ...+...++...+.... .+...+...+..
T Consensus 244 ----------~~-------------------------------~------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r 276 (360)
T PRK07392 244 ----------PW-------------------------------P------VNGLAAAAAIAALADRDFQQQTWAWLPPAR 276 (360)
T ss_pred ----------CC-------------------------------C------CCHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 00 0 01122222222222222 333344566777
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-EC--CeeEEEEEecCCCCCHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-FQ--GRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~edid 338 (367)
+++.+.|++++|+.+. ++..+.+.++++. ...++.+++. +.|+ .+.++. +. +.+++|+++.. .++.+
T Consensus 277 ~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~---~~~~l~~~ll~~~gv-~v~pg~~f~~~~~~~iRi~~~~----~~~~~ 347 (360)
T PRK07392 277 EALFQGLASLPGLTPL-PSAANFLLVQSQG---SALQLQEKLLQQHRI-LIRDCLSFPELGDRYFRVAVRT----EAENQ 347 (360)
T ss_pred HHHHHHHHhCCCcEEC-CCCCCEEEEEcCC---CHHHHHHHHHhhCCE-EEEeCCCCCCCCCCEEEEEeCC----HHHHH
Confidence 8888999888888764 3445555555532 3567887765 4564 444443 22 34699997753 56678
Q ss_pred HHHHHHHHHHH
Q psy3048 339 FAWNEISHQSS 349 (367)
Q Consensus 339 ~li~~l~~~~~ 349 (367)
++.++|+++..
T Consensus 348 ~l~~al~~~~~ 358 (360)
T PRK07392 348 RLLEALAAILA 358 (360)
T ss_pred HHHHHHHHHhh
Confidence 88888887654
No 270
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.46 E-value=1.4e-11 Score=118.11 Aligned_cols=267 Identities=12% Similarity=0.134 Sum_probs=161.9
Q ss_pred cCCcchhHHHH-HHhCCcceEEEecC----------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc---C
Q psy3048 36 SDQSNSSVEKS-AIIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF---D 100 (367)
Q Consensus 36 s~~~H~s~~~~-~~~~g~~v~~v~~~----------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i---~ 100 (367)
+...|++...+ +...|+.++.++.+ .+|.+|+++|++++++.... ..+ +|+++...|.. |.. +
T Consensus 114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~-~~~-lV~~e~t~N~~GG~pvs~~ 191 (450)
T TIGR02618 114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGAD-KIP-YICLAVTVNLAGGQPVSMA 191 (450)
T ss_pred CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCc-ccC-ceEEEEecccCCCeeCCHH
Confidence 55788777776 67788866656432 35899999999999864321 122 44444445544 777 6
Q ss_pred ChhhHHHHHhhcCcEEEEeccccccc-ccC--------h-hhhhhhCC-CCCcceeeeccccccccCCcceeEEEecchh
Q psy3048 101 NLEELGPICQEYNIWLHVDAAYAGSA-LLL--------P-EYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNANH 169 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~a~~~~~-~~~--------~-~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~ 169 (367)
++++|.++|++||+++|.|+|+..+. ++. + ........ .+.+|.+++|+||-+.+|. .|++.+++++.
T Consensus 192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l 270 (450)
T TIGR02618 192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEM 270 (450)
T ss_pred HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHH
Confidence 78999999999999999999997732 221 0 11000011 3468999999999999986 45666688776
Q ss_pred hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH
Q psy3048 170 LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK 249 (367)
Q Consensus 170 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (367)
+++.......| .+.. .| |+ +. ++ ...++..+|...-.
T Consensus 271 ~~k~r~~~~~~--eG~~-------ty-----------------------Gg-------la-~r--~~~ala~gL~e~~~- 307 (450)
T TIGR02618 271 FQSAKELVVVF--EGMP-------SY-----------------------GG-------LA-GR--DMEAMAIGIREAVD- 307 (450)
T ss_pred HHHHHHHhhhc--CCcc-------cc-----------------------Cc-------hh-hh--hHHHHHHHHHHhhh-
Confidence 66543221122 1100 01 00 00 00 11222223332211
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC------chH-HHHHHHHHhcc-CcEEEEEeEE----
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD------NDL-TNQLYERLMSH-KQIYIIKASF---- 317 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~------~~~-~~~l~~~L~~~-g~~~~~~~~~---- 317 (367)
+...++....++||.+.|.+. |+.+..|+..+.|.+..... .+. ...+.-.|..+ |+--+.-+.+
T Consensus 308 --~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~ 384 (450)
T TIGR02618 308 --YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGR 384 (450)
T ss_pred --HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceeccc
Confidence 244556667899999999998 99987778888888764321 121 23555555443 3222221111
Q ss_pred ---------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 318 ---------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 318 ---------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..-..+|+++...--|.+.+|.+.++|..+.++-
T Consensus 385 ~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 385 NNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 0135899987555556899999999999987753
No 271
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=1.6e-11 Score=116.39 Aligned_cols=238 Identities=10% Similarity=0.046 Sum_probs=149.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++...|..+...++..|++++.++.++++.+|++++++++ +.+ .++++++++|+||.+-+.++|.++++
T Consensus 95 d~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~------~~v~~~~P~NPtG~~~~~~~l~~i~~ 167 (337)
T PRK03967 95 KHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNA------SAVFICSPNNPTGNLQPEEEILKVLE 167 (337)
T ss_pred CeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCC------CEEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 35666778888787788889999999999877899999998764 223 36667899999999999999999995
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
+|+++++|++|..+.. ...........+ -++..+..|.++ ....+|+++.. ++.+.........
T Consensus 168 -~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~---------- 232 (337)
T PRK03967 168 -TGKPVVLDEAYAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPP---------- 232 (337)
T ss_pred -cCCEEEEECchhhhcc--cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCC----------
Confidence 7999999999975421 111111111111 356678999998 44778998874 3333222111000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHH
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~~l~~~ 268 (367)
|.. ..+...++...+ ..+.+.+..++..+..+.+.+.
T Consensus 233 ------------------------------------~~~------~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 270 (337)
T PRK03967 233 ------------------------------------FSL------NILTMKIVRLALDHYDLIEERIDYIIKERERVRRE 270 (337)
T ss_pred ------------------------------------CCC------CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 011222222111 1223444445556666777777
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
|.+. ..++..+.+++++ .+.+.|.++|+ .+.+......+++|+++. +.++.++++++|+++.
T Consensus 271 L~~~-----~~~~~~~~~~~~~--------~~~~~l~~~gi-~v~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 271 LGEY-----AYPSDANFLLLKL--------DAYDYLLENGI-VVRKLSGRLEGHIRVTVG----KREENDEFIKALKEIK 332 (337)
T ss_pred hccC-----cCCCCCcEEEEhH--------HHHHHHHHCCE-EEEeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHH
Confidence 7654 1234444444432 26677777884 443322233569999764 4788999999998886
Q ss_pred HH
Q psy3048 349 SE 350 (367)
Q Consensus 349 ~~ 350 (367)
+.
T Consensus 333 ~~ 334 (337)
T PRK03967 333 EG 334 (337)
T ss_pred Hh
Confidence 54
No 272
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.45 E-value=1.7e-11 Score=117.99 Aligned_cols=213 Identities=13% Similarity=0.104 Sum_probs=127.3
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+.+.+ .+|+++.+++++|.. +++++|.++|++||+++++|++|++.............++ .
T Consensus 159 d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~ 231 (379)
T TIGR00707 159 DIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-E 231 (379)
T ss_pred CHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCC-C
Confidence 8999999987644 466677766666754 2489999999999999999999975322111111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++ ..|.+.++..+|+++.. ++.... +. .... ...
T Consensus 232 ~d~~t--~sK~~~~G~riG~~~~~-~~~~~~-~~-------~~~~-----~~~--------------------------- 268 (379)
T TIGR00707 232 PDIIT--LAKGLGGGVPIGATLAK-EEVAEA-FT-------PGDH-----GST--------------------------- 268 (379)
T ss_pred CCEEE--EcccccCCcccEEEEEc-HHHHhh-hc-------CCCC-----CCC---------------------------
Confidence 36554 57999966778888774 332221 10 0000 000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe-C--CCCceeEEEEEcCCchHHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELV-C--PPSMGLVCFRLKGDNDLTN 298 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~-~--~~~~~~v~f~~~~~~~~~~ 298 (367)
+. ...+...+..++|+.+.. .++.++.+++.++++++|+++ +.... . ++....+.+.++. . ..
T Consensus 269 ----~~---~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~-~--~~ 334 (379)
T TIGR00707 269 ----FG---GNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEA-P--CK 334 (379)
T ss_pred ----CC---CCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecC-c--HH
Confidence 00 111223344445554432 245566777888888877664 22211 1 1233456666643 2 56
Q ss_pred HHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 299 QLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 299 ~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
++.+.|.++|+. +.+ .+..++|+++ +...++++++++++.|+++
T Consensus 335 ~~~~~l~~~Gv~-v~~---~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 335 DIVKKALEKGLL-VNC---AGPKVLRFLP-PLIITKEEIDEAVSALEEA 378 (379)
T ss_pred HHHHHHHHCCcE-Eee---CCCCEEEEEC-CCcCCHHHHHHHHHHHHHh
Confidence 888899999854 433 2346899965 4556799999999999875
No 273
>PRK08637 hypothetical protein; Provisional
Probab=99.45 E-value=2.4e-11 Score=117.41 Aligned_cols=266 Identities=12% Similarity=0.037 Sum_probs=148.9
Q ss_pred ceEEEecCCcchhHHHHH-HhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSA-IIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~-~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++.+.++..+...+ ...|++++.++.. +++.+|+++|+++++...+. ...+++++.++||||.+ +.+++
T Consensus 93 gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s~~~~~~ 170 (388)
T PRK08637 93 GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGYTPTEKEATA 170 (388)
T ss_pred CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCCHHHHHH
Confidence 345677777887777764 4589999999983 55678999999998721111 12467788899999988 45677
Q ss_pred HHHHHhh-----cCcEEEEecccccccccChhhhh---hhCCC-CCcceee-eccccc-cccCCcceeEEEec-----ch
Q psy3048 105 LGPICQE-----YNIWLHVDAAYAGSALLLPEYAH---LKRGL-EYVDSFA-FNAHKW-LLTNHDCSAMWVKN-----AN 168 (367)
Q Consensus 105 I~~l~~~-----~gi~l~vD~a~~~~~~~~~~~~~---~~~~~-~~~D~~~-~~~hK~-l~~p~g~g~l~~~~-----~~ 168 (367)
|+++|++ ||+++++|++|....+....... .+.+. +++.++. .+..|. +.....+|++++.. +.
T Consensus 171 l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~ 250 (388)
T PRK08637 171 IVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQT 250 (388)
T ss_pred HHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHH
Confidence 7777775 99999999999765442211111 11111 1222332 367775 55557899988743 22
Q ss_pred hhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH
Q psy3048 169 HLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL 248 (367)
Q Consensus 169 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 248 (367)
...........++..... .. ..+...++...+..
T Consensus 251 l~~~~~~~~~~~~~~~~~-------------------------------------------~~---s~~~q~a~~~~l~~ 284 (388)
T PRK08637 251 VKEALEKKVKGLIRSNIS-------------------------------------------NG---PHPSQSAVLRALNS 284 (388)
T ss_pred HHHHHHHHHHHHhhcccC-------------------------------------------CC---CcHHHHHHHHHhCC
Confidence 221110000000000000 00 01222222222222
Q ss_pred HHH----HHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEECCe
Q psy3048 249 KGL----QAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASFQGR 320 (367)
Q Consensus 249 ~g~----~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~ 320 (367)
..+ .+......+..+.+.+.|++. +++.+..+.....++++++ .....++.+.|.+ +|+ .+.+ .+.
T Consensus 285 ~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~--~~~~~~l~~~l~~~~gv-~~~~---~~~ 358 (388)
T PRK08637 285 PEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK--GVDAEELRVHLLEKYGI-GTIA---LNE 358 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC--hHHHHHHHHHHhhhcce-EEEe---ccC
Confidence 222 222233444445556666554 2455544333333444554 2235688888864 564 3322 245
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.++|++++. .+.++++..++.|.++++.+
T Consensus 359 ~~iRi~~~~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 359 TDLRIAFSC--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred CceEEEeec--CCHHHHHHHHHHHHHHHHhc
Confidence 689997743 46899999999999887654
No 274
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.45 E-value=7.9e-12 Score=121.91 Aligned_cols=126 Identities=13% Similarity=0.012 Sum_probs=89.5
Q ss_pred CceEEEecCCcch------hHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCc--cc--c
Q psy3048 29 SRLVAYASDQSNS------SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTG--TC--A 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~------s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~--~G--~ 98 (367)
+.-.|++++..|. ++...++..|+++++++.+ ...++++++++++++|+ +|++++.+|+ .| .
T Consensus 159 ~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~ 230 (454)
T TIGR00474 159 KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTE 230 (454)
T ss_pred CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCE------EEEEEccCcccccCCCC
Confidence 3446677776663 3444566789999999764 34589999999988774 7777777776 36 4
Q ss_pred cCChhhHHHHHhhcCcEEEEecccccc------cccChh--hhhhhCCCCCcceeeeccccccccCCcceeEEEec
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYAGS------ALLLPE--YAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~~~------~~~~~~--~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
+.|+++|+++||+||+++++|++.|.. .+.... ...... .+|++++|+|||+++| ++|+++.++
T Consensus 231 ~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~---GaDiv~fSg~K~LgGp-~~G~i~g~~ 302 (454)
T TIGR00474 231 EVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAA---GVDLVTFSGDKLLGGP-QAGIIVGKK 302 (454)
T ss_pred CCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHc---CCCEEEecCccccCCC-eEEEEEECH
Confidence 789999999999999999999864432 001100 011112 3699999999999988 578888764
No 275
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.45 E-value=7.1e-12 Score=121.95 Aligned_cols=259 Identities=12% Similarity=0.050 Sum_probs=150.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcc-----------eEEEecCCC--CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVP-----------VRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~-----------v~~v~~~~~--~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
-.|++.+.++......++..|.+ ++.++++.+ +..|.++ +. +.+|+++.++||||
T Consensus 123 d~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~------~k~i~l~nP~NPTG 190 (409)
T PRK07590 123 NTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EK------VDIIYLCFPNNPTG 190 (409)
T ss_pred CEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cC------ceEEEEeCCCCCcC
Confidence 45666788999888889988986 888888633 3333221 22 35777789999999
Q ss_pred cc---CChhhHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhh
Q psy3048 98 AF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLT 171 (367)
Q Consensus 98 ~i---~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~ 171 (367)
.+ +.+++|+++|++||+++++|++|+-..+....... .+.+....-++..+..|.++ ....+|+++... ..+.
T Consensus 191 ~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~-~li~ 269 (409)
T PRK07590 191 TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK-ELKG 269 (409)
T ss_pred CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCH-HHhh
Confidence 98 45677888899999999999999764332111000 01111111355678999996 557788888743 2222
Q ss_pred hhccCC-----ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh
Q psy3048 172 NTFFTD-----RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY 246 (367)
Q Consensus 172 ~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 246 (367)
...... ..+..... ..+ .....+....+..++...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~--------------------------------------~~~--~~~s~~~q~a~~~~l~~~ 309 (409)
T PRK07590 270 KTSDGEGVSLNSLWNRRQS--------------------------------------TKF--NGVSYIVQRAAEAVYSPE 309 (409)
T ss_pred hccccchhhhHHHHHHHHh--------------------------------------hcc--cCcCHHHHHHHHHHhcCC
Confidence 100000 00000000 000 000001111121222211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E--CCeeEE
Q psy3048 247 GLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F--QGRPFL 323 (367)
Q Consensus 247 ~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~--~~~~~l 323 (367)
+...+++..++..+..+++.+.|+++ |+++..+.....++++++. .....++.+.+.++..+.+.++. + .+..++
T Consensus 310 ~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i 387 (409)
T PRK07590 310 GKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYF 387 (409)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCC-CCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEE
Confidence 23455666777778888888999887 6776544455667777754 22346777777755334444432 2 234699
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~ 347 (367)
|+++. .++++++..++.|.++
T Consensus 388 Ri~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 388 RLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred EEEcc---CCHHHHHHHHHHHHhh
Confidence 99642 3688999999888764
No 276
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.43 E-value=1.7e-11 Score=119.01 Aligned_cols=256 Identities=12% Similarity=-0.009 Sum_probs=148.2
Q ss_pred eEEEecCCcchhHHHHHHhCCc-----------ceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDV-----------PVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~-----------~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
-.|++.+.++..+...++..|+ +++.++.++ ++..+.+. . +. +.+|++++++|+||
T Consensus 119 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~--~~------~~~i~l~nP~NPTG 187 (402)
T TIGR03542 119 NTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---E--PK------IDIIYLCSPNNPTG 187 (402)
T ss_pred CEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---c--CC------ceEEEEeCCCCCCC
Confidence 3466778888888888888999 888888753 34444221 1 12 34777789999999
Q ss_pred ccCC---hhhHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhh
Q psy3048 98 AFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLT 171 (367)
Q Consensus 98 ~i~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~ 171 (367)
.+-+ +++|+++|++||+++++|++|+-+......... ........-+++.+..|.++ ....+|+++.... .+.
T Consensus 188 ~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~ 266 (402)
T TIGR03542 188 TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTY 266 (402)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-Hhh
Confidence 9965 888999999999999999999754331110000 01111111355678899996 4477888887432 220
Q ss_pred hhc-cCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---
Q psy3048 172 NTF-FTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG--- 247 (367)
Q Consensus 172 ~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 247 (367)
... .....+...... .... ...+...++...+.
T Consensus 267 ~~~~~~~~~~~~~~~~----------------------------------------~~~~---~s~~~q~~~~~~l~~~~ 303 (402)
T TIGR03542 267 ADGHSVIQDWERRQCT----------------------------------------KFNG---ASYPVQRAAEAAYAGEG 303 (402)
T ss_pred cchhhHHHHHHHHhhh----------------------------------------cccC---CCHHHHHHHHHHHcCcc
Confidence 000 000000000000 0000 00112122222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E--CCeeEE
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F--QGRPFL 323 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~--~~~~~l 323 (367)
...+.+..+...+..+++.+.|++. |+++..+...+.++++++. .....++.+.|.+ .|+ .+.++. + .+..++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv-~v~pg~~f~~~~~~~i 380 (402)
T TIGR03542 304 LQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPE-GISSWDFFDFLLYQYHV-VGTPGSGFGPSGEGFV 380 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCC-CCCHHHHHHHHHHhCCE-EEeCchhhCCCCCCEE
Confidence 1224444555667778888888876 6776544455677777754 2235678888775 464 444432 2 235799
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~ 347 (367)
|+++.. ++++++..++.|+++
T Consensus 381 Ris~~~---~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 381 RFSAFG---KRENIVEACERIKEA 401 (402)
T ss_pred EEEecC---CHHHHHHHHHHHHhh
Confidence 997532 688899988888764
No 277
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.43 E-value=2.7e-11 Score=116.44 Aligned_cols=267 Identities=11% Similarity=0.100 Sum_probs=158.7
Q ss_pred cCCcchhHHHH-HHhCCcceEEEec----------CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc---C
Q psy3048 36 SDQSNSSVEKS-AIIGDVPVRQLRS----------DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF---D 100 (367)
Q Consensus 36 s~~~H~s~~~~-~~~~g~~v~~v~~----------~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i---~ 100 (367)
+...|+....+ +...|+..+-+.. ..+|.+|+++|++++.+.... ...+++++...|.. |+. +
T Consensus 121 p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~--~~~lV~a~itvn~~GGqpvs~~ 198 (460)
T PRK13237 121 PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAE--NIAYICLAVTVNLAGGQPVSMA 198 (460)
T ss_pred CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCC--ccCceEEEEecccCCCeeCCHH
Confidence 66677777666 6677875444421 246999999999999864321 11234444445666 554 4
Q ss_pred ChhhHHHHHhhcCcEEEEecccccccc-cC----hhhhhh-----hCC-CCCcceeeeccccccccCCcceeEEEecchh
Q psy3048 101 NLEELGPICQEYNIWLHVDAAYAGSAL-LL----PEYAHL-----KRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNANH 169 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~a~~~~~~-~~----~~~~~~-----~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~ 169 (367)
++++|.++|++||+++|.|+|+..+.. +. +.+... ... .+.+|.+++|+||.+.+|. .|++.+++++.
T Consensus 199 ~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL 277 (460)
T PRK13237 199 NMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEEL 277 (460)
T ss_pred hHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHH
Confidence 789999999999999999999976522 11 011110 001 2468999999999999875 57788888776
Q ss_pred hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH
Q psy3048 170 LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK 249 (367)
Q Consensus 170 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (367)
+++.......|- + -+.| | .+ .++.. .++...|...-.
T Consensus 278 ~~~~r~~~~~~e--G-------~~ty-----------------------g-------g~-~grd~--~alAvgl~E~~~- 314 (460)
T PRK13237 278 FDEAKELVVVYE--G-------MPSY-----------------------G-------GM-AGRDM--EAMAIGIEESVQ- 314 (460)
T ss_pred HHHHHHhccccC--C-------CcCC-----------------------C-------Ch-hhhHH--HHHHhHHHhhch-
Confidence 655422111110 0 0011 0 00 01111 122222332211
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcC------Cch-HHHHHHHHHhcc-CcEEEEEeEE----
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKG------DND-LTNQLYERLMSH-KQIYIIKASF---- 317 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~------~~~-~~~~l~~~L~~~-g~~~~~~~~~---- 317 (367)
.+..++....++||.++|.+- |+.+..|...+-+.+.... ..+ -...+.-.|..+ |+--+.-+.+
T Consensus 315 --~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~ 391 (460)
T PRK13237 315 --YEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGR 391 (460)
T ss_pred --HHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceeccc
Confidence 266667788899999999885 8999887655666553211 012 123555555443 3222211111
Q ss_pred ---------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 318 ---------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 318 ---------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..-..+|+++...--|.+.+|.++++|..+.++-
T Consensus 392 ~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 392 DPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred CCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 0135899987555556899999999999987753
No 278
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.43 E-value=5.8e-11 Score=113.45 Aligned_cols=243 Identities=12% Similarity=0.000 Sum_probs=148.6
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.|++.+.++......++..|.+++.++++ +++.++.++++++.. .+ .++++++++|+||.+-+.+++.+++
T Consensus 108 ~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~~------k~i~l~~p~NPTG~~~s~~~~~~l~ 180 (357)
T PRK14809 108 TVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-GE------RIVYLTSPHNPTGSEIPLDEVEALA 180 (357)
T ss_pred EEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-CC------cEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 45666677666666777889999988885 357778888777652 22 4777889999999998877777776
Q ss_pred hhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 110 QEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 110 ~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+.. ++++++|++|+......... ......++ -+++.+..|.++ ....+|+++..+ +.++.......
T Consensus 181 ~~~~~~~~iI~De~y~~~~~~~~~~-~~~~~~~~-vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~~-------- 249 (357)
T PRK14809 181 ERTDEETLVVVDEAYGEFAERPSAV-ALVEERDD-VAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVNT-------- 249 (357)
T ss_pred HhCccCcEEEEechhhhccCCchhH-HHHhhCCC-EEEEecchhHhcCcchhheeeecCH-HHHHHHHHhCC--------
Confidence 643 78999999997643321111 11111111 255667899997 457788888743 33332211000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l 265 (367)
.+ . ...+...+++..+. .+.+++..+...+..+++
T Consensus 250 -------~~-------------------------------~------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l 285 (357)
T PRK14809 250 -------PF-------------------------------A------ASELACRAGLAALDDDEHVERTVETARWAREYI 285 (357)
T ss_pred -------CC-------------------------------C------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 00 0 01122333333332 233555555666666777
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.+.|... . .++..+.+++++.+ ..++.+.|.++|+....+..+....++|+++. +.++++.++++|+
T Consensus 286 ~~~L~~~-~----~~~~g~f~~~~~~~----~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~ 352 (357)
T PRK14809 286 REELDAP-T----WESAGNFVLAEVGD----ASAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLN 352 (357)
T ss_pred HHHhcCc-c----CCCCCCEEEEECCC----HHHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHH
Confidence 7777543 1 24455566666532 46788888878754333333333569999753 4789999999998
Q ss_pred HHHH
Q psy3048 346 HQSS 349 (367)
Q Consensus 346 ~~~~ 349 (367)
++++
T Consensus 353 ~~l~ 356 (357)
T PRK14809 353 EVLA 356 (357)
T ss_pred HHhc
Confidence 8754
No 279
>PRK08354 putative aminotransferase; Provisional
Probab=99.43 E-value=2.4e-11 Score=113.89 Aligned_cols=116 Identities=10% Similarity=-0.107 Sum_probs=86.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~ 106 (367)
.-.|++.+.++..+...++..|++++.++ +|++.|++++++ + .++++++|+|+||.+. .+++|+
T Consensus 77 gd~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~~~~~l~~l~ 143 (311)
T PRK08354 77 DRKVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVER-N------SVVFFCNPNNPDGKFYNFKELKPLL 143 (311)
T ss_pred CCeEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhcC-C------CEEEEecCCCCCCCccCHHHHHHHH
Confidence 34577788999999999999999997653 478899887752 2 3688899999999985 467777
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEE
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWV 164 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~ 164 (367)
++|+++|+++++|++|+.+...... ..- .--+++.+..|.++ ....+|+++.
T Consensus 144 ~~a~~~~~~li~De~y~~f~~~~~~-----~~~-~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 144 DAVEDRNALLILDEAFIDFVKKPES-----PEG-ENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred HHhhhcCcEEEEeCcchhccccccc-----cCC-CcEEEEeccHhhcCCccceeeeeee
Confidence 8889999999999999765442110 001 11456677899997 4467888776
No 280
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.43 E-value=3.1e-11 Score=114.03 Aligned_cols=238 Identities=13% Similarity=-0.001 Sum_probs=146.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~ 107 (367)
-.|++.+.++......++..|++++.|+.+ +++++++ .+ .+++++.|+||||.+-+ +++|++
T Consensus 87 d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~ 151 (330)
T PRK05664 87 GRVGVLSPCYAEHAHAWRRAGHQVRELDEA--------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHA 151 (330)
T ss_pred CEEEEcCCChHHHHHHHHHcCCeEEEechh--------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHH
Confidence 356678889999999999999999998763 4555553 22 36788899999999955 566666
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+|+++|+++++|++|..+. ..+.... +..- .--+++.+..|.++ ....+|+++.. ++.+.........+
T Consensus 152 ~~~~~~~~iI~DE~y~~~~-~~~s~~~-~~~~-~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~~~------ 221 (330)
T PRK05664 152 RLAARGGWLVVDEAFMDNT-PQHSLAA-CAHR-PGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLGPW------ 221 (330)
T ss_pred HHHhcCCEEEEECCcccCC-Ccccccc-cccC-CCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcCCC------
Confidence 7789999999999986432 1111111 1111 11266777899997 55788998873 33333221110000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.. +. .....+..+|.. ....++..++..+..+++.
T Consensus 222 ----------------------------------------~~--~~-~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~ 256 (330)
T PRK05664 222 ----------------------------------------TV--SG-PTRWLAQAALAD--TPWQRRQRERLLAASQRLA 256 (330)
T ss_pred ----------------------------------------CC--CH-HHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHH
Confidence 00 00 011122222321 1234555666777788889
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
+.|+++ |++.. ......+.++.+ ...++.+.|.++|+. +.. +....++|+++.. ++++.++++++|++
T Consensus 257 ~~L~~~-~~~~~-~~~~~f~~~~~~----~~~~~~~~l~~~gi~-v~~--f~~~~~iRis~~~---~~~~~~~l~~al~~ 324 (330)
T PRK05664 257 ALLRRH-GLTPA-GGCALFQWVRTE----DAAALHEFLARRGIL-TRL--FEQPASLRFGLPA---DEADWARLDQALLA 324 (330)
T ss_pred HHHHHC-CCccc-CCcceEEEEecC----CHHHHHHHHHHCCeE-EEE--CCCCCeEEEECCC---CHHHHHHHHHHHHH
Confidence 999886 55421 112233444432 256888888888854 332 2345699997643 57889999999998
Q ss_pred HHHH
Q psy3048 347 QSSE 350 (367)
Q Consensus 347 ~~~~ 350 (367)
+.++
T Consensus 325 ~~~~ 328 (330)
T PRK05664 325 YRKE 328 (330)
T ss_pred HHhh
Confidence 8765
No 281
>KOG0256|consensus
Probab=99.42 E-value=2.4e-11 Score=112.18 Aligned_cols=266 Identities=13% Similarity=0.108 Sum_probs=166.1
Q ss_pred cchhHHHHHHh-CCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHHHHHhhc
Q psy3048 39 SNSSVEKSAII-GDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELGPICQEY 112 (367)
Q Consensus 39 ~H~s~~~~~~~-~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~~l~~~~ 112 (367)
-+..+..-+++ .|++++.|.+. ++.++++++||+++++..+.+.....|+++.|+||.|... .+..+.++|.++
T Consensus 179 yY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 179 YYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK 258 (471)
T ss_pred CCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc
Confidence 33333333333 57888888885 5689999999999999988888888999999999999985 455666677899
Q ss_pred CcEEEEecccccccccChhhhhhhC---C---CCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCC
Q psy3048 113 NIWLHVDAAYAGSALLLPEYAHLKR---G---LEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 113 gi~l~vD~a~~~~~~~~~~~~~~~~---~---~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++.+++|+.+++..+.-..+...+. . ...---++++..|=|+.| -..|++|..++....-+.....-++
T Consensus 259 niHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~---- 334 (471)
T KOG0256|consen 259 NIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGL---- 334 (471)
T ss_pred ceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccC----
Confidence 9999999999886664332222111 0 111235778889988887 5678888876653322110000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
++.. + -..+....+-..+..+-+++-.+|....-+|+
T Consensus 335 ----------------------------vSs~---------t------Q~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~ 371 (471)
T KOG0256|consen 335 ----------------------------VSSQ---------T------QYLLASLLSDEEFTREYLRENNKRLRIRHRYI 371 (471)
T ss_pred ----------------------------CcHH---------H------HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 00011111222344455666667777778889
Q ss_pred HHHhcCCCCeEEeCCCCceeEEE-EEcC----Cc-hHHHHHHHHHhccCcEEEEEeEE---CCeeEEEEEecCCCCCHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCF-RLKG----DN-DLTNQLYERLMSHKQIYIIKASF---QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f-~~~~----~~-~~~~~l~~~L~~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~ed 336 (367)
.+.|+++ |+.++. ...++.++ .+.. .. +-.-+|.+++..+-.+.++|+.. ..++++|+++. ...++.
T Consensus 372 ~~gLk~l-gI~cl~-s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA--n~~~~t 447 (471)
T KOG0256|consen 372 VEGLKAL-GIPCLK-SNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA--NMSEET 447 (471)
T ss_pred HhhHHhc-CCceee-cCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec--cCCHHH
Confidence 9999997 888774 34555544 2211 11 11236777777773355655432 45789999764 345677
Q ss_pred HHHHHHHHHHHHHHhhCCC
Q psy3048 337 VAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 337 id~li~~l~~~~~~~~~~~ 355 (367)
++-.+++|++++.+.....
T Consensus 448 ~~~am~Ri~~~~~~~~~~l 466 (471)
T KOG0256|consen 448 LEVAMRRLKQFLDSQVQPL 466 (471)
T ss_pred HHHHHHHHHHHHHhhhccc
Confidence 7778899999888655443
No 282
>PRK05839 hypothetical protein; Provisional
Probab=99.42 E-value=1.9e-11 Score=117.48 Aligned_cols=246 Identities=12% Similarity=0.033 Sum_probs=144.9
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
+.-.|++...++..+...+...|++++.++.+. ++.+|.++. .+ +.+ .+|++++++||||.+ +.++
T Consensus 108 ~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~-~~~------k~v~i~nP~NPTG~~~s~~~l~ 178 (374)
T PRK05839 108 QNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL-QEV------DLVILNSPNNPTGRTLSLEELI 178 (374)
T ss_pred CCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh-ccc------cEEEEeCCCCCcCcccCHHHHH
Confidence 345677778888888888999999999999863 355555433 22 222 477778999999998 4667
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhC--------CCCCcceeeecccccc-ccCCcceeEEEecchhhhhhc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR--------GLEYVDSFAFNAHKWL-LTNHDCSAMWVKNANHLTNTF 174 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~--------~~~~~D~~~~~~hK~l-~~p~g~g~l~~~~~~~~~~~~ 174 (367)
+|+++|++||+++++|++|+-..... ....... ..++ -+++.+..|.+ .....+|+++.. +.......
T Consensus 179 ~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~ii~~-~~~~~~~~ 255 (374)
T PRK05839 179 EWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKN-VLVINSISKRSSAPGLRSGFIAGD-ASILKKYK 255 (374)
T ss_pred HHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCc-EEEEeccccccCCccceeEEEecC-HHHHHHHH
Confidence 78888999999999999997643211 1110000 0011 25667789975 455788888863 33332211
Q ss_pred cCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHH
Q psy3048 175 FTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAY 254 (367)
Q Consensus 175 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 254 (367)
.. ..+.... ........+...+. ..+.+++.
T Consensus 256 ~~-~~~~~~~----------------------------------------------~~~~~q~~~~~~l~--~~~~~~~~ 286 (374)
T PRK05839 256 AY-RTYLGCA----------------------------------------------SPLPLQKAAAVAWL--DDEHAEFF 286 (374)
T ss_pred HH-HhhcCCC----------------------------------------------CChHHHHHHHHHhc--cchHHHHH
Confidence 00 0000000 00000111111111 23334555
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEE-C----CeeEEEEEec
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASF-Q----GRPFLRFVVT 328 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~-~----~~~~lRi~~~ 328 (367)
.++..+..+++.+.| ++. .|+....+++++++ ..++.++|.+ .|+ .+.++.. . +.+++|+++.
T Consensus 287 ~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~~----~~~~~~~l~~~~gi-~v~pg~~f~~~~~~~~~iRis~~ 355 (374)
T PRK05839 287 RNIYAKNLKLAREIL----GIT--IPPATFYVWLPVDN----DEEFTKKLYQNEGI-KVLPGSFLGRNGIGKGYVRIALV 355 (374)
T ss_pred HHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCCC----hHHHHHHHHHHCCE-EEeCchhhCCCCCCCCeEEEEec
Confidence 555556666665554 222 34455556666643 4578888875 664 4544422 2 2579999874
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q psy3048 329 SPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~~ 349 (367)
. +++++...++.|.++++
T Consensus 356 ~---~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 356 Y---DTPKLEKALEIIKTYLE 373 (374)
T ss_pred C---CHHHHHHHHHHHHHHhh
Confidence 2 58999999999988764
No 283
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.42 E-value=2e-11 Score=118.33 Aligned_cols=132 Identities=19% Similarity=0.080 Sum_probs=95.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec-C-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++.+.++......++..|++++.++. + +++.+|+++|+++++.... ...++++++++||||.+ +.+++
T Consensus 120 Gd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG~~~s~~~~~~ 196 (396)
T PRK09257 120 DAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTGADLTPEQWDE 196 (396)
T ss_pred CCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 345777888888888888999999999997 2 4578999999998864211 12577778999999998 56788
Q ss_pred HHHHHhhcCcEEEEecccccccccCh-hhhhh--hCCCCCcceeeecccccccc-CCcceeEEE
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP-EYAHL--KRGLEYVDSFAFNAHKWLLT-NHDCSAMWV 164 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~-~~~~~--~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~ 164 (367)
|+++|++||++++.|.+|....+..+ ..... +.+...--+++.|..|.++. ...+|++++
T Consensus 197 l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 197 LAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 89999999999999999976543211 11110 11111113667889999985 688999874
No 284
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.42 E-value=1.1e-10 Score=113.45 Aligned_cols=273 Identities=12% Similarity=0.115 Sum_probs=154.2
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDA 69 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~ 69 (367)
.||++||.+...+ ... ....+|..+..-|-....+....+.. +..++. .|+++
T Consensus 111 ~Alk~ar~~~~~~-~~~---------~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~ 175 (406)
T PRK12381 111 AALKLARKYAHDR-YGS---------HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNS 175 (406)
T ss_pred HHHHHHHHHHhhc-CCC---------CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHH
Confidence 4788888775422 100 12345555666666665555544421 222322 37899
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccc-----cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcce
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCA-----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS 144 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~-----i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 144 (367)
|++.+++.+ .+|++. |.+++|. .+.+++|.++|++||+++++|++|.+.......+.....++ ..|+
T Consensus 176 l~~~l~~~~------aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi 247 (406)
T PRK12381 176 ASALIDDQT------CAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDV 247 (406)
T ss_pred HHHhccCCe------eEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCCE
Confidence 998886433 355554 5566654 36789999999999999999999965433221111111233 2466
Q ss_pred eeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccc
Q psy3048 145 FAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQ 224 (367)
Q Consensus 145 ~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (367)
+ +..|.+++...+|+++.++. .. ..+.. .. . ..
T Consensus 248 ~--t~sK~l~gG~~ig~~~~~~~-~~-~~~~~---~~----~-----~~------------------------------- 280 (406)
T PRK12381 248 L--TTAKALGGGFPIGAMLTTEK-CA-SVMTV---GT----H-----GT------------------------------- 280 (406)
T ss_pred E--EehhhhhCCCceEEEEEcHH-HH-hhcCC---CC----C-----CC-------------------------------
Confidence 4 55698876566788777432 22 21110 00 0 00
Q ss_pred cccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC-chHHHHH
Q psy3048 225 HWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD-NDLTNQL 300 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~-~~~~~~l 300 (367)
+. .+..+.+....++++.+.. .++.++..++.+++.+.|+++. .+.++.. +.. .++.+.+... ......+
T Consensus 281 --t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~ 354 (406)
T PRK12381 281 --TY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQI 354 (406)
T ss_pred --CC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHH
Confidence 00 0111222333444444422 2456777888888888887752 2222221 122 2334444321 1235678
Q ss_pred HHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 301 YERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 301 ~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
.+.+.++|.+ +.+ .++..+|+++ ....+++||+++++.|+++++++..+.
T Consensus 355 ~~~l~~~Gv~-v~~---~g~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 355 SQEAAKAGVM-VLI---AGPNVVRFAP-ALNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred HHHHHHCCcE-Eee---CCCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 8889999854 332 2446899965 455689999999999999998875543
No 285
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.41 E-value=1.3e-11 Score=121.96 Aligned_cols=128 Identities=11% Similarity=0.061 Sum_probs=91.3
Q ss_pred eEEEecCCcchhHHHHHHhC--CcceEEEecCC--C-----CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC
Q psy3048 31 LVAYASDQSNSSVEKSAIIG--DVPVRQLRSDD--N-----GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN 101 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~--g~~v~~v~~~~--~-----~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d 101 (367)
-.|++....+......++.. |++++.++++. + +.+|+++|++++++.+ .+++++.|+||||.+-+
T Consensus 185 D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~------kai~l~nP~NPTG~vls 258 (521)
T TIGR03801 185 DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSI------KALFVVNPSNPPSVAMS 258 (521)
T ss_pred CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCC------cEEEEeCCCCCCCCCCC
Confidence 35666677888877777765 67777777742 2 8899999998876655 37778899999999955
Q ss_pred ---hhhHHHHHhhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecc
Q psy3048 102 ---LEELGPICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNA 167 (367)
Q Consensus 102 ---l~~I~~l~~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~ 167 (367)
+++|+++|++| |+++++|++|+.+... +.........--+++.|..|.++ ++..+|+++....
T Consensus 259 ~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 259 DESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 78888899986 9999999999854321 11111111111366778899985 5588999888654
No 286
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.41 E-value=1e-10 Score=115.00 Aligned_cols=265 Identities=12% Similarity=0.009 Sum_probs=171.0
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh---hhH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL---EEL 105 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl---~~I 105 (367)
+.-.|++.+.+|+....+.+..|++++.||.|+ ..+|+++|++.++...- ..+.+.-..+||||..-++ ++|
T Consensus 178 pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~-~G~~~e~le~~~~~~~~----k~~y~~P~~qNPtG~tms~~rR~~L 252 (459)
T COG1167 178 PGDTVLVEDPTYPGALQALEALGARVIPVPVDE-DGIDPEALEEALAQWKP----KAVYVTPTFQNPTGVTMSLERRKAL 252 (459)
T ss_pred CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC-CCCCHHHHHHHHhhcCC----cEEEECCCCCCCCCCccCHHHHHHH
Confidence 445777789999999999999999999999974 55799999999987521 2456666678999998655 689
Q ss_pred HHHHhhcCcEEEEecccccccccChhh---hhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEY---AHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~---~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
.++|++||++++.|..++-..+..... ..... ..--++..+..|.+...-++|+++.... .++... .......
T Consensus 253 l~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~--~~rViy~gSFSK~l~PglRlG~vv~p~~-~~~~~~-~~k~~~~ 328 (459)
T COG1167 253 LALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA--PGRVIYLGSFSKTLAPGLRLGYVVAPPE-LIEKLL-RLKQAAD 328 (459)
T ss_pred HHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC--CCCEEEEeeehhhcccccceeeeeCCHH-HHHHHH-HHHHHhc
Confidence 999999999999999998766643221 11111 1125788889999998888999888532 222110 0000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh--HHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG--LKGLQAYLRKHIS 260 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~~~~~~~~~~ 260 (367)
. .+..+....+...+. -| ...+.++.+...+
T Consensus 329 ~----------------------------------------------~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~ 361 (459)
T COG1167 329 L----------------------------------------------GPSSLSQAALAAFLL-SGHYDRHLRRLRREYAR 361 (459)
T ss_pred C----------------------------------------------CCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 0 000011122222222 22 3345555666667
Q ss_pred HHHHHHHHhcCCC--CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-C----CeeEEEEEecCCCCC
Q psy3048 261 LAKKFADLVEKDD--RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-Q----GRPFLRFVVTSPETN 333 (367)
Q Consensus 261 la~~l~~~L~~~~--g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~----~~~~lRi~~~~~~~~ 333 (367)
..+.+.+.|++.. ++....|..-..+++++++ .-...++.++..++|.....++.. . ...++|++++. .+
T Consensus 362 rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~-~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~ 438 (459)
T COG1167 362 RRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PS 438 (459)
T ss_pred HHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCC-CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CC
Confidence 7777788887763 3333334433344556654 334678888888888654442222 1 24589997743 46
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy3048 334 QCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~~ 352 (367)
++++++.+..|.+++.+..
T Consensus 439 ~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 439 EEEIEEGIKRLAALLREAA 457 (459)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8999999999998887654
No 287
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.41 E-value=1.4e-11 Score=117.91 Aligned_cols=242 Identities=10% Similarity=-0.033 Sum_probs=142.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~ 106 (367)
.-.|++++.+|..+..+++..|++++.++ +++++++ +. +.+|+++.++|+||.+- ++++|.
T Consensus 111 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-------~~~~l~~---~~------~~~v~~~~p~NPtG~~~~~~~~~~i~ 174 (364)
T PRK07865 111 GDVVVIPELAYPTYEVGARLAGATVVRAD-------SLTELGP---QR------PALIWLNSPSNPTGRVLGVDHLRKVV 174 (364)
T ss_pred CCEEEECCCCcccHHHHHHhcCCEEEecC-------ChhhCCc---cc------ceEEEEcCCCCCCCccCCHHHHHHHH
Confidence 44577788899999888888999888774 2333332 22 35777788999999884 567888
Q ss_pred HHHhhcCcEEEEecccccccccChhhh---hhhCCCC-Ccceeeecccccccc-CCcceeEEEecchhhhhhccCCcccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYA---HLKRGLE-YVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~---~~~~~~~-~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
++|++||+++++|++|+...+..+... ....+.. .-.+++.+..|.+.. ...+|+++. +++.+...... ..+.
T Consensus 175 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~~~~~~-~~~~ 252 (364)
T PRK07865 175 AWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVAELLEV-RKHA 252 (364)
T ss_pred HHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHHHHHHH-HHhc
Confidence 999999999999999975433211100 0000000 114778889999854 356777665 33333221100 0000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHIS 260 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~ 260 (367)
. +.. ..+...++.+.+. .+.+++..++..+
T Consensus 253 ~-------------------------------------------~~~------~~~~q~~~~~~l~~~~~~~~~~~~~~~ 283 (364)
T PRK07865 253 G-------------------------------------------MMV------PAPVQAAMVAALGDDAHVREQRERYAR 283 (364)
T ss_pred C-------------------------------------------CCc------CHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 0 000 0011112222222 2345566667778
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEEecCCCCCHHHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~~edid 338 (367)
..+++.+.|++. |+.+..++....+.+.+. ....++.+.|.++|+....+..+. +..++|++++. ++++++
T Consensus 284 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~ 356 (364)
T PRK07865 284 RRAVLRPALEAA-GFRVDHSEAGLYLWATRG---EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIA 356 (364)
T ss_pred HHHHHHHHHHHc-CCcccCCCccEEEEEeCC---CCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHH
Confidence 888888888886 776554432222333332 124567788888885433322222 35699998753 589999
Q ss_pred HHHHHHH
Q psy3048 339 FAWNEIS 345 (367)
Q Consensus 339 ~li~~l~ 345 (367)
++++.|+
T Consensus 357 ~~~~~l~ 363 (364)
T PRK07865 357 AAVERLA 363 (364)
T ss_pred HHHHHhh
Confidence 9988874
No 288
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.41 E-value=4.6e-11 Score=113.30 Aligned_cols=235 Identities=11% Similarity=-0.010 Sum_probs=145.6
Q ss_pred EEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH---H
Q psy3048 33 AYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI---C 109 (367)
Q Consensus 33 v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l---~ 109 (367)
|++.+.++......++..|++++.++.++ +.+. +.. .++++++|+||||.+-+.+++.++ |
T Consensus 96 v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~~~----~~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~ 159 (339)
T PRK06959 96 VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DTLP----AAL------THLIVVNPNNPTAERLPAARLLRWHAQL 159 (339)
T ss_pred EEEcCCCcHHHHHHHHHCCCEEEeecccc------hhcc----ccC------CEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 45577888888889999999999887643 2222 222 378899999999999666666554 5
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
++++.++++|++|.-+... +.... .....+ -++..+..|.++ .+..+|+++.. ++.+........+
T Consensus 160 ~~~~~~vI~DEay~~~~~~-~s~~~-~~~~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~--------- 226 (339)
T PRK06959 160 AARGGTLIVDEAFADTLPA-ASLAA-HTDRPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGA--------- 226 (339)
T ss_pred HHcCCEEEEECCCccCCCc-ccchh-ccCCCC-EEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCC---------
Confidence 6789999999999754321 11111 101111 256677899987 55778888874 3333322111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l~~ 267 (367)
| . ...+...++...+. .+-.++..++..+..+++.+
T Consensus 227 ------~-------------------------------~------vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~ 263 (339)
T PRK06959 227 ------W-------------------------------T------VSGPARHAVRAAFADAAWQAAMRERLAADGARLAA 263 (339)
T ss_pred ------C-------------------------------C------CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00122222222222 22345556677778888999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.|+++ |+++. +..+.+.++++ ...++.+.|.++|+. +.. +....++||++.. +.+|+++++++|+++
T Consensus 264 ~L~~~-g~~~~--~~~~f~~~~~~----~~~~l~~~l~~~GI~-vr~--~~~~~~lRisi~~---~~~e~~~l~~al~~~ 330 (339)
T PRK06959 264 LLRAH-GFAVH--ATPLFSWTDDP----RAAALHAALARRGIW-TRY--FAPPPSVRFGLPA---DEAEWQRLEDALAEC 330 (339)
T ss_pred HHHHC-CCCcc--CcceEEEEeCC----CHHHHHHHHHhCCeE-EEE--CCCCCeEEEECCC---CHHHHHHHHHHHHHH
Confidence 99887 77654 22233344432 256789999999854 432 2344689997532 578999999999998
Q ss_pred HHHhh
Q psy3048 348 SSEMN 352 (367)
Q Consensus 348 ~~~~~ 352 (367)
.+.+.
T Consensus 331 ~~~~~ 335 (339)
T PRK06959 331 VPTLA 335 (339)
T ss_pred HHHHh
Confidence 87664
No 289
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.40 E-value=2.3e-11 Score=120.40 Aligned_cols=128 Identities=12% Similarity=0.072 Sum_probs=89.5
Q ss_pred eEEEecCCcchhHHHHHHhCCc--ceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDV--PVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~--~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
-.|++.+..+......+++.|. +++.++.+ +++.+|+++|++++.+.++ +|++++|+||||.+-+ ++
T Consensus 191 D~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~nP~NPTG~v~s~e~l~ 264 (527)
T PRK09275 191 DKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVNPSNPPSVAMSDESLE 264 (527)
T ss_pred CEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeCCcCCcCCCCCHHHHH
Confidence 3455567788888888887755 44555543 3589999999998766553 7788899999999955 78
Q ss_pred hHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecc
Q psy3048 104 ELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNA 167 (367)
Q Consensus 104 ~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~ 167 (367)
+|+++|++ +|+++++|++|+..... +.........--+++.+..|.++ +++.+|+++....
T Consensus 265 ~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 265 KIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred HHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 88889954 59999999999764321 11111111111466677899985 5588999887654
No 290
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.40 E-value=3.4e-11 Score=117.46 Aligned_cols=258 Identities=12% Similarity=0.061 Sum_probs=137.1
Q ss_pred eEEEecCCcchhHHHHHHhCC----cceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC--
Q psy3048 31 LVAYASDQSNSSVEKSAIIGD----VPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-- 101 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g----~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-- 101 (367)
.+++..+.++..+...+...+ ..++.++.+. ++.+|+++|+ +.+. +.+++++.++||||.+-+
T Consensus 128 ~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~------~~~i~l~~P~NPTG~~~s~~ 199 (416)
T PRK09440 128 KILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDED------TGAICVSRPTNPTGNVLTDE 199 (416)
T ss_pred eEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCC------ceEEEEecCCCCCCccCCHH
Confidence 344424556666555444322 2223333332 3678999987 2222 358888999999999954
Q ss_pred -hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 102 -LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 102 -l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+++|+++|++||+++++|++|+-.. ....+.........--++..+..|.+.....+|+++.. +..++...... .+
T Consensus 200 ~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~-~~l~~~~~~~~-~~ 276 (416)
T PRK09440 200 ELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIAD-EEIIEALSNMN-GI 276 (416)
T ss_pred HHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCcceEEEEeCC-HHHHHHHHHHH-HH
Confidence 7888889999999999999996321 11001110000111125567889976555778887753 33332211000 00
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHH----H-HH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQ----A-YL 255 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~-~~ 255 (367)
... + ...+...++...+....+. + ..
T Consensus 277 ~~~-------------------------------------------~------~s~~~q~~~~~~l~~~~~~~~~~~~~~ 307 (416)
T PRK09440 277 ISL-------------------------------------------A------PGRLGPAIAAEMIESGDLLRLSETVIR 307 (416)
T ss_pred hcc-------------------------------------------C------CCcHHHHHHHHHhccchHHHHHHHHHH
Confidence 000 0 0012222222222111111 1 22
Q ss_pred HHHHHHHHHHHHHhcCC-C--CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EEC-C--------eeE
Q psy3048 256 RKHISLAKKFADLVEKD-D--RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQ-G--------RPF 322 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~-~--g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~-~--------~~~ 322 (367)
+...+..+.+.+.|.+. + ++.+..|.....+++.++.......++.+.+.++|+. +.++ .+. + ..+
T Consensus 308 ~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~-v~pg~~F~~~~~~~~~~~~~~ 386 (416)
T PRK09440 308 PFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVL-VVPGHYFFPGLDEDWPHAHQC 386 (416)
T ss_pred HHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEE-EechHhhCCCCccccCCcCce
Confidence 22333344444444332 2 4555445455666666653112346788888778754 4443 221 1 248
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+|++++. ++++++.+++.|++++++..
T Consensus 387 iRis~~~---~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 387 IRMNYVQ---DDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred EEEEecC---CHHHHHHHHHHHHHHHHHHh
Confidence 9998752 58999999999999987654
No 291
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=9.3e-11 Score=111.02 Aligned_cols=236 Identities=10% Similarity=0.030 Sum_probs=151.4
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
.|++.+.++......++..|++++.++.++++.++... +. . ..++++++++||||.+-+.+++.+++ +
T Consensus 98 ~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~~-~------~~~i~i~nP~NPTG~~~s~~~l~~l~-~ 165 (335)
T PRK14808 98 RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----VG-E------GDVVFIPNPNNPTGHVFEREEIERIL-K 165 (335)
T ss_pred cEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----cc-C------CCEEEEeCCCCCCCCCcCHHHHHHHH-h
Confidence 35667789999999999999999999997777665332 21 1 24788999999999999999999998 5
Q ss_pred cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCCC
Q psy3048 112 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNT 190 (367)
Q Consensus 112 ~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 190 (367)
+++++++|++|.-+. ............+ -+++.+..|.++ ....+|+++... +.+.........
T Consensus 166 ~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~-~~~~~l~~~~~~----------- 230 (335)
T PRK14808 166 TGAFVALDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE-KFIDAYNRVRLP----------- 230 (335)
T ss_pred cCCEEEEECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH-HHHHHHHHhcCC-----------
Confidence 899999999986532 1111111111111 356677899998 457789988743 333221110000
Q ss_pred CCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Q psy3048 191 QSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVE 270 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~ 270 (367)
+ .. ..+....+.+++.. .+.+.+..++..+..+++.+.|+
T Consensus 231 ----~-------------------------------~~---~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~ 270 (335)
T PRK14808 231 ----F-------------------------------NV---SYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALR 270 (335)
T ss_pred ----C-------------------------------CC---CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00111222223321 22345555566666788888888
Q ss_pred CCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 271 KDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 271 ~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
++ |+.+. +++.+.+.+++++. ...++.+.|.++|+ .+.. + ..++||++. +.++.++++++|+++
T Consensus 271 ~~-g~~~~-~~~g~f~~~~l~~~--~~~~~~~~l~~~Gi-~V~~--~--~~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 271 EM-GYRIT-DSRGNFVFIFMEKE--EKERLLEHLRAKNI-AVRS--F--REGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred HC-CCEEC-CCCCeEEEEeCCCc--cHHHHHHHHHHCCe-EEEE--C--CCCeEEecC----CHHHHHHHHHHHHhh
Confidence 87 77755 45667777777532 24678888998985 3432 2 247999764 478999999999764
No 292
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.39 E-value=1.4e-10 Score=111.52 Aligned_cols=213 Identities=13% Similarity=0.108 Sum_probs=123.0
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+.+.+ .+|++....++.|... ++++|.++|++||+++++|++|.++......+.....++ .
T Consensus 156 d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~ 228 (377)
T PRK02936 156 DIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGL-D 228 (377)
T ss_pred CHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCC-C
Confidence 7899999886544 4677777777666653 399999999999999999999975433221111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++ +..|.+++...+|+++.++ + +...+. .... .
T Consensus 229 ~di~--t~sK~l~~G~~ig~v~~~~-~-~~~~~~-------~~~~-----~----------------------------- 263 (377)
T PRK02936 229 PDIV--TVAKGLGNGIPVGAMIGKK-E-LGTAFG-------PGSH-----G----------------------------- 263 (377)
T ss_pred CcEE--EEcccccCCCccEEEEEcH-H-HHhhcc-------CCCC-----C-----------------------------
Confidence 3654 4689988554577776632 2 222111 0000 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcCCchHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKGDNDLT 297 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~~~~~~ 297 (367)
.+. .+..+.+.+..++++.+.. ++..++..++.+++++.|++ ++.+..+. +...++.+.+.. . .
T Consensus 264 ----~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~~~-~--~ 331 (377)
T PRK02936 264 ----STF-GGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLMIGIECTE-E--V 331 (377)
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceEEEEEecc-h--H
Confidence 000 0111223344444444321 23445555666666666654 33322221 223456666643 2 5
Q ss_pred HHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 298 NQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 298 ~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
..+.+.|.++|.+ +.+ .+..++|+++ +...++++++++++.|+++
T Consensus 332 ~~~~~~l~~~gv~-v~~---~g~~~lRi~p-~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 332 APVIEQLREEGLL-VLS---AGPNVIRLLP-PLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHHCCeE-Eec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 6788888888854 332 3446899965 4556899999999999875
No 293
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.39 E-value=6.7e-13 Score=122.24 Aligned_cols=139 Identities=19% Similarity=0.208 Sum_probs=96.7
Q ss_pred CceEEEecCCcchhHHHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc---CC
Q psy3048 29 SRLVAYASDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF---DN 101 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i---~d 101 (367)
+...|++.+.+|+.+++.. .+.|++++.++.+++|.+|+++|++.+++...+...|.+|+++.+++.. |.+ ++
T Consensus 67 ~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~e 146 (290)
T PF01212_consen 67 PGESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEE 146 (290)
T ss_dssp TTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHH
T ss_pred cCCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHH
Confidence 4678899999999886652 4589999999986669999999999999866555557788888765543 766 57
Q ss_pred hhhHHHHHhhcCcEEEEecccccccccC--hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhh
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGSALLL--PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~~~~~--~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~ 172 (367)
|++|.++||+||+++|+|||--+..... ...+... ..+|+++++++|.++.| .|.+++.+++.+++
T Consensus 147 l~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~--~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 147 LRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAP--GGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SS--SEEEEEESHHHHHH
T ss_pred HHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEcccccc--cceEEEechHHHHH
Confidence 7888889999999999999853222110 1112222 35699999999999987 33444444554443
No 294
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.38 E-value=7.6e-11 Score=111.78 Aligned_cols=248 Identities=18% Similarity=0.263 Sum_probs=160.2
Q ss_pred CceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChh
Q psy3048 29 SRLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
++.+|...+ .+-....-+ ...|+++.+++.. +.+++++++.+ ++ .+|.+-.|+|++.-+.||+
T Consensus 102 GD~vl~~~~-~YG~t~~~~~~~l~~~gi~~~~~d~~-----~~~~~~~~~~~~~t------k~v~lEtPsNP~l~v~DI~ 169 (396)
T COG0626 102 GDHVLLPDD-LYGGTYRLFEKILQKFGVEVTFVDPG-----DDEALEAAIKEPNT------KLVFLETPSNPLLEVPDIP 169 (396)
T ss_pred CCEEEecCC-ccchHHHHHHHHHHhcCeEEEEECCC-----ChHHHHHHhcccCc------eEEEEeCCCCcccccccHH
Confidence 355555544 444443333 3478899988764 56677777764 66 4899999999999999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc-eeEEEecchhhhhhccCCccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC-SAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+|+++||++|+.++||..++.+.+.-+ ..-| +|+++.|..|++++-..+ |.+++.+.+.+.+.. .+..
T Consensus 170 ~i~~~A~~~g~~vvVDNTfatP~~q~P----L~~G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~----~~~~ 238 (396)
T COG0626 170 AIARLAKAYGALVVVDNTFATPVLQRP----LELG---ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELL----FFAQ 238 (396)
T ss_pred HHHHHHHhcCCEEEEECCcccccccCh----hhcC---CCEEEEeccccccCCcceeeeEEecChHHHHHHH----HHHH
Confidence 999999999999999999987665322 1123 599999999999976442 223332333232211 0000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. ..+....++..|..++ |.+-+.-+++++.+++
T Consensus 239 ~~--------------------------------------------~~G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA 272 (396)
T COG0626 239 RA--------------------------------------------NTGAVLSPFDAWLLLR--GLRTLALRMERHNENA 272 (396)
T ss_pred Hh--------------------------------------------hcCCCCCHHHHHHHHh--ccchHHHHHHHHHHHH
Confidence 00 0001112244454443 6777888899999999
Q ss_pred HHHHHHhcCCCCeE-EeCCC----------------CceeEEEEEcCCchHHHHHHHHHhccC------cE---EEEE--
Q psy3048 263 KKFADLVEKDDRFE-LVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMSHK------QI---YIIK-- 314 (367)
Q Consensus 263 ~~l~~~L~~~~g~~-~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g------~~---~~~~-- 314 (367)
..+.+.|+++|.++ +..|. ..++++|.+.+. +...++.+.|.--. .+ ...|
T Consensus 273 ~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~ 351 (396)
T COG0626 273 LKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSLKLFKLAESLGGVESLISHPAT 351 (396)
T ss_pred HHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhCCccEEeccCCCcccccccccc
Confidence 99999999999886 45442 357899999863 44556666654211 00 0111
Q ss_pred eEE------------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 315 ASF------------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 315 ~~~------------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..+ -..+.+|+|+. -||++.+++.|++.++.+
T Consensus 352 ~th~~~~~~~r~~~Gi~~~LvRlSVG-----lEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 352 MTHASIPLEERAKAGITDGLVRLSVG-----LEDVEDLIADLEQALAKA 395 (396)
T ss_pred cCcccCCHhHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHHhh
Confidence 011 02568999874 378999999999887754
No 295
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.38 E-value=2.8e-10 Score=110.23 Aligned_cols=217 Identities=13% Similarity=0.112 Sum_probs=125.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++.+.+ .+|++..+.+++|.. +.+++|.++|++||+++++|++|+++............++ .
T Consensus 171 d~~~l~~~i~~~~------~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~ 243 (396)
T PRK02627 171 DIEALKAAITDKT------AAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-E 243 (396)
T ss_pred CHHHHHHhcCCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-C
Confidence 8999999885433 477777777777743 3589999999999999999999986432211111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++ ..|.+.++..+|+++.++. ... .+. .... ...|
T Consensus 244 pdi~t--~sK~~~~G~rig~~~~~~~-~~~-~~~-------~~~~-----~~t~-------------------------- 281 (396)
T PRK02627 244 PDIMT--LAKGLGGGVPIGAVLAKEK-VAD-VFT-------PGDH-----GSTF-------------------------- 281 (396)
T ss_pred CCEEE--EcchhhCCcccEEEEEcHH-HHh-ccC-------CCCC-----CCCC--------------------------
Confidence 36555 4588886667888887432 221 111 0000 0000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCCchHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGDNDLT 297 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~~~~~ 297 (367)
.+..+......++++.+.. ++..++.+++.++++++|.++ +.+..+ ......+.+.+.. ..
T Consensus 282 --------~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~---~~ 346 (396)
T PRK02627 282 --------GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDR---PA 346 (396)
T ss_pred --------CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecC---cH
Confidence 0111112233334443322 234455666666666666543 222211 1223445555522 25
Q ss_pred HHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 298 NQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 298 ~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.++.+.|.++|+ .+.+. +..++|+++ +...++++++++++.|+++++++
T Consensus 347 ~~~~~~l~~~Gv-~v~~~---~~~~lRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 347 AEIVKKALEKGL-LINVT---GDNVLRLLP-PLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHCCe-EEeec---CCCEEEEEC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 688889998884 44432 346799965 44567999999999999987753
No 296
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.38 E-value=4e-11 Score=114.55 Aligned_cols=239 Identities=11% Similarity=0.011 Sum_probs=140.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.-.|++++.+|..+...+...|++++.++ +++.++. +. +.+|++++++|++|.+-+ +++|.
T Consensus 105 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l~~---~~------~~~v~~~~p~NPtG~~~~~~~~~~i~ 168 (357)
T TIGR03539 105 GDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTELDP---VG------PDLIWLNSPGNPTGRVLSVDELRAIV 168 (357)
T ss_pred CCEEEECCCCcHHHHHHHHhcCCEEeccC-------ChhhcCc---cC------ccEEEEeCCCCCcCccCCHHHHHHHH
Confidence 34677788999988888888898887763 2333321 22 357778899999999854 67799
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhC----CC-CCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKR----GL-EYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~----~~-~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
++|++||+++++|++|+...+..+.. ..+. +. ..-.++..+..|.+.. ...+|+++. +++.+....... ..
T Consensus 169 ~~a~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~~~~~~~-~~ 245 (357)
T TIGR03539 169 AWARERGAVVASDECYLELGWEGRPV-SILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVAELLTVR-KH 245 (357)
T ss_pred HHHHHcCeEEEEecchhhhccCCCCc-cceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHHHHHHHH-hh
Confidence 99999999999999996533311110 0000 00 0113677789999743 355788764 333332211000 00
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHI 259 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~ 259 (367)
. . + . . ..+...++...+ ....++...++..
T Consensus 246 ~-~-----------~-------------------------------~---~---~~~~q~~~~~~l~~~~~~~~~~~~~~ 276 (357)
T TIGR03539 246 A-G-----------L-------------------------------M---V---PAPVQAAMVAALGDDGHVAEQKARYA 276 (357)
T ss_pred c-c-----------c-------------------------------C---C---CHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0 0 0 0 0 011112222222 1234555666677
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---CCeeEEEEEecCCCCCHHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---QGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~ed 336 (367)
+..+++.+.|++. |+.+.. |..+.+.+...+ . ...++.+.|.++|+ .+.++.+ .+..++|+++.. ++++
T Consensus 277 ~~~~~~~~~L~~~-g~~~~~-p~~~~~~~~~~~-~-~~~~~~~~l~~~gV-~v~pg~~f~~~~~~~iRis~~~---~~~~ 348 (357)
T TIGR03539 277 ARRAQLKPALEKA-GFRIDH-SEAGLYLWATRG-E-DAWDTVDRLAELGI-LVAPGDFYGPAGSQHVRVALTA---TDER 348 (357)
T ss_pred HHHHHHHHHHHHc-CCCCcC-CCccEEEEEECC-C-CHHHHHHHHHhCCE-EECCccccCCCCCCeEEEEecC---CHHH
Confidence 7788888888885 776543 444443332222 1 24578888888885 4444332 235799998753 5788
Q ss_pred HHHHHHHH
Q psy3048 337 VAFAWNEI 344 (367)
Q Consensus 337 id~li~~l 344 (367)
++.+++.|
T Consensus 349 i~~~~~~l 356 (357)
T TIGR03539 349 IAAAVARL 356 (357)
T ss_pred HHHHHHhh
Confidence 98888765
No 297
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.36 E-value=6.9e-10 Score=108.39 Aligned_cols=233 Identities=11% Similarity=0.101 Sum_probs=131.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+++.........+|++.-.....|.+ +.+++|.++|++||+++++|+.|+++......+.....++ .
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~ 259 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI-T 259 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC-C
Confidence 6788888886542111223456665555555654 3799999999999999999999976433222111111233 3
Q ss_pred cceeeecccccccc-CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++++ |.++. ...+|+++.++. +. .+. ... . .. .|
T Consensus 260 PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~~--~~~-----~---~~--T~------------------------- 297 (425)
T PRK09264 260 PDIVTLS--KSISGYGLPMALVLIKPE--LD-VWK--PGE-----H---NG--TF------------------------- 297 (425)
T ss_pred CCEEEec--cccCCCccceEEEEEchh--hh-ccC--CCc-----c---CC--CC-------------------------
Confidence 5877774 98765 344688887533 21 110 000 0 00 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCc-eeEEEEEcCCch
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPPSM-GLVCFRLKGDND 295 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~-~~v~f~~~~~~~ 295 (367)
. +.........++++.+..+ .++.++..++.++++++|+++ |.+ +...+.. .++.+.+.. ..
T Consensus 298 ------~---gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~-~~ 364 (425)
T PRK09264 298 ------R---GNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD-GE 364 (425)
T ss_pred ------C---CCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC-hH
Confidence 0 1111122333444222111 245566677777777766543 222 1112222 333555543 34
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCC
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGS 357 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~ 357 (367)
...++.+.+.++|.+ +.+... ....+|+++ ....+++||+++++.|++.++++.++.++
T Consensus 365 ~~~~l~~~~~~~Gv~-~~~~~~-~~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~~~~~ 423 (425)
T PRK09264 365 LAGKIAAEAFENGLI-IETSGP-EDEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLAEEES 423 (425)
T ss_pred HHHHHHHHHHHCCCE-EeccCC-CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 456888889999954 333211 235899964 56678999999999999999887554443
No 298
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.36 E-value=2.7e-10 Score=110.08 Aligned_cols=270 Identities=9% Similarity=0.003 Sum_probs=155.3
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEE---EecCCCC----CcCHHHHHHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQ---LRSDDNG----VLRGDALLTAV 74 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~---v~~~~~~----~~d~~~L~~~l 74 (367)
.||++||.+..+. ++ .++.+|......|-+...++...|..... .+...+. ..|+++|++.+
T Consensus 108 ~Aik~ar~~~~~~----~~-------~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 176 (395)
T PRK03715 108 GAIKLARKWGRKH----KN-------GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI 176 (395)
T ss_pred HHHHHHHHHhhcc----CC-------CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHc
Confidence 4778888764311 01 12345666777888888777766543111 1111111 24788999888
Q ss_pred HHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc
Q psy3048 75 KEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH 150 (367)
Q Consensus 75 ~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h 150 (367)
.+.+ .+|++....+..|.+.| +++|.++|++||+++++|++|+++.....-+.....++ ..|+++++
T Consensus 177 ~~~~------aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g-- 247 (395)
T PRK03715 177 TDKT------VAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPDIMTLG-- 247 (395)
T ss_pred CCCc------eEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCceeeeh--
Confidence 6433 46777777777788777 99999999999999999999986422221111111234 36887764
Q ss_pred cccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccc
Q psy3048 151 KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPL 230 (367)
Q Consensus 151 K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (367)
|.++++..+|.++.+++- . .+ .+.+..+ +. .
T Consensus 248 K~lg~G~p~~av~~~~~i-~--~~--~~~~~~~-------------------------------------------T~-~ 278 (395)
T PRK03715 248 KGIGGGVPLAALLAKAEV-A--VF--EAGDQGG-------------------------------------------TY-N 278 (395)
T ss_pred hhhhCCcceEEEEEcccc-c--cc--cCCCcCC-------------------------------------------CC-C
Confidence 888876557777765432 1 01 0111000 00 0
Q ss_pred cccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCchHHHHHHHH---H
Q psy3048 231 SRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDNDLTNQLYER---L 304 (367)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~---L 304 (367)
+....+....++|+.+.. +++.++.+++.++++++|+++ .++.-+ .-...++.+.+.. + ....+.+. +
T Consensus 279 g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~-~-~~~~~~~~~~~~ 352 (395)
T PRK03715 279 GNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGK-D-IGPQIVEKARDM 352 (395)
T ss_pred CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecC-c-hHHHHHHHHHhc
Confidence 111223344455555533 345677888888888888754 122211 1123444555543 1 12334433 3
Q ss_pred hccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 305 MSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 305 ~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.++|.+ +.+ .+...+|+++ ....|++|||.+++.|++.++++
T Consensus 353 ~~~Gi~-~~~---~~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 353 QPDGLL-LNA---PRPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cCCCEE-Eee---cCCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 444743 322 1235899965 57788999999999999998764
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.35 E-value=4.8e-10 Score=110.13 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=141.2
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|.+++++++++...++....+|++.......|.+.| ++++.++|++||+.+++|++|.++.....-+.....++ .
T Consensus 214 d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~ 292 (459)
T PRK11522 214 NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-Q 292 (459)
T ss_pred CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-C
Confidence 788899988754333333456777766677788877 99999999999999999999975432222111112344 3
Q ss_pred cceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+++. ..+|.++.+++ ... .+... ++...
T Consensus 293 PDivt~--gK~lggG~~Pigav~~~~~-i~~-~~~~~-~~~~~------------------------------------- 330 (459)
T PRK11522 293 PDILCL--AKALGGGVMPIGATIATEE-VFS-VLFDN-PFLHT------------------------------------- 330 (459)
T ss_pred CCEEEe--chhhhCCCccceeEEEcHH-HHH-HhccC-CcccC-------------------------------------
Confidence 587654 6888764 24777777543 222 11100 11100
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeE-EeCC-C-CceeEEEEEcCCchH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFE-LVCP-P-SMGLVCFRLKGDNDL 296 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~-~~~~-~-~~~~v~f~~~~~~~~ 296 (367)
++-.++...+.+..+.|+.+..+ +..++..++.++|+++|+++. ++. ++.. . ...++.+.+.. +..
T Consensus 331 ------~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~-~~~ 400 (459)
T PRK11522 331 ------TTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD-NEI 400 (459)
T ss_pred ------CCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC-chH
Confidence 00011112234445556665443 356788888899988887652 121 1211 1 22344455543 334
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
...+.+.|.++|. ++.+.. .+...+|+.+ ....+++|||.++++|+++++++.+.
T Consensus 401 ~~~i~~~l~~~Gv-l~~~~~-~~~~~lr~~P-pl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 401 GYNFASEMFRQRV-LVAGTL-NNAKTIRIEP-PLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred HHHHHHHHHHCCe-EEEecC-CCCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888999984 443332 2346899965 56678999999999999998876544
No 300
>PLN02368 alanine transaminase
Probab=99.35 E-value=1.1e-10 Score=113.13 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=97.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++.+.++......+...|++++.+++++ ++.+|+++|++++++..+++..+.++++++++|+||.+ +.+++
T Consensus 155 Gd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~ 234 (407)
T PLN02368 155 KDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLRE 234 (407)
T ss_pred CCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHH
Confidence 34566678899999999999999999999863 48899999999997643222234678899999999998 56777
Q ss_pred HHHHHhhcCcEEEEecccccccccCh-hhhh---hhCC----CC-Cc-ceeeeccccccc--cCCcceeEEE
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP-EYAH---LKRG----LE-YV-DSFAFNAHKWLL--TNHDCSAMWV 164 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~-~~~~---~~~~----~~-~~-D~~~~~~hK~l~--~p~g~g~l~~ 164 (367)
|+++|++||+++++|++|+-..+... .+.. ...+ .+ .. -++..+..|.+. .+..+|+++.
T Consensus 235 l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 235 ILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 88899999999999999977554221 1100 0001 11 11 245566799874 5678898875
No 301
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.34 E-value=3e-10 Score=106.30 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=144.1
Q ss_pred ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEeccccccccc
Q psy3048 53 PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALL 128 (367)
Q Consensus 53 ~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~ 128 (367)
.++.+|.+ |+++++++++++| ..|++--..-.-|++ +=++++.++|++||++++.|+.|.+...-
T Consensus 165 g~~~vpfn-----Di~al~~ai~~~t------aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRT 233 (404)
T COG4992 165 GFRHVPFN-----DIEALEAAIDEDT------AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRT 233 (404)
T ss_pred CceecCCC-----CHHHHHHHhccCe------EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCcc
Confidence 35666665 9999999999976 356666555556665 34688999999999999999999876543
Q ss_pred ChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCc
Q psy3048 129 LPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLP 208 (367)
Q Consensus 129 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (367)
..-+....-++ ..|+++. -|.+++..-+|.++.+ +... .. +..+..
T Consensus 234 Gk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA~la~-~~~~-~~-------~~~G~H---------------------- 279 (404)
T COG4992 234 GKLFAYEHYGV-EPDILTL--AKALGGGFPIGAMLAT-EEIA-SA-------FTPGDH---------------------- 279 (404)
T ss_pred chHHHHHHhCC-CCCEEEe--eccccCCccceeeEEc-hhhh-hc-------CCCCcc----------------------
Confidence 33222222233 3477665 5888887778888875 2211 11 111111
Q ss_pred chhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-ee
Q psy3048 209 EEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GL 285 (367)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~ 285 (367)
-++-+++...+....++++.+.. +++.++.+++.++|.++|+++. .+.++.+ ... -+
T Consensus 280 -----------------gSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLm 339 (404)
T COG4992 280 -----------------GSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLM 339 (404)
T ss_pred -----------------cCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeE
Confidence 01111222222333344554444 4455677888888988888863 2333332 222 23
Q ss_pred EEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 286 VCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 286 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+-+.+.. +.....+...+.++|.+... .+..++|+.+ ....+++|+|..+++|+++++....
T Consensus 340 iGiel~~-~~~a~~~~~~~~~~gvL~~~----a~~~ViR~~P-pL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 340 IGIELKE-PYRARDIVRALREEGVLVLP----AGPNVIRFLP-PLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred EEEEecC-cccHHHHHHHHHHCCeEEec----CCCCeEEecC-CccCCHHHHHHHHHHHHHHHHHhhh
Confidence 4455543 21357889999999954332 3456999954 5778999999999999999886543
No 302
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.31 E-value=1e-09 Score=105.56 Aligned_cols=247 Identities=15% Similarity=0.122 Sum_probs=138.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcce---------EEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPV---------RQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v---------~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
+.+|..+...|-+...++...|.+. ..++. .-..|++++++.+++.+ .+|++..+.+++|.+.
T Consensus 111 ~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dl~~l~~~l~~~~------a~vi~e~v~~~~G~~~ 182 (375)
T PRK04260 111 QEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSY--AIFNDLNSVKALVNKNT------AAVMLELVQGESGVLP 182 (375)
T ss_pred CeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEE--eCCCCHHHHHHhcCCCe------EEEEECCeECCCCCcC
Confidence 4456666777877766665443321 11111 01238899998885432 4778888888888875
Q ss_pred C----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC
Q psy3048 101 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT 176 (367)
Q Consensus 101 d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 176 (367)
+ +++|.++|+++|+++++|++|.+.............++ ..|++ +..|.++.....|+++.++. +...+.
T Consensus 183 ~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~--~~~~~~- 256 (375)
T PRK04260 183 ADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAKSS--LGGAFG- 256 (375)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEcHH--HHhhcC-
Confidence 4 89999999999999999999975432211111111223 24644 56898875556788887532 211111
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
... . ...| .+....+....+.++.+..++ ..+
T Consensus 257 -----~~~-~-----~~t~----------------------------------~~~~~~~~aa~a~l~~~~~~~---~~~ 288 (375)
T PRK04260 257 -----YGS-H-----GSTF----------------------------------GGNKLSMAAASATLDIMLTAG---FLE 288 (375)
T ss_pred -----CCC-C-----CCCC----------------------------------CcCHHHHHHHHHHHHHHHhhH---HHH
Confidence 000 0 0000 011122233444454443333 333
Q ss_pred HHHHHHHHHHHHh----cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCC
Q psy3048 257 KHISLAKKFADLV----EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPET 332 (367)
Q Consensus 257 ~~~~la~~l~~~L----~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 332 (367)
+.++..+++++.| .+.+.+.-+. .....+.+.+.. ...++.+++.++|+. +.+ .+...+|+++ +...
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~---~~~~~~~~l~~~Gi~-v~~---~~~~~lR~~~-~~~~ 359 (375)
T PRK04260 289 QALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTA---DLSQLVEAARDKGLI-VLT---AGTNVIRLLP-PLTL 359 (375)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecC---cHHHHHHHHHhCCCE-Eec---CCCCEEEEcC-CCcc
Confidence 4444445544444 4443222221 123344554422 256888999999964 332 2446899965 4666
Q ss_pred CHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQ 347 (367)
Q Consensus 333 ~~edid~li~~l~~~ 347 (367)
+++|++++++.|+++
T Consensus 360 t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 360 TKEEIEQGIAILSEV 374 (375)
T ss_pred CHHHHHHHHHHHHHh
Confidence 799999999999875
No 303
>KOG0053|consensus
Probab=99.31 E-value=1.9e-10 Score=108.04 Aligned_cols=229 Identities=17% Similarity=0.171 Sum_probs=149.4
Q ss_pred HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccc
Q psy3048 48 IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSAL 127 (367)
Q Consensus 48 ~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~ 127 (367)
..+|++...++++ ++++++++++++++ +|-+-.|+||+..+-||++|.++||++|+.++||...+.+..
T Consensus 138 ~~~gie~~~vd~~-----~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~ 206 (409)
T KOG0053|consen 138 PKFGGEGDFVDVD-----DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN 206 (409)
T ss_pred HHhCceeeeechh-----hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc
Confidence 3578888888876 88999999998774 899999999999999999999999999999999999987633
Q ss_pred cChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccC
Q psy3048 128 LLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKAL 205 (367)
Q Consensus 128 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 205 (367)
.+... - .||+++.|..||+++-.. .|.++.+..+...+... ...++...
T Consensus 207 -~~pL~---l---GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~-~~~~lg~~--------------------- 257 (409)
T KOG0053|consen 207 -QDPLP---L---GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF-LQEDLGWC--------------------- 257 (409)
T ss_pred -cChhh---c---CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH-HHHHhcCC---------------------
Confidence 32221 1 269999999999997644 34444443433322110 00111110
Q ss_pred CCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-EeCC----
Q psy3048 206 GLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFE-LVCP---- 280 (367)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~-~~~~---- 280 (367)
..++.++..++ |.+-+.-++++..+++..+.+.|.+.|.++ ++.|
T Consensus 258 ----------------------------~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~S 307 (409)
T KOG0053|consen 258 ----------------------------EDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPS 307 (409)
T ss_pred ----------------------------CCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCC
Confidence 12233343333 444455566778888888888888888776 4443
Q ss_pred -C-----------CceeEEEEEcCCchHHHHHHHHHhcc------CcEE---EEE---eEE--------C--CeeEEEEE
Q psy3048 281 -P-----------SMGLVCFRLKGDNDLTNQLYERLMSH------KQIY---IIK---ASF--------Q--GRPFLRFV 326 (367)
Q Consensus 281 -~-----------~~~~v~f~~~~~~~~~~~l~~~L~~~------g~~~---~~~---~~~--------~--~~~~lRi~ 326 (367)
| ..+.++|...+..+.++++++.|.-- |.+. ..| +.+ . .++.+|+|
T Consensus 308 hp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvS 387 (409)
T KOG0053|consen 308 HPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVS 387 (409)
T ss_pred CccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhhhcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEE
Confidence 1 24556676655445556677765422 2110 000 111 1 26689998
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+. -||++.+++.|.++++.+
T Consensus 388 VG-----iEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 388 VG-----IEDIEDLIKDFQQALEKA 407 (409)
T ss_pred ec-----cCCHHHHHHHHHHHHHhh
Confidence 74 378888898888887764
No 304
>PRK07049 methionine gamma-lyase; Validated
Probab=99.31 E-value=5.1e-10 Score=109.15 Aligned_cols=248 Identities=15% Similarity=0.128 Sum_probs=153.2
Q ss_pred EEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|++++..+......+ ...|++++.++. ..|+++|++++++..++. .+.+|.+..++|++|.+-|+++|.+
T Consensus 124 ~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~----~~d~~~l~~~l~~~~~~~-~tklv~lesP~NPtg~v~d~~~l~~ 198 (427)
T PRK07049 124 VILHSQPLYGGTETLLAKTFRNFGVGAVGFAD----GLSEAAIGAAAEAAAAKG-RVSLILIETPANPTNSLVDVAAVRR 198 (427)
T ss_pred EEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC----CCCHHHHHHHHHhhccCC-CceEEEEECCCCCCCcccCHHHHHH
Confidence 4556666776665543 456888766652 147888988886542111 2458888899999999999999999
Q ss_pred HHhh------cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC--cceeEEEecchhhhhhccCCcc
Q psy3048 108 ICQE------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH--DCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 108 l~~~------~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+++. +++++++|+++.......+ . . ..+|+++.+..|++++.. .+|+++. +++..+..... ..
T Consensus 199 la~~~~~~~~~~~~vvvDety~~~~~~~p-l---~---~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~~~l~~~-~~ 269 (427)
T PRK07049 199 VADAIEARQGHRPIIACDNTLLGPVFQKP-L---E---HGADLSVYSLTKYVGGHSDLVAGAVLG-RKALIRQVRAL-RS 269 (427)
T ss_pred HHHHhhhcccCCCEEEEECCccccccCCc-c---c---cCCCEEEEcCceeecCCCCcEEEEEEC-CHHHHHHHHHH-HH
Confidence 9998 8999999999765432111 1 1 135999999999999543 3555443 33333221100 00
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
.+ +.....+..|+.++. .+.+..++++..
T Consensus 270 ~~-------------------------------------------------g~~ls~~~a~l~~r~--L~tl~~R~~~~~ 298 (427)
T PRK07049 270 AI-------------------------------------------------GTQLDPHSCWMLGRS--LETLVLRMERAN 298 (427)
T ss_pred hc-------------------------------------------------CCCCCHHHHHHHHcC--CChHHHHHHHHH
Confidence 00 000112344544443 345677788889
Q ss_pred HHHHHHHHHhcCCCCeE-EeCCC------------------CceeEEEEEcCCchHHHHHHHHHhccC---------cEE
Q psy3048 260 SLAKKFADLVEKDDRFE-LVCPP------------------SMGLVCFRLKGDNDLTNQLYERLMSHK---------QIY 311 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~-~~~~~------------------~~~~v~f~~~~~~~~~~~l~~~L~~~g---------~~~ 311 (367)
+.++.+.+.|+++|++. +..|. ..++++|.+.+..+...++.+.|.--. ...
T Consensus 299 ~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli 378 (427)
T PRK07049 299 RNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLA 378 (427)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCcee
Confidence 99999999999998865 33331 135889998753333456666553211 011
Q ss_pred EEEe--EE----------C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 312 IIKA--SF----------Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 312 ~~~~--~~----------~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
..+. .+ . .++.+|+|+. -||++.+++.|++.++
T Consensus 379 ~~~~~~~h~~~~~~~~~~~gi~~~liR~svG-----lE~~~dl~~dl~~al~ 425 (427)
T PRK07049 379 SHPASMTHSGVPADVRERIGVLESTIRLSIG-----IEHPDDLIADLAQALD 425 (427)
T ss_pred eCCCccccccCCHHHHHhcCCCcCeEEEEeC-----cCCHHHHHHHHHHHHh
Confidence 1111 00 1 1458999874 3689999999998875
No 305
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.30 E-value=1.4e-09 Score=105.76 Aligned_cols=225 Identities=10% Similarity=0.088 Sum_probs=127.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++.+++.+++.......+.+|++.-.....|.+ +-+++|.++|++||+++++|+.++++......+.....++ .
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~ 255 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-E 255 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC-C
Confidence 4677888886432111123455555555556663 4679999999999999999999976433221111111233 4
Q ss_pred cceeeecccccccc-CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++++ |++++ ...+|+++.++. + ..+. +.. .. ..|
T Consensus 256 PDi~~~~--K~lg~~G~pigav~~~~~--~-~~~~--~~~--~~--------~T~------------------------- 293 (412)
T TIGR02407 256 PDIVCLS--KSISGYGLPLALTLIKPE--L-DVWK--PGE--HN--------GTF------------------------- 293 (412)
T ss_pred CCEEEec--hhccCCccceeEEEEchh--h-hccC--CCc--cC--------CCC-------------------------
Confidence 5877765 99875 555888888543 2 1111 000 00 000
Q ss_pred CccccccccccccccHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCC-ceeEEEEEcCCc
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRS-YGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPS-MGLVCFRLKGDN 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~-~~~v~f~~~~~~ 294 (367)
.+.........+.++. +..+ ++.++..++.+++.++|+. .+++. ...+. -.++.+.++. .
T Consensus 294 ---------~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~l~l~~-~ 359 (412)
T TIGR02407 294 ---------RGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELI-KQVRGRGLMQGIECGD-G 359 (412)
T ss_pred ---------CccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCce-EeeecceeEEEEEecC-h
Confidence 0111111233445553 3332 3445566666666666653 43322 22222 2344666654 3
Q ss_pred hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 295 DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 295 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
....++.+.+.++|.+ +.+... ....+|+++ ....+++|++++++.|++.+++
T Consensus 360 ~~~~~~~~~~~~~Gv~-v~~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 360 DLAGKIAKAAFENGLI-IETSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHHCCCE-EeccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHhC
Confidence 3456888899999954 433221 235799965 5778899999999999998753
No 306
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.29 E-value=1.6e-09 Score=105.06 Aligned_cols=223 Identities=14% Similarity=0.096 Sum_probs=128.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-C----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-D----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
|++.|++++++. .+..++..|...+|.+ . -+.+|.++|++||+++++|++|+++......+.....++
T Consensus 175 d~~~l~~~~~~~------~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~- 247 (408)
T PRK04612 175 DVEALEAAMAGG------DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQV- 247 (408)
T ss_pred CHHHHHHhhCCC------CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCC-
Confidence 788998888532 1344455555555544 2 289999999999999999999976433221111111122
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
..|+.+ ..|.+++...+|+++.++. .. ..+.. ... .
T Consensus 248 ~pdi~t--~~K~l~~G~piga~~~~~~-~~-~~~~~-------~~~-----~---------------------------- 283 (408)
T PRK04612 248 TPDIVT--LAKALGGGFPIGAMLAGPK-VA-ETMQF-------GAH-----G---------------------------- 283 (408)
T ss_pred CCCEEE--EcchhcCCCceEEEEECHH-HH-hhhcC-------CCc-----C----------------------------
Confidence 235444 4788876566788776532 22 11110 000 0
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CC-ceeEEEEEcCC-chH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PS-MGLVCFRLKGD-NDL 296 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~-~~~v~f~~~~~-~~~ 296 (367)
.+. .+....+....+.|+.+.. .++.++..++.+++.++|+++. .+.++.. .. -.++.+.+... ...
T Consensus 284 -----~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~ 354 (408)
T PRK04612 284 -----TTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQ 354 (408)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhH
Confidence 000 0111223344444554433 3556778888888888887642 1222221 12 22333433221 233
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
...+.+.+.++|.+ +.+ .+...+|+++ +...+++||+.+++.|++.++++.+
T Consensus 355 a~~i~~~l~~~Gvl-v~~---~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 355 AGAILDLAAEHGLL-LLQ---AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred HHHHHHHHHHCCeE-Eee---CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 56788889999954 332 3446899954 6678899999999999999887543
No 307
>KOG0257|consensus
Probab=99.28 E-value=1.3e-10 Score=108.18 Aligned_cols=130 Identities=9% Similarity=-0.009 Sum_probs=98.9
Q ss_pred cCceEEEecCCcchhHHHHHHhCCcceEEEecC--------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc
Q psy3048 28 KSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF 99 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i 99 (367)
+++.||+. +..+.+......+.|..++.|+.. .++.+|++.|+.++.+.|+ +|+++.|+|++|-+
T Consensus 116 ~GDeVii~-eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkv 188 (420)
T KOG0257|consen 116 PGDEVIVF-EPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTK------AIILNTPHNPTGKV 188 (420)
T ss_pred CCCEEEEe-cCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCcc------EEEEeCCCCCcCcc
Confidence 34555554 567777777888899999998875 4799999999999999885 89999999999988
Q ss_pred ---CChhhHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeecccccccc-CCcceeEEE
Q psy3048 100 ---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLT-NHDCSAMWV 164 (367)
Q Consensus 100 ---~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~ 164 (367)
+.|++|++||++||++++.|++|....+...++.. .++|+...-+=+.|..|.++. ++.+||++.
T Consensus 189 fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~ig 259 (420)
T KOG0257|consen 189 FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIG 259 (420)
T ss_pred cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeec
Confidence 68999999999999999999998776654431111 124443334455667887654 577888777
No 308
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.28 E-value=6e-10 Score=115.12 Aligned_cols=258 Identities=10% Similarity=0.011 Sum_probs=151.9
Q ss_pred ceEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+..|++++..|+.....++. .|++++. +++++.+++++ ..|++.+|++ .|.+.|+++|
T Consensus 168 ~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~~------~~v~vq~P~~-~G~i~d~~~i 229 (954)
T PRK12566 168 SNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHAV------FGALLQYPDT-HGEIRDLRPL 229 (954)
T ss_pred CCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCCE------EEEEEECCCC-ceEEccHHHH
Confidence 45688899999997776543 5666653 33444443333 4677888754 8999999999
Q ss_pred HHHHhhcCcEEEEecccc--cccccChhhhhhhCCCCCcceeeeccccc----cccCCcceeEEEecchhhhhhccCCcc
Q psy3048 106 GPICQEYNIWLHVDAAYA--GSALLLPEYAHLKRGLEYVDSFAFNAHKW----LLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~--~~~~~~~~~~~~~~~~~~~D~~~~~~hK~----l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
.+++|+.|++++ +++-- .+.+- ++.. . .+|+++.+++.+ .+++++.|++.+++. +.+.+ ...
T Consensus 230 ~~~~h~~gal~~-~~~d~laL~ll~-~Pge---~---GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~--~~R~~--PGR 297 (954)
T PRK12566 230 IDQLHGQQALAC-VAADLLSLLVLT-PPGE---L---GADVVLGSTQRFGVPMGYGGPHAAYFACRDD--YKRAM--PGR 297 (954)
T ss_pred HHHHHHcCCEEE-EEeCHHHHhCCC-Chhh---c---CCcEEeeCCCcCCCCCCCCCCCeeeeeehHH--HHhhC--CCC
Confidence 999999999855 54432 22221 1111 1 359997766543 333456777777543 32221 111
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccc---ccccccccc-ccHHHHHHHHHHhhHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQ---HWQTPLSRR-FRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
.++..... .....|.+. +. .-.|+|+ .-...|++. ..++....++-.+|.+|++++.
T Consensus 298 ivG~s~D~--~G~~a~~l~-------------Lq----tREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia 358 (954)
T PRK12566 298 IIGVSRDA--RGNTALRMA-------------LQ----TREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIA 358 (954)
T ss_pred ccceeecC--CCCeeeehh-------------hh----HHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 11111100 111122000 00 0000110 011112221 1122223344567999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
++...++.|+.+.|.+ .|+++..++.+..+.+++.. ...++.++-.++|.-. -. . +...+.+|+ .-.++.+
T Consensus 359 ~~~~~~a~~l~~~l~~-~g~~~~~~~fF~~~~v~~~~---~~~~~~~~a~~~~~n~-r~--~-~~~~~~~s~-de~~~~~ 429 (954)
T PRK12566 359 QRVHRLTAILAAGLEA-KGIKRLNRHFFDTLTLEVGG---AQAAIIESAEAARINL-RI--L-GRGRLGVSL-DETCDEA 429 (954)
T ss_pred HHHHHHHHHHHHHHHh-cCCccccCCccceEEEEccC---CHHHHHHHHHHCCCee-EE--e-CCCeEEEEe-CCCCCHH
Confidence 9999999999999999 69998877778888887731 2557777777777432 11 1 234677866 5677899
Q ss_pred HHHHHHHHHH
Q psy3048 336 DVAFAWNEIS 345 (367)
Q Consensus 336 did~li~~l~ 345 (367)
|++.+++.+.
T Consensus 430 ~~~~~~~~f~ 439 (954)
T PRK12566 430 TVARLFDIFL 439 (954)
T ss_pred HHHHHHHHhc
Confidence 9999999984
No 309
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.27 E-value=4.4e-10 Score=109.62 Aligned_cols=263 Identities=17% Similarity=0.137 Sum_probs=166.4
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecC--C----CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--D----NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~----~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
+.-.|++++++|.|...+..+.|+.++++.+. + -+.++.+.+++++.+..... ++++++.+ |+.|++.++
T Consensus 109 ~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~ 184 (557)
T COG1982 109 PGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNL 184 (557)
T ss_pred CCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecH
Confidence 45567889999999999999999999998763 2 27899999999987665311 35666654 889999999
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhh-hhccCCccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT-NTFFTDRVY 180 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~~~~~y 180 (367)
++|.+.++.+++|+.+|.+|+...-..+.... ... ..+|+.+-|.||.+.+-..++.+.+++...+. +.+ +..|
T Consensus 185 ~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~--~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~--nea~ 260 (557)
T COG1982 185 RKIVELLHHYGAWVLYDEAHPAHFDFSPMLPE--SALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERF--NEAL 260 (557)
T ss_pred HHHHHHHhhcCceEEhhhcCcccccccccCcc--hhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHH--HHHH
Confidence 99999999999999999999886655443322 111 23599999999999999999999998631111 111 0111
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh---hHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY---GLKGLQAYLRK 257 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~g~~~~~~~ 257 (367)
.... +++++|-++ .++-.+-... |..-+++-+++
T Consensus 261 ~~h~-----STSPsY~l~--------------------------------------ASlD~Ar~~~~~~G~~l~~~~~~~ 297 (557)
T COG1982 261 MMHQ-----STSPSYPLM--------------------------------------ASLDVARMQEGNAGRELWQEVIDE 297 (557)
T ss_pred HHHc-----cCCchHHHH--------------------------------------HHHHHHHHhhhhhhHHHHHHHHHH
Confidence 1111 234444111 1111111122 33334444777
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCC---------------------ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPS---------------------MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS 316 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~---------------------~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 316 (367)
..+.++++++...++++|+++.++. -.-+++..+........+.+.|.++|++..-.+.
T Consensus 298 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~d 377 (557)
T COG1982 298 AIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETGD 377 (557)
T ss_pred HHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecCC
Confidence 8888999999999988888887542 1222333322223345777778888865332221
Q ss_pred ECCeeEEEEEecCCCCCHHHHHHHHHHHH
Q psy3048 317 FQGRPFLRFVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 317 ~~~~~~lRi~~~~~~~~~edid~li~~l~ 345 (367)
.. ..+=+++ .......+++.+++.++
T Consensus 378 ~~--~lll~~~-~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 378 YS--NLLLFSP-GIGKWQTLVDRLLEFKR 403 (557)
T ss_pred ce--eeEEeee-ccchHHHHHHHHHHHHH
Confidence 11 1222222 11345677777777766
No 310
>PRK06541 hypothetical protein; Provisional
Probab=99.27 E-value=4.8e-09 Score=103.25 Aligned_cols=229 Identities=15% Similarity=0.123 Sum_probs=128.1
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
+.+++.++.. +.....+|++.-..++.|.+.| +++|.++|++||+++++|++|.++......+.....++ ..|
T Consensus 208 ~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PD 284 (460)
T PRK06541 208 DRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPD 284 (460)
T ss_pred HHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCC
Confidence 5666666532 1122345555555677788888 99999999999999999999955433222211111233 358
Q ss_pred eeeeccccccccCC-cceeEEEecchhhhhhccCC-ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 144 SFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTD-RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 144 ~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
+++ .-|.+.+.+ ..|.++.+++. .. .+... ..+....
T Consensus 285 ivt--~gK~l~~G~~pigav~~~~~i-~~-~~~~~~~~~~~~~------------------------------------- 323 (460)
T PRK06541 285 IIT--CAKGITSGYSPLGAMIASDRL-FE-PFLDGPTMFLHGY------------------------------------- 323 (460)
T ss_pred EEE--ecccccCCccceeEEEEcHHH-HH-HhhcCCCccccCC-------------------------------------
Confidence 775 578887654 47777775432 21 11111 0111000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC--CCceeEEEEEcCC------
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP--PSMGLVCFRLKGD------ 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~------ 293 (367)
+. .+....+....+.++.+..+ +..++..++.++|.+.|+++....++.. ..-.+..+.+..+
T Consensus 324 -----T~-~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~ 394 (460)
T PRK06541 324 -----TF-GGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKET 394 (460)
T ss_pred -----CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccC
Confidence 00 01111223333444444333 3456788888999888877632222111 1112223333210
Q ss_pred --ch-----HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 --ND-----LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 --~~-----~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.. ....+.+.+.++|. ++.+. ..+...+|+++ ....+++|||.++++|++.++++-
T Consensus 395 ~~~~~~~~~~~~~~~~~l~~~Gi-~~~~~-~~g~~~lrl~P-pl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 395 FTDDESERLLRGFLSPALFEAGL-YCRAD-DRGDPVVQLAP-PLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CcchhhhhhHHHHHHHHHHhCCe-EEEec-CCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 11356778888884 44432 23446899965 466789999999999999988654
No 311
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.27 E-value=7.3e-09 Score=101.22 Aligned_cols=226 Identities=14% Similarity=0.114 Sum_probs=131.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|.+++++.+++...++.....|++.-....-|.+.| +++|.++|++||+.+++|++|.++.....-+.....++ .
T Consensus 207 d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~ 285 (442)
T TIGR03372 207 DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-Q 285 (442)
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-C
Confidence 678888888654333334556666666666788888 99999999999999999999966432221111112244 4
Q ss_pred cceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++ .-|.+++. ..+|.++.++ +.. ..+. ..++....
T Consensus 286 PDivt--~gK~lg~G~~Pigavv~~~-~i~-~~~~-~~~~~~~~------------------------------------ 324 (442)
T TIGR03372 286 PDILC--LAKALGGGVMPIGATIATE-AVF-SVLF-DNPFLHTT------------------------------------ 324 (442)
T ss_pred CCeee--ehhhhcCCcccceEEEecH-HHH-Hhhh-ccCccccC------------------------------------
Confidence 58776 47888764 2467777643 222 2111 01111000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeE-EeCC-C-CceeEEEEEcCCchH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFE-LVCP-P-SMGLVCFRLKGDNDL 296 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~-~~~~-~-~~~~v~f~~~~~~~~ 296 (367)
+-.+....+.+..+.|+.+..++ +.++..++.++++++|+++. .+. .+.. . ...++.+.+.. +..
T Consensus 325 -------T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~-~~~ 393 (442)
T TIGR03372 325 -------TFGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRD-NEI 393 (442)
T ss_pred -------CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCC-hHH
Confidence 00111122344445565554433 44566777888887776541 111 1111 1 22344455543 334
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...+.+.+.++|.+ +.+.. .+...+|+.+ ....|++|+|+++++|++.
T Consensus 394 ~~~i~~~l~~~Gvl-~~~~~-~~~~~lr~~P-pl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 394 GYAFAKELFQQNIL-VAGTL-NNAKSIRIEP-PLTITIEQCALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHCCcE-EeecC-CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 56788889999854 43221 1235899965 5667899999999999875
No 312
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=4.6e-09 Score=102.99 Aligned_cols=229 Identities=11% Similarity=0.096 Sum_probs=129.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++++|++.++.... .....+|++.-.....|.+.| +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 191 ~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~ 268 (433)
T PRK08117 191 CLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-V 268 (433)
T ss_pred HHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-C
Confidence 56667777754211 122456666666667788888 99999999999999999999986433221111111123 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+ .+.-|.+++...+|+++.++ +... .+. .. .. .
T Consensus 269 pDi--~t~sK~lg~G~pigav~~~~-~i~~-~~~--~~-----~~---~------------------------------- 303 (433)
T PRK08117 269 PDI--MTIAKGIASGLPLSAVVASK-ELME-QWP--LG-----SH---G------------------------------- 303 (433)
T ss_pred CCE--eehhhhccCCCcceeEEEcH-HHHh-hcc--CC-----CC---C-------------------------------
Confidence 465 45688888655577777643 2222 110 00 00 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeC-CCCce-eEEEEEcC-----C
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVC-PPSMG-LVCFRLKG-----D 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~-~~~~~-~v~f~~~~-----~ 293 (367)
.+. .++.+.+.+..++|+.+..+ ++.++..++.++++++|+++. ...++. .+..+ ++.+.+.. .
T Consensus 304 ----~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~ 375 (433)
T PRK08117 304 ----TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPD 375 (433)
T ss_pred ----CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcc
Confidence 000 01112233444455544332 455667777888888776642 111111 12222 22333321 1
Q ss_pred chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.++.. .. ....++|+++ ....+++||++++++|+++++++.
T Consensus 376 ~~~~~~~~~~l~~~Gv~~~~-~g-~~~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 376 GDAVEKILDKCLEKGLLFYL-CG-NAGNVLRMIP-PLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred hHHHHHHHHHHHHCCCEEee-cC-CCCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 23345778888889965432 11 1246899965 456689999999999999988764
No 313
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.25 E-value=4.3e-09 Score=104.51 Aligned_cols=286 Identities=10% Similarity=0.022 Sum_probs=155.0
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCC-----
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGV----- 64 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~----- 64 (367)
.||++||.+.... +. + ..+.+|......|-+...++...|.. +..++.+..++
T Consensus 166 ~AlKlAr~~~~~~-g~--~-------~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 235 (504)
T PLN02760 166 TQVKLVWYYNNAL-GR--P-------NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPG 235 (504)
T ss_pred HHHHHHHHHHHhc-CC--C-------CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCC
Confidence 4788888775321 10 1 12445666777888876666554431 22233221111
Q ss_pred --------cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhh
Q psy3048 65 --------LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEY 132 (367)
Q Consensus 65 --------~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~ 132 (367)
...++|++.+.... ...+..|++.-.....|.+.| +++|.++|++||+++++|+++.++.....-+
T Consensus 236 ~~~~~~~~~~~~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~ 313 (504)
T PLN02760 236 ETEEEFSTRLADNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF 313 (504)
T ss_pred CcHHHHHHHHHHHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh
Confidence 11245676664321 123455666655566688888 9999999999999999999996654333222
Q ss_pred hhhhCCCCCcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchh
Q psy3048 133 AHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEF 211 (367)
Q Consensus 133 ~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (367)
.....++ ..|++++ -|.+++.+ .+|.++.++ +.. ..+...........
T Consensus 314 a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~-~i~-d~~~~~~~~~~~~~-------------------------- 362 (504)
T PLN02760 314 GCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSP-EIS-DVIHSQSNKLGSFA-------------------------- 362 (504)
T ss_pred HHHhcCC-CCcEEEe--cccccCCccccceEeecH-HHH-hhhhcccccccCcc--------------------------
Confidence 2222344 3687655 68877642 466666643 222 11110000000000
Q ss_pred ccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCc-eeEEEE
Q psy3048 212 LNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSM-GLVCFR 289 (367)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~-~~v~f~ 289 (367)
...+.. +....+.+..+.|+.+..+ ++.++..++.++|++.|+++....++.. ... .++.+.
T Consensus 363 ------------h~~T~~-gnPl~~Aaala~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie 426 (504)
T PLN02760 363 ------------HGFTYS-GHPVSCAVALEALKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTE 426 (504)
T ss_pred ------------cCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEE
Confidence 000111 1112233444455555433 4567788888898888876532222211 111 233333
Q ss_pred EcCC----------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 290 LKGD----------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 290 ~~~~----------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+... ......+.+.+.++|.+ +.+ .+ ..+|+++ ....+++|||+++++++++++++.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl-~~~---~g-~~lrl~P-pl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 427 FVDNKSPNDPFPAEWGVGAYFGAECKKRGML-VRV---AG-DNIMMSP-PLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EecCCcccccccchhHHHHHHHHHHHhCCcE-EEe---cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3221 01245677888889954 322 23 4689965 456789999999999999888764
No 314
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.23 E-value=5.9e-09 Score=100.31 Aligned_cols=227 Identities=13% Similarity=0.077 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
.+.+++.+.+.......+..+++--....-|.+.| ++++.++|++||+++++|+.|.++.....-+.+...++ ..
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~P 284 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EP 284 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CC
Confidence 34456656555555566778888877777787743 68999999999999999999988765443333333444 56
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|+++++ |.+++..-.|.++.+.+ +.... .+.
T Consensus 285 Divt~a--K~ig~G~Pl~avv~r~e--i~~~~--------~g~------------------------------------- 315 (447)
T COG0160 285 DIVTLA--KSLGGGLPLSAVVGRAE--IMDWP--------PGG------------------------------------- 315 (447)
T ss_pred CEEEec--ccccCCCceeEEeccHH--hcccC--------Ccc-------------------------------------
Confidence 887764 77776666777777543 11000 000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCCC-Cce-eEEEEEc-------C
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCPP-SMG-LVCFRLK-------G 292 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~~-~~~-~v~f~~~-------~ 292 (367)
..++ -.++...+.+..+.|+.+..+ ++.++..++.+|++++|.++. .+.++.+. ..+ ++.+.+. +
T Consensus 316 -~~~T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p 390 (447)
T COG0160 316 -HGGT-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP 390 (447)
T ss_pred -cCCC-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCC
Confidence 0001 122223344555556655554 566788899999999987652 34455542 222 2222222 1
Q ss_pred CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 293 DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 293 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.......+++++.++|.+....+. ..+++||.+ ..-.+++++|.+++.|++.++++
T Consensus 391 ~~~~~~~i~~~~~~~Glil~~~G~--~~nviRi~P-PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 391 DAELAAKIVARAFERGLLLLTCGP--HGNVLRILP-PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CHHHHHHHHHHHHHcCCEEeccCC--CCcEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 125567889999999965443221 246999955 56678999999999999998764
No 315
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=2.3e-08 Score=98.05 Aligned_cols=228 Identities=13% Similarity=0.041 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++.+++.++... .+.....|++.-..+++|.+-| +++|.++|++||+++++|++|+++......+.....++ ..
T Consensus 189 ~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~p 266 (443)
T PRK08360 189 VEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EP 266 (443)
T ss_pred HHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CC
Confidence 345566664321 1123456666655577887754 89999999999999999999986543222111111233 34
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++++ .|.++....+|+++.+. +... .+.. ... .
T Consensus 267 Diitl--sK~l~~G~pigav~~~~-~i~~-~~~~-------~~~-----~------------------------------ 300 (443)
T PRK08360 267 DIITL--GKPLGGGLPISATIGRA-EIMD-SLPP-------LAH-----A------------------------------ 300 (443)
T ss_pred CEEEe--cccccCCceeEEEEEcH-HHHh-hhcC-------CCC-----C------------------------------
Confidence 76655 89888655678877743 2222 1110 000 0
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD------ 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~------ 293 (367)
++. .+....+....++++.+..+ ++.++..++.+++++.|+++. ...++.. ... .++.+.+..+
T Consensus 301 ---~T~-~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~ 373 (443)
T PRK08360 301 ---FTL-SGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER 373 (443)
T ss_pred ---CCC-CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc
Confidence 000 01112233444555554433 345677777788877776531 1111111 112 2333333211
Q ss_pred -chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 294 -NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 294 -~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
......+.+++.++|.+ +.+. +...+|+++ ....+++|||.+++++++.++++.+.
T Consensus 374 ~~~~~~~~~~~l~~~Gi~-~~~~---~~~~lr~~P-~l~~t~~~id~~~~~l~~~l~~~~~~ 430 (443)
T PRK08360 374 AYEEAAKVVWRAWELGLI-VTFF---SGNVLRIQP-PLTIEKEVLDEGLDILEEAIEDVEEG 430 (443)
T ss_pred cHHHHHHHHHHHHHCCeE-Eeec---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 12345788889999943 4321 236899965 56778999999999999999887543
No 316
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1.4e-08 Score=99.53 Aligned_cols=207 Identities=12% Similarity=0.101 Sum_probs=120.9
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
..+|++.-.....|.+.| +++|.++|++||+++++|+++.++.....-+.....++ ..|+++++ |.++++...
T Consensus 222 iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~ 298 (441)
T PRK05769 222 VAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPL 298 (441)
T ss_pred eEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCccc
Confidence 456666666666788888 99999999999999999999986432221111111233 35887754 877766667
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|+++.++.- . ... . ... . .+. .+......+.
T Consensus 299 gav~~~~~i-~-~~~---~-----~~~---~-----------------------------------~T~-~g~p~~~aaa 329 (441)
T PRK05769 299 GAVIGRAEL-M-FLP---P-----GSH---A-----------------------------------NTF-GGNPVAAAAA 329 (441)
T ss_pred EEEEEehhh-h-hcC---C-----CCC---C-----------------------------------CCC-CcCHHHHHHH
Confidence 777765431 1 110 0 000 0 000 0111222344
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC-----chHHHHHHHHHhccCcEE
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD-----NDLTNQLYERLMSHKQIY 311 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~-----~~~~~~l~~~L~~~g~~~ 311 (367)
.++|+.+.. +..++..++.++|++.|+++. .+.++.. ... .++.+.+... ......+.+.+.++|.+
T Consensus 330 ~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil- 404 (441)
T PRK05769 330 LATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLL- 404 (441)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcE-
Confidence 445555433 556677888888888886642 1222211 122 2333444221 12345777888889954
Q ss_pred EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 312 IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 312 ~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.+ .+...+|+++ ....+++|||++++++++++.++
T Consensus 405 ~~~---~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 405 LLG---AGKSAIRIIP-PLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred Eec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 322 2446899965 45678999999999999988753
No 317
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.16 E-value=2.1e-08 Score=98.47 Aligned_cols=209 Identities=10% Similarity=0.020 Sum_probs=117.7
Q ss_pred EEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 85 CCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
..|++.-.....|.+.| +++|.++|++||+++++|+.+.++......+.....++ ..|.++++ |.+++..-+|
T Consensus 221 Aavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~ 297 (443)
T PRK06058 221 AAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLS 297 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccE
Confidence 44544433333455543 99999999999999999999976543322221222234 45888884 8888666688
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++.+++ .. +.+. ...... + -.+....+.+..
T Consensus 298 av~~~~~-i~-~~~~--~~~~~~-------------------------------------------T-~~gnpl~~aaa~ 329 (443)
T PRK06058 298 AVTGRAE-IM-DAPH--PGGLGG-------------------------------------------T-YGGNPVACAAAL 329 (443)
T ss_pred EEEEcHH-HH-hhcc--CCCCCC-------------------------------------------C-CCCCHHHHHHHH
Confidence 8887543 22 1111 000000 0 011112223444
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC--CCceeEEEEEcCC------chHHHHHHHHHhccCcEE
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP--PSMGLVCFRLKGD------NDLTNQLYERLMSHKQIY 311 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~--~~~~~v~f~~~~~------~~~~~~l~~~L~~~g~~~ 311 (367)
+.|+.+..+ ++.++..++.+++.++|+++. ...++.. ..-.++.+.+... ......+.+.+.++|.+
T Consensus 330 a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~- 405 (443)
T PRK06058 330 AAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVI- 405 (443)
T ss_pred HHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeE-
Confidence 445444333 455677777888888886642 1222211 1222333333211 12345677788888854
Q ss_pred EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 312 IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 312 ~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+.+.... ..++|+.+ ....+++|||.++++|++++++
T Consensus 406 ~~~~~~~-~~~lr~~P-pl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 406 VLTCGTY-GNVIRLLP-PLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EeccCCC-CCEEEEEC-CCccCHHHHHHHHHHHHHHHHh
Confidence 4332111 25899965 4567899999999999998765
No 318
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.14 E-value=4.6e-08 Score=95.98 Aligned_cols=230 Identities=15% Similarity=0.156 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
.++|++.++... .....+|++.-.....|.+.| +++|.++|++||+++++|++|.++.....-+.....++ ..
T Consensus 204 ~~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~P 280 (445)
T PRK09221 204 ADDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TP 280 (445)
T ss_pred HHHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CC
Confidence 356777775321 122456667766677788888 99999999999999999999976433222111111233 35
Q ss_pred ceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|++++ -|.+.+. .-.|.++.++ +... .+...+.+.. .+ .
T Consensus 281 Di~~~--gK~l~gG~~Pi~av~~~~-~i~~-~~~~~~~~~~-----------~~--------------------~----- 320 (445)
T PRK09221 281 DIITF--AKGLTNGAIPMGAVIASD-EIYD-AFMQGPEYAI-----------EF--------------------F----- 320 (445)
T ss_pred CEEEe--ccccccCcccceeeEEcH-HHHH-hhccCccccc-----------cc--------------------c-----
Confidence 76655 5666543 2256666643 2222 1111111000 00 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCcee-EEEEEcC----Cch
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGL-VCFRLKG----DND 295 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~-v~f~~~~----~~~ 295 (367)
..++.. +.........+.|+.+..+ ++.++..++.+++++.|+++.+...+.+ ...+. ..+.+.. ...
T Consensus 321 --~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~ 394 (445)
T PRK09221 321 --HGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGA 394 (445)
T ss_pred --cccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccc
Confidence 000111 1112223334555555443 3567888999999998877633222111 12222 2233321 112
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
...++.+++.++|. ++.. .+ ..+|+++ ....|++|||++++.|++.++++
T Consensus 395 ~~~~~~~~~~~~Gv-~~~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 395 RGYEAFMKCFEKGL-LVRY---TG-DTIALSP-PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred hHHHHHHHHHHCCe-EEee---cC-CEEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 24578888998984 3432 22 4799965 56778999999999999998764
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.14 E-value=2.6e-08 Score=97.84 Aligned_cols=213 Identities=8% Similarity=0.041 Sum_probs=121.1
Q ss_pred cEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
...|++.-.....|.+ +-+++|.++|++||+++++|+.+.++......+.....++ ..|++++ -|.++....+
T Consensus 207 iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pi 283 (442)
T TIGR00709 207 PAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPL 283 (442)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCccc
Confidence 3455555555555655 3579999999999999999999887644332222211234 4588884 6887776678
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|+++.+++ +. .+. .... . .+-.+..+.+.+.
T Consensus 284 gav~~~~~--~~-~~~--~~~~--~------------------------------------------~T~~gnpla~aaa 314 (442)
T TIGR00709 284 AVLLIAPE--FD-AWQ--PAGH--T------------------------------------------GTFRGNQLAMVTG 314 (442)
T ss_pred EEEEEchH--Hh-ccC--CCcC--C------------------------------------------CCCCcCHHHHHHH
Confidence 88887543 22 110 0000 0 0001111223344
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC-------------chHHHHHHHH
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD-------------NDLTNQLYER 303 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~-------------~~~~~~l~~~ 303 (367)
.+.|+.+..+ ++.++..++.+++.++|+++. ...++.. ... .++.+.+... ......+...
T Consensus 315 ~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (442)
T TIGR00709 315 TEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGA 391 (442)
T ss_pred HHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHH
Confidence 4555554443 344567777788877776531 2222221 111 2223333211 1134567778
Q ss_pred HhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 304 LMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 304 L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
+.++|. ++.+... ....+|+.+ ....|++|++.+++++++.++++.++
T Consensus 392 ~~~~Gv-l~~~~~~-~~~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 392 CFENGL-LLETGGR-EGEVFRLLC-PITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred HHHCCe-EEeecCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 888884 3433221 235899955 56778999999999999998876443
No 320
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.14 E-value=5e-08 Score=95.79 Aligned_cols=211 Identities=16% Similarity=0.148 Sum_probs=119.9
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
..+|++.-.....|.+.| +++|.++|++||+++++|+++.++......+.....++ ..|++++ -|.+.+...+
T Consensus 208 iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~ 284 (445)
T PRK08593 208 VACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPM 284 (445)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCccc
Confidence 456666666666677767 99999999999999999999865433221111111233 3576654 6777755557
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|+++.++ +..+ .+. ...+. ++. .++...+.+.
T Consensus 285 gav~~~~-~i~~-~~~-~~~~~--------------------------------------------~T~-~~~pl~~aaa 316 (445)
T PRK08593 285 SAIVGRK-EIME-SLE-APAHL--------------------------------------------FTT-GANPVSCAAA 316 (445)
T ss_pred EEEEEcH-HHHh-hhc-cCCCC--------------------------------------------CCC-CCCHHHHHHH
Confidence 7777753 2222 111 00000 000 0111223344
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCce-eEEEEEcC-------CchHHHHHHHHHhccCc
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSMG-LVCFRLKG-------DNDLTNQLYERLMSHKQ 309 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~~-~v~f~~~~-------~~~~~~~l~~~L~~~g~ 309 (367)
.+.++.+..+ ++.++..++.+++++.|+++. ...++.. ...+ ++.+.+.. .......+...+.++|.
T Consensus 317 ~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 317 LATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCe
Confidence 4555555433 455677777788877776531 1111111 1111 11222211 12234578888889995
Q ss_pred EEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 310 IYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 310 ~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+ +.+. +...+|+++ ....|++|||+++++++++++++..
T Consensus 394 ~-~~~~---~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 394 V-IIAV---AGNVLRFQP-PLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred E-Eecc---CCCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 4 4321 235899965 5677899999999999999988754
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.13 E-value=1.6e-08 Score=98.81 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=125.2
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+++.. ....+|++....+..|.+.| +++|.++|++||+++++|++|.++ ...........++ .
T Consensus 183 d~~~l~~~i~~~~---~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~ 257 (426)
T PRK00062 183 DLEAVEELFEEYG---DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-T 257 (426)
T ss_pred CHHHHHHHHHhCC---CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-C
Confidence 7899999886422 12356666656677898888 999999999999999999999765 2221111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++ ..|.+++.+..|+++.+ ++... .+.. ...+..
T Consensus 258 pDi~~--~gK~l~~G~p~ga~~~~-~~i~~-~~~~~~~~~~~-------------------------------------- 295 (426)
T PRK00062 258 PDLTT--LGKIIGGGLPVGAFGGR-REIME-QLAPLGPVYQA-------------------------------------- 295 (426)
T ss_pred cchHh--hhhHhhCCCcceeeeEH-HHHHH-hhccCCCceec--------------------------------------
Confidence 36543 46888765556776553 33222 1110 011110
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCC----
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~---- 293 (367)
++-.+....+.+..++|+.+..+ +..++..++.+++++.|+++ -++..-......++.+.+...
T Consensus 296 ------~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~ 366 (426)
T PRK00062 296 ------GTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTN 366 (426)
T ss_pred ------ccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcc
Confidence 00111112234444555554333 45566777777777777532 033221111223333333211
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
......+.+.+.++|. ++.+. +...++++ ...+++||+++++.|+++++++
T Consensus 367 ~~~~~~~~~~~~~~i~~~l~~~Gv-~v~~~---~~~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 367 YADAKKSDTERFARFFHAMLDEGV-YLAPS---QFEAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred hhhhccccHHHHHHHHHHHHHCCe-EeecC---CcCceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 1234578888999984 44432 22345553 4558999999999999988754
No 322
>PRK07678 aminotransferase; Validated
Probab=99.12 E-value=9.1e-08 Score=94.12 Aligned_cols=230 Identities=15% Similarity=0.120 Sum_probs=124.4
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCccee
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSF 145 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 145 (367)
+++.++.. +......|++.-.....|.+.| ++++.++|++||+++++|+.+.++......+.....++ ..|++
T Consensus 202 l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDiv 278 (451)
T PRK07678 202 IDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDII 278 (451)
T ss_pred HHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEE
Confidence 55556422 1223445555544445566654 89999999999999999999976544322111111344 46888
Q ss_pred eeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccc
Q psy3048 146 AFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQ 224 (367)
Q Consensus 146 ~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (367)
++ -|.+++. .-+|.++.+++ .. ..+.....+ . .+ .
T Consensus 279 t~--gK~lggG~~Pi~av~~~~~-i~-~~~~~~~~~---~---------~~----------------------------~ 314 (451)
T PRK07678 279 TM--AKGITSAYLPLSATAVKKE-IY-EAFKGKGEY---E---------HF----------------------------R 314 (451)
T ss_pred Ee--ecccccCCcceeEEEEcHH-HH-HHHhccCcc---c---------cc----------------------------c
Confidence 77 6877765 35777777543 22 212110000 0 00 0
Q ss_pred cccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEeC-CCCc-eeEEEEEcC--------C
Q psy3048 225 HWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-DRFELVC-PPSM-GLVCFRLKG--------D 293 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~g~~~~~-~~~~-~~v~f~~~~--------~ 293 (367)
...+-.++...+.+..+.|+.+..+ ++.++..++.++|.+.|+++ ....++. .... .++.+.+.. .
T Consensus 315 h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~ 391 (451)
T PRK07678 315 HVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPAD 391 (451)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCc
Confidence 0000111212234444555555444 34556777777777776432 1111111 1111 222333321 1
Q ss_pred chHHHHHHHHHhccCcEEEEEeE---ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKAS---FQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
......+.+.+.++|.+ +.+.. ..+...+|+++ ....|++|||+++++++++++++
T Consensus 392 ~~~a~~i~~~l~~~Gv~-~~~~g~~v~~~~~~lrl~P-pl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 392 NDKVASVVAACKEKGLI-IGKNGDTVAGYNNVLTLSP-PLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred hHHHHHHHHHHHHCCcE-EeecCccccCCCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhc
Confidence 23346788889999954 43321 12346899965 45668999999999999998764
No 323
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.12 E-value=2.3e-08 Score=97.84 Aligned_cols=225 Identities=11% Similarity=0.045 Sum_probs=118.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|+++++... ..+.+|++....+.+|.+.| +++|.++|++||+++++|++|.++.. ...+.....++ .
T Consensus 181 d~~~l~~~i~~~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~~~~~~~~-~ 255 (423)
T TIGR00713 181 DLEALEEVFEEYG---EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGGAQEYFGV-E 255 (423)
T ss_pred CHHHHHHHHHHcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-CcchhHHHhCC-C
Confidence 8999999987421 12345555433344788866 79999999999999999999976522 11111111223 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++ +..|.+.+....|+++.++ +... .+.....+. .
T Consensus 256 pDi~--t~sK~l~~G~pig~v~~~~-~i~~-~~~~~~~~~-~-------------------------------------- 292 (423)
T TIGR00713 256 PDLT--TLGKIIGGGLPVGAFGGRR-EIME-RLAPEGPVY-Q-------------------------------------- 292 (423)
T ss_pred cchh--hhhhhhcCCCceeeeeEHH-HHHH-hhCcCCCee-e--------------------------------------
Confidence 4654 4688888655578877743 2222 111000000 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-------
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD------- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~------- 293 (367)
.++-.+..+.+.+..++|+.+..++ ++...+....+.+.+.+.+++. ++..-......++.+.+...
T Consensus 293 ----~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~~ 367 (423)
T TIGR00713 293 ----AGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYAD 367 (423)
T ss_pred ----ccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChhh
Confidence 0000111122344445555543332 3333333334444444445554 33221111122333322210
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
......+.+.|.++|. ++.+. +...+|+++. .+++|++.+++.|++++++
T Consensus 368 ~~~~~~~~~~~~~~~l~~~Gv-~v~~~---~~~~~~l~~~---~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 368 AKKSDTELFAKFFHEMLDKGV-FLPPS---QFEACFLSAA---HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred hhcccHHHHHHHHHHHHHCCe-EEecC---CccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence 1123467788888884 44332 2235787542 4799999999999998765
No 324
>PLN00144 acetylornithine transaminase
Probab=99.11 E-value=6.6e-08 Score=93.17 Aligned_cols=218 Identities=13% Similarity=0.091 Sum_probs=121.2
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc--CC--hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF--DN--LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i--~d--l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.++.. .+.+|++.-..++.|.. ++ +++|.++|++||+++++|++++++......+.....++ .
T Consensus 155 d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~ 228 (382)
T PLN00144 155 NLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-E 228 (382)
T ss_pred CHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC-C
Confidence 789999888431 13455555444553443 34 89999999999999999999987544332211112333 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.| ..+..|.+.....+|+++.+.. ... .+. . ... ..
T Consensus 229 PD--i~t~sK~l~~G~pig~v~~~~~-~~~-~~~--~-----~~~-----~~---------------------------- 264 (382)
T PLN00144 229 PD--IMTLAKPLAGGLPIGAVLVTEK-VAS-AIN--P-----GDH-----GS---------------------------- 264 (382)
T ss_pred CC--EEEecccccCCcceEEEEEcHH-HHh-ccC--C-----CCC-----CC----------------------------
Confidence 47 4445798887677888887432 221 110 0 000 00
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh----cCCCCe-EEeCCCCceeEEEEEcCCchH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV----EKDDRF-ELVCPPSMGLVCFRLKGDNDL 296 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L----~~~~g~-~~~~~~~~~~v~f~~~~~~~~ 296 (367)
+. .+....+....+.|+.+....+. ++..++.+++++.| .+.|.+ .+-. .-.++.+.+.. .
T Consensus 265 -----T~-~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg--~G~~~~l~l~~---~ 330 (382)
T PLN00144 265 -----TF-AGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG--VGLLVGIQLDV---P 330 (382)
T ss_pred -----CC-CCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec--CceEEEEEecC---c
Confidence 00 01112223444445655443333 34444445544444 344322 1111 22333444421 2
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
...+.+.+.++|.. +.+. .....+|+++ ....+++|++.+++.|++++.++
T Consensus 331 ~~~~~~~~~~~Gv~-i~~~--~~~~~lrl~p-~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 331 AGPLVDACRDSGLL-VLTA--GKGDVVRLVP-PLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred cHHHHHHHHHCCeE-Eeec--CCCCEEEEeC-CCccCHHHHHHHHHHHHHHHHhc
Confidence 45788888999954 4333 1136899965 34467999999999999988753
No 325
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.11 E-value=6.5e-09 Score=99.21 Aligned_cols=265 Identities=16% Similarity=0.133 Sum_probs=144.0
Q ss_pred CCcchhH-HHHHHhCCcceEEEec----------CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCC-ccccc---CC
Q psy3048 37 DQSNSSV-EKSAIIGDVPVRQLRS----------DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTT-GTCAF---DN 101 (367)
Q Consensus 37 ~~~H~s~-~~~~~~~g~~v~~v~~----------~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t-~~G~i---~d 101 (367)
...|+-. ...+.+.|+.++.++. +.+|.+|+++|+++|++.... ..+ .+..+..+| .-|++ +.
T Consensus 128 hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~-~i~-~v~~tlt~N~~GGqpvslen 205 (467)
T TIGR02617 128 SNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN-NVP-YIVATITCNSAGGQPVSLAN 205 (467)
T ss_pred eEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC-Cce-eeeeeEEEecCCCEEeCHHH
Confidence 3455553 3456678988877642 236999999999999864211 111 222222223 34555 56
Q ss_pred hhhHHHHHhhcCcEEEEecccccc-cccC--------h-hhhhhhCC-CCCcceeeeccccccccCCcceeEEEecc---
Q psy3048 102 LEELGPICQEYNIWLHVDAAYAGS-ALLL--------P-EYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNA--- 167 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~~~~-~~~~--------~-~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~--- 167 (367)
+++|.++|++||+++|+|||--+- ..+. + ..+..... .+.+|++++|+.|-+++|.|. ++..+++
T Consensus 206 lr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg-~Lag~d~~~~ 284 (467)
T TIGR02617 206 LKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGG-LLCFKDDSFF 284 (467)
T ss_pred HHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccc-eEEecchhHH
Confidence 788888999999999999975331 1110 0 01111100 256799999999999999663 4555555
Q ss_pred hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh
Q psy3048 168 NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG 247 (367)
Q Consensus 168 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 247 (367)
+.+.+....-..| .+ -+-| ..-.++...++ ...|...
T Consensus 285 ~l~~~~~~~~i~~--EG-------f~tY-------------------------------GGlagrd~ea~--a~Gl~e~- 321 (467)
T TIGR02617 285 DVYTECRTLCVVQ--EG-------FPTY-------------------------------GGLEGGAMERL--AVGLYDG- 321 (467)
T ss_pred HHHHHHHhhcccc--cC-------CcCc-------------------------------CchhHHHHHHH--Hhhhhhc-
Confidence 3343321111110 00 0011 00001111111 1222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEE----cC--CchH-HHHHHHHHhcc-CcEEEEEeEE--
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRL----KG--DNDL-TNQLYERLMSH-KQIYIIKASF-- 317 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~----~~--~~~~-~~~l~~~L~~~-g~~~~~~~~~-- 317 (367)
--++..++.....+||.++|.+. |+.+.. ..-+-+.+.. +. ..+. ...+.-.|..+ |+--+.-+..
T Consensus 322 --~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~ 397 (467)
T TIGR02617 322 --MNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLL 397 (467)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceec
Confidence 12445566778888999999885 887766 5444444421 11 0121 23555555443 3222211111
Q ss_pred -----------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 318 -----------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 318 -----------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..-..+|+++...--|.+++|.+++++..+.++-
T Consensus 398 ~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 398 GRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred ccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 1135899987555556899999999999987753
No 326
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.10 E-value=5.3e-08 Score=95.22 Aligned_cols=220 Identities=9% Similarity=0.007 Sum_probs=124.0
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|++.|++.+++.. .....|++.-.....|.+.| +++|.++|++||+++++|+.+.++ .....+.....++ .
T Consensus 186 d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~ 260 (428)
T PRK12389 186 DIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-E 260 (428)
T ss_pred CHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-C
Confidence 7899999886432 22456666656666788888 999999999999999999999876 2211111111234 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+++..-+|.++.++ +.. ..+.. .+.+...
T Consensus 261 PDivt~--gK~lggG~Pi~av~~~~-~i~-~~~~~~~~~~~~~------------------------------------- 299 (428)
T PRK12389 261 PDLTAL--GKIIGGGLPIGAYGGRK-DIM-EQVAPLGPAYQAG------------------------------------- 299 (428)
T ss_pred CCeeee--chhhcCCCceeEEeEHH-HHH-hhhccCCCccccc-------------------------------------
Confidence 587654 68877655577776643 222 21110 0000000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCC-eEEeCCCCceeEEEEEcCC--
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDR-FELVCPPSMGLVCFRLKGD-- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g-~~~~~~~~~~~v~f~~~~~-- 293 (367)
+ -.++...+.+..+.|+.+..+ ++.++..++.++|++.|++ ++- .++.... +++.+.+...
T Consensus 300 ------T-~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~--g~~gi~~~~~~~ 367 (428)
T PRK12389 300 ------T-MAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLK--GALTVYFTDEKV 367 (428)
T ss_pred ------C-CccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC--cEEEEEEeCCCC
Confidence 0 011112233444555555433 3556777888888888765 321 1221111 2222222110
Q ss_pred ----------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 294 ----------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 294 ----------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
......+.+.+.++|. ++.+. +...+.+ ....+++||+++++++++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~Gv-~~~~~---~~~~~~~---~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 368 TNYDQAERSDGEAFGKFFKLMLNQGI-NLAPS---KYEAWFL---TTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred CChhhhcccCHHHHHHHHHHHHHCCc-EeecC---CCCCeee---cCCCCHHHHHHHHHHHHHHHHh
Confidence 1224577888888985 44332 1112323 3455899999999999998764
No 327
>PRK06062 hypothetical protein; Provisional
Probab=99.09 E-value=2.5e-07 Score=90.95 Aligned_cols=224 Identities=11% Similarity=0.028 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
+++|++.++... ...+.+|++.-....-|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..
T Consensus 200 ~~~le~~l~~~~--~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~P 276 (451)
T PRK06062 200 LAHLERVIELEG--PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VP 276 (451)
T ss_pred HHHHHHHHHhcC--CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CC
Confidence 577788775321 122456666655566688888 99999999999999999999987533322212222344 46
Q ss_pred ceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|++++ -|.+++.+ -+|.++.++ +.. ..+.. ..+. ..
T Consensus 277 Di~t~--gK~lggG~~Pigav~~~~-~i~-~~~~~-~~~~-~~------------------------------------- 313 (451)
T PRK06062 277 DLITF--AKGVNSGYVPLGGVAISE-AIA-ATFAD-RPYP-GG------------------------------------- 313 (451)
T ss_pred Ceeee--chhhhcCCcCcEEEEEcH-HHH-HHhcc-CCCC-CC-------------------------------------
Confidence 87665 68887653 467777754 222 22210 0010 00
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHHHhcCC----CCe-EEeCCCCceeEEEEEcCC--
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA-KKFADLVEKD----DRF-ELVCPPSMGLVCFRLKGD-- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la-~~l~~~L~~~----~g~-~~~~~~~~~~v~f~~~~~-- 293 (367)
.+. .+....+....+.|+.+..+. ..++..++. +++.+.|+++ +-+ ++-... .++.+.+..+
T Consensus 314 ----~T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~G--l~~gve~~~~~~ 383 (451)
T PRK06062 314 ----LTY-SGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRGLG--VFWALELVADRE 383 (451)
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccc--cEEEEEEccccc
Confidence 000 011122334445555554443 444555555 4555555443 211 111111 1222222110
Q ss_pred -----------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 -----------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 -----------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+ . ...+|+++ ....+++|||.+++++++.++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~l~~~Gvl-~~~---~-~~~lrl~p-pl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 384 TREPLAPYGASSAAMAAVKAACKERGLL-PFV---N-GNRIHVVP-PCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred ccCCCcccchhhHHHHHHHHHHHHCCcE-Eee---c-CCEEEEEC-CccCCHHHHHHHHHHHHHHHHHhh
Confidence 01345788888999954 322 1 24799954 456789999999999999988764
No 328
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.09 E-value=8.2e-08 Score=94.65 Aligned_cols=229 Identities=11% Similarity=0.070 Sum_probs=127.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+.+.+++.+++..........|++.-....-|.+.| ++++.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~ 292 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-I 292 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-C
Confidence 367788888643211112345555544444455533 78999999999999999999877644332222222344 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ -|.+++..-+|.++.++. + ..+. +.+..+
T Consensus 293 PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~~~-------------------------------------- 327 (464)
T PRK06938 293 PDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAHAG-------------------------------------- 327 (464)
T ss_pred CCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCCCC--------------------------------------
Confidence 688888 577776666788777533 2 1111 110000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCce-eEEEEEcCC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSMG-LVCFRLKGD----- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~~-~v~f~~~~~----- 293 (367)
+. .+....+.+..+.|+.+..+ +..++..++.++|.++|+++. ...++.. ...+ ++.+.+...
T Consensus 328 -----T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~ 398 (464)
T PRK06938 328 -----TF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPD 398 (464)
T ss_pred -----CC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCccccc
Confidence 00 11112223344445554443 345567777778777776541 1222211 1222 223333210
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+.... ...+|+.+ ....|++|+|.+++++++.+.++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~Gll-~~~~g~~-~~~l~~~P-pl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 399 ALGHPPANGELASLIQRECLRRGLI-LELGGRH-GSVVRFLP-PLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred ccccCCccHHHHHHHHHHHHHCCeE-EeecCCC-CCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHh
Confidence 12345677788888853 4332111 35899954 466789999999999999988754
No 329
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.08 E-value=2.5e-07 Score=90.40 Aligned_cols=224 Identities=14% Similarity=0.061 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++.+++.+.... .......|++.-.....|.+-| +++|.++|++||+++++|+.+.++......+.....++ ..
T Consensus 182 ~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~p 259 (420)
T TIGR00700 182 LAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EP 259 (420)
T ss_pred HHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CC
Confidence 456666664221 1223455666655556677655 89999999999999999999987644322111111222 35
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|+++ ..|.+++...+|+++.+.. .. +.+. .... .
T Consensus 260 Di~~--lsK~l~~G~pig~v~~~~~-i~-~~~~--~~~~--~-------------------------------------- 293 (420)
T TIGR00700 260 DLIT--TAKSLADGLPLSGVTGRAE-IM-DAPA--PGGL--G-------------------------------------- 293 (420)
T ss_pred CEEE--eeccccCCcceEEEEecHH-HH-hhcC--CCCc--C--------------------------------------
Confidence 7655 6888887677888887432 22 1111 0000 0
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcC------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKG------ 292 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~------ 292 (367)
.+-.+..+.+....++++.+..+.+. ++..++.++++++|++ +|.+..+... -.+..+.+..
T Consensus 294 ----~T~~~~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~ 365 (420)
T TIGR00700 294 ----GTYAGNPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRIGDVRGL-GAMIAVELVDPGTTEP 365 (420)
T ss_pred ----CCCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCEEEeecc-ceEEEEEEecCCCCCc
Confidence 00011112223333445544444433 3444555555555543 4333322222 2333444321
Q ss_pred CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 293 DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 293 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.......+.+.+.++|.. +.+....+ .++|+++ ....++++++++++.|.+++.
T Consensus 366 ~~~~~~~l~~~~~~~Gv~-i~p~~~f~-~~lRl~p-~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 366 DAGLAERIATAAHAAGLL-LLTCGMFG-NIIRFLP-PLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred cHHHHHHHHHHHHHCCeE-EeccCCCC-CEEEEEC-CCCcCHHHHHHHHHHHHHHhh
Confidence 122345677777888854 44332222 5899965 233579999999999998763
No 330
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=9.7e-08 Score=93.26 Aligned_cols=226 Identities=11% Similarity=0.077 Sum_probs=127.0
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecC-CCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
+++.|++.++... .....|++.-. ....|.+ +=+++|.++|++||+++++|++|.++.....-+.....++
T Consensus 192 ~l~~l~~~i~~~~---~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv- 267 (429)
T PRK06173 192 AIEPLQDLLEQKG---DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV- 267 (429)
T ss_pred HHHHHHHHHHhCC---CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-
Confidence 4566777775321 22344444432 3434544 3478999999999999999999965322221111112234
Q ss_pred CcceeeeccccccccCC-cceeEEEecchhhhhhccCC--ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTD--RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~--~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
..|+++ .-|.+++.. -++.++.+++ ... .+... ..+....
T Consensus 268 ~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~~-~~~~~~~~~~~~~~--------------------------------- 310 (429)
T PRK06173 268 VPDIMC--IGKALTGGYLTLSATITTEA-IAQ-TICSGEAKCFMHGP--------------------------------- 310 (429)
T ss_pred CCCEEE--eehhhhCCccccceEEecHH-HHH-HHhcCCCCccccCC---------------------------------
Confidence 358777 478876542 3556665432 111 11100 0011000
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC--CCceeEEEEEcCCch
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP--PSMGLVCFRLKGDND 295 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~~~ 295 (367)
+. .+....+.+..++|+.+..+ +..++..++.++|++.|+++.++..+.. -...++.+.+.. ..
T Consensus 311 ---------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~-~~ 376 (429)
T PRK06173 311 ---------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKE-PV 376 (429)
T ss_pred ---------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCC-cc
Confidence 00 11122334455556655443 3456778888899888875433332221 123344555543 22
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
....+.+.|.++|. ++.+. + ..+|+.+ ....+++|+|.+++.|++++.++.
T Consensus 377 ~~~~i~~~l~e~Gi-~v~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 377 NMATLQPRFVEHGI-WVRPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred cHHHHHHHHHHCCe-EEEec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 34678889999984 44332 3 4899965 567789999999999999987654
No 331
>PRK06105 aminotransferase; Provisional
Probab=99.06 E-value=1.2e-07 Score=93.39 Aligned_cols=232 Identities=13% Similarity=0.087 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
.+++++.+.... ...+..|++.-....-|.+.| ++++.++|++||+++++|+.+.++.....-+.....++ ..
T Consensus 204 ~~~le~~~~~~~--~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~P 280 (460)
T PRK06105 204 ANELEALILAEG--PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KP 280 (460)
T ss_pred HHHHHHHHHHcC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CC
Confidence 456777765321 122445666555556677777 99999999999999999999966543322212222344 36
Q ss_pred ceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|++++ -|.+++.. ..|.++.+++ .. ..+......... +
T Consensus 281 Di~~~--gK~lggG~~P~~av~~~~~-i~-~~~~~~~~~~~~-----------~-------------------------- 319 (460)
T PRK06105 281 DILVM--SKQLSSSYQPLSAVLMNEK-VY-DPIADESGKIGT-----------F-------------------------- 319 (460)
T ss_pred Ceeee--ecccccCcccceEEEEcHH-HH-HHHhcccccCcc-----------c--------------------------
Confidence 87755 57776542 3666666432 22 211110000000 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCcee-EEEEEcCC------
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGL-VCFRLKGD------ 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~-v~f~~~~~------ 293 (367)
....+-.++...+....+.|+.+..+ +..++..++.++|.++|+++....++.. ...+. ..+.+...
T Consensus 320 --~h~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~ 394 (460)
T PRK06105 320 --GHGFTASGHPVAAAVALENLAIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTP 394 (460)
T ss_pred --ccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCC
Confidence 00000011112223344455555443 4566788888888888876532222211 12222 23333211
Q ss_pred ----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 ----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 ----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
......+...+.++|.+ +.+ .+ ..+|+++ ....+++|||.+++.|++.++++..
T Consensus 395 ~~~~~~~a~~i~~~~~~~Gvl-~~~---~g-~~i~l~P-pl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 395 FEPPGKVGARANAAAHEHGVI-SRA---MG-DTLAFCP-PLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CCchhHHHHHHHHHHHHCCeE-EEe---cC-CEEEEEC-CCccCHHHHHHHHHHHHHHHHHHHH
Confidence 11235678888888854 432 13 4899965 4557899999999999999987654
No 332
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.06 E-value=5.5e-08 Score=95.03 Aligned_cols=224 Identities=10% Similarity=0.059 Sum_probs=122.7
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccc-c----cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTC-A----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G-~----i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
|++++++.+.... ....+|++.-.....| . ..++++|.++|++||+++++|++|.++.....-+.....++
T Consensus 193 ~~~~l~~~l~~~~---~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v- 268 (427)
T TIGR00508 193 AITPLAKLMELHS---DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV- 268 (427)
T ss_pred HHHHHHHHHHhcC---CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-
Confidence 4667777776432 1223444443213333 2 37899999999999999999999955322221111111234
Q ss_pred CcceeeeccccccccCC-cceeEEEecchhhhhhccCC--ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTD--RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~--~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
..|++++ -|.+.+.. -++.++.++ +.. ..+... ..+.... .|
T Consensus 269 ~pDi~~~--gK~l~gG~~p~~a~~~~~-~~~-~~~~~~~~~~~~~~~---------T~---------------------- 313 (427)
T TIGR00508 269 VPDILCV--GKALTGGYMTLSATVTTD-KVA-QTISSGEAGCFMHGP---------TF---------------------- 313 (427)
T ss_pred CCCEEEe--chhhhcCcccceEEEEcH-HHH-HHHhcCCCCccccCC---------CC----------------------
Confidence 4587764 78886542 345555532 221 111110 0111000 00
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-C-CceeEEEEEcCCch
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-P-SMGLVCFRLKGDND 295 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~-~~~~v~f~~~~~~~ 295 (367)
.+..+......++++.+..+ +..++..++.++|++.|+++.....+.. . ...++.+.+.. ..
T Consensus 314 ------------~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~-~~ 377 (427)
T TIGR00508 314 ------------MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYK-PV 377 (427)
T ss_pred ------------CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECC-cc
Confidence 01112233444555554333 3456788888889888877632111111 1 12344454433 23
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
....+.++|.++|. ++.+. + ..+|+++ ....+++|||++++++++.+.+
T Consensus 378 ~~~~~~~~l~~~Gv-~~~~~---~-~~l~~~p-pl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 378 NVEELQKKFVEQGV-WIRPF---G-KLIYVMP-PYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CHHHHHHHHHHCCe-EEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHhc
Confidence 35678889999994 44332 2 3689865 4557899999999999998753
No 333
>KOG1358|consensus
Probab=99.05 E-value=1e-08 Score=94.47 Aligned_cols=264 Identities=12% Similarity=0.109 Sum_probs=164.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHh----hCCC---ccEEEEEecCCCcccccCChh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL----AKGL---IPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~----~~~~---~~~~vv~~~~~t~~G~i~dl~ 103 (367)
-+|+..+..+.++.++.+...-.++++.++ |+++|++.+.+.+ |..+ ....+++.....++|.+.|+.
T Consensus 179 DIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~ 253 (467)
T KOG1358|consen 179 DIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLP 253 (467)
T ss_pred cEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccH
Confidence 467778899999999999988899999876 8899988876544 1111 124677777788899999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccC-hh--hhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhh-hhccCCcc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLL-PE--YAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT-NTFFTDRV 179 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~-~~--~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~~~~~ 179 (367)
+|.++..+|...+++|++++.+.+.- .. -...-.+++..|.++++..-.+.. .|.+.+.+.-.+. +.+ ....
T Consensus 254 ~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas---~GgFc~G~~~i~~hQrL-Sg~~ 329 (467)
T KOG1358|consen 254 EIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS---GGGFCAGKSFIADHQRL-SGSG 329 (467)
T ss_pred HHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc---cCceeecceeeEeeeec-cccc
Confidence 99999999999999999987665421 00 001111245669888887666543 3333432211000 000 0122
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
|.++.. .+.+ .+-+...++..+.. -.++.+..+
T Consensus 330 Y~fSAs------lPp~---------------------------------------la~aa~~ai~i~~~--~p~~~~~L~ 362 (467)
T KOG1358|consen 330 YCFSAS------LPPY---------------------------------------LAGAAIKAILIEEW--NPEIVQPLR 362 (467)
T ss_pred eeeecc------Cchh---------------------------------------hhhhHHHHHHHHhh--Ccchhhhhh
Confidence 222211 1111 11122222322211 122455566
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-------hHHHHHHHHHhccCcEEEEEeEE------CCeeEEEEE
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN-------DLTNQLYERLMSHKQIYIIKASF------QGRPFLRFV 326 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-------~~~~~l~~~L~~~g~~~~~~~~~------~~~~~lRi~ 326 (367)
+.+..+-+.|+...++.+...+.++++..++.+.. ..-+++.++-+.++......... .-+..+||+
T Consensus 363 ~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~ 442 (467)
T KOG1358|consen 363 AKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC 442 (467)
T ss_pred ccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE
Confidence 77777778888888899988889999988886631 12346666666665332221111 125589996
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+ +...+++|++++.+.|++....+
T Consensus 443 ~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 443 V-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred E-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 6 56667999999999999986643
No 334
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.05 E-value=1.8e-07 Score=92.02 Aligned_cols=211 Identities=12% Similarity=0.027 Sum_probs=121.4
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
...|++.-.....|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|++++ -|.+.+..+.
T Consensus 223 iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi 299 (457)
T PRK05639 223 VAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGL 299 (457)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcc
Confidence 445555544444465533 78999999999999999999986433222112222344 4698884 7888876777
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|+++.+++ ... .. ...+.. +. .+....+.+.
T Consensus 300 ~av~~~~~-i~~-~~--~~~~~~--------------------------------------------T~-~g~p~~~aaa 330 (457)
T PRK05639 300 SGVIGRKE-LMD-LT--SGSALL--------------------------------------------TP-AANPVISAAA 330 (457)
T ss_pred eeEEehHH-HHh-hc--CCCccc--------------------------------------------CC-CcCHHHHHHH
Confidence 88777543 221 11 000100 00 0111122334
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEeCC-CCc-eeEEEEEcC-----CchHHHHHHHHHhccCcEE
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-DRFELVCP-PSM-GLVCFRLKG-----DNDLTNQLYERLMSHKQIY 311 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~g~~~~~~-~~~-~~v~f~~~~-----~~~~~~~l~~~L~~~g~~~ 311 (367)
.+.|+.+..+ +..++..++.++|++.|+++ .+..++.. ... .++.+.+.. .......+.+.+.++|.+
T Consensus 331 ~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~- 406 (457)
T PRK05639 331 EATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLI- 406 (457)
T ss_pred HHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeE-
Confidence 4455555443 44566777888888888763 12222221 111 122232211 123345788888889854
Q ss_pred EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 312 IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 312 ~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+.+. ..+...+|+++ ....|++|+|.++++|++.++++.
T Consensus 407 ~~~~-g~~~~~lr~~P-pl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 407 LPSY-GMFGNVIRITP-PLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred Eeec-CCCCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHH
Confidence 4332 11246899965 567789999999999999998764
No 335
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.05 E-value=1.3e-07 Score=93.28 Aligned_cols=227 Identities=13% Similarity=0.087 Sum_probs=126.3
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcce
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS 144 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 144 (367)
+.|++.++.. + ...+|++.-....-+.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|+
T Consensus 218 ~~l~~~i~~~---~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDi 292 (459)
T PRK06082 218 DYLEYVIEKE---G-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDI 292 (459)
T ss_pred HHHHHHHhcC---C-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCE
Confidence 4567666531 1 2344555444333223445 89999999999999999999987543322212122344 4688
Q ss_pred eeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcc
Q psy3048 145 FAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVI 223 (367)
Q Consensus 145 ~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (367)
++ .-|.+++.+ -+|.++.++. +...+. ..+. .
T Consensus 293 v~--~gKgl~gG~~P~~av~~~~~--i~~~~~--~~~~-~---------------------------------------- 325 (459)
T PRK06082 293 LC--IGKGLGGGLVPIAAMITKDK--YNTAAQ--ISLG-H---------------------------------------- 325 (459)
T ss_pred EE--ecccccCCCCcceEEEEcHH--HHhhcc--CCCC-C----------------------------------------
Confidence 87 478887653 4677777543 211110 0000 0
Q ss_pred ccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC-------
Q psy3048 224 QHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD------- 293 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~------- 293 (367)
++. .+....+.+..+.|+.+..+ +..++..++.++|.++|+++. ...++.. ... .++.+.+..+
T Consensus 326 --~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~ 399 (459)
T PRK06082 326 --YTH-EKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERA 399 (459)
T ss_pred --CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCcc
Confidence 000 11112223344455555433 356677888888888886642 1222211 111 2233333211
Q ss_pred chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCC
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGS 357 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~ 357 (367)
......+...+.++|.+ +.+ .+...+|+++ ....+++|||++++++++.+.++.++-.+
T Consensus 400 ~~~~~~~~~~~~~~Gvl-~~~---~~~~~i~~~P-pl~it~~eid~~~~~l~~~l~~~~~~~~~ 458 (459)
T PRK06082 400 YDEAEAVLYRCLNNGLS-FKV---SQGNVIQLSP-PLIITREELTQALAILEEAIAKICQDFNY 458 (459)
T ss_pred HHHHHHHHHHHHhCCCE-EEe---cCCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHhhhccC
Confidence 12245677778888854 332 2336899964 45578999999999999999887655443
No 336
>KOG0630|consensus
Probab=99.03 E-value=3.3e-09 Score=100.09 Aligned_cols=201 Identities=21% Similarity=0.287 Sum_probs=146.8
Q ss_pred CceEEEecCCcchhH-HHHHHhCCcceEEEec--C-----CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 29 SRLVAYASDQSNSSV-EKSAIIGDVPVRQLRS--D-----DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~-~~~~~~~g~~v~~v~~--~-----~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
..+++|+|+..|.-. +.+|+.+|+..+.|.+ + ..|+||...+++.++++...|+.|.+++...+.+..|..+
T Consensus 230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 468999999999884 5678888875544433 2 2469999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhhcC-cEEEEecccccccccChhhhhhhCC-CCCcceeeeccccccccCCcceeEEEecchhhhhhccCCc
Q psy3048 101 NLEELGPICQEYN-IWLHVDAAYAGSALLLPEYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 101 dl~~I~~l~~~~g-i~l~vD~a~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
-|-+|.++|++++ .|+|.-|- +...+.+.+-...+.+ .+..|+|+.+.--|++.|.- -++....+ ++
T Consensus 310 mi~kildi~eahakfWLHasGh-aiAALt~aepnnil~HV~eqldSMal~ialWLGiPSa-PiV~LHRP--le------- 378 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASGH-AIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSA-PIVLLHRP--LE------- 378 (838)
T ss_pred HHHHHHHHHHHhhheeEeeccc-hhhheeecCcccchhHHHHHHhhccchhHHHhCCCCC-ceEEeecc--cc-------
Confidence 9999999999987 99999872 2222322211111111 24469999999999998833 23333221 11
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
+|-.+. ..-.....++.+++++|.+++.++.+.+.++.+..
T Consensus 379 g~aaSa---------------------------------------fesdpi~rekLdaLp~Wta~q~LggKaIadmienA 419 (838)
T KOG0630|consen 379 GSAASA---------------------------------------FESDPILREKLDALPLWTALQALGGKAIADMIENA 419 (838)
T ss_pred cccchh---------------------------------------cccChHHHHhhccchHHHHHHHhcccHHHHHHHHH
Confidence 000000 00011224456779999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEeC
Q psy3048 259 ISLAKKFADLVEKDDRFELVC 279 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~ 279 (367)
..+++.+.+.+.++++++++.
T Consensus 420 Fll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 420 FLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred HHHHHHHHHHhhcCCceeEec
Confidence 999999999999999999885
No 337
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.03 E-value=7.3e-08 Score=94.51 Aligned_cols=230 Identities=16% Similarity=0.171 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
.++|+++++... .....+|++.-.....|.+.| +++|.++|++||+++++|++|.++.....-+.....++ ..
T Consensus 201 ~~~le~~l~~~~--~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~P 277 (442)
T PRK13360 201 ADELERLVTLHD--ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TP 277 (442)
T ss_pred HHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CC
Confidence 457777775321 123456666666667788888 99999999999999999999965433221111112234 35
Q ss_pred ceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|++++ -|.+.+. .-+|.++.+++ .. +.+...+.. ...+ .
T Consensus 278 Divt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~-----------~~~~--------------------~----- 317 (442)
T PRK13360 278 DLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEA-----------GIEF--------------------F----- 317 (442)
T ss_pred ceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCcc-----------cccc--------------------c-----
Confidence 87655 6887653 23666666432 22 211110000 0000 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCcee-EEEEEcC----Cch
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGL-VCFRLKG----DND 295 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~-v~f~~~~----~~~ 295 (367)
..++.. +.........+.|+.+..++ ..++..++.+++.+.|+++..+..+.+ ...+. ..+.+.. ...
T Consensus 318 --~~~T~~-g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~ 391 (442)
T PRK13360 318 --HGYTYS-GHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGK 391 (442)
T ss_pred --cCCCCC-CCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcch
Confidence 000111 11122344455566554443 456777888888888876532222211 11121 1222211 122
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
...++.+++.++|.+ +.+ .+ ..+|+++ ....|++|||+++++|++.++++
T Consensus 392 ~~~~~~~~l~~~Gvl-~~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 392 RAYEVFLKCFEKGLM-IRY---TG-DILALSP-PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred hHHHHHHHHHHCCcE-EEe---cC-CEEEEeC-CCccCHHHHHHHHHHHHHHHHHh
Confidence 345788888889853 432 22 4799965 56778999999999999998764
No 338
>PRK12403 putative aminotransferase; Provisional
Probab=99.03 E-value=4.1e-07 Score=89.73 Aligned_cols=228 Identities=13% Similarity=0.067 Sum_probs=122.3
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
++|++.+.+..+ .....|++.-....-|.+.| +++|.++|++||+++++|++++++.....-+.....++ ..|
T Consensus 209 ~~le~~~~~~~~--~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PD 285 (460)
T PRK12403 209 LQLEEKILELGA--ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPD 285 (460)
T ss_pred HHHHHHHHHhCC--CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCC
Confidence 456665543221 22345666655566688877 99999999999999999999976543322212112244 358
Q ss_pred eeeeccccccccCC-cceeEEEecchhhhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 144 SFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 144 ~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
+++ .-|.+++.+ .+|.++.++ + +.+.+.. ...|+...
T Consensus 286 iv~--~gK~lggG~~Piga~v~~~-~-i~~~~~~~~~~~~~~~------------------------------------- 324 (460)
T PRK12403 286 TLS--IAKGLTSGYVPMGGLVLSK-R-IAEALVEQGGVFAHGL------------------------------------- 324 (460)
T ss_pred eEE--EcccccccccceEEEEECH-H-HHHHHhcCCCccccCC-------------------------------------
Confidence 886 578887664 567777643 2 2222210 01111000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHhcCC-CCeEEeCC-CCc-eeEEEEEcCC----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI-SLAKKFADLVEKD-DRFELVCP-PSM-GLVCFRLKGD---- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~-~la~~l~~~L~~~-~g~~~~~~-~~~-~~v~f~~~~~---- 293 (367)
+-.+....+.+..+.|+.+..+. ..++.. ++.+++.+.|+++ ....++.. ... .+..+.+...
T Consensus 325 ------T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~ 395 (460)
T PRK12403 325 ------TYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATR 395 (460)
T ss_pred ------CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCcccc
Confidence 00111122344445565554443 344554 6666776666532 11112211 111 2223333211
Q ss_pred ---c---hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 294 ---N---DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 294 ---~---~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
. .....+.+.+.++|.+ +.+ .+ ..+|+++ ..-.|++|+|.+++.|+++++++.++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~Gll-~~~---~~-~~~~l~P-pl~it~~eid~~~~~l~~al~~~~~~ 456 (460)
T PRK12403 396 KRFANENDLAWRCRTIGFEEGVI-IRS---TL-GRMIMAP-ALVAGRAEIDELVDKTRIAVDRTARE 456 (460)
T ss_pred ccccchhHHHHHHHHHHHhCCEE-EEe---cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1123455666788844 322 12 2578854 45678999999999999999887543
No 339
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.03 E-value=2.6e-07 Score=90.17 Aligned_cols=225 Identities=13% Similarity=0.078 Sum_probs=123.8
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CC---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++.+++.+++.. .......|++.-.....|.. .| +++|.++|++||+++++|+.|.++......+.....++ .
T Consensus 182 ~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~ 259 (421)
T PRK06777 182 ALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV-K 259 (421)
T ss_pred HHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC-C
Confidence 3566777775321 11223455555555555643 34 89999999999999999999986533222111111122 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++ ..|.+++...+|+++.++ +.. +.+.. .. .
T Consensus 260 pDiv~--~sK~l~~G~pigav~~~~-~i~-~~~~~--~~-----~----------------------------------- 293 (421)
T PRK06777 260 PDLIT--MAKSLGGGMPISAVVGRA-EVM-DAPAP--GG-----L----------------------------------- 293 (421)
T ss_pred CCEEe--eehhhcCCCceEEEEEcH-HHH-hccCC--CC-----C-----------------------------------
Confidence 57654 578887656688887753 222 11110 00 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCC----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~---- 293 (367)
..+-.+......+..++|+.+.. +++.++..++.+++.++|+++ +.+.-+. +.-.++.+.+...
T Consensus 294 ----~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-g~G~~~~i~~~~~~~~~ 365 (421)
T PRK06777 294 ----GGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDIR-ARGSMVAVEFNDPQTGK 365 (421)
T ss_pred ----CCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEec-CceEEEEEEEecCccCC
Confidence 00001111223344444544333 456667778888888888764 3222221 2222223333211
Q ss_pred --chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 294 --NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 294 --~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
......+.+.+.++|. .+.++...+ .++|+++ ....++++++++++.|++.+.
T Consensus 366 ~~~~~~~~l~~~~~~~Gv-~i~~~~~~g-~~lr~~p-pl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 366 PSPEFTRQYQRQALEEGL-LLLSCGVHG-NVIRFLY-PLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred ccHHHHHHHHHHHHhCCe-EEeecCCCC-CEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Confidence 1234566667788884 444432222 5899965 346789999999999988753
No 340
>KOG0634|consensus
Probab=99.01 E-value=4.7e-07 Score=84.82 Aligned_cols=270 Identities=12% Similarity=0.132 Sum_probs=154.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC---CCcc-EEEEEecCCCcccccCCh---
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK---GLIP-CCLVATLGTTGTCAFDNL--- 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~---~~~~-~~vv~~~~~t~~G~i~dl--- 102 (367)
.-.|++...++.+....++..|++++.|+.|++ .+++|.|++.+..-... ...| ++-.+-.+.|+||..-.+
T Consensus 148 gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~err 226 (472)
T KOG0634|consen 148 GDHVLIEEYTYPSALQSMEALGVKIIPVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERR 226 (472)
T ss_pred CCceEEecccchHHHHhccccCceEEeccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHH
Confidence 456777788888888888888988888888655 46999999999754322 1224 344555678999987555
Q ss_pred hhHHHHHhhcCcEEEEecccccccccC---------hhh------hhhhCCCC--Ccc--eeee-ccccccccCCcceeE
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLL---------PEY------AHLKRGLE--YVD--SFAF-NAHKWLLTNHDCSAM 162 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~---------~~~------~~~~~~~~--~~D--~~~~-~~hK~l~~p~g~g~l 162 (367)
++|.+|||+|++.++.|..|....+.. +.+ +.....+- +.| ++.. +..|.+..+...|++
T Consensus 227 k~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~i 306 (472)
T KOG0634|consen 227 KKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWI 306 (472)
T ss_pred HHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEe
Confidence 789999999999999999987665541 000 00011110 111 2222 356777655556665
Q ss_pred EEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHH
Q psy3048 163 WVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMT 242 (367)
Q Consensus 163 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
...+ ..+++.+ ... +.++.....+...-+++.
T Consensus 307 t~~~-~~l~ril-------~~a----------------------------------------e~~t~~pSg~sq~iv~a~ 338 (472)
T KOG0634|consen 307 TGNS-LFLKRIL-------DLA----------------------------------------EVATSGPSGFSQGIVYAM 338 (472)
T ss_pred ecCH-HHHHHHh-------hhc----------------------------------------ceeecCcccccHHHHHHH
Confidence 5432 1232221 111 011111122334455666
Q ss_pred HHHhhHHHHHHHHHH----HHHHHHHHHHHhcC-CCC--eEEeCCCCce-eEEEEEc-------CC-chHHHHHHHHHhc
Q psy3048 243 LRSYGLKGLQAYLRK----HISLAKKFADLVEK-DDR--FELVCPPSMG-LVCFRLK-------GD-NDLTNQLYERLMS 306 (367)
Q Consensus 243 l~~~~~~g~~~~~~~----~~~la~~l~~~L~~-~~g--~~~~~~~~~~-~v~f~~~-------~~-~~~~~~l~~~L~~ 306 (367)
|+..|++|+-+.+.+ ..+.+..+.+.|.+ +|. ++++ +|..+ .++++++ .. ++.-..+..++.+
T Consensus 339 l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~-~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk 417 (472)
T KOG0634|consen 339 LKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYH-PPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVK 417 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEe-cCCcceEEEEEecccccccccchHHHHHHHHHHHHH
Confidence 777777765555444 33444555555544 343 3444 44444 3455554 11 2222345556677
Q ss_pred cCcEEEEEeEE-------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 307 HKQIYIIKASF-------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 307 ~g~~~~~~~~~-------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+|+..+.+..+ .++.++|++.. +...++++..++.+-..+++.
T Consensus 418 ~gV~~v~G~~F~v~p~~s~~kiffRls~a--~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 418 NGVKLVCGSWFMVDPESSWSKIFFRLSIA--FAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred CCeEEecCceeEEcCccCCCcceEEEEee--cCCHHHHHHHHHHHHHHHHHH
Confidence 77544433211 13459999774 345778888888887777764
No 341
>PRK07481 hypothetical protein; Provisional
Probab=99.00 E-value=3.8e-07 Score=89.73 Aligned_cols=215 Identities=13% Similarity=0.069 Sum_probs=117.5
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-c
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-D 158 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g 158 (367)
+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|++++ -|.+.+.+ -
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~P 290 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVP 290 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcC
Confidence 455666655555566655 89999999999999999999876543322111212344 4688777 57777652 4
Q ss_pred ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHH
Q psy3048 159 CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALK 238 (367)
Q Consensus 159 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+|.++.+++ .. ..+...... .. .+ .+..+-.+....+.+
T Consensus 291 i~av~~~~~-i~-~~~~~~~~~--~~---------~~----------------------------~h~~T~~gnpl~~aa 329 (449)
T PRK07481 291 LGATMVNAR-IA-DAFEANADF--GG---------AI----------------------------MHGYTYSGHPVACAA 329 (449)
T ss_pred ceEEEEcHH-HH-HHHhccCcc--cc---------cc----------------------------ccCCCCCCCHHHHHH
Confidence 777777543 22 111100000 00 00 000011112122233
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC----------chHHHHHHHHHh
Q psy3048 239 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD----------NDLTNQLYERLM 305 (367)
Q Consensus 239 ~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~----------~~~~~~l~~~L~ 305 (367)
..+.|+.+..+ +..++..++.+++.+.|+++. ...++.. ... .++.+.+..+ ......+.+.+.
T Consensus 330 a~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 330 ALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred HHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 44445544433 455667777888877776642 1222211 112 2223333211 123456778888
Q ss_pred ccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 306 SHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 306 ~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
++|.+ +.+. + ..+|+++ ....|++|||.++++|++.++++
T Consensus 407 ~~Gvl-~~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 ENGVL-VRPS---G-TKIILSP-PLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred hCCeE-EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 89853 4322 3 2578854 44568999999999999998765
No 342
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.00 E-value=8.2e-08 Score=93.69 Aligned_cols=225 Identities=9% Similarity=-0.003 Sum_probs=122.3
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecC-CCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
|++++++.++... ....+|++.-. ....|.+ ..+++|.++|++||+++++|++|.++.....-+.....++
T Consensus 190 d~~~l~~~l~~~~---~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv- 265 (428)
T PRK07986 190 DIAPFARLMAAHR---HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI- 265 (428)
T ss_pred HHHHHHHHHHhCC---CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-
Confidence 5677888886321 12234444432 3333443 3489999999999999999999965422211111111233
Q ss_pred CcceeeeccccccccC-CcceeEEEecchhhhhhccCCc-cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDR-VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGP 218 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (367)
..|+++ .-|.+.+. .-+|.++.+++ +...+.... ..+...
T Consensus 266 ~PDi~t--~gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~---------------------------------- 307 (428)
T PRK07986 266 APDILC--LGKALTGGTMTLSATLTTRE--VAETISNGEAGCFMHG---------------------------------- 307 (428)
T ss_pred CCCEEE--echhhhCCcccCcchhchHH--HHHHhhcCCCCccccC----------------------------------
Confidence 358776 46777654 24455555332 211111000 000000
Q ss_pred CCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CC-ceeEEEEEcCCchH
Q psy3048 219 GGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PS-MGLVCFRLKGDNDL 296 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~-~~~v~f~~~~~~~~ 296 (367)
.+. .+....+.+..+.|+.+..+ ++.++..++.+++++.|+++.....+.. .. ..++.+.+.. ...
T Consensus 308 -------~T~-~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~-~~~ 375 (428)
T PRK07986 308 -------PTF-MGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTR-PVN 375 (428)
T ss_pred -------CCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCC-ccc
Confidence 000 01222334445556655443 3466778888888888876522222211 11 2233444433 222
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
...+.+.+.++|.+ +.+. + ..+|+.+ ....+++||++++++|++.+++
T Consensus 376 ~~~~~~~l~~~Gl~-~~~~---g-~~i~~~P-pl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 376 MAALQRFFVEQGVW-IRPF---G-KLIYLMP-PYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 45788889999953 4322 3 4899954 5677899999999999998754
No 343
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.00 E-value=4.1e-07 Score=89.75 Aligned_cols=230 Identities=13% Similarity=0.130 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEec-CCCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++++++.++... .....|++.- .....|.+. =+++|.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 201 l~~le~~~~~~~---~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~ 276 (466)
T PRK07030 201 FAHMEQTLAEHH---DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-R 276 (466)
T ss_pred HHHHHHHHHhCC---CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-C
Confidence 456677775321 2234455443 234446553 378999999999999999999876543322222222344 4
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+.+.+ -.|.++.+++ .. ..+.....- .. .+
T Consensus 277 PDiv~~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~--~~---------~~------------------------- 316 (466)
T PRK07030 277 PDFLCL--SKALTGGYLPLAAVLTTDT-VY-QAFYDDYPT--LR---------AF------------------------- 316 (466)
T ss_pred CCEEee--ehhccCCcccceEEEecHH-HH-HHHhccccc--cc---------cc-------------------------
Confidence 688888 57777663 5777777543 22 111100000 00 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCce-eEEEEEcCCc----
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMG-LVCFRLKGDN---- 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~-~v~f~~~~~~---- 294 (367)
....+-.+....+.+..+.|+.+..+ ++.++..++.+++.+.|+++.....+.. ...+ ++.+.+....
T Consensus 317 ---~h~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~ 390 (466)
T PRK07030 317 ---LHSHSYTGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKT 390 (466)
T ss_pred ---ccCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccc
Confidence 00000011212234444555555443 3556777888888888866522211111 1222 2233332110
Q ss_pred ------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 295 ------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 295 ------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.....+.+.+.++|.+ +.+ .+ ..+|+.+ ....+++|||.+++.|++.++++.
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gvl-~~~---~g-~~i~~~P-pl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 391 PYPWQERRGLKVYQHALERGAL-LRP---LG-SVVYFLP-PYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred cCcchhHHHHHHHHHHHHCCeE-EEe---cC-CEEEEEC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 1124677888889953 432 23 4799854 566789999999999999999884
No 344
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.00 E-value=2.8e-07 Score=89.94 Aligned_cols=225 Identities=10% Similarity=0.057 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccC-C---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD-N---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~-d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++.+++.+++... ...+.+|++.-..++.|..- | +++|.++|++||+++++|+.++++......+.....++ ..
T Consensus 183 ~~~l~~~~~~~~~-~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~p 260 (421)
T PRK09792 183 LDAIERLFKSDIE-AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KP 260 (421)
T ss_pred HHHHHHHHHhccC-CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CC
Confidence 4677777754211 12245666666666777653 6 89999999999999999999987644332111111122 35
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++ +..|.+.+...+|+++.+++ ... .+. ......
T Consensus 261 Di~--t~gK~l~~G~pigav~~~~~-i~~-~~~--~~~~~~--------------------------------------- 295 (421)
T PRK09792 261 DLM--TMAKSLAGGMPLSGVVGNAN-IMD-APA--PGGLGG--------------------------------------- 295 (421)
T ss_pred cEE--EeehhhcCCCceEEEEEcHH-HHh-ccC--CCCcCC---------------------------------------
Confidence 754 44788887677888777432 221 110 000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeE-EeCCCC-ceeEEEEEcCCc-----
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFE-LVCPPS-MGLVCFRLKGDN----- 294 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~-~~~~~~-~~~v~f~~~~~~----- 294 (367)
+. .+....+.+..+.++.+..+ +..++.+++.+++.+.|+.+. .+. +..... -.++.+.+.+..
T Consensus 296 ----T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~ 367 (421)
T PRK09792 296 ----TY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPS 367 (421)
T ss_pred ----CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcc
Confidence 00 01111223333455554333 445566677777777665431 111 112223 234445554311
Q ss_pred -hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 295 -DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 295 -~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.....+...+.++|.+ +.+.. .....+|+.+ ....+++||+++++.|+++++
T Consensus 368 ~~~~~~l~~~~~~~Gv~-i~~~g-~~~~~irl~P-~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 368 AAIAQKIQQRALAQGLL-LLTCG-AYGNVIRFLY-PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred hHHHHHHHHHHHHCCcE-EeecC-CCCCEEEEeC-CCcCCHHHHHHHHHHHHHHHh
Confidence 2356788888899954 32211 1136899954 344789999999999998864
No 345
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.99 E-value=8.7e-08 Score=93.74 Aligned_cols=226 Identities=14% Similarity=0.119 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
+++|++++++.. ....+.+|++.-.....|.+.+ +++|.++|++||+++++|++|++.............++ ..
T Consensus 184 ~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~-~p 261 (425)
T PRK08088 184 IASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGV-AA 261 (425)
T ss_pred HHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCC-CC
Confidence 456887775321 1223445655555555566666 99999999999999999999986433221111111222 23
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
| ..+..|.++....+|+++.+. .... .+.. ... ...+
T Consensus 262 d--i~s~sK~l~~G~rig~v~~~~-~~~~-~~~~-------~~~-----~~t~--------------------------- 298 (425)
T PRK08088 262 D--LTTFAKSIAGGFPLAGVTGRA-EVMD-AIAP-------GGL-----GGTY--------------------------- 298 (425)
T ss_pred C--EEEEeccccCCCcceeeEecH-HHHh-hcCC-------CCC-----CCCC---------------------------
Confidence 5 355689998666688888743 2222 1110 000 0000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcC------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKG------ 292 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~------ 292 (367)
. +.......+...|+... .++..++.+++.+++++.|.+ .|.+.-+..+ -..+.+.+..
T Consensus 299 ----~---~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~ 367 (425)
T PRK08088 299 ----A---GNPIACAAALAVLKVFE---QENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSK 367 (425)
T ss_pred ----C---cCHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCC
Confidence 0 11111223333333332 234444555555555555543 3333222222 2335555521
Q ss_pred -CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 293 -DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 293 -~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
......++.+++.++|..+..... ....+|+++ ....+++||+..++.|++.++++
T Consensus 368 p~~~~~~~l~~~~~~~Gv~~~~~~~--~~~~iRl~~-~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 368 PNAKLTAQIVARARDKGLILLSCGP--YYNVLRILV-PLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEEC-CCCcCHHHHHHHHHHHHHHHHhh
Confidence 123356788888999965432111 136899965 45667999999999999988753
No 346
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.99 E-value=1.2e-06 Score=85.65 Aligned_cols=226 Identities=12% Similarity=0.064 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++++++.++... ....+..|++.-.....|.+. -+++|.++|++||+++++|+++.++......+.....++ ..
T Consensus 183 ~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~p 260 (425)
T PRK07495 183 LAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AA 260 (425)
T ss_pred HHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCC-CC
Confidence 344466554311 112244555554444456443 489999999999999999999976433221111111122 24
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++++ .|.++....+|++..+++ .. ..+. +.....
T Consensus 261 Di~tl--sK~l~~G~pigav~~~~~-i~-~~~~--~~~~~~--------------------------------------- 295 (425)
T PRK07495 261 DLTTM--AKGLAGGFPLAAVTGRAE-IM-DAPG--PGGLGG--------------------------------------- 295 (425)
T ss_pred CEEee--hhhhcCCccceEEEEcHH-HH-hccC--CCCcCC---------------------------------------
Confidence 65444 788876566778777432 22 1111 000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCe-EEeCCCCceeEEEEEcCC----
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRF-ELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~-~~~~~~~~~~v~f~~~~~---- 293 (367)
+. .+....+....++++.+..+. +.++..++.++++++|+++ |.+ ++-+. -.++.+.+.+.
T Consensus 296 ----T~-~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~--Gl~~~iel~~~~~~~ 365 (425)
T PRK07495 296 ----TY-GGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRGP--GFMNAVEFNDADSGL 365 (425)
T ss_pred ----CC-CCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC--ceEEEEEEecCCCCC
Confidence 00 111122233345565554433 4456666777777766553 221 11111 12333444321
Q ss_pred --chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 --NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 --~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+.... ...+|+.+ ....+++|+|.+++.|++.++++.
T Consensus 366 ~~~~~~~~~~~~~~~~Gvl-~~~~g~~-~~~~r~~P-pl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 366 PSAEFANRVRLKALEKGLI-LLTCGVH-GNVIRFLA-PITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred ccHHHHHHHHHHHHHCCeE-EeecCCC-CCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHh
Confidence 12345677888888854 3322111 36899965 567889999999999999987653
No 347
>KOG3843|consensus
Probab=98.98 E-value=1.2e-09 Score=95.72 Aligned_cols=276 Identities=16% Similarity=0.145 Sum_probs=164.3
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEec--C-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCC---cccccCChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRS--D-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTT---GTCAFDNLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t---~~G~i~dl~~I 105 (367)
.|+-.+....|..+.+.-.|.+++.|.. + +.-.-|++.+++.+++... -++...+.+| ..-..+.+++|
T Consensus 105 yiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~-----dcilci~sttscfapr~pd~leai 179 (432)
T KOG3843|consen 105 YIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGE-----DCILCIHSTTSCFAPRSPDNLEAI 179 (432)
T ss_pred EEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCC-----ceEEEEeecccccCCCCCchHHHH
Confidence 3444678999999999889998887765 2 3356789999999887653 2333333222 33445889999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+.||..|+++.+|..|||.-.--+-.-.......++.|.++-+..|.|+.|.|.+++..-+..+++. +...|.++..
T Consensus 180 aaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgras 256 (432)
T KOG3843|consen 180 AAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRAS 256 (432)
T ss_pred HHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCccc
Confidence 9999999999999999986443221111112234678999999999999998877765544444432 2334433322
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. .+ .+-+...|..+|..++.+...+..++.-|+
T Consensus 257 a-----~p------------------------------------------s~dllitll~~gqn~f~e~~~eqkemf~~l 289 (432)
T KOG3843|consen 257 A-----SP------------------------------------------SLDLLITLLSLGQNAFKELFGEQKEMFLKL 289 (432)
T ss_pred c-----Cc------------------------------------------cHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Confidence 1 11 123444556678888888888888888888
Q ss_pred HHHhcCCC---CeEEeCCCC---ceeEEEEEcCCc-hHH-HHHHHHHhccCcE---EEEE----eEECC-----------
Q psy3048 266 ADLVEKDD---RFELVCPPS---MGLVCFRLKGDN-DLT-NQLYERLMSHKQI---YIIK----ASFQG----------- 319 (367)
Q Consensus 266 ~~~L~~~~---g~~~~~~~~---~~~v~f~~~~~~-~~~-~~l~~~L~~~g~~---~~~~----~~~~~----------- 319 (367)
++++.+.. |-.++..|+ +...++..-+.. ..+ ..+-.-|..+|+- .++- +..+|
T Consensus 290 ~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~ 369 (432)
T KOG3843|consen 290 RNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTN 369 (432)
T ss_pred HHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccC
Confidence 87775531 322333221 111122211111 111 1333445555521 1110 11122
Q ss_pred ---eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCcccc
Q psy3048 320 ---RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGSSSVAKR 363 (367)
Q Consensus 320 ---~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~~~~~~~ 363 (367)
..++-++ +....++.|+|.|+..|...++...++...++....
T Consensus 370 e~~~~yln~a-~aigm~~hdld~~~~rl~~~~a~~~ke~akedd~~~ 415 (432)
T KOG3843|consen 370 EQHCAYLNAA-CAIGMKDHDLDEFFNRLDRCLAAFRKELAKEDDDIN 415 (432)
T ss_pred cCchhHhhHH-HhcCCcHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 2234342 245567899999999999888877766665554433
No 348
>PRK07483 hypothetical protein; Provisional
Probab=98.98 E-value=5.9e-07 Score=88.19 Aligned_cols=231 Identities=13% Similarity=0.096 Sum_probs=123.1
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCC-cccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTT-GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t-~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++|++++.... ......|++.-... .-|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..
T Consensus 186 ~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~P 262 (443)
T PRK07483 186 DELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-AP 262 (443)
T ss_pred HHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CC
Confidence 55666564211 11223444443222 2365544 89999999999999999999876644332222212234 46
Q ss_pred ceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|++++ -|.+.+.+ .+|.++.+++ .. ..+......+...
T Consensus 263 Div~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~h~------------------------------------- 301 (443)
T PRK07483 263 DLVTI--AKGLGAGYQPIGAVLASDR-IY-DAIADGSGFFQHG------------------------------------- 301 (443)
T ss_pred Ceeee--hhhhccCccccEEEEEcHH-HH-HHHhcCCCccccC-------------------------------------
Confidence 88877 57777664 5777777543 12 1111111011000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEeCC-CCce-eEEEEEcCC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-DRFELVCP-PSMG-LVCFRLKGD----- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~g~~~~~~-~~~~-~v~f~~~~~----- 293 (367)
.+-.+.........+.|+.+..+ ++.++..++.++|.++|+++ ....++.. ...+ ++.+.+...
T Consensus 302 -----~T~~gnpl~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~ 373 (443)
T PRK07483 302 -----HTYLGHATACAAALAVQRVIAED---GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKA 373 (443)
T ss_pred -----CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccC
Confidence 00011112223334445444443 35566777778887777542 12221111 1222 222333110
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEE--C--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASF--Q--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~--~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+... . ....+|+.+ ....+++|||.++++|++.+.++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~Gll-~~~~~~~~~~~~~~~l~~~P-pL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 374 PFDPALKLHARIKREAMARGLM-VYPMGGTIDGVRGDHVLLAP-PFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred CCCchhhHHHHHHHHHHHCCcE-EEecCccccCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12345788888999954 332211 0 125899955 567789999999999999988754
No 349
>PRK07036 hypothetical protein; Provisional
Probab=98.98 E-value=6.3e-07 Score=88.48 Aligned_cols=226 Identities=10% Similarity=0.047 Sum_probs=124.4
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhh-hCCCCCc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL-KRGLEYV 142 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~-~~~~~~~ 142 (367)
+.+++.+... ....+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.++......+-.. ..++ ..
T Consensus 207 ~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~P 283 (466)
T PRK07036 207 DEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QP 283 (466)
T ss_pred HHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CC
Confidence 3455555421 1223456666655566677777 9999999999999999999997653322111111 1233 35
Q ss_pred ceeeeccccccccCC-cceeEEEecchhhhhhccCC--cc--ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 143 DSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTD--RV--YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 143 D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~--~~--yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
|++++ -|.+.+.+ .+|.++.+++ .. ..+... +. |....
T Consensus 284 Divt~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~~--------------------------------- 326 (466)
T PRK07036 284 DIITF--AKGLTSGYQPLGAVIISER-LL-DVISGPNAKGNVFTHGF--------------------------------- 326 (466)
T ss_pred CEEEE--ccccccCccccEEEEEcHH-HH-HHHhcccCcCcccccCC---------------------------------
Confidence 87766 68777653 4777777543 22 211100 00 11000
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCc-eeEEEEEcCC--
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSM-GLVCFRLKGD-- 293 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~-~~v~f~~~~~-- 293 (367)
+. .+....+.+..+.|+.+..+ ++.++..++.++|.+.|+++....++.. ... .++.+.+..+
T Consensus 327 ---------T~-~gnpl~~aaa~a~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~ 393 (466)
T PRK07036 327 ---------TY-SGHPVACAAALKNIEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKG 393 (466)
T ss_pred ---------CC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCcc
Confidence 00 11112223334445544333 4566778888888888865422221111 112 2223333211
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+ .+ ..+|+++ ....|++|||.++++|++.++++.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~Gvl-~~~---~~-~~~~l~P-pl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 394 SKALLPEDIAIGQRIDRHCQERGLL-VRP---LE-HLCVLSP-PLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred ccCCCCchhHHHHHHHHHHHHCCcE-Eee---cC-CEEEEeC-CCcCCHHHHHHHHHHHHHHHHHHH
Confidence 11235677788889954 332 12 4678854 455689999999999998887763
No 350
>PRK06149 hypothetical protein; Provisional
Probab=98.95 E-value=2.9e-07 Score=98.63 Aligned_cols=227 Identities=11% Similarity=0.068 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhh-hhhhCCCCCc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYV 142 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~-~~~~~~~~~~ 142 (367)
+++++.++.....+..+.+|++.-.....|.+.| +++|.++|++||+++++|+.|.++......+ .....|+ ..
T Consensus 729 ~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~P 807 (972)
T PRK06149 729 RDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VP 807 (972)
T ss_pred HHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CC
Confidence 5666666543333334556666655566788888 9999999999999999999996543322111 1111244 46
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++++ -|.+++...+|+++.+++ +...+... .++++.
T Consensus 808 Divt~--gK~lg~G~Pl~av~~~~~--i~~~~~~~-~~~~sT-------------------------------------- 844 (972)
T PRK06149 808 DIITM--AKGMGNGHPLGAVITRRE--IAEALEAE-GYFFSS-------------------------------------- 844 (972)
T ss_pred CEEEe--cccccCCeeeEEEEEcHH--HHhhhccC-CcccCC--------------------------------------
Confidence 88755 688776656788877543 22222110 111110
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEeCC-CCce-eEEEEEcC-------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDR-FELVCP-PSMG-LVCFRLKG------- 292 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g-~~~~~~-~~~~-~v~f~~~~------- 292 (367)
..+....+....+.|+.+..+ ++.++..++.++|+++|+++.. ..++.. ...+ ++.+.+..
T Consensus 845 ------~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~ 915 (972)
T PRK06149 845 ------TGGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP 915 (972)
T ss_pred ------CCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC
Confidence 011112233444555555443 4556777778888888866411 112211 1122 22333321
Q ss_pred CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 293 DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 293 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.......+.+++.++|.+ +.+... ...++|+.+ ....+++|||.++++|++++.+
T Consensus 916 ~~~~~~~i~~~l~~~Gvl-~~~~g~-~~~vl~~~P-pl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 916 ATEETAAICDRLLELGVI-MQPTGD-HLNILKIKP-PLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred ChHHHHHHHHHHHhCCeE-EeecCC-CCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHh
Confidence 112345788889999954 443311 135899955 4567899999999999998764
No 351
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95 E-value=4.6e-07 Score=88.39 Aligned_cols=193 Identities=11% Similarity=0.074 Sum_probs=107.8
Q ss_pred CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCC-
Q psy3048 100 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTD- 177 (367)
Q Consensus 100 ~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~- 177 (367)
+.+++|.++|++||+++++|+++.++.....-+.....++ ..|++++ -|.+.+. ...|+++.++. +...+...
T Consensus 222 ~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~ 296 (422)
T PRK05630 222 ALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK--VAQLISTPN 296 (422)
T ss_pred HHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHH--HHHHHhccC
Confidence 5789999999999999999999966533222111112233 4587755 7888654 24566666432 21111100
Q ss_pred --ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHH
Q psy3048 178 --RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 178 --~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
..+. .. .+. .+....+....++|+.+..+. ..
T Consensus 297 ~~~~~~-h~-----------------------------------------~T~-~g~Pla~aaa~aaL~~l~~~~---~~ 330 (422)
T PRK05630 297 GGGALM-HG-----------------------------------------PTF-MANPLACAVAHASLEIIETGM---WR 330 (422)
T ss_pred CCCccc-cC-----------------------------------------CCC-cCCHHHHHHHHHHHHHHHhCc---HH
Confidence 0000 00 000 111122334445566554433 34
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCC-C-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCC
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCP-P-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETN 333 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~-~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~ 333 (367)
++..++.++|.+.|+.+.....+.+ . ...++.+.+.. ......+.+.+.++|. ++.+ .+ ..+|+.+ ....+
T Consensus 331 ~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~-~~~~~~~~~~~~~~Gl-~~~~---~g-~~l~~~P-pL~it 403 (422)
T PRK05630 331 KQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQ-PVDMEEATQAAVDHGV-WLRP---FG-RLVYVMP-PYITT 403 (422)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECC-cccHHHHHHHHHHCCe-EEEe---cC-CEEEEEC-CccCC
Confidence 5777778888877765322111111 1 12344454533 1224578888888984 3432 23 5899954 56778
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQSSE 350 (367)
Q Consensus 334 ~edid~li~~l~~~~~~ 350 (367)
++|+|.+++.|++.+++
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 352
>PRK05965 hypothetical protein; Provisional
Probab=98.94 E-value=1e-06 Score=86.84 Aligned_cols=232 Identities=16% Similarity=0.121 Sum_probs=128.3
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
+++++.++.... .....|++.-.....|.+ +=+++|.++|++||+++++|+.+.++.....-+.....++ ..|
T Consensus 202 ~~l~~~i~~~~~--~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PD 278 (459)
T PRK05965 202 AALRAKVAELGA--DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPD 278 (459)
T ss_pred HHHHHHHHhcCC--CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCC
Confidence 567777754221 123455555444444554 3468999999999999999999877644332222222344 468
Q ss_pred eeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 144 SFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 144 ~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
++++ -|.+.+.+ -+|.++.+++- . +.+....... ..+
T Consensus 279 iv~~--gKgl~gG~~Pi~av~~~~~i-~-~~~~~~~~~~-----------~~~--------------------------- 316 (459)
T PRK05965 279 LMTV--AKGLTSGYVPMGAVLMSDHV-Y-QGIADGAGAA-----------APV--------------------------- 316 (459)
T ss_pred eEEe--chhhccCCcceeEEEEcHHH-H-HHHhcccccc-----------ccc---------------------------
Confidence 8887 57777663 57887775432 2 1111100000 000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCce-eEEEEEcCC-------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMG-LVCFRLKGD------- 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~-~v~f~~~~~------- 293 (367)
....+-.+.........+.|+.+..+ ++.++..++.++|.++|+++....++.. ...+ ++.+.+..+
T Consensus 317 -~h~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~ 392 (459)
T PRK05965 317 -GHGYTYSAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPF 392 (459)
T ss_pred -cccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCC
Confidence 00000011112233344455555443 3556777888888888876532222211 1222 223333210
Q ss_pred ---chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 ---NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 ---~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
......+.+.+.++|.+ +.+ .+..++|+++ ..-.+++||+++++.|++.++++..
T Consensus 393 ~~~~~~~~~i~~~~~~~Gll-~~~---~g~~~i~~~P-pL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 393 DAALDPADRIFDRAYANGLV-FRA---FGDGVLGFAP-ALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred CchhHHHHHHHHHHHhCCeE-EEe---cCCcEEEEEC-CCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 01345677888889954 332 2446799965 4567899999999999999988743
No 353
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.94 E-value=2e-07 Score=92.01 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=122.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+++.. ....+|++.-.....|.+.| +++|.++|++||+++++|+++.++ .....+.....++ .
T Consensus 232 d~~~l~~~l~~~~---~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~ 306 (474)
T PLN02482 232 DLEAVKKLFEANK---GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-T 306 (474)
T ss_pred ChHHHHHHHHhCC---CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-C
Confidence 7899999886532 22456666666666787766 458999999999999999999654 3221111111234 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|.+++ -|.+++..-+|.+..++ +... .+.....+....
T Consensus 307 PDi~t~--gK~lggG~Pigav~g~~-ei~~-~~~~~~~~~~~~------------------------------------- 345 (474)
T PLN02482 307 PDLTTL--GKVIGGGLPVGAYGGRR-EIME-MVAPAGPMYQAG------------------------------------- 345 (474)
T ss_pred CCEEEe--cchhhCCCceEEEEEcH-HHHH-hhccCCCccccc-------------------------------------
Confidence 587655 78887765577876543 3222 111000000000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcC------
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKG------ 292 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~------ 292 (367)
+. .+......+..+.|+.+.. ++..++..++.++|+++|+++. ++.+......+++.+.+..
T Consensus 346 -----T~-~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~ 416 (474)
T PLN02482 346 -----TL-SGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNF 416 (474)
T ss_pred -----Cc-chhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccCh
Confidence 00 0111122334445555533 3456677788888888886641 2232211111233222211
Q ss_pred ------CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 293 ------DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 293 ------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+......+...+.++|. ++.+..... ++ + ....|++|||++++++++++++
T Consensus 417 ~~~~~~d~~~~~~~~~~l~~~Gv-~~~~~~~~~----~~-p-sl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 417 ADAKKSDTAKFARFHRGMLEEGV-YLAPSQFEA----GF-T-SLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred hhhccCCHHHHHHHHHHHHHCCe-EEeccCCCC----Cc-C-CCCCCHHHHHHHHHHHHHHHHh
Confidence 11223467778888884 444321111 12 2 3445799999999999998765
No 354
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.93 E-value=6e-07 Score=88.46 Aligned_cols=212 Identities=10% Similarity=0.081 Sum_probs=116.3
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
...|++.-.....|.+.| ++++.++|++||+++++|+.+.++.....-+.....++ ..|++++ -|.+++..-+
T Consensus 226 iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi 302 (459)
T PRK06931 226 PAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPL 302 (459)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcce
Confidence 345555444444455533 79999999999999999999877644332222222344 4688877 5777665556
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|.+..++ . + ..+. +....+ +. .+....+...
T Consensus 303 ~av~~~~-~-~-~~~~--~~~~~~-------------------------------------------T~-~gnpla~aaa 333 (459)
T PRK06931 303 AVLGIKK-E-F-DAWQ--PGGHTG-------------------------------------------TF-RGNQLAMATG 333 (459)
T ss_pred eeeeeHH-H-H-hhcc--CCCCCC-------------------------------------------CC-CCCHHHHHHH
Confidence 7666542 2 2 2111 100000 00 1111222333
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCce-eEEEEEcCC-------------chHHHHHHHH
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSMG-LVCFRLKGD-------------NDLTNQLYER 303 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~~-~v~f~~~~~-------------~~~~~~l~~~ 303 (367)
.+.|+.+..++ ..++..++.++|.++|+++. ...++.. ...+ ++.+.+... ......+.+.
T Consensus 334 la~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
T PRK06931 334 LTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKA 410 (459)
T ss_pred HHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHH
Confidence 44455444433 44566777777777776531 1111111 1122 223333211 1223567778
Q ss_pred HhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 304 LMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 304 L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+.++|.+ +.+... ....+|+.+ ....+++|||.++++|++.++++.+
T Consensus 411 ~~~~Gvl-~~~~~~-~~~~l~~~P-pl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 411 CFENGLL-LERGGR-NGNVVRLLP-PLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred HHHCCcE-EeecCC-CCCEEEEEC-CCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 8888854 432211 235799965 5667899999999999999887543
No 355
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=8.3e-07 Score=87.33 Aligned_cols=227 Identities=12% Similarity=0.156 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEec-CCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++++++.++... .....|++.- .....|.+ +=++++.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 208 ~~~l~~~l~~~~---~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~ 283 (453)
T PRK06943 208 LADVRRLFAERA---GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-W 283 (453)
T ss_pred HHHHHHHHHhCC---CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-C
Confidence 467777775321 2234455543 13445654 3479999999999999999999876644332222222344 4
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+.+.+ .+|.++.+++ .. ..+.... ... .+
T Consensus 284 PDivt~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~-----~~~-------~~------------------------- 322 (453)
T PRK06943 284 PDFLCL--SKGISGGYLPLSLVLSRDA-IF-AAFYDDD-----VTR-------GF------------------------- 322 (453)
T ss_pred CCeEee--ehhhccCcccceEEEEcHH-HH-HhhcccC-----ccC-------Cc-------------------------
Confidence 688888 57777663 5777777543 22 2111000 000 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCce-eEEEEEcCC---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMG-LVCFRLKGD--- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~-~v~f~~~~~--- 293 (367)
....+-.+......+..+.|+.+..+ ++.++..++.+++.++|+++ +++.-+ ...+ ++.+.+..+
T Consensus 323 ---~~~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v--rG~Gl~~gvel~~~~~~ 394 (453)
T PRK06943 323 ---LHSHSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHL--RQRGTIFAFDVALDGDA 394 (453)
T ss_pred ---cCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeE--eccccEEEEEEccCCCc
Confidence 00000011112223344445555443 34556677777777777654 333211 1222 223333211
Q ss_pred -chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 -NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 -~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+.+.+.++|.+ +.+ .+ ..+|+++ ..-.|++|||++++.|++.++++.
T Consensus 395 ~~~~~~~i~~~~~~~Gll-~~~---~g-~~l~~~P-pl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 395 ARTFSRRFFEAALERELL-LRP---IG-TTVYLMP-PYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred chHHHHHHHHHHHHCCcE-EEe---cC-CEEEEeC-CCcCCHHHHHHHHHHHHHHHHHHH
Confidence 12345788888899954 332 23 3699964 456789999999999999988763
No 356
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=1.1e-07 Score=84.98 Aligned_cols=226 Identities=14% Similarity=0.145 Sum_probs=128.2
Q ss_pred CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhcCcEEEEeccccccc---ccChhhhhhh
Q psy3048 63 GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSA---LLLPEYAHLK 136 (367)
Q Consensus 63 ~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~gi~l~vD~a~~~~~---~~~~~~~~~~ 136 (367)
++.|.++|.-. +.+ .+|+++-++|+||.+ +++.+|.++|++||+++++|.|||... .+.+. ....
T Consensus 167 Y~vDF~~l~i~--e~~------g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~-~~~w 237 (417)
T COG3977 167 YHVDFEHLHIG--EST------GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDA-TPLW 237 (417)
T ss_pred eccCHHHcccc--ccc------ceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccc-cccC
Confidence 56677666522 333 489999999999998 689999999999999999999997532 12221 1111
Q ss_pred CCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCC
Q psy3048 137 RGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSK 216 (367)
Q Consensus 137 ~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (367)
. .--+.++|..|.......||+++... ..++-..+... +-+ .
T Consensus 238 ~---~NiilC~SLSK~GLPG~R~GIiIane-~viqaitnmn~--iis--------------------------------L 279 (417)
T COG3977 238 N---ENIILCMSLSKLGLPGSRCGIIIANE-KVIQAITNMNG--IIS--------------------------------L 279 (417)
T ss_pred C---CCEEEEeehhhcCCCCcceeEEEccH-HHHHHHHhccc--eee--------------------------------e
Confidence 1 12578889999887778899887643 32221111110 000 0
Q ss_pred CCCCCccccccccccccccHHHHHH----HHHHhhHHHHHHHHHH-HHHHHHHHHHHhcCCCCeEEeCCCCcee-EEEEE
Q psy3048 217 GPGGGVIQHWQTPLSRRFRALKLWM----TLRSYGLKGLQAYLRK-HISLAKKFADLVEKDDRFELVCPPSMGL-VCFRL 290 (367)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~g~~~~~~~-~~~la~~l~~~L~~~~g~~~~~~~~~~~-v~f~~ 290 (367)
.|| +.-.+++..+ .|..+..+-++-..++ .+..-..++..|.+. .+. ++.|+-.+ .++++
T Consensus 280 ap~------------~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~-iHkpEGAIFlWLWf 345 (417)
T COG3977 280 APG------------RMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCL-IHKPEGAIFLWLWF 345 (417)
T ss_pred cCC------------CccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-cee-eecCCcceeehhhh
Confidence 000 0000111110 1112222223333322 223333344455432 233 34444333 34455
Q ss_pred cCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 291 KGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 291 ~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.+....+.+++++|..+|.+++.+..+ ...-|+|++... +++.|++-++.|.+-++++-
T Consensus 346 ~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~---~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 346 KDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP---EPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred ccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCC---CHHHHHHHHHHHHHHHHHHH
Confidence 554556789999999999776654332 224599996643 68889998888877776653
No 357
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.91 E-value=2.8e-07 Score=90.05 Aligned_cols=225 Identities=11% Similarity=0.053 Sum_probs=121.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh----hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL----EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl----~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++.+++.. ..+.+|++.-..+..|.+.|. ++|.++|++||+++++|++|.++ .....+.....++ .
T Consensus 187 d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~ 261 (433)
T PRK00615 187 DFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-K 261 (433)
T ss_pred CHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-C
Confidence 7899999886432 224566666666667887775 49999999999999999999654 2222121112234 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++ .-|.+++..-+|+++.+++ ... .+... .+....
T Consensus 262 PDi~~--~gK~lggG~p~~av~~~~~-i~~-~~~~~-~~~~~~------------------------------------- 299 (433)
T PRK00615 262 PDITV--YGKILGGGLPAAAVVAHKS-IMD-HLAPE-GTIFQA------------------------------------- 299 (433)
T ss_pred CCeEE--EcccccCCcceeeeeecHH-HHh-hhcCC-CCcccC-------------------------------------
Confidence 58766 4788875444666666432 221 11100 000000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGD----- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~----- 293 (367)
.+-.+....+.+..+.|+.+..+ +..++..++.+++.++|++. .|+.+.....-.++.+.+...
T Consensus 300 -----~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~ 371 (433)
T PRK00615 300 -----GTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNL 371 (433)
T ss_pred -----CCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCCh
Confidence 00011112234445555555433 34556667777776655442 133321111112222333211
Q ss_pred -------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 -------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 -------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+...|.++|. ++.+..... .+++ ...+++|||+++++++++++++.
T Consensus 372 ~~~~~~~~~~~~~~~~~l~~~Gv-~~~~~~~~~-~~ls-----~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 372 AEAQLSDIEAFQTFYQSAFSKGV-YLSPSPFEA-SFLS-----SAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHhhCCHHHHHHHHHHHHHCCe-eecCccccc-ccee-----cCCCHHHHHHHHHHHHHHHHHHh
Confidence 2234467888888984 443322111 1222 22279999999999999988764
No 358
>KOG2467|consensus
Probab=98.91 E-value=8.7e-08 Score=87.76 Aligned_cols=243 Identities=16% Similarity=0.130 Sum_probs=143.5
Q ss_pred CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 61 DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 61 ~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
.+|-||.|.||+....- +|.+++.. .+...-.-|.+++.+||.+.|+++.+|=||=.+........ +.++
T Consensus 172 ~TG~IDYD~Le~~A~~f-----rPk~iiaG--~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vip---sPFe 241 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLF-----RPKLIIAG--TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIP---SPFE 241 (477)
T ss_pred CCCceehHHHHHHHHhc-----CCcEEEec--cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCC---Cccc
Confidence 57999999999875443 35554333 34455566899999999999999999999854444332222 3467
Q ss_pred CcceeeeccccccccCCcceeEEEecchh-hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANH-LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPG 219 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (367)
.||+++...||.|.+|.| |++++|+.-. .+.-....-.|=.. ...++ .+ . |
T Consensus 242 y~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE-------~kINf--------aV-F----------P- 293 (477)
T KOG2467|consen 242 YCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLE-------DKINF--------AV-F----------P- 293 (477)
T ss_pred ccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceechh-------hhhhh--------hc-c----------c-
Confidence 899999999999999865 5666655311 11000000011000 01111 00 0 0
Q ss_pred CCccccccccccccccH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCc---
Q psy3048 220 GGVIQHWQTPLSRRFRA-LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGDN--- 294 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~--- 294 (367)
.+++++.-.. .++..+|+.-..-.+.+..++...+++.|.+.|.+. |++++.. ...+++.+.+.+..
T Consensus 294 -------~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~dG 365 (477)
T KOG2467|consen 294 -------GLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGVDG 365 (477)
T ss_pred -------cccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCCch
Confidence 1223332222 345566777666778888899999999999999887 8898763 35567777665532
Q ss_pred hHHHHHHHHHh--ccCcEEEEEeEECCeeEEEEEe---cCCCCCHHHHHHHHHHHHHHHH
Q psy3048 295 DLTNQLYERLM--SHKQIYIIKASFQGRPFLRFVV---TSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 295 ~~~~~l~~~L~--~~g~~~~~~~~~~~~~~lRi~~---~~~~~~~edid~li~~l~~~~~ 349 (367)
...+.+++.+. .+....+.....-.++.+|+.- +.....++|.+++.+-|.+.++
T Consensus 366 arvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 366 ARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred HHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 12233443321 1111111111222356789832 2233448899988888876544
No 359
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.91 E-value=1.5e-06 Score=85.92 Aligned_cols=229 Identities=15% Similarity=0.178 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEec-CCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++.+++.++.. ......|++.- .....|.+ .=++++.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 223 ~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~ 298 (472)
T PRK08742 223 ADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-M 298 (472)
T ss_pred HHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-C
Confidence 56667766522 12234444443 13344654 3478999999999999999999876544322222222344 4
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+++.+ .+|.++.+++ .. ..+..... .. .+
T Consensus 299 PDiv~~--gKgl~gG~~Plaav~~~~e-i~-~~~~~~~~---~~---------~~------------------------- 337 (472)
T PRK08742 299 PDLLCL--SKGLTGGFLPLSAVLATQQ-LY-DAFLDDSR---ER---------AF------------------------- 337 (472)
T ss_pred CCEEEE--cccccCCCCCcceeeccHH-HH-HHhhccCc---cC---------cc-------------------------
Confidence 688887 57776653 4777777543 11 11110000 00 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCc-eeEEEEEcCC-c---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSM-GLVCFRLKGD-N--- 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~-~~v~f~~~~~-~--- 294 (367)
.+..+-.+......+..+.|+.+..+++ .++..++.+++.+.++.+....++.+ ... .++.+.+..+ +
T Consensus 338 ---~h~~T~~gnpl~~Aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~ 411 (472)
T PRK08742 338 ---LHSHSYTGNPLACAAALATLDIFADDDV---IARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRT 411 (472)
T ss_pred ---CcCCCCCccHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccc
Confidence 0000011121223444455555555443 34555666666655544322222221 122 2223333211 0
Q ss_pred ------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 295 ------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 295 ------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.....+.+.+.++|.+ +.+ .+ ..+|+.+ ....+++|||.+++.|++.++++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~Gll-~~~---~g-~vi~~~P-pL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 412 PFPPAARVGLHAYRAALARGVV-LRP---LG-DVLYWMP-PYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred cCCchhHHHHHHHHHHHHCCeE-EEe---cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1124677788888854 432 23 5899965 567789999999999999988753
No 360
>PRK06148 hypothetical protein; Provisional
Probab=98.90 E-value=4.3e-07 Score=97.47 Aligned_cols=228 Identities=13% Similarity=0.091 Sum_probs=130.7
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccCh-hhhhhhCCCCCc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLP-EYAHLKRGLEYV 142 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~~~~ 142 (367)
+.+++.++....++..+..|++.-....-|.+.| +++|.++|++||+.+++|+.+.++..... -+.+...++ ..
T Consensus 769 ~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~P 847 (1013)
T PRK06148 769 ESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VP 847 (1013)
T ss_pred HHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Cc
Confidence 4566666432222334556666655555677766 99999999999999999999976543221 111222344 46
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++++ -|.+++..-+|.++.+++ +...+.....+.
T Consensus 848 Divt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~~----------------------------------------- 882 (1013)
T PRK06148 848 DIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEYF----------------------------------------- 882 (1013)
T ss_pred ceeee--cccccCCcceEEEEEcHH--HHhhccCCCccc-----------------------------------------
Confidence 88777 688877777888887532 222111000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCce-eEEEEEcCC------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSMG-LVCFRLKGD------ 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~~-~v~f~~~~~------ 293 (367)
.+-.+....+.+..+.|+.+..+ ++.++..++.++|+++|+++. ...++.. ...+ ++.+.+..+
T Consensus 883 ----~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~ 955 (1013)
T PRK06148 883 ----NTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP 955 (1013)
T ss_pred ----cCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc
Confidence 00011212234444555555444 455667788888888876641 1112111 1112 223333211
Q ss_pred -chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 -NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 -~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
......+.+.+.++|.+ +.+.... ...+|+.+ ....+++|||.+++.|+++++++
T Consensus 956 ~~~~~~~i~~~~~~~Gvl-~~~~g~~-~~vlr~~P-pl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 956 ATAIARYVKNGARERGIL-IGTEGPH-DNVLKIRP-PLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred cHHHHHHHHHHHHhCCeE-EeccCCC-CCEEEEeC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 12345788888999954 4332111 36899965 56678999999999999998764
No 361
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.90 E-value=2.5e-07 Score=90.80 Aligned_cols=221 Identities=12% Similarity=0.087 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++++++.+.+. ...+..|++.-....-|.+ ..+++|.++|++||+++++|+.+.++.....-+.....++ ..
T Consensus 212 ~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~P 287 (443)
T PRK08297 212 LAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RP 287 (443)
T ss_pred HHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CC
Confidence 34555666532 2234566666555555665 6789999999999999999999976533221111111233 46
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|++++ -|.+ | .|.++..+. +..... ..+... .
T Consensus 288 Div~~--gK~l--~--~~a~l~~~~--i~~~~~---~~~~~~-~------------------------------------ 319 (443)
T PRK08297 288 DIVAF--GKKT--Q--VCGIMAGRR--VDEVED---NVFAVS-S------------------------------------ 319 (443)
T ss_pred CEEEe--cccc--c--ccceecchH--HHHhhh---hhccCc-c------------------------------------
Confidence 88875 5665 2 334444332 111000 000000 0
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCe--EEeCCCCceeEEEEEcCCchH
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRF--ELVCPPSMGLVCFRLKGDNDL 296 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~--~~~~~~~~~~v~f~~~~~~~~ 296 (367)
....+-.+......+..+.|+.+..+ ++.++..++.+++.++|+++ +.+ ++- ..-.++.+.+.. ...
T Consensus 320 -~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g~G~~~~i~~~~-~~~ 392 (443)
T PRK08297 320 -RINSTWGGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVR--GRGLMCAFDLPT-TAD 392 (443)
T ss_pred -ccCCCCCccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--ccceEEEEEecC-HHH
Confidence 00011111112223334444444333 45566777778887777653 322 221 123445555543 334
Q ss_pred HHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 297 TNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
...+.+.+.++|.+ +.+ .+...+|+++ ....+++|+|.++++|+++++++
T Consensus 393 ~~~~~~~l~~~Gvl-~~~---~~~~~lr~~P-~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 393 RDEVIRRLWEEGVL-VLP---CGERSIRFRP-ALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHCCEE-Eec---CCCCeEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 56788889988854 432 2335799965 46678999999999999998764
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.89 E-value=3e-07 Score=90.07 Aligned_cols=217 Identities=14% Similarity=0.106 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
++++++.+.. ....+..|++.-.....|.+ +.+++|.++|++||+.+++|+.++++.....-+.....++ ..
T Consensus 205 l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~P 280 (431)
T TIGR03251 205 LRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QP 280 (431)
T ss_pred HHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CC
Confidence 3444555542 12235567776665656765 4789999999999999999999986544322212212234 46
Q ss_pred ceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 143 DSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 143 D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
|+++++ |.+ | .+|++ ..+. +..... ........
T Consensus 281 Di~~~g--K~~--~-~~g~~-~~~~--i~~~~~---~~~~~~~~------------------------------------ 313 (431)
T TIGR03251 281 DIVAFG--KKT--Q-VCGIM-AGRR--VDEVAD---NVFAVPSR------------------------------------ 313 (431)
T ss_pred CEEEec--ccC--c-cceEE-ecch--HHHhhh---hcccCccc------------------------------------
Confidence 888764 433 2 34444 3222 111000 00000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCC-ceeEEEEEcCCchHH
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPS-MGLVCFRLKGDNDLT 297 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~-~~~v~f~~~~~~~~~ 297 (367)
...+-.+......+..++|+.+..++ +.++..++.+++.++|++ .+++. ..... -.++.+.++. ....
T Consensus 314 --~~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i-~~vrg~G~~~~i~~~~-~~~~ 386 (431)
T TIGR03251 314 --LNSTWGGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLV-SNPRGRGLMCAFDLPS-TADR 386 (431)
T ss_pred --cCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccce-ecccccceeEEEEeCC-HHHH
Confidence 00000111122344445555554444 334555566666655544 33221 11122 2344566643 3345
Q ss_pred HHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 298 NQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 298 ~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
..+.+.|.++|.+ +.+ .+...+|+++ ...++++|||+++++|++
T Consensus 387 ~~~~~~l~~~Gvl-~~~---~g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 387 DEVIRQLYREGVL-LLG---CGERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHhCCeE-Eec---CCCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 5788889988854 332 2335799965 577899999999999876
No 363
>PRK07482 hypothetical protein; Provisional
Probab=98.89 E-value=1.7e-06 Score=85.32 Aligned_cols=234 Identities=12% Similarity=0.063 Sum_probs=124.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++++|++.++... .....+|++.-.....|.+ .=+++|.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 205 ~~~~l~~~~~~~~--~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~ 281 (461)
T PRK07482 205 CADELEELILAEG--PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-E 281 (461)
T ss_pred HHHHHHHHHHhcC--CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-C
Confidence 4567777775321 1223455555444444555 2468999999999999999999877644332222222344 4
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+.+.+ .+|.++.+++ .. ..+...... .+ .+ .
T Consensus 282 PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~--~~---------~~--------------------~---- 322 (461)
T PRK07482 282 PDLITV--AKGLTSAYAPLSGSIVGEK-VW-DVLEQGSDE--HG---------AI--------------------G---- 322 (461)
T ss_pred CCEEEE--ccccccCccccceeeecHH-HH-HHHhccccc--CC---------cc--------------------c----
Confidence 688886 58887654 5677776543 11 111100000 00 00 0
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEeCC-CCc-eeEEEEEcCCc---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-DRFELVCP-PSM-GLVCFRLKGDN--- 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~g~~~~~~-~~~-~~v~f~~~~~~--- 294 (367)
...+. .+....+.+..+.|+.+..++ ..++..++.+++.++|+++ ....++.. ... .++.+.+....
T Consensus 323 ---h~~T~-~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~ 395 (461)
T PRK07482 323 ---HGWTY-SGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDR 395 (461)
T ss_pred ---cCCCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcC
Confidence 00000 112122334445555554433 4455667777777777542 11111111 122 22233332110
Q ss_pred -------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 295 -------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 295 -------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.....+.+.+.++|.+ +.+. .+...+|+.+ ....+++|||++++.|++.++++.
T Consensus 396 ~~~~~~~~~~~~i~~~~~~~Gvl-~~~~--~~~~~i~~~P-pl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 396 TPFDPALKIGPQVSAAALERGVI-ARAM--PHGDILGFAP-PLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred CCCChhhHHHHHHHHHHHHCCcE-EecC--CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1235778888999954 3211 1235799854 566789999999999999988763
No 364
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.89 E-value=1.3e-06 Score=86.16 Aligned_cols=231 Identities=13% Similarity=0.114 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEec-CCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
+++.+++.++.. +.....|++.- .....|.+ +=++++.++|++||+++++|+.+.++.....-+.....++
T Consensus 209 ~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv- 284 (460)
T PRK06916 209 HLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV- 284 (460)
T ss_pred HHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-
Confidence 356667767532 12234455443 23444554 3478999999999999999999876533332222222344
Q ss_pred CcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPG 219 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (367)
..|++++ -|.+.+.+ .+|.++.+++ .. ..+. +.+.... .+
T Consensus 285 ~PDiv~~--gK~l~gG~~Pi~av~~~~e-i~-~~~~--~~~~~~~---------~~------------------------ 325 (460)
T PRK06916 285 TPDIMTA--GKGLTGGYLPIAITVTTDE-IY-NAFY--GDYEEQK---------TF------------------------ 325 (460)
T ss_pred CCCeeee--ehhhhcCccccceeeecHH-HH-HHhh--ccccccC---------cc------------------------
Confidence 4688766 67776653 5777777543 22 1111 0000000 00
Q ss_pred CCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCce-eEEEEEcCCc---
Q psy3048 220 GGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMG-LVCFRLKGDN--- 294 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~-~v~f~~~~~~--- 294 (367)
.+..+-.++...+....+.|+.+..+ ++.++..++.+++.+.|+++....++.. ...+ ++.+.+..+.
T Consensus 326 ----~~~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~ 398 (460)
T PRK06916 326 ----FHGHSYTGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETK 398 (460)
T ss_pred ----ccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccc
Confidence 00000111212233344445544443 3556778888888888876532211211 1221 2223332110
Q ss_pred -------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 295 -------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 295 -------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.....+...+.++|.+ +.+ .+ ..+|+.+ ....+++|||.++++|++.++++.
T Consensus 399 ~~~~~~~~~~~~i~~~~~~~Gvl-~~~---~g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 399 EPFEWTERVGVQVCKRSRELGML-TRP---LG-NTIVFMP-PLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred cCCCchhhHHHHHHHHHHHCCeE-EEe---cC-CEEEEeC-CcccCHHHHHHHHHHHHHHHHhhc
Confidence 1134677888889954 432 23 4799854 566789999999999999988754
No 365
>PRK06917 hypothetical protein; Provisional
Probab=98.88 E-value=2e-06 Score=84.54 Aligned_cols=233 Identities=13% Similarity=0.078 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
++.+++.++.... ....+|++.-..... |.+ +=+++|.++|++||+++++|+.+.++.....-+.....++ .
T Consensus 185 ~~~le~~i~~~~~--~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~ 261 (447)
T PRK06917 185 ATELETAIERIGA--EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-E 261 (447)
T ss_pred HHHHHHHHHhcCC--CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-C
Confidence 3566666653221 123445544333223 344 2378999999999999999999876533322221112233 3
Q ss_pred cceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+++.+ ..|++..+++ .. ..+......+...
T Consensus 262 PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~~~~~~------------------------------------ 301 (447)
T PRK06917 262 PDIMTL--GKGLGAGYTPIAATVVSDR-VM-EPILRGSRSIMSG------------------------------------ 301 (447)
T ss_pred CCEEEe--eehhccCCcceEEEEEcHH-HH-HHHhccCcccccc------------------------------------
Confidence 587666 68887653 4677776542 22 2111111111000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCC-CCc-eeEEEEEcCC----
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCP-PSM-GLVCFRLKGD---- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~-~~~-~~v~f~~~~~---- 293 (367)
.+-.++.....+..+.|+.+..+ ++.++..++.++|.+.|+++. ...++.. ... .++.+.+..+
T Consensus 302 ------~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~ 372 (447)
T PRK06917 302 ------HTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTK 372 (447)
T ss_pred ------cCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcC
Confidence 00011112233444455554433 355677777788877776642 1222211 112 2223333110
Q ss_pred ------chHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 ------NDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 ------~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
......+.+.+.++|.+ +.+... .....+|+++ ....|++|||.++++|++.++++..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~Gvl-~~~~~~~~~g~~~~~i~l~P-pl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 373 QPFSKSQAVASELISVAAKNGLL-LYPAVAGQDGKEGDAVIIAP-PMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCcchhHHHHHHHHHHHhCCcE-EEecccccCCCCCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 12345777888899954 433211 1135899954 4567899999999999999988743
No 366
>PRK07480 putative aminotransferase; Validated
Probab=98.88 E-value=1.3e-06 Score=86.04 Aligned_cols=228 Identities=12% Similarity=0.052 Sum_probs=120.4
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
+.|++.+.+.. ......|++.-.....|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|
T Consensus 206 ~~l~~~~~~~~--~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PD 282 (456)
T PRK07480 206 RQLEAKILELG--ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPD 282 (456)
T ss_pred HHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCC
Confidence 45555553321 112345555544444577665 89999999999999999999976533222111112244 458
Q ss_pred eeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 144 SFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 144 ~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
++++ -|.+.+.+ .+|.++.+++ .. ..+......+...
T Consensus 283 iv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~-------------------------------------- 320 (456)
T PRK07480 283 LMTI--AKGLTSGYIPMGAVGVGDR-VA-EVLIEEGGEFNHG-------------------------------------- 320 (456)
T ss_pred eeee--ehhhccCCccceEEEEcHH-HH-HHHhcCCCCcccC--------------------------------------
Confidence 7666 68777642 3677777533 22 2220000000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHhcCCCCeEEeCC-CCc-eeEEEEEcCC------
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH-ISLAKKFADLVEKDDRFELVCP-PSM-GLVCFRLKGD------ 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~-~~la~~l~~~L~~~~g~~~~~~-~~~-~~v~f~~~~~------ 293 (367)
.+-.+....+.+..+.|+.+..++ ..++. .++.++|.++|+++....++.. ... .++.+.+..+
T Consensus 321 ----~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~ 393 (456)
T PRK07480 321 ----FTYSGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRER 393 (456)
T ss_pred ----CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEecccccccc
Confidence 000111122344445555554444 33455 3666677666655422111111 111 2223333110
Q ss_pred ----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 ----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 ----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
......+.+.+.++|.+ +.+ .+ ..+|+++ ....+++|||.+++.|++.+.++.+
T Consensus 394 ~~~~~~~~~~~~~~~~~~Gll-~~~---~~-~~l~~~P-pl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 394 FEAGGGVGTICRDHCFANGLI-MRA---VG-DRMIISP-PLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred CcchhhHHHHHHHHHHHCCcE-Eee---cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01124667778889954 332 22 4799854 4566899999999999999887644
No 367
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.87 E-value=9.8e-07 Score=84.29 Aligned_cols=206 Identities=14% Similarity=0.066 Sum_probs=117.7
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CC---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|++.+++.+.+.+ ..|++......-|.+ .| +++|.++|++||+++++|+.+.+. ....-+.....++ .
T Consensus 151 d~~~l~~~i~~~~------aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~ 222 (364)
T PRK04013 151 DVEAAKEAITKET------AAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-E 222 (364)
T ss_pred CHHHHHHHhcCCc------EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCC-C
Confidence 6788888886433 466666554444554 34 999999999999999999998865 3222222212233 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ -|.+++..-+|.++.+.. +. +.. ..
T Consensus 223 PDiv~~--gK~lggG~P~~a~~~~~~--~~------~~~--~~------------------------------------- 253 (364)
T PRK04013 223 PDIVTM--GKGIGNGVPVSLTLTNFD--VE------RGK--HG------------------------------------- 253 (364)
T ss_pred CCEEEe--cccccCCceeEEEEeccc--cc------CCC--cC-------------------------------------
Confidence 587777 577766555666665432 10 000 00
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCc-eeEEEEEcCCchHHHHH
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSM-GLVCFRLKGDNDLTNQL 300 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~-~~v~f~~~~~~~~~~~l 300 (367)
.+-.+....+.+..+.|+.+.++++.+..++ + + +.+.. +- +..-... -++.+.+.. . ...+
T Consensus 254 -----~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~---~---l-~~l~~-~~--v~~vRG~Gl~~gve~~~-~--~~~i 315 (364)
T PRK04013 254 -----STFGGNPLACKAVAVTLRILRRERLVEKAGE---K---F-IEIKG-ER--VVTTRGRGLMIGIVLKK-P--VGKY 315 (364)
T ss_pred -----CCCCcCHHHHHHHHHHHHHHHhccHHHHHHH---H---H-HHhcc-Cc--ceeeeeCcEEEEEEeCC-c--HHHH
Confidence 0001122233455556666666554443332 2 2 22222 21 1111222 233344432 1 4568
Q ss_pred HHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 301 YERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 301 ~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+.+.++|.+ +.+ .+...+|+.+ ....+++|++.+++.|++.++++
T Consensus 316 ~~~~~~~Gll-~~~---~g~~vlr~~P-pl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 316 VEELQNRGYL-VHT---AGQRVIRLLP-PLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHhCCcE-Eee---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHHHHH
Confidence 8888888854 332 2446899965 56778999999999999998765
No 368
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.85 E-value=3e-07 Score=84.20 Aligned_cols=274 Identities=18% Similarity=0.208 Sum_probs=158.6
Q ss_pred ceEEEecCCcchhHHHH-HHhCCcceEEEecC----------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 30 RLVAYASDQSNSSVEKS-AIIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~-~~~~g~~v~~v~~~----------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
.++++ ++.|+..-++ .+..|+.++-++.+ -.|.+|++.|++.|++... ...|.++..+..++.-|+
T Consensus 125 ~~~~~--sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQ 201 (471)
T COG3033 125 KMVAF--SNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQ 201 (471)
T ss_pred ccccc--ccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCC
Confidence 45554 3677776554 55678877766653 2478999999999998764 334666666666676776
Q ss_pred c---CChhhHHHHHhhcCcEEEEeccccc-ccccCh----hhh-----hhh-CCCCCcceeeeccccccccCCcceeEEE
Q psy3048 99 F---DNLEELGPICQEYNIWLHVDAAYAG-SALLLP----EYA-----HLK-RGLEYVDSFAFNAHKWLLTNHDCSAMWV 164 (367)
Q Consensus 99 i---~dl~~I~~l~~~~gi~l~vD~a~~~-~~~~~~----~~~-----~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~~ 164 (367)
- ..++++.+||++|+++++.|+|.-+ ..++.. .++ ... .-++.+|-++.|+.|=..++.| |++.+
T Consensus 202 pVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~ 280 (471)
T COG3033 202 PVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCF 280 (471)
T ss_pred cchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEe
Confidence 4 7889999999999999999997532 112221 111 100 1136899999999999887754 67778
Q ss_pred ecchhhhhhccCCc-cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHH
Q psy3048 165 KNANHLTNTFFTDR-VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTL 243 (367)
Q Consensus 165 ~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (367)
+++..+.-...... .-+..+ .+.| | .+ .++.. -++...|
T Consensus 281 ~D~~~fDvy~~~~~~~V~~eG-------~~tY-----------------------G-------gl-~Grdm--ealAvGL 320 (471)
T COG3033 281 KDDSFFDVYEECRTLVVVQEG-------FPTY-----------------------G-------GL-AGRDM--EALAVGL 320 (471)
T ss_pred cCccHHHHHHHHHhheEeecc-------cccc-----------------------C-------cc-cchhH--HHHHHHH
Confidence 77753210000000 001111 1111 0 00 01111 1222222
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcC----C--chH-HHHHHHHHhccCcE-EEEEe
Q psy3048 244 RSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKG----D--NDL-TNQLYERLMSHKQI-YIIKA 315 (367)
Q Consensus 244 ~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~----~--~~~-~~~l~~~L~~~g~~-~~~~~ 315 (367)
..-- -...+++..+..+||.+.|.+. |+.+..|..-+.+.+.... . +.. .+.+.-.|..++.+ .+.-+
T Consensus 321 ~e~~---~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG 396 (471)
T COG3033 321 REGV---NFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELG 396 (471)
T ss_pred HHhc---CcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeee
Confidence 2211 1334556677789999999987 8887777655555553211 1 111 23444455444322 22111
Q ss_pred EE-------------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 316 SF-------------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 316 ~~-------------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+ ..-..+|+++....-|.+.+|.++++++++.++-
T Consensus 397 ~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 397 SFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred ceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 11 1124799987555456899999999999998764
No 369
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.83 E-value=5.9e-07 Score=88.18 Aligned_cols=216 Identities=13% Similarity=0.057 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC-
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE- 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~- 140 (367)
+++.|++++++.. .....|++.-.....|.+.| +++|.++|++||+++++|+.+.++.....-+.....++.
T Consensus 237 ~l~~l~~~l~~~~---~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~ 313 (464)
T TIGR00699 237 CLEEVEDLIKKWH---KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDD 313 (464)
T ss_pred HHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCC
Confidence 3566777775321 22455666655566688888 999999999999999999999765432222222223453
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
+.|++++ -|.+++ .|++ +.. +.+. ...+.+..
T Consensus 314 ~PDi~t~--gK~lg~---gG~~-~~~-~~~~---~~~~~~~~-------------------------------------- 345 (464)
T TIGR00699 314 PPDMVTF--SKKFQT---AGYF-FHD-PAFR---PNKPYRQF-------------------------------------- 345 (464)
T ss_pred CCCEEEe--hhhhcc---CCcc-ccc-hhcc---CCCCcccc--------------------------------------
Confidence 4788666 576631 2322 211 1110 00000000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeE-EeCC----CCceeEEEEEcCCc
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFE-LVCP----PSMGLVCFRLKGDN 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~-~~~~----~~~~~v~f~~~~~~ 294 (367)
++-.+....+....+.|+.+..+ +..++..++.++|.++|+++. .+. ++.. ....++.+.++. .
T Consensus 346 ------~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~-~ 415 (464)
T TIGR00699 346 ------NTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD-E 415 (464)
T ss_pred ------cCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC-H
Confidence 00011112223334455555443 344566666777777775531 122 1111 233444555543 2
Q ss_pred hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 295 DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 295 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.....+.+.+.++|.+ +.+ .+...+|+++ ....+++|||.++++|++.
T Consensus 416 ~~~~~i~~~~~~~Gvl-~~~---~g~~~ir~~P-pl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 416 AKRDKLLKKARNNGVN-IGG---CGVKAIRLRP-MLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHHHHHHCCcE-Eec---CCCCeEEEeC-CCCCCHHHHHHHHHHHHHh
Confidence 3456788889999954 432 2446899965 5677899999999999875
No 370
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.82 E-value=2.5e-07 Score=85.69 Aligned_cols=264 Identities=16% Similarity=0.165 Sum_probs=162.0
Q ss_pred cCceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CCh
Q psy3048 28 KSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNL 102 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl 102 (367)
.++-.|++|+.+..-........|.+++..|.- ++..+|.+.+.+.|+...+. -+++....++||||.- +.+
T Consensus 118 ~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW 194 (396)
T COG1448 118 FPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQW 194 (396)
T ss_pred CCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCC---CEEEEecCCCCCCCCCCCHHHH
Confidence 346679999988887777777889999998873 45669999999999876542 2556666688999975 678
Q ss_pred hhHHHHHhhcCcEEEEecccccccccCh--hhhhhhC-CCCCcceeeeccccccccC-CcceeEEE--ecchhhhhhccC
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKR-GLEYVDSFAFNAHKWLLTN-HDCSAMWV--KNANHLTNTFFT 176 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~-~~~~~D~~~~~~hK~l~~p-~g~g~l~~--~~~~~~~~~~~~ 176 (367)
.+|.++.++.|..-++|-||-++.--.+ .+.-+.- .....=+++.|..|.|+.- -.+|.+.+ .+.+...+.++.
T Consensus 195 ~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sq 274 (396)
T COG1448 195 QELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ 274 (396)
T ss_pred HHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHH
Confidence 9999999999999999999866433222 1111100 0011145666789988754 23444333 333333332211
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
-+.-+...- +..+.+ |+. -+..+--...|+....+.+..+..
T Consensus 275 lk~~iR~~y----SnPP~~-----------------------Ga~-----------vva~IL~~p~Lra~W~~El~~Mr~ 316 (396)
T COG1448 275 LKAIIRTNY----SNPPAH-----------------------GAA-----------VVATILNNPELRAEWEQELEEMRQ 316 (396)
T ss_pred HHHHHHhcc----CCCchh-----------------------hHH-----------HHHHHhCCHHHHHHHHHHHHHHHH
Confidence 111111110 011111 000 000000012345555666788888
Q ss_pred HHHHHHHHHHHHhcCC-C--CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCC
Q psy3048 257 KHISLAKKFADLVEKD-D--RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETN 333 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~-~--g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~ 333 (367)
|..++++.|.+.|+.. + .|..+ ..+.++++|. ..+.+-.++|.++..+|...+ | |+++. ..+
T Consensus 317 Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~-----Gls~~QV~rLree~~IY~v~s---G----Ri~va--Gl~ 381 (396)
T COG1448 317 RILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYT-----GLSPEQVDRLREEFGIYLVAS---G----RINVA--GLN 381 (396)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecC-----CCCHHHHHHHHHhccEEEecC---C----eeeec--cCC
Confidence 9999999999999873 2 24443 3466777663 335677778888877776422 2 77653 346
Q ss_pred HHHHHHHHHHHHHH
Q psy3048 334 QCDVAFAWNEISHQ 347 (367)
Q Consensus 334 ~edid~li~~l~~~ 347 (367)
+..|+++.++|.++
T Consensus 382 ~~ni~~va~ai~~v 395 (396)
T COG1448 382 TSNIDYVAKAIAAV 395 (396)
T ss_pred hhhHHHHHHHHHhh
Confidence 88899999998875
No 371
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.80 E-value=7.5e-06 Score=80.76 Aligned_cols=210 Identities=15% Similarity=0.063 Sum_probs=111.5
Q ss_pred EEEEEecCCCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 85 CCLVATLGTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
..|++.-.....|.+- -+++|.++|++||+++++|+.+.++......+.....++ ..|++ +..|.+.....+|
T Consensus 221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig 297 (451)
T PRK06918 221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPIS 297 (451)
T ss_pred EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccE
Confidence 3444443333335432 288999999999999999999876644322111111122 24744 5688888777788
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++.+.+ ... .+. ... .. .+-.+..+.+....
T Consensus 298 ~v~~~~~-i~~-~~~--~~~--~~------------------------------------------~T~~g~~l~~aaa~ 329 (451)
T PRK06918 298 GVIGRKE-IMD-ESA--PGE--LG------------------------------------------GTYAGSPLGCAAAL 329 (451)
T ss_pred EEEEcHH-HHh-ccC--CCC--cC------------------------------------------cCCCcCHHHHHHHH
Confidence 8887532 221 111 000 00 00011112223333
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEc-C------CchHHHHHHHHHhccCc
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLK-G------DNDLTNQLYERLMSHKQ 309 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~-~------~~~~~~~l~~~L~~~g~ 309 (367)
+.++.+..+.+ .++..++.+++.++|+++ +.+.-+.. .-.+..+.+. + .......+.+.+.++|.
T Consensus 330 a~l~~i~~~~~---~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg-~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gv 405 (451)
T PRK06918 330 AVLDIIEKENL---NDRAIELGKVVMNRFEEMKNKYNCIGDVRG-LGAMCAFELVQDRKTKEPDKTLTANICKEANKRGL 405 (451)
T ss_pred HHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHhhCCCceeecc-ceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCe
Confidence 44554433333 344555566666666543 21111111 2222333331 1 12234567777888885
Q ss_pred EEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 310 IYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 310 ~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. +.+....+ .++|++++ ...++++|+.++++|++.++++.
T Consensus 406 l-v~~~~~~~-~~lrl~p~-l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 406 L-LLSAGTYG-NVIRVLMP-LVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred E-EeecCCCC-CEEEEECC-CccCHHHHHHHHHHHHHHHHHHH
Confidence 4 43322112 58999653 33679999999999999988764
No 372
>KOG0633|consensus
Probab=98.79 E-value=2.5e-07 Score=81.16 Aligned_cols=253 Identities=13% Similarity=0.069 Sum_probs=138.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+..|+....++.-..-.+.+.+++|+.+|.+.++.++++++.+.++.+.+ ++++.++++.|++|.+-..+.|-++.
T Consensus 111 keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiL 186 (375)
T KOG0633|consen 111 KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDILKIL 186 (375)
T ss_pred ccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHHHHHH
Confidence 34444443333222223456899999999999999999999999987754 67999999999999986666666665
Q ss_pred hhc-CcEEEEecccccccccChhhhhhhCCCCCcceee-ecccccccc-CCcceeEEEecchhhhhhc-cCCccccccCC
Q psy3048 110 QEY-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFA-FNAHKWLLT-NHDCSAMWVKNANHLTNTF-FTDRVYLKHTD 185 (367)
Q Consensus 110 ~~~-gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l~~-p~g~g~l~~~~~~~~~~~~-~~~~~yl~~~~ 185 (367)
+.. +..++||+||=-+.......++ +. ++-..++ -...|-++. +...|+-++ ...+...+ ...++|--+
T Consensus 187 e~p~nglVVvDEAYidFsg~~S~~~l-V~--kYpNLivlqTlSKsfGLAGiRvG~~~~--~~~ia~iln~~KaPYNiS-- 259 (375)
T KOG0633|consen 187 EMPDNGLVVVDEAYIDFSGVESRMKL-VK--KYPNLIVLQTLSKSFGLAGIRVGYGAF--PLSIAEILNRAKAPYNIS-- 259 (375)
T ss_pred hCCCCcEEEEeeeeEeeccccccchH-hH--hCCceeehhhhhhhcCcceeEeecccc--cHHHHHHHHhccCCcccc--
Confidence 543 7899999997322211111110 00 1112222 223454432 122333222 11121111 111222100
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---HHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG---LKGLQAYLRKHISLA 262 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~g~~~~~~~~~~la 262 (367)
...-.++|+.+. .+-++....-..+-.
T Consensus 260 --------------------------------------------------~~~s~~AL~Als~~n~kkme~~rdaiv~er 289 (375)
T KOG0633|consen 260 --------------------------------------------------VAGSVAALAALSDSNGKKMEDVRDAIVRER 289 (375)
T ss_pred --------------------------------------------------chhHHHHHHhcCcccchHHHHHHHHHHHHH
Confidence 011122233322 223444444455666
Q ss_pred HHHHHHhcCCCCeEE-eCCCCceeEEEEEcC-CchHHHHHHHHHhccCcEEEEE-eEEC-CeeEEEEEecCCCCCHHHHH
Q psy3048 263 KKFADLVEKDDRFEL-VCPPSMGLVCFRLKG-DNDLTNQLYERLMSHKQIYIIK-ASFQ-GRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~-~~~~~~~~v~f~~~~-~~~~~~~l~~~L~~~g~~~~~~-~~~~-~~~~lRi~~~~~~~~~edid 338 (367)
.++...|..++++.= +++...+.+..++.+ ++..++.++..+..+-.+.+.. +.-. -.+++||++. ++|+-+
T Consensus 290 ~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~Eent 365 (375)
T KOG0633|consen 290 ERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENT 365 (375)
T ss_pred HHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----Ccccch
Confidence 778888888876652 334566777777654 3455556665555443343332 2222 3679999764 467778
Q ss_pred HHHHHHHHH
Q psy3048 339 FAWNEISHQ 347 (367)
Q Consensus 339 ~li~~l~~~ 347 (367)
-+++.|++.
T Consensus 366 vL~k~~K~~ 374 (375)
T KOG0633|consen 366 VLMKCLKQF 374 (375)
T ss_pred HHHHHHHhh
Confidence 888888765
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.79 E-value=2.2e-06 Score=82.30 Aligned_cols=284 Identities=13% Similarity=0.094 Sum_probs=145.6
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCce-EEEecCCcchhHHHHHHhCCc-------------ceEEEecCC------
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRL-VAYASDQSNSSVEKSAIIGDV-------------PVRQLRSDD------ 61 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~~~~~~g~-------------~v~~v~~~~------ 61 (367)
+||++|++|+..+-+ .++. .|=.....|=+...++...|. .+..++...
T Consensus 120 tAlKma~qY~~~~G~-----------p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~ 188 (449)
T COG0161 120 TALKMALQYWRARGQ-----------PQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGF 188 (449)
T ss_pred HHHHHHHHHHHhcCC-----------CcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCC
Confidence 689999999996621 2233 333344455555555544441 222333321
Q ss_pred CCC------cCHHHHHHHHHHHhhCCCccEEEEEecCCCc-ccccC----ChhhHHHHHhhcCcEEEEecccccccccCh
Q psy3048 62 NGV------LRGDALLTAVKEDLAKGLIPCCLVATLGTTG-TCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLP 130 (367)
Q Consensus 62 ~~~------~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~-~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~ 130 (367)
++. -..++|++.+.+... .....+++--..-. .|.+- =+++|.+||++||++++.|+.-.++.....
T Consensus 189 ~~~~~~~~~~~a~~le~~i~~~g~--~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~ 266 (449)
T COG0161 189 FGEGDEEFAEAADELEALILEHGP--ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK 266 (449)
T ss_pred CCCChHHHHHHHHHHHHHHHhcCc--ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch
Confidence 111 224556666655321 22233333322222 45553 379999999999999999997655443322
Q ss_pred hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCC-ccccccCCCCCCCCCCCchhhhhhcccCCCc
Q psy3048 131 EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTD-RVYLKHTDAPMNTQSPDYTVMNWLGKALGLP 208 (367)
Q Consensus 131 ~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (367)
.+.....++ ..|+++.+ |.+.+. ...|.+++.+. +-+.+... ..-+.++
T Consensus 267 ~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~--I~~~~~~~~~~~f~HG------------------------ 317 (449)
T COG0161 267 MFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDR--IYEAFSDGDAGAFMHG------------------------ 317 (449)
T ss_pred hhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHH--HHHHHhcccCCeeccC------------------------
Confidence 222111233 34877664 666544 23555555432 22222111 1111111
Q ss_pred chhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEeCC-CCceeE
Q psy3048 209 EEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK-DDRFELVCP-PSMGLV 286 (367)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~-~~g~~~~~~-~~~~~v 286 (367)
++..+ ....+....+.|+.+.+++ +.++..++..++.++|++ +++...+.+ ...+.+
T Consensus 318 -----------------~TYsg-hPlacAaAla~L~i~e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli 376 (449)
T COG0161 318 -----------------HTYSG-NPLACAAALANLDILEEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI 376 (449)
T ss_pred -----------------Ccccc-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence 11111 1111223334444444444 445667888888888876 433223322 233333
Q ss_pred -EEEEcCC--------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 287 -CFRLKGD--------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 287 -~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
.+.+..+ ......+.++..++|. ++.|. |. .+=+++ ..-.|++|||++++.+++.+++....
T Consensus 377 ~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl-~iRp~---g~-~i~~~P-Pliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 377 GAIELVADKATKTPFEARVGARVRAAALERGL-LIRPL---GD-VIYLMP-PLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred EEEEEecccccccchhhhHHHHHHHHHHHCCe-EEeec---CC-EEEEcC-CccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 3333221 1234577888888984 45443 32 344433 34578999999999999999876543
No 374
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.76 E-value=7.7e-07 Score=84.54 Aligned_cols=235 Identities=14% Similarity=0.079 Sum_probs=127.6
Q ss_pred eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccC
Q psy3048 54 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLL 129 (367)
Q Consensus 54 v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~ 129 (367)
+..++.+ |++.+++++++... ...+|++.-.....|.+.| ++++.++|++||+.+|.|+...++-...
T Consensus 179 ti~~~yN-----D~~al~~~~~~~g~---~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~ 250 (432)
T COG0001 179 TLVLPYN-----DLEALEEAFEEYGD---DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL 250 (432)
T ss_pred EEEecCC-----CHHHHHHHHHHcCC---cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC
Confidence 4555555 99999999987643 2456666666666788754 6889999999999999999887654432
Q ss_pred hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcc
Q psy3048 130 PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPE 209 (367)
Q Consensus 130 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (367)
.- .+..-++ ..|..++ -|.+++..-+|++-.+. +..+......+-|...
T Consensus 251 gG-aq~~~gi-~PDlttl--GKiIGGGlP~ga~gGr~-eiM~~~~p~g~vyqaG-------------------------- 299 (432)
T COG0001 251 GG-AQGYYGV-EPDLTTL--GKIIGGGLPIGAFGGRA-EIMEQLAPLGPVYQAG-------------------------- 299 (432)
T ss_pred cc-cccccCc-Ccchhhh--hhhhcCCcceeeeccHH-HHHhhhCCCCCccccC--------------------------
Confidence 11 1111223 3465444 58887766677765543 2222111111111111
Q ss_pred hhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HH-HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEE
Q psy3048 210 EFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KG-LQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVC 287 (367)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~ 287 (367)
+-+ ++...+.+..+.+..+.. ++ ++.+.+....|.+-+.+.+.+. |+.......-+++.
T Consensus 300 ------T~s------------gnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~ 360 (432)
T COG0001 300 ------TLS------------GNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFG 360 (432)
T ss_pred ------CCC------------CcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEE
Confidence 000 111223444455555443 23 4433333334444444444443 55443322223333
Q ss_pred EEEcCC------------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 288 FRLKGD------------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 288 f~~~~~------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+.+... .+....+.+.|+++| +++.|+.++.. +.+.-.+++|||+.+++++++.+++..
T Consensus 361 i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~G-V~l~ps~~ea~------flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 361 IFFTEEGVRNYADAKRSDVERFAKFFHHLLNRG-VYLAPSQFEAG------FLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred EEecCCCCCCHHHHHhhchHHHHHHHHHHHhCC-cccCCccccce------eeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 333221 112235566788888 56776654432 122334799999999999998887653
No 375
>KOG1402|consensus
Probab=98.76 E-value=2.4e-06 Score=77.44 Aligned_cols=222 Identities=15% Similarity=0.167 Sum_probs=124.6
Q ss_pred eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC----ChhhHHHHHhhcCcEEEEeccccccccc-
Q psy3048 54 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALL- 128 (367)
Q Consensus 54 v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~- 128 (367)
+..|+.+ |.++|+.++++.- ...+++.-..-..|++- -++++.++|.+|+++++.|+.|.+....
T Consensus 188 ~~~v~Y~-----d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG 257 (427)
T KOG1402|consen 188 VDKVPYG-----DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG 257 (427)
T ss_pred ceeeccC-----CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC
Confidence 5556654 8899999997622 13444444455667763 3789999999999999999998764432
Q ss_pred ---ChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhccc
Q psy3048 129 ---LPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKA 204 (367)
Q Consensus 129 ---~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 204 (367)
.-.+.. + +.|++.+. |.|.+. +..+.+++.+.-.+ .+. ++.. + .-|
T Consensus 258 k~la~d~en----v-~PDivilg--KalSGG~~Pvsavl~~~~im~----~~~-----pgeH---g--sTy--------- 307 (427)
T KOG1402|consen 258 KLLACDYEN----V-RPDIVILG--KALSGGVYPVSAVLADDDIML----NIK-----PGEH---G--STY--------- 307 (427)
T ss_pred cEEEeehhh----c-CCCeEEEe--ccccCCeeeeEEEEecHHHHh----ccC-----CCcc---c--ccc---------
Confidence 112211 1 23665543 555433 23344444222111 111 1111 0 000
Q ss_pred CCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCC-eE-EeCC-C
Q psy3048 205 LGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDR-FE-LVCP-P 281 (367)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g-~~-~~~~-~ 281 (367)
++ ..++..+++..+.----+++.++...+...|+++|.+++. |. ++.. .
T Consensus 308 -------------------------gg---NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR 359 (427)
T KOG1402|consen 308 -------------------------GG---NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR 359 (427)
T ss_pred -------------------------CC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheee
Confidence 01 1234444444443334467788999999999999988752 21 1111 1
Q ss_pred ---CceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 282 ---SMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 282 ---~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
-++.+.|.....+ ...-+++-+|.+.|. +....+ + ..+|+++ ..-.+++|++.-++++++.+
T Consensus 360 GrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~--LAkptH-~-~IiRfaP-PL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 360 GRGLLNAIVINPSKTSGQDAWDVCLALKENGL--LAKPTH-G-NIIRFAP-PLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred ccceEEEEEeccccccchhHHHHHHccccccc--ccCCCC-C-CeEEecC-CcccCHHHHHHHHHHHHHHh
Confidence 2333344322212 333467767777773 332222 2 3899965 46678999999999998865
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.60 E-value=4.5e-07 Score=85.19 Aligned_cols=120 Identities=17% Similarity=0.050 Sum_probs=87.0
Q ss_pred CcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc--CChhhHHHHHhhcCcE
Q psy3048 38 QSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF--DNLEELGPICQEYNIW 115 (367)
Q Consensus 38 ~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i--~dl~~I~~l~~~~gi~ 115 (367)
-.|+.+...++..|+++++|-. ..+-...+++.+|.++++ ++.-++.++. |.. -++++++++||++|++
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG~--tn~t~~~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lp 189 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVGT--TNRTHLKDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLP 189 (395)
T ss_pred CCCCChhHHHHHcCCEEEEecc--cCcCCHHHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCC
Confidence 5889999999999999998863 355688999999999985 5555555543 544 3678899999999999
Q ss_pred EEEecccccccccCh-hhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhh
Q psy3048 116 LHVDAAYAGSALLLP-EYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT 171 (367)
Q Consensus 116 l~vD~a~~~~~~~~~-~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~ 171 (367)
+++|.+.|...-.-+ ....... .+|.+++|++|.|++|. .|++.-+ ++.+.
T Consensus 190 vivD~aSg~~v~~e~~l~~~la~---GaDLV~~SgdKllgGPq-aGii~Gk-KelI~ 241 (395)
T COG1921 190 VIVDLASGALVDKEPDLREALAL---GADLVSFSGDKLLGGPQ-AGIIVGK-KELIE 241 (395)
T ss_pred EEEecCCccccccccchhHHHhc---CCCEEEEecchhcCCCc-cceEech-HHHHH
Confidence 999998765311111 1111122 45999999999999885 6666654 44443
No 377
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.57 E-value=8.3e-06 Score=79.92 Aligned_cols=93 Identities=19% Similarity=0.140 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCccee
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSF 145 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 145 (367)
|+++|++++++.. ....+|++.......+...++++|.++|++||+++++|++|.++.... .......++ ..|++
T Consensus 173 d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv-~PDi~ 247 (431)
T PRK06209 173 DIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-RGAQKLYGI-VPDLS 247 (431)
T ss_pred CHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-chhhHHhCC-Cccee
Confidence 7899999986432 123344443332222333459999999999999999999996543321 001111133 35765
Q ss_pred eeccccccccCCcceeEEEe
Q psy3048 146 AFNAHKWLLTNHDCSAMWVK 165 (367)
Q Consensus 146 ~~~~hK~l~~p~g~g~l~~~ 165 (367)
++ -|.+++....|.+..+
T Consensus 248 t~--gK~lggG~p~~av~~~ 265 (431)
T PRK06209 248 CF--GKALGNGFAVSALAGK 265 (431)
T ss_pred ee--hhhhcCCcccEEEEEH
Confidence 54 6888765446666664
No 378
>PRK07046 aminotransferase; Validated
Probab=98.51 E-value=2.1e-05 Score=77.48 Aligned_cols=225 Identities=14% Similarity=0.035 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|++++++.+... ...+|++.-.....|.+.| ++++.++|++||+++++|+.+....-+.... ...++ .
T Consensus 206 d~~~l~~~l~~~-----~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~--~~~gv-~ 277 (453)
T PRK07046 206 DLAALEAALADG-----DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT--RAHGL-E 277 (453)
T ss_pred CHHHHHHHhCCC-----CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh--HHhCC-C
Confidence 889999888421 1345555544445566654 7999999999999999999985100011111 11244 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|.+++ -|.+++...+|++..+++ ... .+.. +-..... . .+ .
T Consensus 278 PDi~t~--gK~lggG~Pi~av~g~~~-i~~-~~~~---~~~~~~~---~---~~--------------------~----- 319 (453)
T PRK07046 278 PDFLVV--GKPIAGGVPCAVYGFSAE-LAE-RAQA---AKASAPP---G---HS--------------------G----- 319 (453)
T ss_pred ccceee--hhhhcCCCcceeeeehHH-HHH-HHhh---ccccCCC---C---Cc--------------------e-----
Confidence 588765 688887767888777543 221 1110 0000000 0 00 0
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCe--EEeCCCCceeEEEEEcCC---
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRF--ELVCPPSMGLVCFRLKGD--- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~--~~~~~~~~~~v~f~~~~~--- 293 (367)
...+. .+....+.+..+.|+.+..+ +..++..++.++|.++|+++ -++ .+..... ++.+.+...
T Consensus 320 --~~~T~-~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~--~~~i~~~~~~~~ 391 (453)
T PRK07046 320 --IGTTL-SANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGA--RVEFQFAPTPPR 391 (453)
T ss_pred --eCCCC-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc--EEEEEEeCCCCC
Confidence 00000 11112233334445444332 34556667777777776542 122 2222222 222322110
Q ss_pred ----------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 ----------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 ----------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
......+...+.++|.+ +.+. + ..++++.. .+++|||++++++++.++++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~Gv~-~~~~---~-~~~~~~p~---~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 392 NGAEAAAALDPELEAALHLYLLNRGVL-ITPF---H-NMMLVCPA---TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred CHHHHhcccCHHHHHHHHHHHHHCCCE-Eecc---c-CcEEEeCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 11234566677888854 4331 2 35677542 589999999999999987653
No 379
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.46 E-value=8.4e-06 Score=75.36 Aligned_cols=208 Identities=16% Similarity=0.062 Sum_probs=131.3
Q ss_pred EEEEecCCCcccccCC-hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEE
Q psy3048 86 CLVATLGTTGTCAFDN-LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWV 164 (367)
Q Consensus 86 ~vv~~~~~t~~G~i~d-l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~ 164 (367)
.|.+++..|.+|+--| ...+.. +..+++|.+.+++....| +++.|++.++.+|.++ |.|.+++++
T Consensus 147 yv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIv 212 (365)
T COG1932 147 YVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIV 212 (365)
T ss_pred EEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEE
Confidence 6888988898897633 222221 178999998877766543 3455999999999997 778888888
Q ss_pred ecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH---H
Q psy3048 165 KNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW---M 241 (367)
Q Consensus 165 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 241 (367)
+. ..+.+.-+..-+-++ +|+...- .+-+.. ++ ..+.++ .
T Consensus 213 r~-~~l~r~~~~~~P~if-----------~y~~~~~-----------------------~~s~yN-TP--ptfa~y~~~l 254 (365)
T COG1932 213 RP-DLLERAESYTLPSIF-----------DYLTHAD-----------------------NGSMYN-TP--PTFAWYLLGL 254 (365)
T ss_pred cH-HHHhcccccCCchHh-----------hchhhhc-----------------------cCCccC-Cc--HHHHHHHHHH
Confidence 64 445443222101010 1100000 000100 11 112222 2
Q ss_pred HHHHh-hHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--C--CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE
Q psy3048 242 TLRSY-GLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--P--PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS 316 (367)
Q Consensus 242 ~l~~~-~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~--~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 316 (367)
.++.+ ...|++.+.++..+.++.|++.+.+. +|.... + .....|+|.+.. .+..+.+.+.+.++|.++..+
T Consensus 255 v~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~~-~~ld~~fv~eae~~gl~~lkG-- 330 (365)
T COG1932 255 VFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLVD-AELDKGFVAEAEAAGLIYLKG-- 330 (365)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcCc-HHHHHHHHHHHHHcCCceecc--
Confidence 33333 34479999999999999999999886 554322 2 245678888875 667788888899898666543
Q ss_pred ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 317 FQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 317 ~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
++-.+.+|+++ ..-...+|++.|++.++.+.++
T Consensus 331 hr~vgGmRasi-ynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 331 HRSVGGLRASI-YNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ccCCCceeeee-ecCCCHHHHHHHHHHHHHHHHh
Confidence 33334599975 4556789999999999988664
No 380
>KOG1404|consensus
Probab=98.42 E-value=3.1e-05 Score=72.00 Aligned_cols=205 Identities=10% Similarity=0.038 Sum_probs=117.3
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
+..++.......-|.+.+ +++..++|+++|..++.|+++.++.....-+.+.-.++ ..|+++. -|.++...-.
T Consensus 213 vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v-~PDIvTm--AKgiGnG~Pl 289 (442)
T KOG1404|consen 213 VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGV-VPDIVTM--AKGIGNGFPL 289 (442)
T ss_pred eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCC-CccHHHH--HhhccCCCcc
Confidence 344555545455567654 68999999999999999999988665432211111122 2355443 5777777778
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|.+++..+ +.+.+.....|.+.- .+........
T Consensus 290 ~AVvtt~E--Ia~v~~~~~~~fnTy---------------------------------------------ggnP~a~avg 322 (442)
T KOG1404|consen 290 GAVVTTPE--IADVLNQKSSHFNTY---------------------------------------------GGNPVACAVG 322 (442)
T ss_pred eeeecCHH--HHHHHHhcccccccc---------------------------------------------CCCchhHHHH
Confidence 88887432 333332221121111 0111111222
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEeCCC-Ccee-EEEEEcC--------CchHHHHHHHHHhccC
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD-DRFELVCPP-SMGL-VCFRLKG--------DNDLTNQLYERLMSHK 308 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~-~g~~~~~~~-~~~~-v~f~~~~--------~~~~~~~l~~~L~~~g 308 (367)
.+.|..+. -+++.++..+...||.++|.++ ++.+++++- ..+. +-..+.. .......+.+...+.|
T Consensus 323 ~aVL~Vik---ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~G 399 (442)
T KOG1404|consen 323 LAVLKVIK---EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELG 399 (442)
T ss_pred HHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhC
Confidence 33344333 3667788999999999999886 346666542 2221 1122211 1223346667777777
Q ss_pred cEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 309 QIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 309 ~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
. .+..+...|. .+||++. .-.|++|||.+++..
T Consensus 400 v-lvg~g~i~G~-vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 400 V-LVGKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred e-eeecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence 4 4555555665 9999764 456799998877765
No 381
>KOG0258|consensus
Probab=98.37 E-value=0.00011 Score=68.34 Aligned_cols=78 Identities=23% Similarity=0.165 Sum_probs=64.7
Q ss_pred HHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhcCcEEEEecc
Q psy3048 47 AIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 47 ~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+..+|...+..-++ .+|.+|+++|++.+++.. ++-.|.+++++.|-|+||++ +.|++|..+|+++|+.++.|+.
T Consensus 178 i~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 178 ISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred HHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence 44566665555554 479999999999999887 67778888888899999998 7899999999999999999997
Q ss_pred cccc
Q psy3048 122 YAGS 125 (367)
Q Consensus 122 ~~~~ 125 (367)
|--.
T Consensus 257 YQ~N 260 (475)
T KOG0258|consen 257 YQDN 260 (475)
T ss_pred HHhh
Confidence 6443
No 382
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.31 E-value=0.00022 Score=66.79 Aligned_cols=276 Identities=13% Similarity=0.068 Sum_probs=143.5
Q ss_pred HHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEE
Q psy3048 7 AKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCC 86 (367)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~ 86 (367)
++.+...-..+..| |.+. +....+|+-.++--....++.+|++.+.||.+++|. |++.+|+.+.++.. ...+
T Consensus 105 ~~a~~~G~~~~~~P-W~~~---~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~~dGP-DmD~Ve~LV~~D~s---vKGi 176 (425)
T PF12897_consen 105 SRAMLHGVPGSETP-WCKE---EKVKFLCPVPGYDRHFAITEHFGIEMIPVPMTEDGP-DMDMVEELVAEDPS---VKGI 176 (425)
T ss_dssp HHHHHH--TT-SS--GGGS---S--EEEEEES--HHHHHHHHHCT-EEEEEEEETTEE--HHHHHHHTHTSTT---EEEE
T ss_pred HHHHhcCCCCCCCC-chhc---cCceEEecCCCchHHHHHHHhhCcEEEecCCCCCCC-CHHHHHHHHhcCCc---cceE
Confidence 33343333333334 6553 478899999898888888999999999999987775 99999999975542 1124
Q ss_pred EEEecCCCcccccCChhhHHHHH----hhcCcEEEEecccccccccCh--hhh-----hh--hCCCCCcceeeecccccc
Q psy3048 87 LVATLGTTGTCAFDNLEELGPIC----QEYNIWLHVDAAYAGSALLLP--EYA-----HL--KRGLEYVDSFAFNAHKWL 153 (367)
Q Consensus 87 vv~~~~~t~~G~i~dl~~I~~l~----~~~gi~l~vD~a~~~~~~~~~--~~~-----~~--~~~~~~~D~~~~~~hK~l 153 (367)
-++-.-+|++|....=+-+.+++ ...+..++.|.||+.+-+..+ ... .. ..|-.+--++..|..|.-
T Consensus 177 WcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT 256 (425)
T PF12897_consen 177 WCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT 256 (425)
T ss_dssp EE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS
T ss_pred EeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc
Confidence 44555578999996555555554 468999999999998877321 110 00 112112246667789988
Q ss_pred ccCCcceeEEEecchh--hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccc
Q psy3048 154 LTNHDCSAMWVKNANH--LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLS 231 (367)
Q Consensus 154 ~~p~g~g~l~~~~~~~--~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (367)
+...|++++.....+. +.+.+ .. +..+.
T Consensus 257 f~GaGva~~aaS~~Nl~~~~~~~-------~~-------------------------------------------~tIgp 286 (425)
T PF12897_consen 257 FPGAGVAFFAASEANLAWIKKHL-------SV-------------------------------------------QTIGP 286 (425)
T ss_dssp -TTSS-EEEEE-HHHHHHHHHHH-------HH-------------------------------------------H-S--
T ss_pred cCCcceeeeecCHHHHHHHHHHh-------cC-------------------------------------------ceeCc
Confidence 8777777777654331 11110 00 00011
Q ss_pred ccccHHHHHHHHHHh-hHH-HHHHHHHHHHHH--------HHHHHHHhc-CCCCeEEeCCC-CceeEEEEEcCCchHHHH
Q psy3048 232 RRFRALKLWMTLRSY-GLK-GLQAYLRKHISL--------AKKFADLVE-KDDRFELVCPP-SMGLVCFRLKGDNDLTNQ 299 (367)
Q Consensus 232 ~~~~~~~~~~~l~~~-~~~-g~~~~~~~~~~l--------a~~l~~~L~-~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~ 299 (367)
....+++- .+.+ ..+ |+++.++++.++ .+.|.++|. .. |+--+..| .-..|+|...+ ..+++
T Consensus 287 dKvNQLRH---vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~--G~Akr 360 (425)
T PF12897_consen 287 DKVNQLRH---VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLD--GTAKR 360 (425)
T ss_dssp -HHHHHHH---HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEEST--T-HHH
T ss_pred cHHHHHHH---HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCC--ChHHH
Confidence 11222332 3333 245 778777776654 345666666 33 45445544 44566777653 45678
Q ss_pred HHHHHhccCcEEEEEe--EE-----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 300 LYERLMSHKQIYIIKA--SF-----QGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 300 l~~~L~~~g~~~~~~~--~~-----~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
+.+...+.|+. +++. .+ .....||++++.+ +.+|++.+++.+--+++
T Consensus 361 vV~lakeAGV~-LT~AGAtfPyg~DP~D~nIRiAPS~P--~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 361 VVELAKEAGVA-LTPAGATFPYGKDPRDSNIRIAPSYP--SLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHHHHTTEE----TTTTSGGG--TTS-EEEE--SSS---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCce-eCCCCCCCCCCCCCCCCcEEecCCCC--CHHHHHHHHHHHHHHHH
Confidence 88877778844 4431 11 1245899977544 68999999988866544
No 383
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.28 E-value=0.00012 Score=76.44 Aligned_cols=226 Identities=15% Similarity=0.088 Sum_probs=119.4
Q ss_pred HHHHHHHHHHh--hCCCccEEEEEecC-CCcccccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 68 DALLTAVKEDL--AKGLIPCCLVATLG-TTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 68 ~~L~~~l~~~~--~~~~~~~~vv~~~~-~t~~G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
+.+++.|++.. ..+.....|++.-. ...-|.+. =+++|.++|++||+++|+|+.+.|+......+.....++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666665311 11222334444431 23346553 368999999999999999999987755443332222344
Q ss_pred CcceeeeccccccccCC-cceeEEEecchhhhhhccCC-c-cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTD-R-VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~-~-~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
..|+++++ |.+.+.+ -+|.++.+++ .. ..+... . ..+.++
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~-~~f~~~~~~~~~~hg--------------------------------- 688 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATEE-VF-EAFRGPSKLDALLHG--------------------------------- 688 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcHH-HH-HhhccccccCCcccC---------------------------------
Confidence 46887764 7777663 5777777543 22 222100 0 000000
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHh----cCCCCeEEeCCCCc-eeEEEEEc
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLV----EKDDRFELVCPPSM-GLVCFRLK 291 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~~~L----~~~~g~~~~~~~~~-~~v~f~~~ 291 (367)
.+. .+....+....+.|+.+..++ ++...++..++.+++.+.| .++|.+.=+ ... .+..+.+.
T Consensus 689 --------~Ty-~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V--Rg~Gl~~~iel~ 757 (817)
T PLN02974 689 --------HSY-TAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV--VSLGTVLALELD 757 (817)
T ss_pred --------CCC-CcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--EeeeeEEEEEEe
Confidence 000 111122344445566654442 3344455556656555544 344322111 112 22333332
Q ss_pred CC-------chHHHHHHHHHh-ccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 292 GD-------NDLTNQLYERLM-SHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 292 ~~-------~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
.+ ......+.+++. ++|. ++.+ .+ +.+|+ +..+.+++++++++++.|.+.+
T Consensus 758 ~~~~~~~~~~~~a~~v~~~~~~~~Gl-~~r~---~G-nvi~l-~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 758 AEGSGSGYSSLYARSVVRRLRREDGI-YARP---LG-NVVYL-MCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred cCCcccccchHHHHHHHHHHHHhCCE-EEEe---cC-CEEEE-eCCCCCCHHHHHHHHHHHHHHh
Confidence 21 123457788888 8884 3432 23 57888 4468889999999999998754
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.09 E-value=3.4e-06 Score=78.73 Aligned_cols=131 Identities=15% Similarity=0.068 Sum_probs=38.0
Q ss_pred ceEEEecCCcchh------HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc--ccc--
Q psy3048 30 RLVAYASDQSNSS------VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT--CAF-- 99 (367)
Q Consensus 30 ~~~v~~s~~~H~s------~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~--G~i-- 99 (367)
.-.|++|+-.-.. +.+.++..|+++++|-.. -+-.+++++++|.++|. ++.-.|.+|.. |..
T Consensus 85 ~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~ 156 (367)
T PF03841_consen 85 GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGE 156 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccc------cccccccccccccccccc
Confidence 3455556544442 344556679999988753 24478999999999984 66666666652 323
Q ss_pred CChhhHHHHHhhcCcEEEEecccccccccChhh----hhhhCC-C-CCcceeeeccccccccCCcceeEEEecchhhh
Q psy3048 100 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEY----AHLKRG-L-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT 171 (367)
Q Consensus 100 ~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~----~~~~~~-~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~ 171 (367)
-+++++++++|+||+++++|.+-|... ....+ .+.++. + ..+|.++||+-|.+++|. +|+++-+. +.+.
T Consensus 157 ~~~~el~~la~~~~lp~i~DlgsG~l~-dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk-~lI~ 231 (367)
T PF03841_consen 157 VSLEELAELAKEHGLPVIVDLGSGLLV-DLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK-ELIE 231 (367)
T ss_dssp ----HHHHHHHHHT--EEEE-TTHHHH-HHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH-HHHH
T ss_pred ccHHHHHHHHhhcCCcEEEECCCCCCc-CcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH-HHHH
Confidence 389999999999999999998765421 11000 111111 2 347999999999999875 68877654 4443
No 385
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.04 E-value=0.00059 Score=64.73 Aligned_cols=80 Identities=21% Similarity=0.170 Sum_probs=53.8
Q ss_pred EEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 85 CCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
..|++.-.....|.+ +=+++|.++|++||+++++|+.+.++.....-+.....++ ..|+++++ |.+.+....|
T Consensus 179 aavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~s 255 (339)
T PF00202_consen 179 AAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPIS 255 (339)
T ss_dssp EEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEE
T ss_pred EEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcc
Confidence 355555444444554 3369999999999999999999887643322222222344 46999996 9998887788
Q ss_pred eEEEecc
Q psy3048 161 AMWVKNA 167 (367)
Q Consensus 161 ~l~~~~~ 167 (367)
.++.+++
T Consensus 256 av~~~~~ 262 (339)
T PF00202_consen 256 AVLGSEE 262 (339)
T ss_dssp EEEEEHH
T ss_pred cccccch
Confidence 8888653
No 386
>KOG1401|consensus
Probab=97.96 E-value=0.0032 Score=59.30 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=83.9
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEE-----ecC--CCCCcCHHHHHHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQL-----RSD--DNGVLRGDALLTAV 74 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v-----~~~--~~~~~d~~~L~~~l 74 (367)
+||++||+....+.... +--+|.....-|=-...++...+..-... .++ ..-.-|+.+|++.+
T Consensus 131 ~ALK~Ark~~~~~~~~~----------~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~ 200 (433)
T KOG1401|consen 131 TALKFARKFTGKKHPEK----------KTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLF 200 (433)
T ss_pred HHHHHHHHhhcccCCcc----------ceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHH
Confidence 68899998887663211 11233334445544444444322211111 111 11122799999999
Q ss_pred HHHhhCCCccEEEEEecCCCccccc----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc
Q psy3048 75 KEDLAKGLIPCCLVATLGTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH 150 (367)
Q Consensus 75 ~~~~~~~~~~~~vv~~~~~t~~G~i----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h 150 (367)
+..+. . ...|++--..-.-|.+ +-+..|..+|+++|+.++.|+.+.++......+....-++ ..|++++ -
T Consensus 201 ~~h~~--~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~PDI~t~--a 274 (433)
T KOG1401|consen 201 ESHKG--E-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TPDITTV--A 274 (433)
T ss_pred HhCCC--c-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CCcceee--h
Confidence 87652 1 2234444333233333 3367899999999999999999877555443333322222 3476554 5
Q ss_pred cccccCCcceeEEEecc
Q psy3048 151 KWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 151 K~l~~p~g~g~l~~~~~ 167 (367)
|.|.+....|+..+++.
T Consensus 275 K~L~gGlPigA~~v~~k 291 (433)
T KOG1401|consen 275 KPLGGGLPIGATGVRDK 291 (433)
T ss_pred hhccCCceeEEEeehHH
Confidence 77777777888777653
No 387
>KOG1412|consensus
Probab=97.84 E-value=0.0015 Score=59.34 Aligned_cols=266 Identities=13% Similarity=0.172 Sum_probs=151.1
Q ss_pred CceEEEecCCcchhHHHHHHhCCc-ceEEEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CCh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDV-PVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNL 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~-~v~~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl 102 (367)
++-.||+|..+....+...+-.|. .+...+. .+...+|.+.+...|+..+.. .++++....+|+||.= +-.
T Consensus 124 ~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~---si~iLhaCAhNPTGmDPT~EQW 200 (410)
T KOG1412|consen 124 NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEG---SIIILHACAHNPTGMDPTREQW 200 (410)
T ss_pred ccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCC---cEEeeeccccCCCCCCCCHHHH
Confidence 355699999988888888887884 4554444 256788999999888776532 1233333347899953 567
Q ss_pred hhHHHHHhhcCcEEEEecccccccccC---hhhhhh---hCCCCCcceeeeccccccccC-Cccee--EEEecchhhhhh
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLL---PEYAHL---KRGLEYVDSFAFNAHKWLLTN-HDCSA--MWVKNANHLTNT 173 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~---~~~~~~---~~~~~~~D~~~~~~hK~l~~p-~g~g~--l~~~~~~~~~~~ 173 (367)
.+|+++.++.+...+.|-||-|+.-.. |.+..+ ..|+ -=+++-|..|.++.- ...|- ++.+++......
T Consensus 201 ~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~--e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v 278 (410)
T KOG1412|consen 201 KQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF--ELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGV 278 (410)
T ss_pred HHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC--eEEEEhhhhhhcccccccccceEEEecChhHHHHH
Confidence 899999999999999999986644321 221111 1222 125566678876643 23443 344444333221
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHH
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQA 253 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 253 (367)
.+.-.--+... . +..+.| ..+...+.+.+ -.++......+..
T Consensus 279 ~SQl~lviR~~-~---SNPPAy-GArIV~kvL~t---------------------------------P~lre~W~~sik~ 320 (410)
T KOG1412|consen 279 KSQLTLVIRSN-W---SNPPAY-GARIVHKVLST---------------------------------PELREQWIQSIKT 320 (410)
T ss_pred HHHHHHHHhhc-c---CCCcch-hhHHHHHHhcC---------------------------------HHHHHHHHHHHHH
Confidence 11100000000 0 111111 00000000000 1122333456677
Q ss_pred HHHHHHHHHHHHHHHhcCC--CCe-EEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCC
Q psy3048 254 YLRKHISLAKKFADLVEKD--DRF-ELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSP 330 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~--~g~-~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 330 (367)
+-.|..+++..|++.|..+ ||- +=+ ..+.++++|. .++....+.|+++..+|+-. .| ||+++ .
T Consensus 321 MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyT-----GLtp~qV~~li~~h~vyLl~---~G----RInis-G 386 (410)
T KOG1412|consen 321 MSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYT-----GLTPAQVDHLIENHKVYLLS---DG----RINIS-G 386 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceeec-----CCCHHHHHHHHHhceEEEec---CC----cEeee-c
Confidence 7778889999999998775 331 111 1367887773 33567778898888777642 22 45442 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~ 352 (367)
. +...++++..+|.+.+..+.
T Consensus 387 L-N~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 387 L-NMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred c-ccccHHHHHHHHHHHHHhhc
Confidence 2 45669999999988877654
No 388
>KOG2040|consensus
Probab=97.82 E-value=0.00019 Score=70.70 Aligned_cols=249 Identities=12% Similarity=0.067 Sum_probs=142.7
Q ss_pred ceEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.++++...|.-....++. +|++++.. |+++...-. ++ ...+++.+|.+ .|.+.|..++
T Consensus 205 rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~~~~~s~-~~------v~gvlvQYP~t-~G~i~d~~el 268 (1001)
T KOG2040|consen 205 RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIKEADYSS-KD------VSGVLVQYPDT-EGSVLDFDEL 268 (1001)
T ss_pred cceEEecCCCCcchhhhhhccccccceeEEec--------CHHHhhccc-cc------eeEEEEEcCCC-CCcccCHHHH
Confidence 34467788999988777653 34443322 222221111 11 23688888877 6999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCccee-----EEEecchhhhhhccCCccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSA-----MWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~-----l~~~~~~~~~~~~~~~~~y 180 (367)
++.+|+.|..+++-.-.-+.-++-++..+ .+|+.+.+++.+ +.|.|-|. +.++ +.+.+.
T Consensus 269 ~~~a~~~~s~vv~atDLLaLtiLrpPgef------GaDIavGSsQRF-GVPlGYGGPHAaFfAv~--~~l~R~------- 332 (1001)
T KOG2040|consen 269 VELAHANGSLVVMATDLLALTILRPPGEF------GADIAVGSSQRF-GVPLGYGGPHAAFFAVS--ESLVRM------- 332 (1001)
T ss_pred HHHhhccCceEEEeehhhHHHccCChhhc------Cceeeecccccc-CccccCCCchHHHHHHH--HHHHhh-------
Confidence 99999999876654322111222222222 359999999885 45655443 2221 112221
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcc-------ccccc----cccccccHHHHHHH-----HH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVI-------QHWQT----PLSRRFRALKLWMT-----LR 244 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~-----l~ 244 (367)
+|++.+..+.+..+..+ ++.+. +.++-..+-++.+- .-
T Consensus 333 --------------------------mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyai 386 (1001)
T KOG2040|consen 333 --------------------------MPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAI 386 (1001)
T ss_pred --------------------------CCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhh
Confidence 22222222222211100 00000 00110111111111 11
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEE
Q psy3048 245 SYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLR 324 (367)
Q Consensus 245 ~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 324 (367)
.+|.+|++++.++....+-+|...|+.. |-++.+.+.+-.+.+++.+ ..+++.++-.++++- + ..+. .+.+-
T Consensus 387 YHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI~~~~---s~~~~l~rA~~~~iN-l--r~~e-d~tig 458 (1001)
T KOG2040|consen 387 YHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKIRCGC---SAEEVLDRAAKRQIN-L--RLVE-DGTIG 458 (1001)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEEEecC---cHHHHHHHHHhhcCc-e--EEee-cCceE
Confidence 3599999999999999999999999986 6788877777777788764 256777777666632 1 1112 23455
Q ss_pred EEecCCCCCHHHHHHHHHHHH
Q psy3048 325 FVVTSPETNQCDVAFAWNEIS 345 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~ 345 (367)
+++ .-.++++|+|.++..+.
T Consensus 459 vsl-DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 459 VSL-DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred Eee-cccccHHHHHHHHHHHc
Confidence 554 56678999999999885
No 389
>KOG1405|consensus
Probab=97.66 E-value=0.004 Score=57.52 Aligned_cols=220 Identities=11% Similarity=0.069 Sum_probs=118.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccc----cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~----i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++++|+.|.+..++......+++.-..+.-|. -+=+..+.++|++||+.++||+.|.++.....-+.....+++.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 567788888776644322233444444444443 3557999999999999999999997765433222221223322
Q ss_pred -cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 -VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 -~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++| .|+.. |. ++.+.+.. ...+|. .-..|+|
T Consensus 334 PpD~vTFS-KK~q~-----gG-ffh~~~fr-----pn~pYr--------------ifNTWmG------------------ 369 (484)
T KOG1405|consen 334 PPDVVTFS-KKFQT-----GG-FFHDEEFR-----PNEPYR--------------IFNTWMG------------------ 369 (484)
T ss_pred Cccceehh-hhhhc-----Cc-cccCcccC-----CCchHH--------------HhhhhcC------------------
Confidence 4666653 34332 22 22222211 112221 0112322
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCC-CceeEEEEEcCCch
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPP-SMGLVCFRLKGDND 295 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~-~~~~v~f~~~~~~~ 295 (367)
-.+..+-+-..++.+.. +++.++.....++|..+|.++ ||. +-.-. .-+.+++.++. ..
T Consensus 370 -----------dP~k~lll~~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~~~~RGrGTF~a~d~ps-~~ 433 (484)
T KOG1405|consen 370 -----------DPSKNLLLEEVVQEIKR---EDLLNNVAHVGKALLKGLLELQAKYPGK-INNLRGRGTFIAWDCPS-GS 433 (484)
T ss_pred -----------ChHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHhCchh-hhcccccceEEEEeCCC-hH
Confidence 11223333444444444 344556677777777777553 331 11111 33455666654 44
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.-+.+...+..+|. .+++ .|...+|+-++ .-.++...+-+++.+.++++.
T Consensus 434 ~Rdk~i~~~~~nGv-~~GG---Cg~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 434 IRDKLILIARLNGV-NLGG---CGDKSIRFRPS-LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHHHHHHHcCc-eecc---cccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence 45677777888884 3321 23446777553 444688899999999988754
No 390
>KOG2790|consensus
Probab=97.62 E-value=0.0038 Score=56.00 Aligned_cols=258 Identities=12% Similarity=0.029 Sum_probs=145.2
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC-ChhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD-NLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~-dl~~I~~ 107 (367)
.|++..-+..+..++-++.-...+..+..+ +-..|++.++.. ++. ..|-.+...|..|+-. ++.
T Consensus 102 YiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~--~da------~yvyyCaNETVHGVEf~~~P---- 169 (370)
T KOG2790|consen 102 YVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN--PDA------SYVYYCANETVHGVEFDFIP---- 169 (370)
T ss_pred eEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccC--CCc------cEEEEecCceeeceecCCCC----
Confidence 344444555556666555433333333311 123455555432 121 3677777788888753 222
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+-.-+|..++.|-+.-...-+. +++.-+++.++.+|..+ |.|.-++++|+. .+.+.....|.-+.-...
T Consensus 170 ~~~~~~~vlVaDmSSnflSrpv--------Dvsk~gvi~aGAQKN~G-~aG~Tvvivr~d-llg~~~~~tP~v~dyk~~- 238 (370)
T KOG2790|consen 170 VNDPKGAVLVADMSSNFLSRPV--------DVSKFGVIFAGAQKNVG-PAGVTVVIVRKD-LLGNALDITPSVLDYKIM- 238 (370)
T ss_pred CCCCCCceEEEecccchhcCCc--------cchhcceEEeccccccC-ccccEEEEEehh-hhcccccCCccccceeee-
Confidence 2234678888896643332222 23444889999999987 778888888753 444443333322211110
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~l~ 266 (367)
....+ .|-+|+ -|....+...++.+. ..|++++.+...+.++.+.
T Consensus 239 --~~NnS---------lyNTpP-----------------------~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllY 284 (370)
T KOG2790|consen 239 --DKNNS---------LYNTPP-----------------------CFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLY 284 (370)
T ss_pred --ccccc---------cccCCC-----------------------eeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 00000 011110 011122233344433 3458888888889999999
Q ss_pred HHhcCCCCeEEeC-CC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVC-PP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~-~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|.+..||.... +| ....|.|++.. +++..++.+.-.+++-+.+ -.++.-+.+|.|+ .--.+-++++++++
T Consensus 285 d~iD~s~gfy~cpVe~~~RS~MNV~Fri~~-d~Le~eFLkeA~~~~mv~L--KGhRSVGGiRASl-YNAisv~~~q~L~~ 360 (370)
T KOG2790|consen 285 DAIDNSNGFYRCPVEPSVRSRMNVPFRIEK-DELEAEFLKEAAKEHMVQL--KGHRSVGGIRASL-YNAISVEEVQKLAA 360 (370)
T ss_pred HHHHhcCCeEEcccchhhhhhcccceeecc-hHHHHHHHHHHHHhhhhcc--ccccccccchhhh-hccccHHHHHHHHH
Confidence 9999988887543 33 34678899975 5666677776666663322 2223345689865 33456899999999
Q ss_pred HHHHHHHH
Q psy3048 343 EISHQSSE 350 (367)
Q Consensus 343 ~l~~~~~~ 350 (367)
-++++.+.
T Consensus 361 ~m~~F~k~ 368 (370)
T KOG2790|consen 361 FMKEFQKK 368 (370)
T ss_pred HHHHHHHh
Confidence 99998764
No 391
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.55 E-value=0.00056 Score=63.65 Aligned_cols=132 Identities=12% Similarity=0.118 Sum_probs=79.0
Q ss_pred CceEEEecCCcchhHHHHHHh----------CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecC--CC--
Q psy3048 29 SRLVAYASDQSNSSVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLG--TT-- 94 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~----------~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~--~t-- 94 (367)
++.-+.++..-+-++.+.+.+ .|++.++|++.+++.+|.+.+++++++.++ +|.+.=. .+
T Consensus 96 GD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R 169 (403)
T PF06838_consen 96 GDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTK------MVLIQRSRGYSWR 169 (403)
T ss_dssp T-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS
T ss_pred CCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCce------EEEEecCCCCCCC
Confidence 456666666666667766643 467889999999999999999999998774 5555421 11
Q ss_pred cccccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhh
Q psy3048 95 GTCAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLT 171 (367)
Q Consensus 95 ~~G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~ 171 (367)
+.=.+++|+++.+++|+ .++.++||.|||-+.-..+ +..-| +|.+..|.=|..++. .-+|.-++.+.+.++
T Consensus 170 ~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E---P~~vG---ADl~aGSLIKNpGGgiAptGGYIaGr~~lVe 243 (403)
T PF06838_consen 170 PSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE---PTEVG---ADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE 243 (403)
T ss_dssp ----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GGGGT----SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC---ccccc---hhheeccceeCCCCCccCcCCEEechHHHHH
Confidence 11134677888888776 5789999999987654332 22223 599999999998775 234444444445454
Q ss_pred h
Q psy3048 172 N 172 (367)
Q Consensus 172 ~ 172 (367)
+
T Consensus 244 ~ 244 (403)
T PF06838_consen 244 R 244 (403)
T ss_dssp H
T ss_pred H
Confidence 3
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=95.71 E-value=0.046 Score=49.67 Aligned_cols=114 Identities=14% Similarity=0.071 Sum_probs=77.6
Q ss_pred ceEEEecCCcchhHHHHHHh----------CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecC----CCc
Q psy3048 30 RLVAYASDQSNSSVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLG----TTG 95 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----------~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~----~t~ 95 (367)
+.-++++..-+-.+++.+.+ +|++.+.|++..+|.+|.+.+++++.+.++ +|.+.-. .-+
T Consensus 108 Dell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~Rp 181 (416)
T COG4100 108 DELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRP 181 (416)
T ss_pred CeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccce------EEEEEeccCcCCCC
Confidence 55566665555566665433 466778888888999999999999999885 4444321 112
Q ss_pred ccccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc
Q psy3048 96 TCAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 96 ~G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
.=.+++|+++..+.|+ -++.++||.|||-+.--. .+..- .+|.+..|.-|.-++
T Consensus 182 S~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~---EPt~v---GaDliAGSLIKNpGG 237 (416)
T COG4100 182 SLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK---EPTHV---GADLIAGSLIKNPGG 237 (416)
T ss_pred cccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc---Ccccc---chhhhccceeeCCCC
Confidence 2345788888888886 468999999998654322 22112 359999999997443
No 393
>KOG1411|consensus
Probab=95.48 E-value=0.18 Score=46.90 Aligned_cols=258 Identities=18% Similarity=0.185 Sum_probs=143.0
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
+.-.||++..+.--..+.-...|+.+.++... .+..+|.+.+-+.+.+.... ..+++--..+|+||+= +..+
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~g---s~ilLhaCaHNPTGvDPt~eqw~ 221 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEG---SIILLHACAHNPTGVDPTKEQWE 221 (427)
T ss_pred cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCC---cEEEeehhhcCCCCCCccHHHHH
Confidence 34566777666555555555567877666552 46788888877777665432 2445555567889863 6789
Q ss_pred hHHHHHhhcCcEEEEeccccccccc---Chhhhhh---hCCCCCcceeeeccccccccC-Cccee--EEEecchhhhhhc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALL---LPEYAHL---KRGLEYVDSFAFNAHKWLLTN-HDCSA--MWVKNANHLTNTF 174 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~---~~~~~~~---~~~~~~~D~~~~~~hK~l~~p-~g~g~--l~~~~~~~~~~~~ 174 (367)
+|.++.++.+..-++|-|+-++..- -|.+..+ ..|. --.++-|.-|.++.- -..|. +++.+.+...+.-
T Consensus 222 ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~--~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~ 299 (427)
T KOG1411|consen 222 KISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH--EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVE 299 (427)
T ss_pred HHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC--ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHH
Confidence 9999999999999999998765432 1221111 1111 124555667776643 22333 4554444332221
Q ss_pred c-----CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH
Q psy3048 175 F-----TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK 249 (367)
Q Consensus 175 ~-----~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (367)
+ ..+.|-.+. - -|+.|+. . .-........| ..
T Consensus 300 SQlk~liRpmYSnPP---------~-----------------------hGArIv~---~-Il~d~~l~~~W-------~~ 336 (427)
T KOG1411|consen 300 SQLKILIRPMYSNPP---------L-----------------------HGARIVA---T-ILSDPDLKNQW-------LG 336 (427)
T ss_pred HHHHHHhcccccCCC---------c-----------------------cchhhhh---h-ccCChHHHHHH-------HH
Confidence 1 112221110 0 0111100 0 00001112222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEE-eC--CCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEE
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFEL-VC--PPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFV 326 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~-~~--~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~ 326 (367)
.+.-...|...+.+.+.+.|... |-.. +. ..+.++++|. ..+.+..+.|..+..+|++. . -|||
T Consensus 337 evk~MadRi~~mR~~L~d~L~~~-gs~~~W~hI~~QIGMF~fT-----gl~peQv~~l~ke~~iYmT~-----d--GRiS 403 (427)
T KOG1411|consen 337 EVKGMADRIISMRQQLFDALEKE-GSPGNWSHITKQIGMFCFT-----GLNPEQVDWLTKEYHIYLTK-----D--GRIS 403 (427)
T ss_pred HHHHHHHhhhhhHHHHhHHhhcC-CCCccHHHHHHhhheeeec-----CCCHHHHHHHHhhheeeecc-----C--ceEe
Confidence 34555667888899999998774 2211 00 1377888884 23567778888888777752 1 2665
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~ 349 (367)
+.. .+...+.++.++|.++.+
T Consensus 404 ~aG--~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 404 MAG--LSSSNVPYLADAIHAVTK 424 (427)
T ss_pred ecc--ccccCCcccchhhHhHhc
Confidence 532 244568888888887744
No 394
>KOG1403|consensus
Probab=95.23 E-value=0.42 Score=43.64 Aligned_cols=237 Identities=13% Similarity=0.083 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhh-hhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~-~~~~~~~~~ 141 (367)
-+.+++.+++...++......+...-.+--|++-| +.++++-.|.+|-.++.|+.+-++......+ .+..-++ -
T Consensus 193 ad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~f-i 271 (452)
T KOG1403|consen 193 ADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNF-I 271 (452)
T ss_pred hhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhcc-c
Confidence 35567777665544433333333333444566644 5678888899999999999987665443222 1111111 1
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|+++.. |-++-....+.+.... .+.+.+.. .-.|+..
T Consensus 272 PDIVtmg--KpmGNGhPVa~Vattk--eIA~Af~atgv~YFNT------------------------------------- 310 (452)
T KOG1403|consen 272 PDIVTMG--KPMGNGHPVAAVATTK--EIAQAFHATGVEYFNT------------------------------------- 310 (452)
T ss_pred cchheec--ccCCCCCeeeEEeccH--HHHHHhccccceehhc-------------------------------------
Confidence 2544432 2222222233444422 23333322 1222211
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeCCC-CceeE-EEEEcCC----
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVCPP-SMGLV-CFRLKGD---- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~~~-~~~~v-~f~~~~~---- 293 (367)
-+++........+.++.... +++.++..++.++|...|+++. ..+++++- ..+.+ -+.+..+
T Consensus 311 --------yGGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tR 379 (452)
T KOG1403|consen 311 --------YGGNPVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTR 379 (452)
T ss_pred --------cCCCchhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccC
Confidence 11222223333444554444 4455677788888877776642 35666542 22222 1222111
Q ss_pred ---chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCCC
Q psy3048 294 ---NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGSS 358 (367)
Q Consensus 294 ---~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~~ 358 (367)
...+..+..+|.+...+.+.. .-.+++.++|-+...+ ++++++.++..|.+++.-+++...+.
T Consensus 380 tP~tk~A~~~v~rlke~y~VLlsa-DGPh~NilKiKPPmCF-neena~e~v~~ld~iLT~mee~~~s~ 445 (452)
T KOG1403|consen 380 TPDTKEAHWVVNRLKELYRVLLSA-DGPHRNILKIKPPMCF-NEENADEFVLGLDEILTVMEERLASA 445 (452)
T ss_pred CCcHHHHHHHHHHHHHhhhEEEec-CCCCCceeecCCCccc-ChhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 223446667788777555542 2234568888665555 48999999999999988666555443
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=93.61 E-value=0.84 Score=42.68 Aligned_cols=79 Identities=13% Similarity=-0.013 Sum_probs=44.8
Q ss_pred cEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccc-ccCCcceeE
Q psy3048 84 PCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWL-LTNHDCSAM 162 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~g~l 162 (367)
+.+=++|+|+||.|.+.. .+++.-+..++.|-||-...+..-.. ..+-|+|-++..|.= -++...|+.
T Consensus 138 ~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~------~aD~DiMLFT~SK~TGHAGSR~GWA 206 (363)
T PF04864_consen 138 PYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITA------PADHDIMLFTLSKLTGHAGSRFGWA 206 (363)
T ss_dssp GEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-------B--SEEEEEHHHHCS-GGG-EEEE
T ss_pred CeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCC------CCCCceEEEEEecccCcccccccee
Confidence 567788999999998731 12355667789999987654422111 112389999998863 334678999
Q ss_pred EEecchhhhhh
Q psy3048 163 WVKNANHLTNT 173 (367)
Q Consensus 163 ~~~~~~~~~~~ 173 (367)
++++++..+++
T Consensus 207 lVKD~~Va~kM 217 (363)
T PF04864_consen 207 LVKDEEVAKKM 217 (363)
T ss_dssp EES-HHHHHHH
T ss_pred eecCHHHHHHH
Confidence 99988766554
No 396
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.59 E-value=6.9 Score=37.52 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=43.2
Q ss_pred cceEEEecCCCCC-cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEec
Q psy3048 52 VPVRQLRSDDNGV-LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 52 ~~v~~v~~~~~~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
.++.+++.++... .+.+.|.+.++...++ ...++++ ...-|.+.+++++.++||+.|+++++|=
T Consensus 114 QQllRvD~Ee~~~~~~~~~ll~~~~~~l~~---~~~vVLS--DY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 114 QQLLRLDFEEKFPIEDENKLLEKIKNALKS---FDALVLS--DYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred ceEEEecccccCcchhHHHHHHHHHHHhhc---CCEEEEe--ccccccchhHHHHHHHHHHcCCcEEECC
Confidence 3556666644332 4455566666554432 1245554 5668999999999999999999999993
No 397
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=74.25 E-value=22 Score=29.40 Aligned_cols=97 Identities=18% Similarity=0.123 Sum_probs=59.9
Q ss_pred CCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc--CChhhHHHHHhh-cCcEE------EE
Q psy3048 50 GDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF--DNLEELGPICQE-YNIWL------HV 118 (367)
Q Consensus 50 ~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i--~dl~~I~~l~~~-~gi~l------~v 118 (367)
.|--+..|.+-. +.+...+.|+++.++...+| ++++..|.|..|.- .+-++|.++|+. ||+.+ .|
T Consensus 24 ~GkVlLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~V 99 (162)
T COG0386 24 KGKVLLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDV 99 (162)
T ss_pred CCcEEEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEee
Confidence 343333344432 45667799999999888876 78888999988754 478999999994 88643 44
Q ss_pred ecc--cccccccChhhhhhhCCCCCcceeeeccccccc
Q psy3048 119 DAA--YAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL 154 (367)
Q Consensus 119 D~a--~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~ 154 (367)
-|. |.....+... ..+......+-||.+|++-
T Consensus 100 nG~~a~PLy~~L~~~----~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 100 NGKNAHPLYKYLKEQ----KPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred cCCCCCcHHHHHHhc----CCCCccCCccceeeEEEEE
Confidence 443 3222222111 1121123667777787653
No 398
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=72.60 E-value=12 Score=32.23 Aligned_cols=53 Identities=15% Similarity=-0.025 Sum_probs=41.5
Q ss_pred HHHHHHHHHHh-h-CCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEec
Q psy3048 68 DALLTAVKEDL-A-KGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 68 ~~L~~~l~~~~-~-~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
++|.-+++.-. + .....++|+++-+++..|.++|++.-+++++++|+.+|.=+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888886643 2 22334789999999889999999888899999999887654
No 399
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=68.43 E-value=23 Score=32.00 Aligned_cols=61 Identities=16% Similarity=0.070 Sum_probs=43.1
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEec-CCC----cccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATL-GTT----GTCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~-~~t----~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
..++++++.+++.-.++|-.-+++ ++ +.+ ++-..-|+..|..+.+.+++++++|-+|+++.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L--~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIIL--CERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEE--EccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 789999999988766555332333 33 222 22224578999998888999999999998764
No 400
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=66.84 E-value=23 Score=27.44 Aligned_cols=68 Identities=18% Similarity=0.151 Sum_probs=47.0
Q ss_pred HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc--CcEEEEeccc
Q psy3048 45 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAY 122 (367)
Q Consensus 45 ~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~--gi~l~vD~a~ 122 (367)
...+..|.+++.++.+ .+.+++.+.+.+.. |.+|.++.. .+.......++++..|+. ++.+++=|.|
T Consensus 22 ~~l~~~G~~v~~~d~~----~~~~~l~~~~~~~~-----pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 22 AYLRKAGHEVDILDAN----VPPEELVEALRAER-----PDVVGISVS--MTPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp HHHHHTTBEEEEEESS----B-HHHHHHHHHHTT-----CSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred HHHHHCCCeEEEECCC----CCHHHHHHHHhcCC-----CcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 3345579999988764 35588888876653 456666642 345556778888888876 7899998877
Q ss_pred c
Q psy3048 123 A 123 (367)
Q Consensus 123 ~ 123 (367)
.
T Consensus 91 ~ 91 (121)
T PF02310_consen 91 A 91 (121)
T ss_dssp S
T ss_pred h
Confidence 4
No 401
>smart00642 Aamy Alpha-amylase domain.
Probab=66.66 E-value=12 Score=31.44 Aligned_cols=29 Identities=14% Similarity=0.176 Sum_probs=25.7
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.+++|-.
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44678889999999999999999999965
No 402
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=65.38 E-value=56 Score=29.69 Aligned_cols=61 Identities=20% Similarity=-0.001 Sum_probs=42.7
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc---cCChhhHHHHHhhcCcEEEEecccccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA---FDNLEELGPICQEYNIWLHVDAAYAGS 125 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~---i~dl~~I~~l~~~~gi~l~vD~a~~~~ 125 (367)
.++++++.+++.-.+.|-.-++++-...+++.+. .-++..|..+.+.+++++.+|..|+++
T Consensus 143 ~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 143 NTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 4899999998877655543333433312232132 358999999998899999999999876
No 403
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=65.11 E-value=28 Score=33.14 Aligned_cols=65 Identities=15% Similarity=-0.037 Sum_probs=44.9
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecC---C-CcccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLG---T-TGTCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~---~-t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
+-..+++++..+++.-.++|-.-++++-... . +++-..-|+..|..+.+.+++++++|.+|+.|.
T Consensus 216 G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 216 GMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 3445999999998776555543333333311 2 233345689999999888899999999998864
No 404
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=64.75 E-value=79 Score=30.25 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=43.2
Q ss_pred CCC-cCHHHHHHHHHHHhhCCCccEEEEEecCCCc---cccc-CChhhHHHHHhhcCcEEEEecccccc
Q psy3048 62 NGV-LRGDALLTAVKEDLAKGLIPCCLVATLGTTG---TCAF-DNLEELGPICQEYNIWLHVDAAYAGS 125 (367)
Q Consensus 62 ~~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~---~G~i-~dl~~I~~l~~~~gi~l~vD~a~~~~ 125 (367)
.|. .++++++.+++.-.+.|-..++++- .+.+. .|.. -|+..|..+-+.+++++++|..|+++
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~e-rg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCE-RGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEC-CccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 344 6999999999876655543333332 13331 1222 38999999999999999999999876
No 405
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=61.11 E-value=38 Score=33.92 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=49.9
Q ss_pred HHhCC-cceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc--CcEEEEecccc
Q psy3048 47 AIIGD-VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAYA 123 (367)
Q Consensus 47 ~~~~g-~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~--gi~l~vD~a~~ 123 (367)
++-.| .+|+.++.. ...++.+++.+.+.+.. |.+|.++. .+.......++++.+|+. ++.+++-|.|.
T Consensus 32 L~~~G~~~V~iiD~~-~~~~~~~~~~~~l~~~~-----pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAM-TGPLTDEKLVERLRAHC-----PDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEeccc-ccCCCHHHHHHHHHhcC-----cCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 34578 688888763 45678888888886643 55777763 244566678899988886 99999999885
Q ss_pred c
Q psy3048 124 G 124 (367)
Q Consensus 124 ~ 124 (367)
.
T Consensus 103 t 103 (497)
T TIGR02026 103 T 103 (497)
T ss_pred C
Confidence 4
No 406
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=59.27 E-value=23 Score=31.14 Aligned_cols=76 Identities=12% Similarity=0.074 Sum_probs=45.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
..++++ +..........+..|++++..+.+ |.+.|.++++... .|+...+.+.....+--..+.+.|
T Consensus 24 ~V~~l~-R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~li~Aa 90 (233)
T PF05368_consen 24 SVRALV-RDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKNLIDAA 90 (233)
T ss_dssp CEEEEE-SSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHHHHHHH
T ss_pred CcEEEE-eccchhhhhhhhcccceEeecccC-----CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhhHHHhh
Confidence 344444 444333444455578888766655 8999999997543 333343333234445567889999
Q ss_pred hhcCcEEEE
Q psy3048 110 QEYNIWLHV 118 (367)
Q Consensus 110 ~~~gi~l~v 118 (367)
++.|+..++
T Consensus 91 ~~agVk~~v 99 (233)
T PF05368_consen 91 KAAGVKHFV 99 (233)
T ss_dssp HHHT-SEEE
T ss_pred hccccceEE
Confidence 999987776
No 407
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=58.71 E-value=93 Score=28.50 Aligned_cols=65 Identities=6% Similarity=0.010 Sum_probs=41.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCC--cccccCChhhHHHHHhh-cCcEEEEecccc
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTT--GTCAFDNLEELGPICQE-YNIWLHVDAAYA 123 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t--~~G~i~dl~~I~~l~~~-~gi~l~vD~a~~ 123 (367)
.+..+.-+.++++.-+.+.-...|-. .+++.-=|.+ ++-.+.|+..|..+.+. -++++++|.+|+
T Consensus 134 ~lKrGqf~s~~e~~~aae~i~~~Gn~-~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHs 201 (281)
T PRK12457 134 NIKKPQFMSPTQMKHVVSKCREAGND-RVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHS 201 (281)
T ss_pred EecCCCcCCHHHHHHHHHHHHHcCCC-eEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcc
Confidence 33355567888888887766555533 3333333433 22234688888876664 399999999997
No 408
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=55.89 E-value=8.3 Score=39.46 Aligned_cols=36 Identities=11% Similarity=-0.055 Sum_probs=31.1
Q ss_pred EEecCCCcccccCChhhHHHHHhhcCcEEEEecccc
Q psy3048 88 VATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 88 v~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
-.=.+++..|..++++++++-||+.||-|++|-.++
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344567889999999999999999999999998654
No 409
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=55.67 E-value=36 Score=31.74 Aligned_cols=61 Identities=15% Similarity=-0.019 Sum_probs=42.5
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CChhhHHHHHhhcCcEEEEecccc
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
+..++.+++++.++.-.+.- ...-+++..|+-|.|.- +...++.++|++.|+.+++|.+..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l-~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALL-ESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhc-ccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 45678888877665443210 01123555577778876 578999999999999999998654
No 410
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=55.60 E-value=80 Score=28.81 Aligned_cols=62 Identities=18% Similarity=0.004 Sum_probs=41.2
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEecC---CCcccccCChhhHHHHHhhcCcEEEEecccccc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATLG---TTGTCAFDNLEELGPICQEYNIWLHVDAAYAGS 125 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~~---~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~ 125 (367)
..+++++..+.+.-...|-.-+.++.... +++.-..-++..|..+-+.+++++++|..|+.+
T Consensus 144 ~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 144 SATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 34888998888766555543344444422 223322347888888887889999999999875
No 411
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=55.29 E-value=93 Score=24.05 Aligned_cols=65 Identities=17% Similarity=0.018 Sum_probs=42.6
Q ss_pred HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEeccc
Q psy3048 47 AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVDAAY 122 (367)
Q Consensus 47 ~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD~a~ 122 (367)
.+..|.+|+.+. ....++++.+.+.+.. |.+|.++. +.+.....+.++.+.+|+. ++.+++=|.+
T Consensus 23 l~~~G~~V~~lg----~~~~~~~l~~~~~~~~-----pdvV~iS~--~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~ 90 (119)
T cd02067 23 LRDAGFEVIDLG----VDVPPEEIVEAAKEED-----ADAIGLSG--LLTTHMTLMKEVIEELKEAGLDDIPVLVGGAI 90 (119)
T ss_pred HHHCCCEEEECC----CCCCHHHHHHHHHHcC-----CCEEEEec--cccccHHHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 445788886554 3367888888876653 45666653 2344456778888888875 5677777654
No 412
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=55.13 E-value=16 Score=33.89 Aligned_cols=62 Identities=19% Similarity=0.198 Sum_probs=47.7
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|+++|+.+|.+.+++.++...+.|-.-++++.+.+.+++=..++-.++.+.+.+. .+++++-
T Consensus 15 PF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG 79 (299)
T COG0329 15 PFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAG 79 (299)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEe
Confidence 4456788999999999998887776557777888888888888888888888763 2566654
No 413
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=53.74 E-value=22 Score=32.09 Aligned_cols=28 Identities=29% Similarity=0.224 Sum_probs=24.1
Q ss_pred cccCChhhHHHHHhhcCcEEEEeccccc
Q psy3048 97 CAFDNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 97 G~i~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
|.+.+.+++.++++++++-+++|++|..
T Consensus 49 G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 4445789999999999999999999953
No 414
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=53.62 E-value=7.9 Score=35.40 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=27.8
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
..+..|..++++++++.||++|+.|++|-..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccchhhhhhhhhhccccccceEEEeeec
Confidence 4567899999999999999999999999754
No 415
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=51.80 E-value=46 Score=27.80 Aligned_cols=20 Identities=10% Similarity=-0.163 Sum_probs=12.1
Q ss_pred ChhhHHHHHhhcCcEEEEec
Q psy3048 101 NLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~ 120 (367)
|+..++.-.|++|..+++=|
T Consensus 117 DF~~Lv~~lre~G~~V~v~g 136 (160)
T TIGR00288 117 DFLPVINKAKENGKETIVIG 136 (160)
T ss_pred hHHHHHHHHHHCCCEEEEEe
Confidence 55666666666666666544
No 416
>PRK00685 metal-dependent hydrolase; Provisional
Probab=51.52 E-value=1.6e+02 Score=25.63 Aligned_cols=77 Identities=16% Similarity=0.007 Sum_probs=41.9
Q ss_pred eEEEecCCcchhH-HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 31 LVAYASDQSNSSV-EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 31 ~~v~~s~~~H~s~-~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.++++.++.+..- ....+..+.++..++....+.+++++..+..+.-. |..++.+|-.+..-.-.+.+++.+.+
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~~~h~~~~ea~~~~~~~~-----~k~~v~~H~~~~~~~~~~~~~~~~~~ 210 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKPDVALLPIGDNFTMGPEDAALAVELIK-----PKIVIPMHYNTFPLIEQDPEKFKALV 210 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCCCEEEEecCCccccCHHHHHHHHHhhC-----CCEEEEeccCCCcCCcCCHHHHHHHH
Confidence 4455555555442 22222345666666654345677777766654432 34666776544333334667777777
Q ss_pred hhc
Q psy3048 110 QEY 112 (367)
Q Consensus 110 ~~~ 112 (367)
++.
T Consensus 211 ~~~ 213 (228)
T PRK00685 211 EGL 213 (228)
T ss_pred Hhc
Confidence 663
No 417
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=50.65 E-value=28 Score=32.06 Aligned_cols=52 Identities=17% Similarity=0.085 Sum_probs=24.7
Q ss_pred cCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 59 SDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 59 ~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
+++++.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.
T Consensus 12 f~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~ 63 (289)
T cd00951 12 FDADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAV 63 (289)
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHH
Confidence 3455667777777666666555433233333333333223334444444333
No 418
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=47.69 E-value=13 Score=37.08 Aligned_cols=30 Identities=17% Similarity=-0.028 Sum_probs=27.4
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456789999999999999999999999985
No 419
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=46.12 E-value=1.8e+02 Score=28.08 Aligned_cols=82 Identities=18% Similarity=0.068 Sum_probs=51.1
Q ss_pred cCceEEEecCCcchh--------HHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCc
Q psy3048 28 KSRLVAYASDQSNSS--------VEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTG 95 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s--------~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~ 95 (367)
..+++.+....++.. +.++++ ..++.+...-+ .+-.-|++-|+++++... |.+|++-.++.
T Consensus 153 ~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~vPLIL~gs-g~~~kD~eVLeaaLe~~~--G~kpLL~SAt~---- 225 (389)
T TIGR00381 153 GADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDVPIVIGGS-GNPEKDPLVLEKAAEVAE--GERCLLASANL---- 225 (389)
T ss_pred CCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCCCEEEeCC-CCCcCCHHHHHHHHHHhC--CCCcEEEecCc----
Confidence 347777777777766 333332 24555543332 234558999999987653 33343222221
Q ss_pred ccccC-ChhhHHHHHhhcCcEEEEec
Q psy3048 96 TCAFD-NLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 96 ~G~i~-dl~~I~~l~~~~gi~l~vD~ 120 (367)
+ ++++++++|++||+.+++=+
T Consensus 226 ----e~Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 226 ----DLDYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred ----hhhHHHHHHHHHHhCCeEEEEc
Confidence 2 69999999999999887764
No 420
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=45.53 E-value=28 Score=27.78 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=39.8
Q ss_pred EEecCCcchhHHHHHHhCCc---ceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 33 AYASDQSNSSVEKSAIIGDV---PVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 33 v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
|..++...+...-+.-+.-. .+..+-..+ -..++.+.-++.+++-.+. . |-+++++.+. .|-+.+.
T Consensus 27 I~~~~i~Rpgl~L~G~~~~~~~~RIQiiG~~E~~yl~~l~~~~r~~~l~~l~~~-~-~P~iIvt~~~------~~p~~l~ 98 (127)
T PF02603_consen 27 ITSPDINRPGLELAGFFNYFHPNRIQIIGNTESAYLNSLDEEERKERLEKLFSY-N-PPCIIVTRGL------EPPPELI 98 (127)
T ss_dssp E-ECCEEE-HHHHTTS-TTTTTCSEEEE-HHHHHHHCCS-HHHHCCHHHHHCTT-T--S-EEEETTT---------HHHH
T ss_pred eeccccCCccHhhcCccccCCCCeEEEEcHHHHHHHHHCCHHHHHHHHHHHhCC-C-CCEEEEECcC------CCCHHHH
Confidence 66666555555444332222 232222111 1357777777777765532 2 3367777665 4799999
Q ss_pred HHHhhcCcEEEEe
Q psy3048 107 PICQEYNIWLHVD 119 (367)
Q Consensus 107 ~l~~~~gi~l~vD 119 (367)
++|++++++++.=
T Consensus 99 e~a~~~~ipll~t 111 (127)
T PF02603_consen 99 ELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHHCT--EEEE
T ss_pred HHHHHhCCcEEEc
Confidence 9999999988754
No 421
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=44.66 E-value=40 Score=30.88 Aligned_cols=54 Identities=20% Similarity=0.167 Sum_probs=29.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
|.++++.+|.+.+++.++...++|-..+++..+.+....=..++-.++.+.+.+
T Consensus 11 Pf~~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~ 64 (284)
T cd00950 11 PFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVE 64 (284)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHH
Confidence 445667777777777777666655443334333333333333455555555444
No 422
>PRK11633 cell division protein DedD; Provisional
Probab=44.02 E-value=1.1e+02 Score=27.25 Aligned_cols=53 Identities=13% Similarity=0.224 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhccCc-EEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 294 NDLTNQLYERLMSHKQ-IYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
....+.+.++|...|. .|+.+....+..+.|+ ...++.++++.++....|+++
T Consensus 160 ~~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV-~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 160 ADKVNEIVAKLRLSGYRVYTVPSTPVQGKITRI-YVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHHCCCeeEEEeeecCCCcEEEE-EeCCCCCHHHHHHHHHHHHHh
Confidence 3456789999999982 2332222222246788 457999999999999999875
No 423
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=43.87 E-value=22 Score=32.14 Aligned_cols=29 Identities=21% Similarity=0.101 Sum_probs=24.3
Q ss_pred ccccCChhhHHHHHhhcCcEEEEeccccc
Q psy3048 96 TCAFDNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 96 ~G~i~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
.|-+-+.+++.++|+++++-.+||++|..
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHPf 77 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHPF 77 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence 34444789999999999999999999953
No 424
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=43.59 E-value=45 Score=30.42 Aligned_cols=63 Identities=17% Similarity=0.082 Sum_probs=32.3
Q ss_pred EecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 57 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 57 v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
-|.++++.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.+. ++++++=
T Consensus 7 TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~g 72 (281)
T cd00408 7 TPFTADGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAG 72 (281)
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 34566778888888887777666553323333333332222234445555544432 3555443
No 425
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=42.58 E-value=34 Score=32.71 Aligned_cols=59 Identities=10% Similarity=0.033 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCc-ccccCChhhHHHHHhhcCcEEEEeccccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTG-TCAFDNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~-~G~i~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
+.++.++.|+...+.|+.-++-++..+... .-..+.+.+|.++|+++|..+++|-+...
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~~ 71 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPKV 71 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CCH
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence 678888899888888865555444444432 24457899999999999999999986543
No 426
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=42.24 E-value=51 Score=30.25 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=28.4
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
|.+++|.+|.+.+++.++...++|-..+++..+.+....=..+.-.++.+.+.+
T Consensus 9 Pf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~ 62 (285)
T TIGR00674 9 PFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVD 62 (285)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 445667777777777777666555443333334343333333444555554443
No 427
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=41.82 E-value=48 Score=30.61 Aligned_cols=62 Identities=13% Similarity=0.167 Sum_probs=33.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCC-CccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKG-LIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~-~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++| -.-+++..+.+....=..++-.++.+.+.+. .+++++=
T Consensus 11 Pf~~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~g 76 (290)
T TIGR00683 11 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQ 76 (290)
T ss_pred CCCCCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 445677888888888887766655 3333344443433333334455555544432 3455443
No 428
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=41.53 E-value=37 Score=31.43 Aligned_cols=53 Identities=17% Similarity=0.084 Sum_probs=25.4
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
|+++++.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.
T Consensus 16 Pf~~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~ 68 (296)
T TIGR03249 16 PFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAV 68 (296)
T ss_pred CcCCCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHH
Confidence 33455666666666666655554433333333333333333344444444433
No 429
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=41.23 E-value=44 Score=30.13 Aligned_cols=28 Identities=29% Similarity=0.197 Sum_probs=23.7
Q ss_pred cccCChhhHHHHHhhcCcEEEEeccccc
Q psy3048 97 CAFDNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 97 G~i~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
|..-+-+++.++.+++++.++||++|.-
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred cCcCCHHHHHHHHHHcCCCEEEECCChH
Confidence 3345689999999999999999999853
No 430
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=40.73 E-value=50 Score=30.39 Aligned_cols=53 Identities=25% Similarity=0.178 Sum_probs=26.0
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
|.++++.+|.+.+++.++...+.|-..+++..+.+....=..++-.++.+.+.
T Consensus 12 Pf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~ 64 (292)
T PRK03170 12 PFKEDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVV 64 (292)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHH
Confidence 44566677777777776666555533333333333333223334444444333
No 431
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=40.09 E-value=36 Score=28.67 Aligned_cols=48 Identities=17% Similarity=0.188 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcC--cEEEEeccccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYN--IWLHVDAAYAG 124 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~g--i~l~vD~a~~~ 124 (367)
|.++++++++...+ .+++- +|.+-.++++.+..++.| +++|+|-..|.
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56788888876553 33333 355668999999999877 68899976654
No 432
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.52 E-value=2e+02 Score=24.73 Aligned_cols=90 Identities=18% Similarity=0.169 Sum_probs=50.7
Q ss_pred ceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHH-HHHHHHHHHhhCCCccEEEEEecCCCcc--cccCCh
Q psy3048 30 RLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGD-ALLTAVKEDLAKGLIPCCLVATLGTTGT--CAFDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~-~L~~~l~~~~~~~~~~~~vv~~~~~t~~--G~i~dl 102 (367)
+..+++.++....-.+- ++..|+.+......+ |+. .+.+.+++..+++.. .+++-|.|.++. -.+..+
T Consensus 31 ~v~lis~D~~R~ga~eQL~~~a~~l~vp~~~~~~~~----~~~~~~~~~l~~~~~~~~D-~vlIDT~Gr~~~d~~~~~el 105 (196)
T PF00448_consen 31 KVALISADTYRIGAVEQLKTYAEILGVPFYVARTES----DPAEIAREALEKFRKKGYD-LVLIDTAGRSPRDEELLEEL 105 (196)
T ss_dssp -EEEEEESTSSTHHHHHHHHHHHHHTEEEEESSTTS----CHHHHHHHHHHHHHHTTSS-EEEEEE-SSSSTHHHHHHHH
T ss_pred cceeecCCCCCccHHHHHHHHHHHhccccchhhcch----hhHHHHHHHHHHHhhcCCC-EEEEecCCcchhhHHHHHHH
Confidence 67777777777664433 455677666554322 443 344566554332211 456666665532 334556
Q ss_pred hhHHHHHhhcCcEEEEeccccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
+++.+......+++++|+..+.
T Consensus 106 ~~~~~~~~~~~~~LVlsa~~~~ 127 (196)
T PF00448_consen 106 KKLLEALNPDEVHLVLSATMGQ 127 (196)
T ss_dssp HHHHHHHSSSEEEEEEEGGGGG
T ss_pred HHHhhhcCCccceEEEecccCh
Confidence 6666666666789999987644
No 433
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=39.24 E-value=1.8e+02 Score=26.39 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=42.0
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc---cCChhhHHHHHhhcCcEEEEecccc
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA---FDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~---i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
.+..+..++++++.-+.+.-...|-.- +++.-=|.+ +|. +-|+..|.-+-+ .++++++|.+|+
T Consensus 120 ~lKrG~~~t~~e~l~aaeyi~~~Gn~~-viLcERG~t-f~y~r~~~D~~~ip~~k~-~~~PVi~DpSHs 185 (258)
T TIGR01362 120 NVKKGQFLSPWDMKNVVEKVLSTGNKN-ILLCERGTS-FGYNNLVVDMRSLPIMRE-LGCPVIFDATHS 185 (258)
T ss_pred EecCCCcCCHHHHHHHHHHHHHcCCCc-EEEEeCCCC-cCCCCcccchhhhHHHHh-cCCCEEEeCCcc
Confidence 333556689999888777665554332 333333443 354 568888887655 589999999997
No 434
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=39.22 E-value=21 Score=36.27 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=26.9
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
+....|..++++++++-||++|+-|++|..+
T Consensus 152 ~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~ 182 (542)
T TIGR02402 152 PHNAYGGPDDLKALVDAAHGLGLGVILDVVY 182 (542)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3456788889999999999999999999864
No 435
>PRK10638 glutaredoxin 3; Provisional
Probab=38.91 E-value=1.4e+02 Score=21.26 Aligned_cols=68 Identities=10% Similarity=0.100 Sum_probs=38.1
Q ss_pred ceEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+.++|+.....++. .......|+....++.+.+ .+ ..+.+.+.+.....|.+++ . ....|-.+++.++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~----~~-~~~~l~~~~g~~~vP~i~~--~-g~~igG~~~~~~~ 72 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGD----AA-KREEMIKRSGRTTVPQIFI--D-AQHIGGCDDLYAL 72 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC----HH-HHHHHHHHhCCCCcCEEEE--C-CEEEeCHHHHHHH
Confidence 56788777776664 2334457888888877542 22 3344444444555675432 2 3445655555444
No 436
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=38.83 E-value=1.6e+02 Score=24.06 Aligned_cols=66 Identities=18% Similarity=0.042 Sum_probs=40.2
Q ss_pred CCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 37 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 37 ~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+.+.+.+...++..|++++.+..-.| |++.+++++++..++ ....+|+.+ +-+..|-.|-..+..+
T Consensus 19 d~n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~-~~~DlVitt-GG~s~g~~D~t~~al~ 84 (152)
T cd00886 19 DRSGPALVELLEEAGHEVVAYEIVPD---DKDEIREALIEWADE-DGVDLILTT-GGTGLAPRDVTPEATR 84 (152)
T ss_pred cchHHHHHHHHHHcCCeeeeEEEcCC---CHHHHHHHHHHHHhc-CCCCEEEEC-CCcCCCCCcCcHHHHH
Confidence 34445566667778998887765333 888898888765541 012345445 5566777765554433
No 437
>PLN03244 alpha-amylase; Provisional
Probab=38.78 E-value=22 Score=37.43 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=28.6
Q ss_pred ecCCCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 90 TLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 90 ~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
-.+++..|..++++++++-||+.|+-|++|-.+
T Consensus 431 FApssRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 431 FAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 345667888999999999999999999999865
No 438
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=38.31 E-value=46 Score=30.57 Aligned_cols=61 Identities=16% Similarity=0.117 Sum_probs=32.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-+++..+.+....=..+.-.+|.+++.+ .++++++
T Consensus 12 Pf~~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 12 PFNADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp -BETTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 445677888888888887776665443333334333333333455556655544 2455555
No 439
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=37.91 E-value=66 Score=24.95 Aligned_cols=49 Identities=12% Similarity=-0.017 Sum_probs=37.4
Q ss_pred CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 63 GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 63 ~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
..+++++|++.+.+.+. .+++.. -.+|.+.=.++-.+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee~~E------~ivvGT--G~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEEGPE------VIVVGT--GQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhcCCc------EEEEec--CceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 68999999999987764 444443 34688887889999999999766553
No 440
>TIGR03586 PseI pseudaminic acid synthase.
Probab=37.45 E-value=3.3e+02 Score=25.73 Aligned_cols=60 Identities=13% Similarity=0.089 Sum_probs=29.6
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc-cCChhhHHHHHhhcCcEE-EEecccccc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA-FDNLEELGPICQEYNIWL-HVDAAYAGS 125 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~-i~dl~~I~~l~~~~gi~l-~vD~a~~~~ 125 (367)
.-++++++.+++--.++|...++++-+..+.++-. -.+|..|..+.+++++++ +.| |+.+
T Consensus 143 ~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G 204 (327)
T TIGR03586 143 IATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLG 204 (327)
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCc
Confidence 34677777766554444432233322221111111 135667777767777766 556 5443
No 441
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=36.91 E-value=47 Score=30.61 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=37.0
Q ss_pred ecCCCCCcCHHHHHHHHHHHhh-CCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLA-KGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~-~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...+ +|-.-+++..+.+....=..++-.++.+.+.+. ++++++
T Consensus 14 Pf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~via 78 (293)
T PRK04147 14 PFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIA 78 (293)
T ss_pred cCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEe
Confidence 4467888999999998888776 664444444444444333345555565555442 355554
No 442
>PRK12313 glycogen branching enzyme; Provisional
Probab=36.32 E-value=25 Score=36.42 Aligned_cols=29 Identities=10% Similarity=-0.058 Sum_probs=25.2
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
...|..++++++++.||++|+.|++|..+
T Consensus 214 ~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~ 242 (633)
T PRK12313 214 SRYGTPEDFMYLVDALHQNGIGVILDWVP 242 (633)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 35677789999999999999999999753
No 443
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=36.20 E-value=1.9e+02 Score=23.49 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=44.4
Q ss_pred eEEEecCCcchhHHHHHHhC-CcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecC--CCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIG-DVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLG--TTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~-g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~--~t~~G~i~dl~~I~ 106 (367)
+.++.+.. ..+..+.. |+++..|.... +|. .++.+.+.... +-++++.+ ....+...|...|.
T Consensus 33 f~l~AT~g----Ta~~L~~~~Gi~v~~vi~~~~gg~---~~i~~~I~~g~------i~lVInt~dp~~~~~~~~D~~~IR 99 (142)
T PRK05234 33 HELYATGT----TGGLIQEATGLDVTRLLSGPLGGD---QQIGALIAEGK------IDMLIFFRDPLTAQPHDPDVKALL 99 (142)
T ss_pred CEEEEeCh----HHHHHHhccCCeeEEEEcCCCCCc---hhHHHHHHcCc------eeEEEEecCCCCCCcccchHHHHH
Confidence 44555442 23333345 88887773222 233 44555664432 23334433 33333356788999
Q ss_pred HHHhhcCcEEEEecc
Q psy3048 107 PICQEYNIWLHVDAA 121 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a 121 (367)
+.|-+||++++..-+
T Consensus 100 R~Av~~~IP~~T~l~ 114 (142)
T PRK05234 100 RLADVWNIPVATNRA 114 (142)
T ss_pred HHHHHcCCCEEcCHH
Confidence 999999999887643
No 444
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.13 E-value=1.4e+02 Score=22.30 Aligned_cols=68 Identities=10% Similarity=-0.005 Sum_probs=39.4
Q ss_pred hhHHHHHHhCCcceEEEecCCCCCcCHH--HHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEE
Q psy3048 41 SSVEKSAIIGDVPVRQLRSDDNGVLRGD--ALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHV 118 (367)
Q Consensus 41 ~s~~~~~~~~g~~v~~v~~~~~~~~d~~--~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~v 118 (367)
..+.+.++-.|.+++.. ..++ ..... .|++.+.+.- .+|+++. .-.. +-...+-+.|+++|++++.
T Consensus 13 ~~~~~~~~~~G~~~~~h-g~~~-~~~~~~~~l~~~i~~aD------~VIv~t~-~vsH---~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH-GRDG-GDEKKASRLPSKIKKAD------LVIVFTD-YVSH---NAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHHHHcCCEEEEE-ecCC-CCccchhHHHHhcCCCC------EEEEEeC-CcCh---HHHHHHHHHHHHcCCcEEE
Confidence 34555677789988888 3222 22333 3776664321 2333332 2222 2467888999999998765
Q ss_pred ec
Q psy3048 119 DA 120 (367)
Q Consensus 119 D~ 120 (367)
=-
T Consensus 81 ~~ 82 (97)
T PF10087_consen 81 SR 82 (97)
T ss_pred EC
Confidence 43
No 445
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=35.40 E-value=77 Score=31.40 Aligned_cols=55 Identities=20% Similarity=0.067 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CChhhHHHHH-hhcCcEEEEeccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNLEELGPIC-QEYNIWLHVDAAY 122 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl~~I~~l~-~~~gi~l~vD~a~ 122 (367)
+-+.|++++.+-.+... |.++++... =.+|.+ +|++.+++-+ +++|++++.=-|-
T Consensus 81 ~~~~L~~~i~ei~~~~~-p~~ifv~~T-C~t~iIGdDle~va~~~~~~~gipVV~v~~~ 137 (457)
T CHL00073 81 DYEELKRLCLQIKKDRN-PSVIVWIGT-CTTEIIKMDLEGMAPKLEAEIGIPIVVARAN 137 (457)
T ss_pred CHHHHHHHHHHHHHhCC-CCEEEEEcc-CcHHhhccCHHHHHHHHHHhhCCCEEEEeCC
Confidence 45788888887665443 444333332 336777 8999998755 4789988765553
No 446
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=35.36 E-value=56 Score=30.20 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=37.1
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~v 118 (367)
|.+++|.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.+ .++++++
T Consensus 11 Pf~~dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~ 74 (294)
T TIGR02313 11 PFKRNGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAP 74 (294)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 556789999999999998877766444444444444443344555556554432 2355553
No 447
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=35.25 E-value=1.4e+02 Score=20.31 Aligned_cols=47 Identities=19% Similarity=0.029 Sum_probs=28.6
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
++.+.++++.+..++.. . ..+.++-.++..| ..++.+.++++|+.++
T Consensus 12 ~~~~~~~~~~~~a~~~g---~--~~v~iTDh~~~~~----~~~~~~~~~~~gi~~i 58 (67)
T smart00481 12 DGALSPEELVKRAKELG---L--KAIAITDHGNLFG----AVEFYKAAKKAGIKPI 58 (67)
T ss_pred cccCCHHHHHHHHHHcC---C--CEEEEeeCCcccC----HHHHHHHHHHcCCeEE
Confidence 56677777766655433 1 2455555444444 4577788888887664
No 448
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=35.17 E-value=4.3e+02 Score=25.62 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=58.1
Q ss_pred eEEEecCCcchhHHHHHHh-------CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 31 LVAYASDQSNSSVEKSAII-------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~-------~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.+++.-.+.|.+....++. .|+.|+.+.+... ++.++.+.+.+.. .+++-+|+-..+..-++.
T Consensus 248 ~V~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~~~~---~~~eI~~~i~~a~-------~~vvGsPT~~~~~~p~i~ 317 (388)
T COG0426 248 KVDLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINLEDA---DPSEIVEEILDAK-------GLVVGSPTINGGAHPPIQ 317 (388)
T ss_pred eEEEEEecccCCHHHHHHHHHHHhhhcCCceEEEEcccC---CHHHHHHHHhhcc-------eEEEecCcccCCCCchHH
Confidence 3444445667666555442 5788888887644 8888888887654 555555544445555565
Q ss_pred hHHHHHhh---cCcEEEEecccccccccChhhhhhhCC
Q psy3048 104 ELGPICQE---YNIWLHVDAAYAGSALLLPEYAHLKRG 138 (367)
Q Consensus 104 ~I~~l~~~---~gi~l~vD~a~~~~~~~~~~~~~~~~~ 138 (367)
...-.... ++-...+=|++|+.....+....++..
T Consensus 318 ~~l~~v~~~~~~~k~~~vfgS~GW~g~av~~i~~~l~~ 355 (388)
T COG0426 318 TALGYVLALAPKNKLAGVFGSYGWSGEAVDLIEEKLKD 355 (388)
T ss_pred HHHHHHHhccCcCceEEEEeccCCCCcchHHHHHHHHh
Confidence 54443332 334466667777766666555554443
No 449
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=35.09 E-value=90 Score=27.09 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=33.7
Q ss_pred HHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEE
Q psy3048 71 LTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHV 118 (367)
Q Consensus 71 ~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~v 118 (367)
|..++=..-.|..|..|+.-.. +..|.....+++.++|++||++++-
T Consensus 144 EasVdLarlAGl~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 144 EAAVDLARLAGLKPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred HHHHHHHHHcCCCCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEEE
Confidence 4444433346777866555543 5589999999999999999998763
No 450
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=35.08 E-value=81 Score=27.27 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=33.0
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
=|.+++=..-.|..|..|+.... +..|...+.+++.++|++||++++
T Consensus 139 tEaavdLa~lAGl~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 139 TEAAVDLARLAGLSPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp HHHHHHHHHHTTS-SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEE
T ss_pred HHHHHHHHHHhCCCCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 34444444446777876666554 558999999999999999999875
No 451
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=34.79 E-value=55 Score=30.42 Aligned_cols=61 Identities=11% Similarity=-0.004 Sum_probs=32.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|+++++.+|.+.+++.++...++|-.-+++..+.+...+=..++-.++.+.+.+. ++++++
T Consensus 18 Pf~~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 18 PFDADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4456778888888888776666553333343443333333334445555544332 355554
No 452
>PLN02417 dihydrodipicolinate synthase
Probab=34.75 E-value=55 Score=30.02 Aligned_cols=62 Identities=15% Similarity=0.020 Sum_probs=35.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|+++++.+|.+.+++.++...++|-.-+++..+.+...+=..++-.++.+.+.+. .+++++-
T Consensus 12 Pf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~g 76 (280)
T PLN02417 12 PYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGN 76 (280)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 4466788888888888877766554434444444444444445555555544432 3555543
No 453
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=34.65 E-value=1.9e+02 Score=24.32 Aligned_cols=87 Identities=9% Similarity=-0.054 Sum_probs=52.9
Q ss_pred ceEEEecCCcchhHHH-HHHhCCcceEEEecCCC-----CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC--
Q psy3048 30 RLVAYASDQSNSSVEK-SAIIGDVPVRQLRSDDN-----GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-- 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~-~~~~~g~~v~~v~~~~~-----~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-- 101 (367)
.|.+++++..|..+.. ..+..|++...++.|.. -.--.+++++.+++..+.+....+++++ |..|..+|
T Consensus 18 ~P~l~V~si~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvS---NsaGs~~d~~ 94 (168)
T PF09419_consen 18 LPHLYVPSIRDIDFEANHLKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVS---NSAGSSDDPD 94 (168)
T ss_pred CCCEEcCChhhCCcchhhhhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEE---CCCCcccCcc
Confidence 4556668888888766 24456888877777531 1112256677777766654322233333 44566654
Q ss_pred hhhHHHHHhhcCcEEEEe
Q psy3048 102 LEELGPICQEYNIWLHVD 119 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD 119 (367)
-.+...+.++.|+.++.=
T Consensus 95 ~~~a~~~~~~lgIpvl~h 112 (168)
T PF09419_consen 95 GERAEALEKALGIPVLRH 112 (168)
T ss_pred HHHHHHHHHhhCCcEEEe
Confidence 567777888888876543
No 454
>PRK05402 glycogen branching enzyme; Provisional
Probab=34.62 E-value=27 Score=36.85 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=25.9
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
+...|..++++++++-||++|+.|++|...
T Consensus 308 ~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~ 337 (726)
T PRK05402 308 TSRFGTPDDFRYFVDACHQAGIGVILDWVP 337 (726)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 445677789999999999999999999753
No 455
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. This model describes coenzyme PQQ biosynthesis protein B, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases. Note that this gene appears to be required for PQQ in biosynthesis in Methylobacterium extorquens (under the name pqqG) and in Klebiella pneumoniae but that the equivalent pqqV in Acinetobacter calcoaceticus is not necessary for heterologous expression of PQQ biosynthesis in E. coli. Based on this latter finding, it is suggested (Goosen, et al. 1989) that PqqB might be a transporter or a PQQ-dependent enzyme rather than a PQQ biosynthesis enzyme.
Probab=34.59 E-value=2.5e+02 Score=26.02 Aligned_cols=89 Identities=7% Similarity=-0.099 Sum_probs=44.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC------------------CCCCcCHHHHHHHHHHHhhCCCccEEEEEec
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD------------------DNGVLRGDALLTAVKEDLAKGLIPCCLVATL 91 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~------------------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~ 91 (367)
+-.+|++++.+..-.-.-.+.++++..++.+ ..+.++.++..+++....+.+ +.-++++|
T Consensus 191 ~~~~y~tD~g~~~~~~~~~l~~~d~liida~~~~d~e~l~~g~ypri~~~~gHls~~~~~~al~~~~~~~--~~~~~l~H 268 (302)
T TIGR02108 191 KRLFYIPGCAEITDDLKARMAGADLVFFDGTLWRDDEMIRAGVGTKTGRRMGHVSMSGEGGSLAVLADLE--IARKVLIH 268 (302)
T ss_pred cEEEEECCCCCCCHHHHHHHhCCCEEEEeCCCCCcHHHHhcCCCCCcCCCCCCCCccchHHHHHHhhcCC--CCcEEEEe
Confidence 4566667766555332223456666666654 124566555555554433221 23455666
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEec
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
.+...+..++=....+.....|+.+=.||
T Consensus 269 l~h~~~~~~~~~~~~~~~~~~~~~~ayDG 297 (302)
T TIGR02108 269 INNTNPILDEDSPERAEVEAAGWEVAYDG 297 (302)
T ss_pred cCCCCcCCCCCCHHHHHHHHcCCEEecCC
Confidence 66644544433333444444555555553
No 456
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=34.54 E-value=2.3e+02 Score=23.81 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=27.3
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
++..++........+.....++|.++..++.+ +.++++..+++..+.|
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~-----~~~e~~~~i~~~~~~G 125 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGVDIKIYPYD-----SEEEIEAAIKQAKAEG 125 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT-EEEEEEES-----SHHHHHHHHHHHHHTT
T ss_pred CcEEEEecccccHHHHHHHHHhCCceEEEEEC-----CHHHHHHHHHHHHHcC
Confidence 34445544444444556666667777776665 5667777776655544
No 457
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=33.67 E-value=3.5e+02 Score=25.59 Aligned_cols=63 Identities=21% Similarity=-0.007 Sum_probs=42.9
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEecCCCc---ccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATLGTTG---TCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~---~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
..+++++..+.+.-...|-..+.++-...+++ +=..-|+..|..+-+.+++++++|..|+.+.
T Consensus 210 ~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 210 SATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 44889998888766555443344444322232 2233588999998888899999999998764
No 458
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=33.40 E-value=2.5e+02 Score=27.14 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=47.6
Q ss_pred ccCceEEEecCCcch--hHHHHHH----hCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 27 IKSRLVAYASDQSNS--SVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 27 ~~~~~~v~~s~~~H~--s~~~~~~----~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
+..+++.+....++. .+.++++ ..++.++.+-+ |++-|+++++... +.+|.+-..+- +
T Consensus 68 ~~~D~Ialr~~S~DPae~fa~~vk~V~~a~~~PLIL~~~------D~evl~aale~~~--~~kpLL~aAt~--------e 131 (386)
T PF03599_consen 68 LGADMIALRLESGDPAEEFAKAVKKVAEAVDVPLILCGC------DPEVLKAALEACA--GKKPLLYAATE--------E 131 (386)
T ss_dssp EE-SEEEEE-GGGSTHHHHHHHHHHHHHC-SSEEEEESS------HHHHHHHHHHHTT--TS--EEEEEBT--------T
T ss_pred ccccEEEEEecCCChHHHHHHHHHHHHHhcCCCEEEEeC------CHHHHHHHHHHhC--cCCcEEeEcCH--------H
Confidence 345888888888885 3333333 23444443322 9999999987664 33454444332 3
Q ss_pred ChhhHHHHHhhcCcEEEEecc
Q psy3048 101 NLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 101 dl~~I~~l~~~~gi~l~vD~a 121 (367)
+.++++++|++||..+.+=+.
T Consensus 132 Nyk~m~~lA~~y~~pl~v~sp 152 (386)
T PF03599_consen 132 NYKAMAALAKEYGHPLIVSSP 152 (386)
T ss_dssp THHHHHHHHHHCT-EEEEE-S
T ss_pred HHHHHHHHHHHcCCeEEEEec
Confidence 599999999999999988653
No 459
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=33.19 E-value=2e+02 Score=26.47 Aligned_cols=64 Identities=13% Similarity=-0.005 Sum_probs=43.0
Q ss_pred EecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhcCcEEEEecccc
Q psy3048 57 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 57 v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
|.+..+-.++++++.-+.+.-...|-. .+++.-=|.+ +|.- -|+..+..+. +.++++++|.+|+
T Consensus 133 V~lKkGq~~t~~e~~~aaeki~~~GN~-~viLcERG~t-Fgy~~lv~D~r~ip~mk-~~~lPVI~DpSHs 199 (290)
T PLN03033 133 INIKKGQFCAPSVMRNSAEKVRLAGNP-NVMVCERGTM-FGYNDLIVDPRNLEWMR-EANCPVVADITHS 199 (290)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHcCCC-cEEEEeCCCC-cCCCCcccchhhhHHHH-hcCCCEEEeCCcc
Confidence 344466678999998888766555533 3333333433 3433 6888888764 6899999999996
No 460
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=32.57 E-value=30 Score=35.70 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=25.1
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
...|..++++++++-||++|+.|++|..+
T Consensus 200 ~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~ 228 (613)
T TIGR01515 200 SRFGTPDDFMYFVDACHQAGIGVILDWVP 228 (613)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 35567789999999999999999999863
No 461
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=32.18 E-value=1.7e+02 Score=26.83 Aligned_cols=117 Identities=22% Similarity=0.260 Sum_probs=65.8
Q ss_pred HHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcce-EEEecCCCCCcCHHHHHHHHHHHhhCCC
Q psy3048 4 ILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPV-RQLRSDDNGVLRGDALLTAVKEDLAKGL 82 (367)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v-~~v~~~~~~~~d~~~L~~~l~~~~~~~~ 82 (367)
+..+|.+++++.- +... .+...++.+.+-.+ +.|..+ ++|+.+ |.+.+.++++...+..
T Consensus 32 ~~~~R~~~i~~ie-------~kr~-srvI~~Ihrqe~~~------~~giPi~~~I~i~-----dse~v~raI~~~~~~~- 91 (285)
T PF01972_consen 32 LEAARLRLIREIE-------EKRG-SRVITLIHRQERVS------FLGIPIYRYIDID-----DSEFVLRAIREAPKDK- 91 (285)
T ss_pred HHHHHHHHHHHHH-------HHhC-CEEEEEEEeccccc------eeccccceeEcHh-----hHHHHHHHHHhcCCCC-
Confidence 4567777776642 2221 24555554433333 345533 334433 6666777776543321
Q ss_pred ccEEEEEecCCCcccccCChhhHHHHHhhcCc--EEEE-ecccccccccChhhhhhhCCCCCcceeeeccccccc
Q psy3048 83 IPCCLVATLGTTGTCAFDNLEELGPICQEYNI--WLHV-DAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL 154 (367)
Q Consensus 83 ~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi--~l~v-D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~ 154 (367)
++.+++ +|+-|.++.-.+|+.+.+++.. .++| +-|.++|.+.. + .||-+..+.+-.++
T Consensus 92 -~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIA---------L-aADeIvM~p~a~LG 152 (285)
T PF01972_consen 92 -PIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIA---------L-AADEIVMGPGAVLG 152 (285)
T ss_pred -ceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHH---------H-hCCeEEECCCCccC
Confidence 333332 5788999999999999998764 3344 45776665532 1 23766666666554
No 462
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.54 E-value=1.7e+02 Score=25.54 Aligned_cols=82 Identities=15% Similarity=0.085 Sum_probs=41.3
Q ss_pred ceEEEecCCcchhHHH-HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh-hhHHH
Q psy3048 30 RLVAYASDQSNSSVEK-SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL-EELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~-~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl-~~I~~ 107 (367)
+.++++|..---.+.. ..+-+|+++++=-.+.++.--+.++.+.+++.. -+++.+..+-|-+..+ +.|..
T Consensus 69 ~~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~--------~i~itpDgPkGp~~~~~~Gii~ 140 (214)
T COG2121 69 KIYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGK--------SIAITPDGPKGPVHKIGDGIIA 140 (214)
T ss_pred cEEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCC--------cEEEcCCCCCCCceeccchhhH
Confidence 4666666544444322 233466666554444444333333333333322 1234455666655433 56777
Q ss_pred HHhhcCcEEEEe
Q psy3048 108 ICQEYNIWLHVD 119 (367)
Q Consensus 108 l~~~~gi~l~vD 119 (367)
||+++|++++-=
T Consensus 141 LA~~sg~pi~pv 152 (214)
T COG2121 141 LAQKSGVPIIPV 152 (214)
T ss_pred hhHhcCCCeEEE
Confidence 777777765443
No 463
>PF00793 DAHP_synth_1: DAHP synthetase I family; InterPro: IPR006218 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms (see IPR002480 from INTERPRO) []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products. In Escherichia coli there are three DAHP synthetase isoforms, each specifically inhibited by one of the three aromatic amino acids. The crystal structure of the phenylalanine-regulated form of DAHP synthetase shows the fold as is a (beta/alpha)8 barrel with several additional beta strands and alpha helices []. ; GO: 0009058 biosynthetic process; PDB: 3FS2_B 3STF_B 3FYP_D 3QQ1_A 3QPZ_C 3FYO_D 3STC_A 2QKF_D 3STE_C 3QQ0_A ....
Probab=31.03 E-value=48 Score=30.29 Aligned_cols=72 Identities=14% Similarity=0.048 Sum_probs=47.8
Q ss_pred ceEEEecCCCCCcCHHHHHHHHHHHhhCCC-ccEE---EEEecCCCcccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 53 PVRQLRSDDNGVLRGDALLTAVKEDLAKGL-IPCC---LVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 53 ~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~-~~~~---vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
.++-++- +-...++++..+.++....|. .-.. ..+..+..+.-...|+..+..+.++.++++++|.+|+.+.
T Consensus 132 ~pV~~K~--g~~~ai~~~~~Aae~~~~~G~n~~~~l~erglr~g~~~n~~~~di~~~~~~~~~~~lpVivD~SH~~~~ 207 (270)
T PF00793_consen 132 KPVGFKN--GTFAAIDEWLAAAEKHLFLGINSGNILCERGLRGGYGPNYNVLDIAAVPIMKKKTHLPVIVDPSHANSR 207 (270)
T ss_dssp SEEEEEE---TTSHGGGHHHHHHHHHHTTECSSEEEEEEEEEESSSSSSEEHHTTHHHHHHHHTSSEEEEEHHHHTTT
T ss_pred CeEEecc--CCccCHHHHHHHHhhhhhhcCCCCCeeeeeeeeccccccccchhHHHHHHHHHhcCCCEEECchhhhcc
Confidence 3444543 233678888888777665551 2221 3344445445556789999999999999999999997654
No 464
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=30.72 E-value=2.3e+02 Score=22.45 Aligned_cols=47 Identities=13% Similarity=0.249 Sum_probs=29.2
Q ss_pred eEEEecCCcchhHHHHHHhC------CcceEEEecCCCCCcCHHHHHHHHHHHhh
Q psy3048 31 LVAYASDQSNSSVEKSAIIG------DVPVRQLRSDDNGVLRGDALLTAVKEDLA 79 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~------g~~v~~v~~~~~~~~d~~~L~~~l~~~~~ 79 (367)
.++|+++..-|.-.+.+... +++++.||+ .|++|++.+.+++.....
T Consensus 2 Il~F~C~~~ay~aad~ag~~~~~~p~~vriIrvpC--~Grv~~~~il~Af~~GAD 54 (124)
T PF02662_consen 2 ILAFCCNWCAYAAADLAGVSRLQYPPNVRIIRVPC--SGRVDPEFILRAFEKGAD 54 (124)
T ss_pred EEEEEeCCCcHHHHHHHhhccCCCCCCeEEEEccC--CCccCHHHHHHHHHcCCC
Confidence 45666555555544444332 234455554 599999999999987643
No 465
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=30.58 E-value=1.8e+02 Score=23.40 Aligned_cols=59 Identities=14% Similarity=-0.004 Sum_probs=41.3
Q ss_pred CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH-H----HHhhc-CcEE-EEeccccc
Q psy3048 61 DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG-P----ICQEY-NIWL-HVDAAYAG 124 (367)
Q Consensus 61 ~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~-~----l~~~~-gi~l-~vD~a~~~ 124 (367)
.+..-+.+.|.+.+++.. +..+|+-.|.+..|...+..+.+ + +.+++ ++++ ++|+.++.
T Consensus 34 ~~~~~~~~~l~~li~~~~-----i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 34 RNREKDIEELKKLIEEYQ-----IDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCCCHHHHHHHHHHCC-----ECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CCCchHHHHHHHHHHHhC-----CCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 344679999999998864 45788888999889887654433 2 44455 8866 78987643
No 466
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=30.40 E-value=1.1e+02 Score=24.43 Aligned_cols=56 Identities=14% Similarity=0.007 Sum_probs=38.0
Q ss_pred CcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH-----HHhhcCcEE-EEeccccc
Q psy3048 64 VLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP-----ICQEYNIWL-HVDAAYAG 124 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~-----l~~~~gi~l-~vD~a~~~ 124 (367)
..+.+.|++.+++.. +..+++-.|-++.|...+..+.++ |.+++++++ ++|+-++.
T Consensus 34 ~~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~TT 95 (130)
T TIGR00250 34 EPDWSRIEELLKEWT-----PDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLST 95 (130)
T ss_pred cHHHHHHHHHHHHcC-----CCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 345778888877654 457889999999999877543332 444567654 77876543
No 467
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=30.24 E-value=2.2e+02 Score=26.73 Aligned_cols=47 Identities=9% Similarity=-0.071 Sum_probs=31.6
Q ss_pred CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 63 GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 63 ~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
-.-|++.|+++++.... .+|++ ...+ .+.+++|.++|++||+.+++=
T Consensus 135 ~~kD~evleaale~~~g--~~pLI---nSat-----~en~~~i~~lA~~y~~~Vva~ 181 (319)
T PRK04452 135 PEKDAEVLEKVAEAAEG--ERCLL---GSAE-----EDNYKKIAAAAMAYGHAVIAW 181 (319)
T ss_pred CCCCHHHHHHHHHHhCC--CCCEE---EECC-----HHHHHHHHHHHHHhCCeEEEE
Confidence 35589999999876542 22322 2111 125999999999999987764
No 468
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=30.07 E-value=2.6e+02 Score=21.66 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=44.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCC--CcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGT--TGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~--t~~G~i~dl~~I~ 106 (367)
.+.++.+..+...+.++ .|+++..|+.. .+|. .++.+.+.... +-++++.++ ...+...|-..|.
T Consensus 27 Gf~i~AT~gTa~~L~~~---~Gi~v~~vk~~~~~g~---~~i~~~i~~g~------i~~VInt~~~~~~~~~~~dg~~iR 94 (115)
T cd01422 27 RHRLVATGTTGLLIQEA---TGLTVNRMKSGPLGGD---QQIGALIAEGE------IDAVIFFRDPLTAQPHEPDVKALL 94 (115)
T ss_pred CCEEEEechHHHHHHHh---hCCcEEEEecCCCCch---hHHHHHHHcCc------eeEEEEcCCCCCCCcccccHHHHH
Confidence 45666655444333331 58888878542 2343 44666665432 233344333 2233256889999
Q ss_pred HHHhhcCcEEEE
Q psy3048 107 PICQEYNIWLHV 118 (367)
Q Consensus 107 ~l~~~~gi~l~v 118 (367)
+.|-+|+++++.
T Consensus 95 r~a~~~~Ip~~T 106 (115)
T cd01422 95 RLCDVYNIPLAT 106 (115)
T ss_pred HHHHHcCCCEEE
Confidence 999999998764
No 469
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=29.97 E-value=75 Score=29.20 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=34.4
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhC-CCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAK-GLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~-~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~v 118 (367)
|.++++.+|.+.+++.++...++ |-.-+++..+.+....=..++-.++.+.+.+ ..+.+++
T Consensus 11 Pf~~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 11 PFDENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 44667888888888888777665 5443444444444433333445555554443 2355555
No 470
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=29.73 E-value=1.4e+02 Score=26.18 Aligned_cols=63 Identities=10% Similarity=0.067 Sum_probs=37.8
Q ss_pred HHHHhCCcceEEE-ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEE
Q psy3048 45 KSAIIGDVPVRQL-RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHV 118 (367)
Q Consensus 45 ~~~~~~g~~v~~v-~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~v 118 (367)
++++..|.++..+ +.+ .|.+...+.++...+++ +..|++..... +.+..+.+-|++.|++++.
T Consensus 22 ~~a~~~g~~~~~~~~~~----~d~~~q~~~i~~~i~~~--~d~Iiv~~~~~-----~~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 22 AAAKELGYEVEIVFDAQ----NDPEEQIEQIEQAISQG--VDGIIVSPVDP-----DSLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHTCEEEEEEEST----TTHHHHHHHHHHHHHTT--ESEEEEESSST-----TTTHHHHHHHHHTTSEEEE
T ss_pred HHHHHcCCEEEEeCCCC----CCHHHHHHHHHHHHHhc--CCEEEecCCCH-----HHHHHHHHHHhhcCceEEE
Confidence 3445578888886 433 25555555665555444 33555443322 2356777778999998766
No 471
>PLN00196 alpha-amylase; Provisional
Probab=29.35 E-value=34 Score=33.54 Aligned_cols=28 Identities=11% Similarity=-0.018 Sum_probs=25.8
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+..|.-++++++++-||++|+.+++|..
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4579999999999999999999999985
No 472
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=29.11 E-value=2.2e+02 Score=28.88 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=50.6
Q ss_pred cccCceEEEecCCcchhHHHHHHhCCc-ceEEEecCCCCCcCHHHHHHHHHH------HhhCCCccEEEEEecCCCcccc
Q psy3048 26 DIKSRLVAYASDQSNSSVEKSAIIGDV-PVRQLRSDDNGVLRGDALLTAVKE------DLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 26 ~~~~~~~v~~s~~~H~s~~~~~~~~g~-~v~~v~~~~~~~~d~~~L~~~l~~------~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
++.|+.+|++. ..++.+++|- ....+ ..-++|.+++-+.. ..++-..|.+|+++-=.+ =.
T Consensus 320 gl~P~~~VlVa------TvraLK~hgg~~~~~l-----~~en~Eal~sGl~NL~RHIenvr~FGvPvVVAINKFd~--DT 386 (557)
T PRK13505 320 GLKPDAVVIVA------TVRALKMHGGVAKDDL-----KEENVEALKKGFANLERHIENIRKFGVPVVVAINKFVT--DT 386 (557)
T ss_pred CCCCCEEEEEe------ehHHHHHcCCCChhhc-----cccCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--CC
Confidence 46777888774 4566777654 22222 12255555544332 234456677777774322 22
Q ss_pred cCChhhHHHHHhhcCcEEEEecccc
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
-..++.|.+.|++.|+.+.+=..|+
T Consensus 387 e~Ei~~I~~~c~e~Gv~va~~~~~~ 411 (557)
T PRK13505 387 DAEIAALKELCEELGVEVALSEVWA 411 (557)
T ss_pred HHHHHHHHHHHHHcCCCEEEecccc
Confidence 2478899999999999887665553
No 473
>PRK10785 maltodextrin glucosidase; Provisional
Probab=29.04 E-value=36 Score=35.02 Aligned_cols=27 Identities=19% Similarity=0.080 Sum_probs=24.0
Q ss_pred cccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 95 GTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 95 ~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..|..++++++++-||++|+.|++|..
T Consensus 221 ~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 221 QLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456678899999999999999999986
No 474
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=28.93 E-value=2.4e+02 Score=25.97 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=43.7
Q ss_pred HHhCCcceEEEecCC----CCCcCHHHHHHHHHHHhh-CCCccEEEEEecCCC--cccccCChhhHHHHHhhcC-cEEEE
Q psy3048 47 AIIGDVPVRQLRSDD----NGVLRGDALLTAVKEDLA-KGLIPCCLVATLGTT--GTCAFDNLEELGPICQEYN-IWLHV 118 (367)
Q Consensus 47 ~~~~g~~v~~v~~~~----~~~~d~~~L~~~l~~~~~-~~~~~~~vv~~~~~t--~~G~i~dl~~I~~l~~~~g-i~l~v 118 (367)
+...|+....+=+-- +-.-.++.+.+.+++... ++ ..+++.-+.+.. -...+..|++|.+++++.+ +-+.+
T Consensus 96 ~~~lG~~~lv~HpG~~~~~~~e~~l~~i~~~Ln~~~~~~~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCi 174 (280)
T COG0648 96 CEQLGAKLLVFHPGSYLGQGKEEGLNRIAEALNELLEEEG-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCI 174 (280)
T ss_pred HHHcCCcEEEECCccccCCCHHHHHHHHHHHHHHHhhccC-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEE
Confidence 345787766553321 111234555566655544 22 122222233322 1224689999999999987 99999
Q ss_pred ecccc
Q psy3048 119 DAAYA 123 (367)
Q Consensus 119 D~a~~ 123 (367)
|-||.
T Consensus 175 DtcH~ 179 (280)
T COG0648 175 DTCHA 179 (280)
T ss_pred Echhh
Confidence 99985
No 475
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=28.30 E-value=2.6e+02 Score=20.97 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=41.4
Q ss_pred ceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
..+||+.....++.. +.....|++...++.+.+ .+-.++.+.+.+.+.+...|.++ ..+ ...|..+|+.++
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~--~~~~~~~~~l~~~tg~~tvP~Vf--i~g-~~iGG~ddl~~l 81 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKE--PAGKDIENALSRLGCSPAVPAVF--VGG-KLVGGLENVMAL 81 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCC--ccHHHHHHHHHHhcCCCCcCeEE--ECC-EEEcCHHHHHHH
Confidence 567777766666642 223336787777777532 23455666776655555566543 333 456777776554
No 476
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=28.27 E-value=1.4e+02 Score=25.86 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=33.3
Q ss_pred HHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
=|.+++=..-.|..|..|+.... +..|...+.+++.++|++||++++
T Consensus 144 TEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 144 TEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred HHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 44455433445666766555543 458999999999999999999873
No 477
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=27.78 E-value=3.6e+02 Score=23.15 Aligned_cols=82 Identities=18% Similarity=0.136 Sum_probs=51.4
Q ss_pred CceEEEecCCcchhHHH-----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 29 SRLVAYASDQSNSSVEK-----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~-----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
++.++.+....+..+-. ..+..|.+|+.+-. ...++++.+++.+.. |.+|.++.. .+.....+.
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~----~~p~~~l~~~~~~~~-----~d~v~lS~~--~~~~~~~~~ 151 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGR----DVPPEEFVEAVKEHK-----PDILGLSAL--MTTTMGGMK 151 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCC----CCCHHHHHHHHHHcC-----CCEEEEecc--ccccHHHHH
Confidence 35555555555555422 23457888866543 357889988887654 456666642 233456788
Q ss_pred hHHHHHhhc----CcEEEEecc
Q psy3048 104 ELGPICQEY----NIWLHVDAA 121 (367)
Q Consensus 104 ~I~~l~~~~----gi~l~vD~a 121 (367)
++.+..++. ++.+++=|.
T Consensus 152 ~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 152 EVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred HHHHHHHHCCCCcCCeEEEECC
Confidence 888888875 467777764
No 478
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.60 E-value=2.1e+02 Score=21.77 Aligned_cols=56 Identities=13% Similarity=-0.031 Sum_probs=33.7
Q ss_pred chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEe--cCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVV--TSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~--~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+..+.++.+.|.+++.-. . -...-.+++|-.- ....+.++++|.+...|++.++..
T Consensus 10 d~da~~l~~~L~d~~fra-T-kLAsTGGFlkaGNTTfliGved~~vd~~~s~Ike~C~~r 67 (109)
T COG3870 10 DQDANELEDALTDKNFRA-T-KLASTGGFLKAGNTTFLIGVEDDRVDALRSLIKENCKSR 67 (109)
T ss_pred cccHHHHHHHHHhCCcee-E-EeeccCceeecCCeEEEEecccchhHHHHHHHHHHhhhH
Confidence 455788999888887321 1 1111123444210 013457899999999999987754
No 479
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion]
Probab=27.58 E-value=4.1e+02 Score=25.86 Aligned_cols=84 Identities=20% Similarity=0.236 Sum_probs=54.4
Q ss_pred cCceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc--ccCC
Q psy3048 28 KSRLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC--AFDN 101 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G--~i~d 101 (367)
..+.-+++.++--...++- +.++|+.++.+. ++++|..++..-... -.++|-|.|.+..- .+..
T Consensus 233 ~~kVaiITtDtYRIGA~EQLk~Ya~im~vp~~vv~-------~~~el~~ai~~l~~~---d~ILVDTaGrs~~D~~~i~e 302 (407)
T COG1419 233 KKKVAIITTDTYRIGAVEQLKTYADIMGVPLEVVY-------SPKELAEAIEALRDC---DVILVDTAGRSQYDKEKIEE 302 (407)
T ss_pred CcceEEEEeccchhhHHHHHHHHHHHhCCceEEec-------CHHHHHHHHHHhhcC---CEEEEeCCCCCccCHHHHHH
Confidence 4578888888776665444 556888888775 788899888765532 14666777766432 2245
Q ss_pred hhhHHHHHhhcCcEEEEecc
Q psy3048 102 LEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a 121 (367)
++++.+.++.-..++.+++.
T Consensus 303 l~~~~~~~~~i~~~Lvlsat 322 (407)
T COG1419 303 LKELIDVSHSIEVYLVLSAT 322 (407)
T ss_pred HHHHHhccccceEEEEEecC
Confidence 55556666555666677653
No 480
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=27.39 E-value=42 Score=34.14 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=26.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 73 id~~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 73 IDPTYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345567888999999999999999999985
No 481
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=27.26 E-value=44 Score=35.30 Aligned_cols=30 Identities=10% Similarity=0.114 Sum_probs=25.9
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
++..|..++++++++-||++|+.|++|-.+
T Consensus 293 ~~~~Gtp~dlk~LVd~aH~~GI~VilDvV~ 322 (758)
T PLN02447 293 SSRSGTPEDLKYLIDKAHSLGLRVLMDVVH 322 (758)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345677789999999999999999999865
No 482
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=27.24 E-value=1.1e+02 Score=24.94 Aligned_cols=57 Identities=16% Similarity=0.096 Sum_probs=36.8
Q ss_pred HHHhCCcceEEEecCCCCCcCH-HHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCc
Q psy3048 46 SAIIGDVPVRQLRSDDNGVLRG-DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNI 114 (367)
Q Consensus 46 ~~~~~g~~v~~v~~~~~~~~d~-~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi 114 (367)
+.+-.|.+|+...... .+ |.+.++++++.. .|.++ +..-|..+.+.++.+.|+++|+
T Consensus 35 ~l~d~GfeVi~~g~~~----tp~e~v~aA~~~dv~------vIgvS--sl~g~h~~l~~~lve~lre~G~ 92 (143)
T COG2185 35 ALADAGFEVINLGLFQ----TPEEAVRAAVEEDVD------VIGVS--SLDGGHLTLVPGLVEALREAGV 92 (143)
T ss_pred HHHhCCceEEecCCcC----CHHHHHHHHHhcCCC------EEEEE--eccchHHHHHHHHHHHHHHhCC
Confidence 3344788887766532 34 445555666553 44444 3445666889999999999986
No 483
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=27.04 E-value=3.2e+02 Score=21.63 Aligned_cols=63 Identities=19% Similarity=0.074 Sum_probs=39.2
Q ss_pred CCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 37 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 37 ~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+.+.+.+...++..|.++....+-.| |++++++++++..+. .-+|+.+ +-+..|..|-..+..
T Consensus 18 d~n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~---~Dlvitt-GG~g~g~~D~t~~ai 80 (133)
T cd00758 18 DTNGPALEALLEDLGCEVIYAGVVPD---DADSIRAALIEASRE---ADLVLTT-GGTGVGRRDVTPEAL 80 (133)
T ss_pred EchHHHHHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhc---CCEEEEC-CCCCCCCCcchHHHH
Confidence 44555666667778988877654333 788888888765432 1355555 446667666554443
No 484
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=27.03 E-value=2.9e+02 Score=22.25 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=40.3
Q ss_pred CCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 37 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 37 ~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+.+-+.+...++..|+++.....-.| |.++|.+++++..++ .-+|+.+ +-+..|.-|-..+..+
T Consensus 26 d~n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 26 DSNGPLLAALLEEAGFNVSRLGIVPD---DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred eCcHHHHHHHHHHCCCeEEEEeecCC---CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 45666677777788999887765333 778888888765432 2355555 4465676655444433
No 485
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=26.91 E-value=1.9e+02 Score=19.08 Aligned_cols=51 Identities=16% Similarity=0.052 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhcCCCCeEEeC-CCCceeEEEEEcCCchHHHHHHHHHhccC
Q psy3048 258 HISLAKKFADLVEKDDRFELVC-PPSMGLVCFRLKGDNDLTNQLYERLMSHK 308 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g 308 (367)
+...++.+.+.|.+++|+.-.. ....+.+.+.+.+......++.+.+.+.|
T Consensus 9 C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~G 60 (62)
T PF00403_consen 9 CEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAG 60 (62)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhC
Confidence 3455677788888889975332 33446666666543222467777777665
No 486
>KOG3974|consensus
Probab=26.80 E-value=57 Score=29.58 Aligned_cols=24 Identities=13% Similarity=0.195 Sum_probs=20.2
Q ss_pred cccCChhhHHHHHhhcCcEEEEec
Q psy3048 97 CAFDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 97 G~i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
+....+++|.+++++.++++++|+
T Consensus 116 ~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 116 AILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEcC
Confidence 344567899999999999999995
No 487
>PRK09505 malS alpha-amylase; Reviewed
Probab=26.72 E-value=44 Score=34.93 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=24.0
Q ss_pred cccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 95 GTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 95 ~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..|..++++++++-||++|+.|++|..
T Consensus 287 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 287 NMGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456678899999999999999999985
No 488
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=26.38 E-value=1.4e+02 Score=26.13 Aligned_cols=57 Identities=12% Similarity=-0.058 Sum_probs=38.3
Q ss_pred CcCHHHHHHHHHHHhhCCC-ccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 64 VLRGDALLTAVKEDLAKGL-IPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 64 ~~d~~~L~~~l~~~~~~~~-~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.+++++|.+.+.++..=.. .-..|.++.+.. +=+.+-+.++.+.||+.|+.+.+|.+
T Consensus 18 ~~t~eel~~~~~~~~~f~~~sggGVt~SGGEP-llq~~fl~~l~~~~k~~gi~~~leTn 75 (213)
T PRK10076 18 DITLDALEREVMKDDIFFRTSGGGVTLSGGEV-LMQAEFATRFLQRLRLWGVSCAIETA 75 (213)
T ss_pred ccCHHHHHHHHHhhhHhhcCCCCEEEEeCchH-HcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3788999888776521000 012677776654 33444478999999999999999955
No 489
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=26.21 E-value=1.2e+02 Score=28.34 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=34.1
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
+|.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.+ .++++++=
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~G 83 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVG 83 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 37788888888887776665444445555555544445556666665543 23555543
No 490
>PLN02361 alpha-amylase
Probab=26.06 E-value=46 Score=32.37 Aligned_cols=29 Identities=17% Similarity=0.142 Sum_probs=26.6
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.+..|..++++++++-||++|+.+++|..
T Consensus 69 ~~~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 69 NSAYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 46689999999999999999999999985
No 491
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=25.37 E-value=1.5e+02 Score=24.79 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=33.0
Q ss_pred ceEEEec-CCcchhHHHHHHhCCcceEEEecCCC----CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc
Q psy3048 30 RLVAYAS-DQSNSSVEKSAIIGDVPVRQLRSDDN----GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF 99 (367)
Q Consensus 30 ~~~v~~s-~~~H~s~~~~~~~~g~~v~~v~~~~~----~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i 99 (367)
+.+|..+ +.-.......++..|+++..++.... ..++.+.+.++++--......|++|.-.+|...||.+
T Consensus 34 KTII~L~~e~~~~~~~~f~~~~~I~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 34 KTIINLRPEPPSQDFLEFAEENGIKLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp SEEEE--SS---HHHHHHHHHTT-EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred ceEEEecCCCCCHHHHHHHhhcCceEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 3444433 32334445556678888888777422 3466777777765322222348888888888888875
No 492
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; PDB: 3M49_B 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 3HYL_A 3RIM_A ....
Probab=25.25 E-value=1.9e+02 Score=27.41 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=26.8
Q ss_pred HHhCCcceEEE-ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEe
Q psy3048 47 AIIGDVPVRQL-RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVAT 90 (367)
Q Consensus 47 ~~~~g~~v~~v-~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~ 90 (367)
.+..|.+|++| +-+ |+++|.++++...+....|.+|++.
T Consensus 202 ~~a~Gw~v~~v~dGh-----d~~~i~~A~~~a~~~~~kP~~Ii~~ 241 (332)
T PF00456_consen 202 FEAFGWNVIEVCDGH-----DVEAIYAAIEEAKASKGKPTVIIAR 241 (332)
T ss_dssp HHHTT-EEEEEEETT-----BHHHHHHHHHHHHHSTSS-EEEEEE
T ss_pred HHHhhhhhcccccCc-----HHHHHHHHHHHHHhcCCCCceeecc
Confidence 34579999998 322 8999999998776554568766665
No 493
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=25.20 E-value=2.1e+02 Score=24.20 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=34.3
Q ss_pred CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 63 GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 63 ~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
-.+.++.+.+.|++..+ |++++...... .-+-.+++.+++++.+++++.=.-
T Consensus 20 ~~~~p~~aa~lI~~AKr----PlIivG~ga~~---~~ea~e~l~elaEkl~iPVvtT~~ 71 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKR----PLLVVGSLLLD---DEELLDRAVKIAKKANIPVAATGG 71 (171)
T ss_pred cccCHHHHHHHHHhCCC----cEEEECcCccc---cchHHHHHHHHHHHHCCCEEEccc
Confidence 44578888888876543 65554433321 123477899999999999886653
No 494
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=24.65 E-value=5.3e+02 Score=23.74 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=47.7
Q ss_pred EEEecCCcchhHHHHHHhC-CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC-C--------
Q psy3048 32 VAYASDQSNSSVEKSAIIG-DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD-N-------- 101 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~-g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~-d-------- 101 (367)
++++...+.....-..... +.++..+...+-=-.|++.+++.+++.. |-+|+-+...+..-..+ +
T Consensus 3 iLi~G~~GqLG~~L~~~l~~~~~v~a~~~~~~Ditd~~~v~~~i~~~~-----PDvVIn~AAyt~vD~aE~~~e~A~~vN 77 (281)
T COG1091 3 ILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRETR-----PDVVINAAAYTAVDKAESEPELAFAVN 77 (281)
T ss_pred EEEEcCCChHHHHHHHHhCCCceEEeccCccccccChHHHHHHHHhhC-----CCEEEECccccccccccCCHHHHHHhH
Confidence 4455556666654443333 2445444332212337788888887753 56777777666554442 2
Q ss_pred ---hhhHHHHHhhcCcEE
Q psy3048 102 ---LEELGPICQEYNIWL 116 (367)
Q Consensus 102 ---l~~I~~l~~~~gi~l 116 (367)
...|+++|++.|+++
T Consensus 78 a~~~~~lA~aa~~~ga~l 95 (281)
T COG1091 78 ATGAENLARAAAEVGARL 95 (281)
T ss_pred HHHHHHHHHHHHHhCCeE
Confidence 246888999999876
No 495
>PF13783 DUF4177: Domain of unknown function (DUF4177)
Probab=24.51 E-value=1.5e+02 Score=19.96 Aligned_cols=33 Identities=12% Similarity=-0.020 Sum_probs=24.2
Q ss_pred ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccE
Q psy3048 53 PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPC 85 (367)
Q Consensus 53 ~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~ 85 (367)
+++.++......++.+++++.|++..++|+..+
T Consensus 5 k~v~~~~~~~~~~~~~~~~~~Ln~~g~eGWeLV 37 (61)
T PF13783_consen 5 KVVEVPTGGFFGIDPEDLEEILNEYGKEGWELV 37 (61)
T ss_pred EEEEEecccccCCCHHHHHHHHHHHHhCCcEEE
Confidence 345555443344789999999999999998744
No 496
>PRK14706 glycogen branching enzyme; Provisional
Probab=24.49 E-value=51 Score=34.19 Aligned_cols=30 Identities=13% Similarity=-0.016 Sum_probs=25.6
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
+...|..++++++++-||+.|+.|++|-.+
T Consensus 210 ~~~~g~~~~~~~lv~~~H~~gi~VilD~v~ 239 (639)
T PRK14706 210 TSRLGTPEDFKYLVNHLHGLGIGVILDWVP 239 (639)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445577789999999999999999999764
No 497
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=24.46 E-value=1.2e+02 Score=27.82 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=27.7
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
|+++ +.+|.+.+++.++...++|-.-+++..+.+....=..++-.++.+.+.+
T Consensus 11 Pf~~-g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~ 63 (279)
T cd00953 11 PFTG-NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSD 63 (279)
T ss_pred CcCC-CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHH
Confidence 3344 6777777777776665555333444444444443344445555544433
No 498
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=24.32 E-value=3.2e+02 Score=20.79 Aligned_cols=67 Identities=16% Similarity=0.089 Sum_probs=42.8
Q ss_pred HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc--CcEEEEeccccc
Q psy3048 47 AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAYAG 124 (367)
Q Consensus 47 ~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~--gi~l~vD~a~~~ 124 (367)
.+..|.+++.+..+ ...+++.+.+.+.. |.+|.++..... ....++.+.++.++. ++.+++=|.+..
T Consensus 23 l~~~G~~v~~l~~~----~~~~~~~~~i~~~~-----pdiV~iS~~~~~--~~~~~~~~~~~~~~~p~~~~ivvGG~~~t 91 (125)
T cd02065 23 LRDNGFEVIDLGVD----VPPEEIVEAAKEED-----ADVVGLSALSTT--HMEAMKLVIEALKELGIDIPVVVGGAHPT 91 (125)
T ss_pred HHHCCCEEEEcCCC----CCHHHHHHHHHHcC-----CCEEEEecchHh--HHHHHHHHHHHHHhcCCCCeEEEeCCcCC
Confidence 44578888877543 36677777766532 557766643332 224567777777776 589998887644
No 499
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=24.19 E-value=50 Score=33.53 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=25.4
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.+++|..
T Consensus 68 d~~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 68 NPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34567888999999999999999999975
No 500
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=23.93 E-value=1.9e+02 Score=23.63 Aligned_cols=54 Identities=20% Similarity=0.077 Sum_probs=38.6
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh-HHHHH----hhcCcEE-EEecccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE-LGPIC----QEYNIWL-HVDAAYA 123 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~-I~~l~----~~~gi~l-~vD~a~~ 123 (367)
.+.+.|.+.+++.. +..|++-.|.|+.|...+..+ +.+++ +++++++ ++|+-.+
T Consensus 40 ~~~~~l~~li~~~~-----~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQ-----VDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhC-----CCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 68999999998875 568999999999999887542 33333 3466654 6776543
Done!