Query psy3048
Match_columns 367
No_of_seqs 124 out of 1688
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 00:21:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 2.8E-46 9.7E-51 369.0 33.9 321 1-352 159-479 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 2.6E-46 8.9E-51 368.6 30.6 321 1-353 153-473 (475)
3 1js3_A DDC;, DOPA decarboxylas 100.0 5.4E-42 1.9E-46 338.9 31.9 325 2-355 154-478 (486)
4 3vp6_A Glutamate decarboxylase 100.0 1.9E-40 6.5E-45 329.5 34.6 317 2-352 169-506 (511)
5 2okj_A Glutamate decarboxylase 100.0 2.6E-38 8.7E-43 314.0 33.9 314 2-351 166-502 (504)
6 2qma_A Diaminobutyrate-pyruvat 100.0 2.5E-38 8.7E-43 313.5 33.1 314 2-351 173-496 (497)
7 2jis_A Cysteine sulfinic acid 100.0 2.6E-37 8.8E-42 307.5 33.4 315 2-350 180-514 (515)
8 3hbx_A GAD 1, glutamate decarb 100.0 4.5E-34 1.6E-38 283.1 26.9 302 2-355 132-448 (502)
9 2dgk_A GAD-beta, GADB, glutama 100.0 1.2E-33 4.2E-38 276.5 24.7 299 2-354 118-437 (452)
10 3mc6_A Sphingosine-1-phosphate 100.0 2.2E-29 7.4E-34 249.2 20.4 271 30-354 158-440 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 1.9E-28 6.4E-33 243.6 25.3 273 30-355 192-473 (514)
12 2z67_A O-phosphoseryl-tRNA(SEC 100.0 8.3E-28 2.8E-32 235.5 20.3 261 31-348 177-455 (456)
13 3f9t_A TDC, L-tyrosine decarbo 100.0 5.2E-26 1.8E-30 217.0 27.7 261 30-349 123-396 (397)
14 3bc8_A O-phosphoseryl-tRNA(SEC 99.9 8.2E-26 2.8E-30 217.6 20.2 267 32-353 146-445 (450)
15 3nnk_A Ureidoglycine-glyoxylat 99.9 2.8E-25 9.6E-30 213.6 23.0 295 29-355 87-394 (411)
16 3isl_A Purine catabolism prote 99.9 4.4E-25 1.5E-29 212.6 20.5 290 30-355 86-394 (416)
17 3e9k_A Kynureninase; kynurenin 99.9 1.9E-24 6.5E-29 211.9 25.0 284 29-351 154-461 (465)
18 4hvk_A Probable cysteine desul 99.9 4.7E-24 1.6E-28 202.4 25.6 263 29-353 87-375 (382)
19 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 1.2E-24 4E-29 207.1 20.7 274 31-358 163-468 (501)
20 3zrp_A Serine-pyruvate aminotr 99.9 3E-24 1E-28 204.2 23.0 283 30-356 77-368 (384)
21 2yrr_A Aminotransferase, class 99.9 3.3E-24 1.1E-28 201.5 21.0 269 32-350 76-352 (353)
22 3kgw_A Alanine-glyoxylate amin 99.9 3.5E-24 1.2E-28 204.4 21.0 284 30-353 98-390 (393)
23 2dr1_A PH1308 protein, 386AA l 99.9 7.2E-24 2.5E-28 201.9 22.5 277 30-352 95-380 (386)
24 2huf_A Alanine glyoxylate amin 99.9 4.5E-24 1.5E-28 204.1 21.0 282 30-354 94-386 (393)
25 1m32_A 2-aminoethylphosphonate 99.9 1.3E-23 4.6E-28 198.3 23.9 279 29-350 80-364 (366)
26 1kmj_A Selenocysteine lyase; p 99.9 3E-23 1E-27 198.8 25.4 279 30-351 113-405 (406)
27 1wyu_B Glycine dehydrogenase s 99.9 1.7E-23 5.9E-28 205.8 23.8 275 30-350 156-440 (474)
28 1t3i_A Probable cysteine desul 99.9 4.5E-23 1.5E-27 198.6 26.2 280 30-353 118-415 (420)
29 4eb5_A Probable cysteine desul 99.9 3.8E-23 1.3E-27 196.6 24.5 262 30-353 88-375 (382)
30 2z9v_A Aspartate aminotransfer 99.9 1.8E-23 6.2E-28 199.8 22.3 278 31-353 84-373 (392)
31 3ffr_A Phosphoserine aminotran 99.9 6.7E-24 2.3E-28 200.2 17.3 269 32-348 85-361 (362)
32 3lvm_A Cysteine desulfurase; s 99.9 1.5E-22 5E-27 195.5 26.1 263 30-353 113-401 (423)
33 1vjo_A Alanine--glyoxylate ami 99.9 3.1E-23 1.1E-27 198.3 19.0 273 30-348 109-392 (393)
34 2ch1_A 3-hydroxykynurenine tra 99.9 5.7E-23 1.9E-27 196.6 20.8 281 31-354 94-386 (396)
35 1elu_A L-cysteine/L-cystine C- 99.9 9.3E-23 3.2E-27 194.4 21.6 276 29-347 100-388 (390)
36 1eg5_A Aminotransferase; PLP-d 99.9 4E-22 1.4E-26 189.5 25.4 262 30-353 89-378 (384)
37 1iug_A Putative aspartate amin 99.9 5.2E-23 1.8E-27 193.5 18.6 268 30-351 75-348 (352)
38 2bkw_A Alanine-glyoxylate amin 99.9 1E-22 3.6E-27 193.8 20.8 276 30-350 87-383 (385)
39 3e77_A Phosphoserine aminotran 99.9 8.6E-24 3E-28 200.9 13.1 259 33-350 106-374 (377)
40 3f0h_A Aminotransferase; RER07 99.9 1.2E-22 4E-27 193.0 20.8 271 30-350 96-373 (376)
41 3cai_A Possible aminotransfera 99.9 2.6E-22 9E-27 192.7 21.0 261 30-347 113-405 (406)
42 3vax_A Putative uncharacterize 99.9 6E-23 2E-27 196.7 16.4 263 32-350 111-399 (400)
43 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.5E-22 8.7E-27 190.3 19.5 263 30-351 93-370 (371)
44 3tqx_A 2-amino-3-ketobutyrate 99.9 1.6E-21 5.6E-26 186.5 24.5 265 30-352 127-397 (399)
45 1qz9_A Kynureninase; kynurenin 99.9 9.9E-22 3.4E-26 189.3 23.0 270 30-351 119-402 (416)
46 3ke3_A Putative serine-pyruvat 99.9 1.2E-21 4.2E-26 187.0 20.1 275 32-352 76-377 (379)
47 3m5u_A Phosphoserine aminotran 99.9 5.9E-22 2E-26 187.5 16.4 255 32-350 97-359 (361)
48 1wyu_A Glycine dehydrogenase ( 99.9 2.5E-21 8.7E-26 188.3 21.4 274 30-348 150-437 (438)
49 2w8t_A SPT, serine palmitoyltr 99.9 1.6E-20 5.4E-25 182.1 25.5 264 30-354 148-418 (427)
50 3qm2_A Phosphoserine aminotran 99.9 2.7E-22 9.2E-27 191.5 12.1 251 38-350 123-384 (386)
51 1fc4_A 2-amino-3-ketobutyrate 99.9 1.9E-20 6.6E-25 179.5 24.6 262 31-352 130-398 (401)
52 3dzz_A Putative pyridoxal 5'-p 99.9 3E-21 1E-25 184.1 18.1 265 30-351 109-389 (391)
53 2vyc_A Biodegradative arginine 99.9 6E-21 2.1E-25 196.8 21.5 271 30-352 245-606 (755)
54 2fnu_A Aminotransferase; prote 99.9 3.2E-21 1.1E-25 183.0 17.9 271 30-352 74-373 (375)
55 3nra_A Aspartate aminotransfer 99.9 3E-21 1E-25 185.2 16.5 262 30-352 126-406 (407)
56 3a9z_A Selenocysteine lyase; P 99.9 8.7E-21 3E-25 183.8 19.5 267 30-353 123-430 (432)
57 1b9h_A AHBA synthase, protein 99.9 2.6E-20 8.9E-25 177.9 21.2 269 30-350 78-387 (388)
58 1v72_A Aldolase; PLP-dependent 99.9 4.3E-21 1.5E-25 180.6 14.9 262 29-351 82-353 (356)
59 1j32_A Aspartate aminotransfer 99.9 6.5E-21 2.2E-25 182.0 15.6 261 30-351 114-387 (388)
60 3euc_A Histidinol-phosphate am 99.9 2.4E-20 8.2E-25 176.7 19.2 247 31-348 110-365 (367)
61 3uwc_A Nucleotide-sugar aminot 99.8 1.5E-20 5.2E-25 178.4 17.4 263 30-350 78-370 (374)
62 1svv_A Threonine aldolase; str 99.8 3.2E-20 1.1E-24 174.7 18.8 261 29-350 89-357 (359)
63 3a2b_A Serine palmitoyltransfe 99.8 7.8E-20 2.7E-24 175.2 21.6 260 30-352 127-393 (398)
64 1rv3_A Serine hydroxymethyltra 99.8 5.8E-21 2E-25 188.1 13.5 273 30-350 134-430 (483)
65 3op7_A Aminotransferase class 99.8 8.6E-20 2.9E-24 173.4 20.8 260 30-353 105-373 (375)
66 3dr4_A Putative perosamine syn 99.8 5.5E-21 1.9E-25 182.9 12.6 264 30-347 96-389 (391)
67 2bwn_A 5-aminolevulinate synth 99.8 8.6E-20 3E-24 175.0 20.8 260 31-351 133-400 (401)
68 1xi9_A Putative transaminase; 99.8 3E-20 1E-24 178.6 17.6 260 30-352 125-404 (406)
69 3kki_A CAI-1 autoinducer synth 99.8 4E-19 1.4E-23 171.0 24.9 255 30-351 143-404 (409)
70 3ftb_A Histidinol-phosphate am 99.8 3.8E-19 1.3E-23 167.8 24.2 251 32-350 100-360 (361)
71 3frk_A QDTB; aminotransferase, 99.8 8.8E-21 3E-25 180.3 13.0 262 30-350 76-367 (373)
72 1c4k_A Protein (ornithine deca 99.8 3.5E-20 1.2E-24 189.7 18.0 278 30-352 213-567 (730)
73 3ffh_A Histidinol-phosphate am 99.8 1.7E-19 5.9E-24 170.5 20.9 250 30-347 108-362 (363)
74 1bs0_A Protein (8-amino-7-oxon 99.8 2.7E-19 9.3E-24 170.5 21.8 255 30-347 123-383 (384)
75 4dq6_A Putative pyridoxal phos 99.8 5E-20 1.7E-24 175.7 16.2 260 30-348 114-390 (391)
76 2zyj_A Alpha-aminodipate amino 99.8 1.5E-19 5.2E-24 173.2 19.5 262 31-352 116-394 (397)
77 1o69_A Aminotransferase; struc 99.8 3.6E-19 1.2E-23 170.6 22.1 268 30-349 72-385 (394)
78 3ly1_A Putative histidinol-pho 99.8 2.5E-19 8.5E-24 168.7 20.6 250 31-350 93-351 (354)
79 2x3l_A ORN/Lys/Arg decarboxyla 99.8 1.6E-20 5.3E-25 183.3 12.6 252 30-352 96-354 (446)
80 3piu_A 1-aminocyclopropane-1-c 99.8 6.2E-19 2.1E-23 171.1 23.7 270 30-352 135-433 (435)
81 1iay_A ACC synthase 2, 1-amino 99.8 2.7E-19 9.2E-24 173.2 21.0 266 31-350 133-426 (428)
82 3dyd_A Tyrosine aminotransfera 99.8 1.2E-19 4.1E-24 175.9 18.4 266 30-352 142-425 (427)
83 1bw0_A TAT, protein (tyrosine 99.8 1.2E-19 4.1E-24 174.8 18.3 269 30-353 128-415 (416)
84 3g0t_A Putative aminotransfera 99.8 1E-19 3.6E-24 176.4 17.9 275 32-350 135-436 (437)
85 3l8a_A METC, putative aminotra 99.8 6.1E-20 2.1E-24 177.5 15.9 263 30-349 143-420 (421)
86 2c81_A Glutamine-2-deoxy-scyll 99.8 2.3E-19 7.7E-24 173.3 19.7 281 30-351 82-414 (418)
87 2gb3_A Aspartate aminotransfer 99.8 5.3E-20 1.8E-24 177.2 15.2 260 30-353 126-404 (409)
88 2zc0_A Alanine glyoxylate tran 99.8 8.8E-20 3E-24 175.2 16.4 267 31-352 123-405 (407)
89 1gd9_A Aspartate aminotransfer 99.8 1E-19 3.5E-24 173.7 16.2 262 30-351 111-386 (389)
90 2dkj_A Serine hydroxymethyltra 99.8 6.7E-20 2.3E-24 175.9 14.9 261 30-350 109-387 (407)
91 1o4s_A Aspartate aminotransfer 99.8 7.8E-20 2.7E-24 174.8 15.4 253 30-349 125-387 (389)
92 1c7n_A Cystalysin; transferase 99.8 2E-19 7E-24 172.2 17.6 265 30-353 113-395 (399)
93 1vp4_A Aminotransferase, putat 99.8 2.9E-19 1E-23 172.9 18.9 270 30-354 133-421 (425)
94 1v2d_A Glutamine aminotransfer 99.8 9.1E-20 3.1E-24 173.7 15.0 257 30-353 102-373 (381)
95 3get_A Histidinol-phosphate am 99.8 4.4E-19 1.5E-23 167.9 19.6 249 30-348 106-364 (365)
96 3fdb_A Beta C-S lyase, putativ 99.8 1.8E-19 6.2E-24 171.0 16.7 258 31-350 106-375 (377)
97 2c0r_A PSAT, phosphoserine ami 99.8 1.5E-19 5.2E-24 170.9 15.7 257 30-351 93-361 (362)
98 3kax_A Aminotransferase, class 99.8 4.2E-19 1.4E-23 168.8 18.5 259 30-348 106-382 (383)
99 1w23_A Phosphoserine aminotran 99.8 3.2E-20 1.1E-24 175.1 10.7 258 31-350 95-359 (360)
100 3cq5_A Histidinol-phosphate am 99.8 2.9E-18 1E-22 162.6 24.3 249 30-349 116-366 (369)
101 1u08_A Hypothetical aminotrans 99.8 2.8E-19 9.6E-24 170.6 15.9 256 30-346 115-385 (386)
102 1d2f_A MALY protein; aminotran 99.8 9.5E-19 3.2E-23 167.1 19.5 263 31-351 112-389 (390)
103 3aow_A Putative uncharacterize 99.8 1.6E-18 5.4E-23 169.1 20.8 270 30-353 164-447 (448)
104 2cb1_A O-acetyl homoserine sul 99.8 1.7E-18 5.8E-23 167.1 20.4 267 30-346 95-411 (412)
105 2o0r_A RV0858C (N-succinyldiam 99.8 1.2E-19 4.2E-24 174.7 12.4 262 30-352 110-397 (411)
106 1mdo_A ARNB aminotransferase; 99.8 8.6E-19 2.9E-23 167.4 18.1 275 30-351 79-386 (393)
107 2vi8_A Serine hydroxymethyltra 99.8 3.3E-19 1.1E-23 170.9 15.2 262 30-352 109-388 (405)
108 1jg8_A L-ALLO-threonine aldola 99.8 3.6E-19 1.2E-23 167.2 14.5 257 31-350 78-345 (347)
109 3ju7_A Putative PLP-dependent 99.8 7.3E-19 2.5E-23 167.7 16.3 264 30-350 78-374 (377)
110 1fg7_A Histidinol phosphate am 99.8 3E-18 1E-22 162.0 20.5 245 31-347 101-354 (356)
111 2oga_A Transaminase; PLP-depen 99.8 1.3E-18 4.4E-23 167.0 18.1 264 30-351 103-396 (399)
112 2dou_A Probable N-succinyldiam 99.8 8.7E-19 3E-23 166.6 16.7 257 30-348 111-375 (376)
113 2x5f_A Aspartate_tyrosine_phen 99.8 4.2E-18 1.4E-22 164.9 21.5 266 31-351 138-429 (430)
114 1b5p_A Protein (aspartate amin 99.8 9.3E-19 3.2E-23 167.1 16.7 258 30-349 115-383 (385)
115 3ele_A Amino transferase; RER0 99.8 1.3E-18 4.6E-23 166.4 16.8 257 31-352 125-397 (398)
116 2z61_A Probable aspartate amin 99.8 6.7E-19 2.3E-23 167.0 14.4 248 30-349 113-369 (370)
117 2a7v_A Serine hydroxymethyltra 99.8 7.9E-18 2.7E-22 165.2 22.4 263 29-350 143-440 (490)
118 2o1b_A Aminotransferase, class 99.8 8.1E-19 2.8E-23 168.8 14.8 259 31-350 134-402 (404)
119 1yiz_A Kynurenine aminotransfe 99.8 9.7E-19 3.3E-23 169.3 15.4 258 31-348 126-426 (429)
120 3h14_A Aminotransferase, class 99.8 2.6E-18 8.9E-23 164.1 18.2 256 31-352 116-383 (391)
121 2fyf_A PSAT, phosphoserine ami 99.8 8.3E-19 2.9E-23 168.2 14.6 260 33-350 123-397 (398)
122 3n0l_A Serine hydroxymethyltra 99.8 9.1E-18 3.1E-22 161.5 21.7 262 30-351 111-389 (417)
123 1lc5_A COBD, L-threonine-O-3-p 99.8 3.4E-18 1.1E-22 161.9 18.4 251 32-351 100-360 (364)
124 2x5d_A Probable aminotransfera 99.8 1.3E-18 4.4E-23 167.6 15.1 263 30-352 123-399 (412)
125 2po3_A 4-dehydrase; external a 99.8 8.3E-18 2.8E-22 162.6 20.5 264 31-351 91-386 (424)
126 3b8x_A WBDK, pyridoxamine 5-ph 99.8 5.3E-18 1.8E-22 162.1 18.7 271 30-344 80-389 (390)
127 1pff_A Methionine gamma-lyase; 99.8 1.9E-18 6.5E-23 161.4 15.0 122 31-170 38-166 (331)
128 1cs1_A CGS, protein (cystathio 99.8 4.3E-17 1.5E-21 155.6 24.6 243 30-347 91-383 (386)
129 1qgn_A Protein (cystathionine 99.8 1.2E-17 4.1E-22 162.4 20.7 245 31-350 154-444 (445)
130 3qhx_A Cystathionine gamma-syn 99.8 1.3E-17 4.3E-22 160.0 20.5 244 30-344 105-391 (392)
131 3gbx_A Serine hydroxymethyltra 99.8 8.8E-18 3E-22 161.6 19.4 263 30-351 116-396 (420)
132 3fvs_A Kynurenine--oxoglutarat 99.8 2.5E-18 8.5E-23 165.8 15.6 262 30-350 115-421 (422)
133 1e5e_A MGL, methionine gamma-l 99.8 3.1E-17 1.1E-21 157.9 22.7 245 31-353 102-397 (404)
134 3lws_A Aromatic amino acid bet 99.8 7.5E-18 2.6E-22 158.9 18.0 251 32-347 90-355 (357)
135 3p1t_A Putative histidinol-pho 99.8 1.5E-17 5.2E-22 155.3 19.6 244 30-349 90-335 (337)
136 2r2n_A Kynurenine/alpha-aminoa 99.8 4.6E-17 1.6E-21 157.5 23.3 267 30-351 132-424 (425)
137 3ecd_A Serine hydroxymethyltra 99.8 3.4E-17 1.1E-21 157.8 22.2 263 30-351 118-397 (425)
138 3nyt_A Aminotransferase WBPE; 99.8 1.1E-18 3.7E-23 165.6 11.4 257 30-347 75-360 (367)
139 2rfv_A Methionine gamma-lyase; 99.8 1.6E-17 5.4E-22 159.4 19.1 119 30-166 103-227 (398)
140 3tcm_A Alanine aminotransferas 99.8 1.8E-17 6.3E-22 163.8 19.9 271 29-352 181-495 (500)
141 1gc0_A Methionine gamma-lyase; 99.8 3.8E-17 1.3E-21 156.8 21.4 245 30-347 104-397 (398)
142 3hdo_A Histidinol-phosphate am 99.8 1.4E-17 4.9E-22 157.3 17.0 246 31-350 107-354 (360)
143 3b46_A Aminotransferase BNA3; 99.8 3.5E-18 1.2E-22 166.5 12.3 260 30-347 142-443 (447)
144 3ezs_A Aminotransferase ASPB; 99.8 1.7E-17 5.8E-22 157.5 16.5 250 31-350 109-374 (376)
145 3pj0_A LMO0305 protein; struct 99.7 4.8E-17 1.6E-21 153.3 19.0 253 31-347 90-358 (359)
146 3jtx_A Aminotransferase; NP_28 99.7 2.6E-17 9E-22 157.2 17.3 254 31-348 121-395 (396)
147 2ez2_A Beta-tyrosinase, tyrosi 99.7 7.2E-17 2.5E-21 157.4 20.6 266 34-352 116-432 (456)
148 2ctz_A O-acetyl-L-homoserine s 99.7 4.2E-17 1.4E-21 157.8 18.8 270 30-348 97-420 (421)
149 3ri6_A O-acetylhomoserine sulf 99.7 2.7E-17 9.4E-22 159.3 17.4 263 30-348 121-429 (430)
150 1ibj_A CBL, cystathionine beta 99.7 1.3E-17 4.5E-22 163.1 15.1 120 31-168 172-297 (464)
151 3rq1_A Aminotransferase class 99.7 1.1E-16 3.7E-21 154.3 20.9 262 30-352 126-416 (418)
152 3cog_A Cystathionine gamma-lya 99.7 2.4E-17 8.2E-22 158.6 15.4 121 31-169 106-233 (403)
153 1ax4_A Tryptophanase; tryptoph 99.7 4.3E-17 1.5E-21 159.4 17.4 269 33-352 125-442 (467)
154 3e2y_A Kynurenine-oxoglutarate 99.7 1.3E-17 4.5E-22 160.1 13.3 258 30-346 109-408 (410)
155 3ez1_A Aminotransferase MOCR f 99.7 1.1E-16 3.8E-21 154.4 19.9 264 31-352 125-416 (423)
156 1vef_A Acetylornithine/acetyl- 99.7 1E-16 3.5E-21 153.3 19.2 245 30-348 131-394 (395)
157 3h7f_A Serine hydroxymethyltra 99.7 7.6E-17 2.6E-21 157.2 18.3 262 31-351 132-414 (447)
158 3n75_A LDC, lysine decarboxyla 99.7 1.3E-16 4.4E-21 162.3 20.3 268 29-352 234-561 (715)
159 3ruy_A Ornithine aminotransfer 99.7 2.5E-16 8.5E-21 150.4 21.0 245 30-348 127-391 (392)
160 3d6k_A Putative aminotransfera 99.7 5.1E-17 1.7E-21 157.0 16.1 259 32-352 133-419 (422)
161 3ppl_A Aspartate aminotransfer 99.7 9.5E-17 3.2E-21 155.3 17.8 259 31-352 134-421 (427)
162 3ihj_A Alanine aminotransferas 99.7 1.4E-16 4.7E-21 157.5 19.2 269 31-352 182-494 (498)
163 3qgu_A LL-diaminopimelate amin 99.7 6.9E-17 2.4E-21 157.2 16.8 260 31-351 156-440 (449)
164 2ord_A Acoat, acetylornithine 99.7 1E-16 3.4E-21 153.5 17.0 248 30-350 129-396 (397)
165 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 1E-16 3.4E-21 155.7 17.0 288 30-349 110-434 (437)
166 3ndn_A O-succinylhomoserine su 99.7 2.3E-16 7.7E-21 152.3 18.2 243 31-348 121-413 (414)
167 3acz_A Methionine gamma-lyase; 99.7 6.2E-16 2.1E-20 148.0 20.9 119 30-166 98-222 (389)
168 2eh6_A Acoat, acetylornithine 99.7 3.2E-16 1.1E-20 148.6 18.5 211 65-347 160-374 (375)
169 2fq6_A Cystathionine beta-lyas 99.7 1.6E-16 5.5E-21 153.3 16.6 244 31-346 122-413 (415)
170 1n8p_A Cystathionine gamma-lya 99.7 1.6E-16 5.6E-21 152.3 16.4 243 32-347 95-391 (393)
171 3fkd_A L-threonine-O-3-phospha 99.7 2.8E-16 9.7E-21 147.7 17.3 243 32-350 91-341 (350)
172 1sff_A 4-aminobutyrate aminotr 99.7 2.9E-15 1E-19 144.5 23.8 263 30-351 129-424 (426)
173 3t18_A Aminotransferase class 99.7 9E-16 3.1E-20 147.6 19.9 260 31-352 126-411 (413)
174 3if2_A Aminotransferase; YP_26 99.7 3.3E-16 1.1E-20 152.1 16.7 266 32-353 147-442 (444)
175 2pb2_A Acetylornithine/succiny 99.7 9.3E-16 3.2E-20 148.2 19.8 250 31-351 148-418 (420)
176 4adb_A Succinylornithine trans 99.7 9.6E-16 3.3E-20 146.8 19.6 253 30-353 129-402 (406)
177 1uu1_A Histidinol-phosphate am 99.7 4.9E-16 1.7E-20 145.3 16.9 236 31-347 98-334 (335)
178 1z7d_A Ornithine aminotransfer 99.7 4.1E-15 1.4E-19 144.3 23.6 252 30-352 157-430 (433)
179 3nx3_A Acoat, acetylornithine 99.7 3E-15 1E-19 143.1 22.2 250 30-350 125-394 (395)
180 3nmy_A Xometc, cystathionine g 99.7 7.5E-16 2.6E-20 148.0 17.8 243 32-349 107-397 (400)
181 3ei9_A LL-diaminopimelate amin 99.7 1.7E-16 5.7E-21 153.7 13.2 253 30-349 142-426 (432)
182 1s0a_A Adenosylmethionine-8-am 99.7 6.1E-15 2.1E-19 142.6 23.1 260 30-350 135-423 (429)
183 2oat_A Ornithine aminotransfer 99.7 3E-15 1E-19 145.5 20.8 250 30-350 168-438 (439)
184 3fsl_A Aromatic-amino-acid ami 99.7 2E-16 7E-21 151.1 12.3 254 31-347 122-396 (397)
185 3b1d_A Betac-S lyase; HET: PLP 99.5 3.6E-18 1.2E-22 163.4 0.0 262 30-349 113-391 (392)
186 3asa_A LL-diaminopimelate amin 99.7 2.2E-16 7.6E-21 151.4 12.3 257 31-352 119-394 (400)
187 1ajs_A Aspartate aminotransfer 99.7 3.7E-16 1.3E-20 150.2 13.6 258 32-351 132-411 (412)
188 3f6t_A Aspartate aminotransfer 99.7 1E-15 3.5E-20 152.4 16.4 290 30-353 193-527 (533)
189 2aeu_A Hypothetical protein MJ 99.7 3.5E-16 1.2E-20 148.9 12.2 254 32-353 100-373 (374)
190 4f4e_A Aromatic-amino-acid ami 99.7 3.3E-16 1.1E-20 151.2 11.9 256 31-348 144-419 (420)
191 3g7q_A Valine-pyruvate aminotr 99.6 7.4E-16 2.5E-20 148.1 12.9 260 32-352 129-414 (417)
192 1yaa_A Aspartate aminotransfer 99.6 3.6E-16 1.2E-20 150.3 10.4 252 32-350 126-410 (412)
193 3i4j_A Aminotransferase, class 99.6 4.3E-14 1.5E-18 136.7 24.2 245 53-351 159-428 (430)
194 2eo5_A 419AA long hypothetical 99.6 2.4E-14 8.2E-19 138.2 22.3 255 29-351 129-418 (419)
195 2oqx_A Tryptophanase; lyase, p 99.6 1E-14 3.6E-19 142.4 20.0 264 33-352 125-443 (467)
196 4eu1_A Mitochondrial aspartate 99.6 2E-15 6.7E-20 145.1 14.0 255 31-348 132-408 (409)
197 2ay1_A Aroat, aromatic amino a 99.6 6.8E-16 2.3E-20 147.4 10.6 254 32-347 119-392 (394)
198 3a8u_X Omega-amino acid--pyruv 99.6 2.9E-14 1E-18 138.7 22.2 269 30-351 143-447 (449)
199 3dxv_A Alpha-amino-epsilon-cap 99.6 7.1E-14 2.4E-18 135.5 23.7 263 30-353 131-427 (439)
200 3jzl_A Putative cystathionine 99.6 5E-15 1.7E-19 142.4 15.3 212 32-308 103-339 (409)
201 3hmu_A Aminotransferase, class 99.6 8.5E-14 2.9E-18 136.5 23.9 284 2-356 131-457 (472)
202 3meb_A Aspartate aminotransfer 99.6 7.2E-15 2.5E-19 143.2 15.5 260 31-351 146-444 (448)
203 2q7w_A Aspartate aminotransfer 99.6 1.1E-15 3.7E-20 146.0 9.2 255 31-347 121-395 (396)
204 3i16_A Aluminum resistance pro 99.6 1.7E-14 5.8E-19 139.3 17.5 211 32-307 117-355 (427)
205 3gju_A Putative aminotransfera 99.6 1E-12 3.5E-17 128.3 28.4 234 67-353 207-458 (460)
206 3tfu_A Adenosylmethionine-8-am 99.6 1.1E-13 3.8E-18 135.1 21.3 279 2-352 150-454 (457)
207 2cjg_A L-lysine-epsilon aminot 99.6 8.1E-14 2.8E-18 135.8 20.0 236 53-351 194-448 (449)
208 3n5m_A Adenosylmethionine-8-am 99.6 9.4E-13 3.2E-17 128.2 27.5 227 67-350 201-451 (452)
209 1zod_A DGD, 2,2-dialkylglycine 99.6 7.2E-14 2.5E-18 135.2 19.3 230 65-351 187-432 (433)
210 3dod_A Adenosylmethionine-8-am 99.6 2.5E-12 8.5E-17 125.1 28.7 230 66-352 196-444 (448)
211 7aat_A Aspartate aminotransfer 99.6 1.8E-14 6.2E-19 137.8 13.1 131 30-164 123-264 (401)
212 3ht4_A Aluminum resistance pro 99.6 6.1E-14 2.1E-18 135.8 16.9 212 32-308 109-345 (431)
213 3hvy_A Cystathionine beta-lyas 99.6 7.2E-14 2.5E-18 134.9 17.2 210 32-307 118-355 (427)
214 3i5t_A Aminotransferase; pyrid 99.6 2.7E-12 9.2E-17 125.9 28.8 285 2-356 129-459 (476)
215 4a6r_A Omega transaminase; tra 99.5 5E-13 1.7E-17 130.5 21.6 230 67-353 205-451 (459)
216 3l44_A Glutamate-1-semialdehyd 99.5 6.1E-13 2.1E-17 128.7 19.4 225 66-353 188-432 (434)
217 3k28_A Glutamate-1-semialdehyd 99.5 5.5E-13 1.9E-17 128.9 17.9 222 66-351 186-427 (429)
218 1ohv_A 4-aminobutyrate aminotr 99.5 2E-12 6.9E-17 126.7 21.7 220 66-350 241-470 (472)
219 3fq8_A Glutamate-1-semialdehyd 99.5 3.5E-13 1.2E-17 130.1 13.7 223 66-350 185-426 (427)
220 2epj_A Glutamate-1-semialdehyd 99.5 2.2E-12 7.6E-17 124.8 19.0 224 66-351 189-431 (434)
221 4ffc_A 4-aminobutyrate aminotr 99.5 1.5E-11 5E-16 119.9 24.8 210 85-352 227-450 (453)
222 2zy4_A L-aspartate beta-decarb 99.5 1E-12 3.5E-17 131.0 16.6 129 30-167 194-332 (546)
223 3oks_A 4-aminobutyrate transam 99.5 1.5E-11 5E-16 119.8 24.0 226 66-350 211-450 (451)
224 2cy8_A D-phgat, D-phenylglycin 99.4 5.8E-12 2E-16 122.6 20.8 226 66-354 187-438 (453)
225 4e77_A Glutamate-1-semialdehyd 99.4 5.8E-12 2E-16 121.7 19.2 222 66-350 186-428 (429)
226 3bwn_A AT1G70560, L-tryptophan 99.4 7.3E-13 2.5E-17 126.7 12.6 241 32-350 121-386 (391)
227 3k7y_A Aspartate aminotransfer 99.4 1.1E-12 3.8E-17 126.0 13.7 256 31-350 123-404 (405)
228 3ou5_A Serine hydroxymethyltra 99.4 1.3E-11 4.5E-16 117.2 19.0 237 54-349 178-439 (490)
229 2e7u_A Glutamate-1-semialdehyd 99.3 3.5E-11 1.2E-15 116.0 18.3 219 66-347 185-423 (424)
230 4h51_A Aspartate aminotransfer 99.3 2.1E-11 7.3E-16 117.4 14.7 262 30-353 137-419 (420)
231 2hox_A ALLIIN lyase 1; cystein 99.2 3E-11 1E-15 116.8 10.8 241 29-349 154-423 (427)
232 4ao9_A Beta-phenylalanine amin 99.1 2.1E-09 7.1E-14 104.2 15.5 221 66-353 206-448 (454)
233 2yky_A Beta-transaminase; tran 98.6 1.5E-11 5.1E-16 119.9 0.0 221 66-352 219-461 (465)
234 4e3q_A Pyruvate transaminase; 99.0 2.7E-08 9.2E-13 97.0 19.9 230 68-354 223-471 (473)
235 4atq_A 4-aminobutyrate transam 99.0 2.3E-07 7.8E-12 90.1 26.3 210 84-350 227-454 (456)
236 4a0g_A Adenosylmethionine-8-am 98.8 6.2E-08 2.1E-12 100.7 17.4 229 68-351 577-828 (831)
237 1zco_A 2-dehydro-3-deoxyphosph 67.2 32 0.0011 30.0 9.4 61 65-126 141-205 (262)
238 3nvt_A 3-deoxy-D-arabino-heptu 62.6 32 0.0011 31.9 9.0 82 40-125 238-323 (385)
239 3fkr_A L-2-keto-3-deoxyarabona 56.2 10 0.00035 34.1 4.3 62 58-119 19-83 (309)
240 3l21_A DHDPS, dihydrodipicolin 55.1 13 0.00045 33.2 4.8 71 49-119 16-90 (304)
241 3dz1_A Dihydrodipicolinate syn 55.1 12 0.0004 33.8 4.4 62 58-119 19-82 (313)
242 3s5o_A 4-hydroxy-2-oxoglutarat 53.4 13 0.00046 33.2 4.6 61 58-118 25-88 (307)
243 4gqr_A Pancreatic alpha-amylas 53.2 5.7 0.0002 37.8 2.2 30 92-121 69-98 (496)
244 1vs1_A 3-deoxy-7-phosphoheptul 53.2 31 0.0011 30.3 6.8 63 63-126 153-220 (276)
245 1vr6_A Phospho-2-dehydro-3-deo 53.0 61 0.0021 29.5 8.9 61 65-126 224-288 (350)
246 3ghf_A Septum site-determining 53.0 59 0.002 24.5 7.5 47 66-116 26-77 (120)
247 2wkj_A N-acetylneuraminate lya 52.4 8.8 0.0003 34.4 3.2 74 46-119 9-86 (303)
248 1tks_A 3,4-dihydroxy-2-butanon 50.4 24 0.00082 29.5 5.2 47 71-117 147-193 (204)
249 2yxb_A Coenzyme B12-dependent 49.7 36 0.0012 27.2 6.2 82 29-121 19-108 (161)
250 3cpr_A Dihydrodipicolinate syn 49.3 20 0.00068 32.0 5.0 62 58-119 27-91 (304)
251 2hmc_A AGR_L_411P, dihydrodipi 48.8 16 0.00056 33.3 4.4 62 58-119 37-98 (344)
252 1f6k_A N-acetylneuraminate lya 47.3 20 0.00069 31.8 4.7 62 58-119 14-79 (293)
253 2r8w_A AGR_C_1641P; APC7498, d 46.9 17 0.00058 33.0 4.2 62 58-119 45-109 (332)
254 3kl7_A Putative metal-dependen 45.6 56 0.0019 27.6 7.2 74 31-116 156-229 (235)
255 3rpc_A Possible metal-dependen 45.5 1E+02 0.0035 26.3 9.0 80 30-114 161-249 (264)
256 2pcq_A Putative dihydrodipicol 45.2 8.7 0.0003 34.0 1.9 60 58-119 9-68 (283)
257 1g94_A Alpha-amylase; beta-alp 45.1 8.8 0.0003 36.3 2.1 30 92-121 57-86 (448)
258 3h5d_A DHDPS, dihydrodipicolin 44.8 15 0.00051 33.0 3.5 61 58-118 18-81 (311)
259 3b4u_A Dihydrodipicolinate syn 43.7 18 0.00062 32.1 3.8 62 58-119 14-78 (294)
260 3flu_A DHDPS, dihydrodipicolin 43.3 18 0.00061 32.2 3.7 61 58-118 18-81 (297)
261 4dpp_A DHDPS 2, dihydrodipicol 43.3 27 0.00092 32.1 4.9 62 58-119 70-134 (360)
262 3bh4_A Alpha-amylase; calcium, 43.3 10 0.00035 36.2 2.2 30 92-121 71-100 (483)
263 2nuw_A 2-keto-3-deoxygluconate 42.5 16 0.00056 32.3 3.3 54 58-111 10-63 (288)
264 1ud2_A Amylase, alpha-amylase; 42.1 11 0.00038 36.0 2.3 30 92-121 73-102 (480)
265 1wpc_A Glucan 1,4-alpha-maltoh 42.0 11 0.00038 36.0 2.3 30 92-121 75-104 (485)
266 1w3i_A EDA, 2-keto-3-deoxy glu 41.9 19 0.00065 32.0 3.6 54 58-111 10-63 (293)
267 1hvx_A Alpha-amylase; hydrolas 41.7 11 0.00039 36.3 2.3 30 92-121 74-103 (515)
268 1mxg_A Alpha amylase; hyperthe 41.3 12 0.0004 35.4 2.3 30 92-121 79-108 (435)
269 3si9_A DHDPS, dihydrodipicolin 41.1 17 0.00057 32.8 3.1 61 58-118 33-96 (315)
270 1lwj_A 4-alpha-glucanotransfer 41.0 11 0.00037 35.6 2.0 29 93-121 63-91 (441)
271 1vjn_A Zn-dependent hydrolase 40.8 80 0.0028 26.3 7.4 77 30-111 116-195 (220)
272 2ojp_A DHDPS, dihydrodipicolin 40.4 17 0.00059 32.2 3.1 62 58-119 12-76 (292)
273 3e96_A Dihydrodipicolinate syn 40.3 16 0.00053 33.0 2.8 62 58-119 22-87 (316)
274 3tak_A DHDPS, dihydrodipicolin 40.0 18 0.0006 32.1 3.1 61 58-118 12-75 (291)
275 1y80_A Predicted cobalamin bin 39.9 1.3E+02 0.0044 24.7 8.5 82 30-122 90-180 (210)
276 3na8_A Putative dihydrodipicol 39.9 17 0.00056 32.8 2.9 62 58-119 35-99 (315)
277 2v9d_A YAGE; dihydrodipicolini 39.4 23 0.00079 32.3 3.8 62 58-119 42-106 (343)
278 1xky_A Dihydrodipicolinate syn 39.2 14 0.00047 33.1 2.2 62 58-119 23-87 (301)
279 3qfe_A Putative dihydrodipicol 38.8 18 0.00063 32.5 3.0 58 61-118 25-85 (318)
280 3m5v_A DHDPS, dihydrodipicolin 38.5 18 0.00062 32.3 2.9 59 61-119 21-83 (301)
281 3mio_A DHBP synthase, 3,4-dihy 38.5 62 0.0021 27.0 6.0 48 70-117 145-193 (206)
282 3dhu_A Alpha-amylase; structur 38.5 13 0.00043 35.2 2.0 30 92-121 76-105 (449)
283 1gcy_A Glucan 1,4-alpha-maltot 38.4 13 0.00044 36.1 2.0 28 94-121 87-114 (527)
284 2guy_A Alpha-amylase A; (beta- 37.7 13 0.00046 35.3 2.1 30 92-121 90-119 (478)
285 3qze_A DHDPS, dihydrodipicolin 37.6 19 0.00064 32.4 2.9 62 58-119 34-98 (314)
286 2nly_A BH1492 protein, diverge 36.6 1.4E+02 0.0048 25.6 8.2 77 43-120 44-134 (245)
287 4aie_A Glucan 1,6-alpha-glucos 36.6 14 0.00049 35.6 2.1 30 92-121 72-101 (549)
288 1wza_A Alpha-amylase A; hydrol 36.2 15 0.0005 35.2 2.1 29 93-121 75-103 (488)
289 1ht6_A AMY1, alpha-amylase iso 36.2 13 0.00044 34.6 1.6 28 94-121 63-90 (405)
290 2dh2_A 4F2 cell-surface antige 36.0 14 0.00048 34.7 1.9 30 92-121 74-103 (424)
291 2z1k_A (NEO)pullulanase; hydro 35.5 13 0.00043 35.4 1.5 31 91-121 88-118 (475)
292 3a5f_A Dihydrodipicolinate syn 35.4 25 0.00084 31.2 3.3 60 59-119 14-76 (291)
293 1jae_A Alpha-amylase; glycosid 34.5 13 0.00043 35.5 1.3 30 92-121 67-96 (471)
294 2aaa_A Alpha-amylase; glycosid 34.4 14 0.00048 35.3 1.6 30 92-121 90-119 (484)
295 3kts_A Glycerol uptake operon 34.3 18 0.00061 30.1 2.0 48 66-124 18-67 (192)
296 1x7f_A Outer surface protein; 34.1 46 0.0016 30.8 4.9 59 66-124 39-98 (385)
297 1g57_A DHBP synthase, 3,4-dihy 34.0 75 0.0026 26.8 5.8 46 71-117 155-200 (217)
298 2wc7_A Alpha amylase, catalyti 33.3 15 0.00051 35.1 1.6 30 92-121 95-124 (488)
299 1v77_A PH1877P, hypothetical p 33.0 66 0.0023 26.8 5.5 27 99-125 146-173 (212)
300 3d0c_A Dihydrodipicolinate syn 32.8 25 0.00085 31.6 2.9 62 58-119 22-87 (314)
301 1m53_A Isomaltulose synthase; 32.8 15 0.00051 36.0 1.5 29 93-121 86-114 (570)
302 1ua7_A Alpha-amylase; beta-alp 32.4 12 0.00042 35.0 0.8 29 93-121 68-96 (422)
303 1zja_A Trehalulose synthase; s 32.2 16 0.00055 35.6 1.6 29 93-121 73-101 (557)
304 3bc9_A AMYB, alpha amylase, ca 31.8 20 0.00069 35.4 2.3 30 92-121 201-230 (599)
305 1ea9_C Cyclomaltodextrinase; h 31.7 19 0.00066 35.3 2.1 29 94-122 213-241 (583)
306 3eb2_A Putative dihydrodipicol 31.5 18 0.0006 32.3 1.7 61 58-118 15-78 (300)
307 1uok_A Oligo-1,6-glucosidase; 31.5 18 0.00062 35.3 1.9 30 92-121 71-100 (558)
308 1j0h_A Neopullulanase; beta-al 31.5 17 0.0006 35.7 1.8 30 93-122 216-245 (588)
309 2p0o_A Hypothetical protein DU 31.2 50 0.0017 30.4 4.6 58 66-123 15-73 (372)
310 3sz8_A 2-dehydro-3-deoxyphosph 31.0 59 0.002 28.7 4.9 57 65-123 145-205 (285)
311 3vup_A Beta-1,4-mannanase; TIM 30.8 45 0.0016 29.0 4.3 22 99-120 89-110 (351)
312 1wzl_A Alpha-amylase II; pullu 30.7 17 0.00059 35.7 1.6 29 93-121 213-241 (585)
313 1d3c_A Cyclodextrin glycosyltr 30.4 20 0.00068 36.0 2.0 29 93-121 109-137 (686)
314 3edf_A FSPCMD, cyclomaltodextr 30.3 21 0.00072 35.2 2.1 28 94-121 193-220 (601)
315 2khp_A Glutaredoxin; thioredox 30.3 1.3E+02 0.0044 20.5 7.6 56 26-86 3-60 (92)
316 2ze0_A Alpha-glucosidase; TIM 30.2 20 0.00067 35.0 1.9 29 93-121 72-100 (555)
317 1cyg_A Cyclodextrin glucanotra 30.1 20 0.00069 35.9 2.0 29 93-121 105-133 (680)
318 2zic_A Dextran glucosidase; TI 30.0 19 0.00065 35.0 1.7 29 93-121 72-100 (543)
319 1qho_A Alpha-amylase; glycosid 29.9 21 0.0007 35.9 2.0 30 92-121 100-129 (686)
320 2klx_A Glutaredoxin; thioredox 29.9 1.3E+02 0.0045 20.4 7.0 55 26-87 3-60 (89)
321 1snn_A DHBP synthase, 3,4-dihy 29.3 91 0.0031 26.4 5.6 47 71-118 166-212 (227)
322 1uta_A FTSN, MSGA, cell divisi 28.9 49 0.0017 22.7 3.4 50 294-347 20-69 (81)
323 3bmv_A Cyclomaltodextrin gluca 28.8 22 0.00075 35.7 2.0 29 93-121 110-138 (683)
324 2yxg_A DHDPS, dihydrodipicolin 28.6 28 0.00095 30.8 2.4 58 62-119 15-75 (289)
325 1t1v_A SH3BGRL3, SH3 domain-bi 28.6 1.5E+02 0.005 20.5 7.3 69 29-105 2-80 (93)
326 4aef_A Neopullulanase (alpha-a 28.4 22 0.00074 35.4 1.8 30 92-121 278-307 (645)
327 3aj7_A Oligo-1,6-glucosidase; 28.1 23 0.0008 34.8 2.0 29 93-121 81-109 (589)
328 2qv5_A AGR_C_5032P, uncharacte 28.0 2.9E+02 0.01 23.8 9.1 54 65-119 107-160 (261)
329 2ehh_A DHDPS, dihydrodipicolin 27.5 30 0.001 30.7 2.4 58 62-119 15-75 (294)
330 1g5a_A Amylosucrase; glycosylt 27.4 23 0.0008 35.1 1.9 30 92-121 155-184 (628)
331 3czg_A Sucrose hydrolase; (alp 27.4 23 0.00077 35.4 1.8 30 92-121 148-177 (644)
332 2r91_A 2-keto-3-deoxy-(6-phosp 27.3 29 0.00098 30.6 2.3 50 62-111 13-62 (286)
333 4aee_A Alpha amylase, catalyti 27.1 25 0.00084 35.4 2.0 29 93-121 305-333 (696)
334 3zss_A Putative glucanohydrola 27.0 27 0.00093 35.2 2.3 30 94-123 315-344 (695)
335 1o60_A 2-dehydro-3-deoxyphosph 26.9 65 0.0022 28.5 4.5 56 66-123 144-203 (292)
336 3h8q_A Thioredoxin reductase 3 26.7 1.8E+02 0.0062 21.0 7.8 72 29-105 17-90 (114)
337 2bhu_A Maltooligosyltrehalose 26.7 23 0.00078 35.0 1.6 29 93-121 186-214 (602)
338 1m7x_A 1,4-alpha-glucan branch 26.5 23 0.00078 35.1 1.6 28 94-121 199-226 (617)
339 2qkf_A 3-deoxy-D-manno-octulos 26.1 69 0.0024 28.1 4.5 56 66-123 141-200 (280)
340 2lqo_A Putative glutaredoxin R 25.9 1.7E+02 0.006 20.5 7.6 56 28-87 3-60 (92)
341 1iv0_A Hypothetical protein; r 25.7 1.9E+02 0.0064 20.8 6.3 63 54-122 28-95 (98)
342 3vgf_A Malto-oligosyltrehalose 25.6 22 0.00076 34.7 1.3 30 93-122 161-190 (558)
343 1o5k_A DHDPS, dihydrodipicolin 25.2 32 0.0011 30.7 2.2 58 62-119 27-87 (306)
344 3bzy_B ESCU; auto cleavage pro 25.2 35 0.0012 24.0 1.9 20 102-121 29-48 (83)
345 2jwk_A Protein TOLR; periplasm 24.8 87 0.003 20.7 4.0 49 63-114 25-73 (74)
346 1nu0_A Hypothetical protein YQ 24.5 1E+02 0.0035 23.8 4.7 57 62-123 37-99 (138)
347 3m07_A Putative alpha amylase; 24.3 28 0.00096 34.5 1.8 30 93-122 196-225 (618)
348 3aie_A Glucosyltransferase-SI; 24.2 32 0.0011 35.5 2.1 28 94-121 687-714 (844)
349 3fs2_A 2-dehydro-3-deoxyphosph 23.8 88 0.003 27.8 4.7 56 65-123 166-224 (298)
350 2nwr_A 2-dehydro-3-deoxyphosph 23.8 95 0.0032 27.1 4.9 56 65-124 129-187 (267)
351 3ezx_A MMCP 1, monomethylamine 23.7 1.8E+02 0.0063 24.1 6.6 84 29-121 93-185 (215)
352 3rag_A Uncharacterized protein 23.6 81 0.0028 27.1 4.3 36 84-121 11-46 (242)
353 3ucq_A Amylosucrase; thermosta 22.9 32 0.0011 34.3 1.9 32 90-121 151-182 (655)
354 3k1d_A 1,4-alpha-glucan-branch 22.7 30 0.001 35.0 1.7 30 93-122 306-335 (722)
355 3ic4_A Glutaredoxin (GRX-1); s 22.2 1.9E+02 0.0064 19.6 6.8 78 28-109 11-90 (92)
356 3aml_A OS06G0726400 protein; s 22.2 35 0.0012 34.8 2.0 30 93-122 244-273 (755)
357 3k8k_A Alpha-amylase, SUSG; al 22.2 37 0.0013 34.0 2.1 30 92-121 99-128 (669)
358 2rfg_A Dihydrodipicolinate syn 21.0 36 0.0012 30.2 1.6 50 61-110 14-63 (297)
359 1iv8_A Maltooligosyl trehalose 20.6 45 0.0016 33.6 2.4 31 91-121 57-87 (720)
360 1ccw_A Protein (glutamate muta 20.6 2E+02 0.0068 21.8 5.8 64 47-121 27-93 (137)
361 3t7y_A YOP proteins translocat 20.6 46 0.0016 24.2 1.8 21 102-122 44-64 (97)
362 1ji1_A Alpha-amylase I; beta/a 20.3 33 0.0011 34.0 1.4 28 94-121 233-264 (637)
363 4awe_A Endo-beta-D-1,4-mannana 20.3 2E+02 0.0069 24.9 6.7 22 99-120 100-121 (387)
364 3daq_A DHDPS, dihydrodipicolin 20.1 47 0.0016 29.3 2.2 58 60-118 16-76 (292)
365 2xw6_A MGS, methylglyoxal synt 20.0 1.7E+02 0.0058 22.5 5.1 78 30-120 31-112 (134)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-46 Score=369.02 Aligned_cols=321 Identities=45% Similarity=0.836 Sum_probs=284.9
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
++||++||++++.+.+..++++.+.++.++.+||+|+.+|+|+.+++.+.|++++.|++++++++|+++|+++|+++.++
T Consensus 159 ~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~ 238 (481)
T 4e1o_A 159 LIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQR 238 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhC
Confidence 46899999999988776677666666678999999999999999999999999999999889999999999999998877
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
+..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.++....+++.+|++++++|||+++|+|+|
T Consensus 239 g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g 318 (481)
T 4e1o_A 239 GLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCT 318 (481)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCE
T ss_pred CCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceE
Confidence 87788999999999999999999999999999999999999999888787777777788889999999999999999999
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++++++..+.+.+...+.|+..... ....++ .+|++++++++.++++|
T Consensus 319 ~l~~~~~~~l~~~~~~~~~yl~~~~~---~~~~~~----------------------------~~~~~~~~r~~~~l~~~ 367 (481)
T 4e1o_A 319 GFWVKDKYKLQQTFSVNPIYLRHANS---GVATDF----------------------------MHWQIPLSRRFRSVKLW 367 (481)
T ss_dssp EEEESBHHHHHTTTCCCCGGGCCTTT---TTSCCG----------------------------GGGSSSSCCCCTHHHHH
T ss_pred EEEEeCHHHHHHHhcCCchhccCccc---CCCCCc----------------------------ccccccCCCCccHHHHH
Confidence 99999887776666667788766432 112233 56778888889999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR 320 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 320 (367)
++++.+|.+|+++++++..++++++.+.|+++||++++.++.+++++|++.+.+..+.++.++|.++|.+++.++.+.+.
T Consensus 368 ~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~ 447 (481)
T 4e1o_A 368 FVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDK 447 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTE
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCE
Confidence 99999999999999999999999999999999999998888899999999765566789999999999888888888998
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.++|+++++++++++||++++++|+++++++.
T Consensus 448 ~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 448 LIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999888889999999999999999988764
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=2.6e-46 Score=368.62 Aligned_cols=321 Identities=48% Similarity=0.868 Sum_probs=267.2
Q ss_pred CchHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC
Q psy3048 1 MVSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~ 80 (367)
++||++||++++.+.+..++++.+.++.++.+|++|+.+|+|+.+++++.|++++.|++++++ +|+++|+++|++++++
T Consensus 153 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~ 231 (475)
T 3k40_A 153 LVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAE 231 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHC
Confidence 478999999998776655666666566678999999999999999999999999999998889 9999999999998877
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
+..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.....+.+++.+|++++++|||+++|.|+|
T Consensus 232 ~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g 311 (475)
T 3k40_A 232 GLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCS 311 (475)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCE
T ss_pred CCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceE
Confidence 77788999999999999999999999999999999999999999887777777767777889999999999999999999
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++++++..+.+.+...+.|+..... +...++ .+|++++++++.++++|
T Consensus 312 ~l~~~~~~~l~~~~~~~~~yl~~~~~---~~~~~~----------------------------~~~~~~~sr~~~~l~l~ 360 (475)
T 3k40_A 312 AMWLKDPSWVVNAFNVDPLYLKHDMQ---GSAPDY----------------------------RHWQIPLGRRFRALKLW 360 (475)
T ss_dssp EEEESSGGGC----------------------------------------------------------CCCGGGTHHHHH
T ss_pred EEEEeCHHHHHHHhcCCccccCCCcC---CCCCCc----------------------------ccccccCCCcccHHHHH
Confidence 99999887665555566777755422 111222 45677888889999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR 320 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 320 (367)
++++.+|.+|++++.++..++++++.+.|+++||++++.++..++++|++.+.+..+.++.++|.++|.+++.++.+.+.
T Consensus 361 ~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~ 440 (475)
T 3k40_A 361 FVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDV 440 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCE
Confidence 99999999999999999999999999999999999999888899999999765566789999999999888888888999
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.++|+++++++++++||++++++|+++++++..
T Consensus 441 ~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 441 YFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999998888899999999999999999988754
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=5.4e-42 Score=338.86 Aligned_cols=325 Identities=49% Similarity=0.872 Sum_probs=260.7
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 81 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~ 81 (367)
+||+++|++++++.+..+.++.+.+..++.+|++++.+|+++.++++..|++++.|++++++.+|+++|+++++++++++
T Consensus 154 ~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g 233 (486)
T 1js3_A 154 VALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAG 233 (486)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCC
Confidence 57888888766543221122222222246789999999999999999999999999998889999999999999999888
Q ss_pred CccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCccee
Q psy3048 82 LIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSA 161 (367)
Q Consensus 82 ~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~ 161 (367)
..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.++..+.+++.+|++++++|||+++|.|+|+
T Consensus 234 ~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~ 313 (486)
T 1js3_A 234 LIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSA 313 (486)
T ss_dssp CEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEE
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEE
Confidence 88889999999999999999999999999999999999999998877666665555666789999999999999999999
Q ss_pred EEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHH
Q psy3048 162 MWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWM 241 (367)
Q Consensus 162 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
++++++..+.+.+...+.|+...... .+...++ .++++..++++.++++|+
T Consensus 314 l~~~~~~~l~~~~~~~~~yl~~~~~~-~~~~~~~----------------------------~~~~~~~~rr~~~~~~~~ 364 (486)
T 1js3_A 314 MWVKRRTDLTGAFKLDPVYLKHSHQG-SGLITDY----------------------------RHWQLPLGRRFRSLKMWF 364 (486)
T ss_dssp EEESCHHHHHGGGC-------------CCSCCCG----------------------------GGSSSCSCCCCTHHHHHH
T ss_pred EEEeCHHHHHHHhcCCchhhCCCccc-ccCCCCc----------------------------cccCCCCCCchhHHHHHH
Confidence 99988765545455556676543210 0011222 456667788888999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCee
Q psy3048 242 TLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRP 321 (367)
Q Consensus 242 ~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 321 (367)
+++.+|.+|++++.++..++++++.+.|+++||++++.+|..++++|++.+.+..+.++.++|.++|++++.++.+.+..
T Consensus 365 al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 444 (486)
T 1js3_A 365 VFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQF 444 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEE
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEE
Confidence 99999999999999999999999999999999999988778899999987534456889999999998777777788888
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
++|+++++++++++||+++++.|+++++++..+.
T Consensus 445 ~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~~ 478 (486)
T 1js3_A 445 VLRFAICSRKVESGHVRLAWEHIRGLAAELLAAE 478 (486)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999877889999999999999999998876553
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1.9e-40 Score=329.54 Aligned_cols=317 Identities=26% Similarity=0.430 Sum_probs=262.9
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHHHHHHHHHHh
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVKEDL 78 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~L~~~l~~~~ 78 (367)
+||+++|++++++....|- ...++.+|++|+.+|+|+.++++..|+ +++.|++++++.+|+++|+++|++..
T Consensus 169 ~al~~a~~~~~~~~~~~G~-----~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~ 243 (511)
T 3vp6_A 169 YSIMAARYKYFPEVKTKGM-----AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAK 243 (511)
T ss_dssp HHHHHHHHHHCTHHHHHCG-----GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhcCc-----ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHH
Confidence 5788888887644322220 012478999999999999999999988 99999998889999999999999887
Q ss_pred hCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc
Q psy3048 79 AKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD 158 (367)
Q Consensus 79 ~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g 158 (367)
++|..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.++..+.|++.+|++++++||||++|.|
T Consensus 244 ~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g 323 (511)
T 3vp6_A 244 QKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ 323 (511)
T ss_dssp HTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC
T ss_pred hcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC
Confidence 77777889999999999999999999999999999999999999999988887777778888899999999999999999
Q ss_pred ceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHH
Q psy3048 159 CSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALK 238 (367)
Q Consensus 159 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+|+++++++..+...+...+.|+...... .....++ .++++++++++.+++
T Consensus 324 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~-~~~~~~~----------------------------~~~~~~~~r~~~al~ 374 (511)
T 3vp6_A 324 CSAILVKEKGILQGCNQMHASYLFQQDKH-YDVSYDT----------------------------GDKAIQCGRHVDIFK 374 (511)
T ss_dssp CEEEEESSTTHHHHHHCCCCTTTCCSSCS-SCGGGCC----------------------------GGGSSCSSCCCCHHH
T ss_pred eEEEEEeCHHHHHHHhccCCccccCcccc-cccccCc----------------------------cCCCCCCCCchHHHH
Confidence 99999998877766666778887654320 0000111 457788888899999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCc---------------hHHHHHH
Q psy3048 239 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDN---------------DLTNQLY 301 (367)
Q Consensus 239 ~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~---------------~~~~~l~ 301 (367)
+|++++.+|.+|++++.++..++++++.+.|+++||++++. +|..++++|++.+.. ..+.++.
T Consensus 375 ~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~ 454 (511)
T 3vp6_A 375 FWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIK 454 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 578899999875421 1234788
Q ss_pred HHHhccCcEEEEEeEECC-eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 302 ERLMSHKQIYIIKASFQG-RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 302 ~~L~~~g~~~~~~~~~~~-~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
++|.++|.+++.+....+ ..++|++++++.++++||++++++|+++.+.+-
T Consensus 455 ~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 455 ALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp HHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 999999987776554444 458999877899999999999999999987654
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=2.6e-38 Score=313.98 Aligned_cols=314 Identities=26% Similarity=0.432 Sum_probs=252.4
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccc--cCceEEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHHHHHHHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDI--KSRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVKE 76 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~L~~~l~~ 76 (367)
+||+++|++++++.+ +++. .++.+|++++.+|+++.+++...|. +++.|++++++.+|+++|++++++
T Consensus 166 ~al~~~~~~~~~~~~-------~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~ 238 (504)
T 2okj_A 166 YSIMAARYKYFPEVK-------TKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILE 238 (504)
T ss_dssp HHHHHHHHHHCTTHH-------HHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHh-------hcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHH
Confidence 567788876653211 1121 1266899999999999999998876 899999988899999999999998
Q ss_pred HhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC
Q psy3048 77 DLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN 156 (367)
Q Consensus 77 ~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p 156 (367)
...++..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.+...+.+++.+|++++++|||+++|
T Consensus 239 ~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p 318 (504)
T 2okj_A 239 AKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL 318 (504)
T ss_dssp HHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC
T ss_pred HHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC
Confidence 76666667899999999999999999999999999999999999999988876666566666777899999999999999
Q ss_pred CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccH
Q psy3048 157 HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRA 236 (367)
Q Consensus 157 ~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
.|+|+++++++..+...+...++|+....... ....++ .+++.+.++++.+
T Consensus 319 ~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~----------------------------~~~~~~~~rr~~~ 369 (504)
T 2okj_A 319 LQCSAILVKEKGILQGCNQMCAGYLFQPDKQY-DVSYDT----------------------------GDKAIQCGRHVDI 369 (504)
T ss_dssp SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSS-CGGGCC----------------------------GGGSSCSSCBCCH
T ss_pred cceEEEEEECHHHHHHHhcCCCccccCCcccc-cCcCCc----------------------------ccCCCCCCCCccH
Confidence 99999999886555544455667775432200 000111 4456678888889
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeC--CCCceeEEEEEcCCc---------------hHHHH
Q psy3048 237 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVC--PPSMGLVCFRLKGDN---------------DLTNQ 299 (367)
Q Consensus 237 ~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~--~~~~~~v~f~~~~~~---------------~~~~~ 299 (367)
+++|++++.++.+|++++.++..++++++.+.|++++|++++. +|..++++|+..+.. ..+.+
T Consensus 370 l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (504)
T 2okj_A 370 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPK 449 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987 577888999874311 12467
Q ss_pred HHHHHhccCcEEEEEeEECCe-eEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 300 LYERLMSHKQIYIIKASFQGR-PFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 300 l~~~L~~~g~~~~~~~~~~~~-~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.++|.++|.+++.+..+.+. .++|+++.+++++++||++++++|+++++++
T Consensus 450 l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 450 IKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 888999999877776666664 6999987678999999999999999987653
No 6
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.5e-38 Score=313.47 Aligned_cols=314 Identities=24% Similarity=0.415 Sum_probs=245.2
Q ss_pred chHHHHHHHhHhhhhcCCCCccccccc---CceEEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHHHHHHHH
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIK---SRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVK 75 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~L~~~l~ 75 (367)
++|++||++++.+.. ++++.+++.. ++.+|++++.+|+|+.+++...|. +++.|++++++.+|+++|+++++
T Consensus 173 ~al~~ar~~~~~~~~--~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~ 250 (497)
T 2qma_A 173 MGLMLARDWIADKLS--GHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIA 250 (497)
T ss_dssp HHHHHHHHHHHHHHH--CCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHhhc--ccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHH
Confidence 578888887764321 1112222222 367899999999999999998876 89999998889999999999998
Q ss_pred HHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc
Q psy3048 76 EDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT 155 (367)
Q Consensus 76 ~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~ 155 (367)
++..++..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+ +...+.+++.+|++++++|||+++
T Consensus 251 ~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~ 329 (497)
T 2qma_A 251 QAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQ 329 (497)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCC
T ss_pred HHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCC
Confidence 8765555567899999999999999999999999999999999999999887665 544456677789999999999999
Q ss_pred CCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccccc
Q psy3048 156 NHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFR 235 (367)
Q Consensus 156 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
|.++|+++++++..+. .+...+.|+..... ..+++ ..+...+++++.
T Consensus 330 p~~~G~l~~~~~~~~~-~~~~~~~yl~~~~~----~~~~~----------------------------~~~~~~~~r~~~ 376 (497)
T 2qma_A 330 TISCGALLVNDKSNFK-FLLHHADYLNREHD----ELPNL----------------------------VDKSIATTKRFD 376 (497)
T ss_dssp CSSCEEEEESCGGGGG-GGCC----------------------------------------------------CCSCCCT
T ss_pred CcceEEEEEeCHHHHH-HhcCCchhcCCccc----cCCCc----------------------------cccCCCCCCchh
Confidence 9999999998776443 23334556543221 01122 334556778889
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc----hHHHHHHHHHhccCcEE
Q psy3048 236 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN----DLTNQLYERLMSHKQIY 311 (367)
Q Consensus 236 ~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~ 311 (367)
++++|++++.++.+|++++.++..++++++.+.|+++++++++.++..++++|++.+.. ..+.++.+.|.++|.++
T Consensus 377 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~ 456 (497)
T 2qma_A 377 ALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAV 456 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCB
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999988888899999986532 23457888899999877
Q ss_pred EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 312 IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 312 ~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..++.+.+..++|+++.+++++++|++++++.|+++++++
T Consensus 457 ~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 457 LGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp CEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 7777778888999987678999999999999999988763
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=307.53 Aligned_cols=315 Identities=29% Similarity=0.447 Sum_probs=244.4
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc---ceEEEecCCCCCcCHHHHHHHHHHHh
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVKEDL 78 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~v~~v~~~~~~~~d~~~L~~~l~~~~ 78 (367)
+||+++|+++++..+..+ . .+ .++++|++++.+|+++.++++..|. +++.|++++++.+|+++|++++++..
T Consensus 180 ~al~~ar~~~~~~~~~~G--~--~~-~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~ 254 (515)
T 2jis_A 180 YAVNLARYQRYPDCKQRG--L--RT-LPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAE 254 (515)
T ss_dssp HHHHHHHHHHCTTHHHHC--G--GG-SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHhhcC--c--cc-cCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHH
Confidence 577888876643211111 0 01 2467999999999999999999888 89999998889999999999999876
Q ss_pred hCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc
Q psy3048 79 AKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD 158 (367)
Q Consensus 79 ~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g 158 (367)
.++..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.+...+.+++.+|++++++|||+++|.|
T Consensus 255 ~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g 334 (515)
T 2jis_A 255 AEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQ 334 (515)
T ss_dssp HTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC
T ss_pred hCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCC
Confidence 66666789999999999999999999999999999999999999999887776665566777889999999999999999
Q ss_pred ceeEEEecc-hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHH
Q psy3048 159 CSAMWVKNA-NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRAL 237 (367)
Q Consensus 159 ~g~l~~~~~-~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
+|+++++++ ..+.+.+...++|+....... ....++ ..++++.++++.++
T Consensus 335 ~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~~----------------------------~~~~~~~~rr~~al 385 (515)
T 2jis_A 335 CSALLLQDTSNLLKRCHGSQASYLFQQDKFY-DVALDT----------------------------GDKVVQCGRRVDCL 385 (515)
T ss_dssp CEEEEESCCSCHHHHHHCC---------CCS-CGGGCC----------------------------GGGCSCSSCCCCHH
T ss_pred eeEEEEeChHHHHHHHhcCCchhccCCcccc-cccCCC----------------------------CCCCCCCCCcccHH
Confidence 999999887 555554555567774432100 000011 33556777888899
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC--------chH-------HHHHHH
Q psy3048 238 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD--------NDL-------TNQLYE 302 (367)
Q Consensus 238 ~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--------~~~-------~~~l~~ 302 (367)
++|+.++.++.+|++++.++..++++++.+.|++++|++++.++..+.++|++.+. ... +..+.+
T Consensus 386 ~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~ 465 (515)
T 2jis_A 386 KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKE 465 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998877778899987421 111 124677
Q ss_pred HHhccCcEEEEEeEECC-eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 303 RLMSHKQIYIIKASFQG-RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 303 ~L~~~g~~~~~~~~~~~-~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.|.++|.+++.+..+.+ ..++|+++++++++++||+++++.|++++++
T Consensus 466 ~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 466 RMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 88889987766555554 4699998767899999999999999988654
No 8
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=4.5e-34 Score=283.13 Aligned_cols=302 Identities=21% Similarity=0.229 Sum_probs=234.1
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAK 80 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~ 80 (367)
+++++++..+.++.+..|.. ..++.|++++.+|+++.++++..|++++.|+++++ +.+|+++|++++++++
T Consensus 132 ~a~~a~~~~~~~~~~~~G~~------~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t-- 203 (502)
T 3hbx_A 132 LAGLAFKRKWQNKRKAEGKP------VDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENT-- 203 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTCC------CSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTE--
T ss_pred HHHHHHHHHHhHHHHhcCCC------CCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCC--
Confidence 46777777766654433321 23568899999999999999999999999998765 9999999999998764
Q ss_pred CCccEEEEEecCCCcccccCChhhHHHHHhhc------CcEEEEecccccccc--cChhhhhhhCCCCCcceeeeccccc
Q psy3048 81 GLIPCCLVATLGTTGTCAFDNLEELGPICQEY------NIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFAFNAHKW 152 (367)
Q Consensus 81 ~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~------gi~l~vD~a~~~~~~--~~~~~~~~~~~~~~~D~~~~~~hK~ 152 (367)
.+|++++++|++|.++|+++|+++|+++ |+|+|||+||+++.. ..+.....+. ...+|++++++|||
T Consensus 204 ----~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~ 278 (502)
T 3hbx_A 204 ----ICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKY 278 (502)
T ss_dssp ----EEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTT
T ss_pred ----EEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccc
Confidence 5899999999999999999999999999 999999999987642 2233222222 35679999999999
Q ss_pred cccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc
Q psy3048 153 LLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR 232 (367)
Q Consensus 153 l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+++|.|+|+++++++..+...+...+.|+..... .+.+..++
T Consensus 279 l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~--------------------------------------~~~~~~sr 320 (502)
T 3hbx_A 279 GLVYAGIGWVIWRNKEDLPEELIFHINYLGADQP--------------------------------------TFTLNFSK 320 (502)
T ss_dssp TCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEE--------------------------------------ECCSCCSC
T ss_pred cCCCCCeEEEEEeCHHHhhHHhccCcccccCCCC--------------------------------------CccccCCc
Confidence 9999999999998776554444444555543311 11222223
Q ss_pred c-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCc-hHHHHHHHHHhccCc
Q psy3048 233 R-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGDN-DLTNQLYERLMSHKQ 309 (367)
Q Consensus 233 ~-~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~ 309 (367)
. ...+++|++++.++.+|+.+++++..++++++.+.|+++++++++.+ +..++++|++++.. ....++.++|.++|+
T Consensus 321 ~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi 400 (502)
T 3hbx_A 321 GSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGW 400 (502)
T ss_dssp BSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCc
Confidence 2 24688999999999999999999999999999999999988999877 78999999997532 234589999999997
Q ss_pred EEEEEe---EECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 310 IYIIKA---SFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 310 ~~~~~~---~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
+..... ...+..++|+++ ...++++|++++++.|+++++++....
T Consensus 401 ~v~~~~~p~~~~~~~~lRisv-~~~~t~edid~li~~L~~~l~~l~~~~ 448 (502)
T 3hbx_A 401 IVPAYTMPPNAQHITVLRVVI-REDFSRTLAERLVIDIEKVMRELDELP 448 (502)
T ss_dssp BCCEEECCTTCTTCEEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEeeccCCcccCCceEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 642222 223457999976 578889999999999999998876543
No 9
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=1.2e-33 Score=276.54 Aligned_cols=299 Identities=18% Similarity=0.207 Sum_probs=223.4
Q ss_pred chHHHHHHHhHhhhhcCCCCccccccc-CceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhh
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIK-SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLA 79 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~ 79 (367)
++++++++++..+....| .. .+..|++++ .|+++.++++..|++++.|++++ ++.+|+++|++++++++
T Consensus 118 ~al~a~~~~~~~~~~~~G-------~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t- 188 (452)
T 2dgk_A 118 LGGMAMKWRWRKRMEAAG-------KPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENT- 188 (452)
T ss_dssp HHHHHHHHHHHHHHHHTT-------CCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTE-
T ss_pred HHHHHHHHHHHHHHHhcC-------CCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhCC-
Confidence 456677765554322121 11 134677788 99999999999999999999976 79999999999997654
Q ss_pred CCCccEEEEEecCCCcccccCChhhHHHHHhhc------CcEEEEeccccccccc--ChhhhhhhCCCCCcceeeecccc
Q psy3048 80 KGLIPCCLVATLGTTGTCAFDNLEELGPICQEY------NIWLHVDAAYAGSALL--LPEYAHLKRGLEYVDSFAFNAHK 151 (367)
Q Consensus 80 ~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~------gi~l~vD~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK 151 (367)
.+|++++++|++|.++|+++|+++|++| |+|+|||+||+++..+ .+.....+ ....+|++++++||
T Consensus 189 -----~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK 262 (452)
T 2dgk_A 189 -----IGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHK 262 (452)
T ss_dssp -----EEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTT
T ss_pred -----EEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-CCCCCcEEEECccc
Confidence 5899999999999999999999999996 9999999999887541 22211111 14467999999999
Q ss_pred ccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccc
Q psy3048 152 WLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLS 231 (367)
Q Consensus 152 ~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (367)
|+++|+|+|+++++++..+.+.+...+.|+.... ..++..++
T Consensus 263 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~ 304 (452)
T 2dgk_A 263 FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQI--------------------------------------GTFAINFS 304 (452)
T ss_dssp TTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCE--------------------------------------EECCSCCS
T ss_pred ccCCCCCeEEEEEcCHHHHHHHhccCccccCCCC--------------------------------------CCcccCCC
Confidence 9999999999999876544232322344442210 11222333
Q ss_pred ccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC----CCceeEEEEEcCCc---hHHHHHHHH
Q psy3048 232 RRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP----PSMGLVCFRLKGDN---DLTNQLYER 303 (367)
Q Consensus 232 ~~~-~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~----~~~~~v~f~~~~~~---~~~~~l~~~ 303 (367)
+.+ ..+++|++++.++.+|++++.++..++++++.+.|+++++++++.+ +..++++|++++.. ....++.++
T Consensus 305 r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~ 384 (452)
T 2dgk_A 305 RPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSER 384 (452)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHH
Confidence 333 5688899999999999999999999999999999999988998865 57789999986521 123689999
Q ss_pred HhccCcE---EEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 304 LMSHKQI---YIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 304 L~~~g~~---~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
|.++|+. +..+....+..++|++++ .++|++|+|+++++|+++++++...
T Consensus 385 L~~~Gi~v~~~~~~~~~~~~~~lRis~~-~~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 385 LRLRGWQVPAFTLGGEATDIVVMRIMCR-RGFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp HHHTTCBCCEEECSTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCeeeeeeCCcccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999863 222222335679999764 5667999999999999998877644
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-29 Score=249.22 Aligned_cols=271 Identities=18% Similarity=0.222 Sum_probs=206.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+..|++++.+|.++.++++..|++++.|++++ ++.+|+++|++++++++ .+|++++++|++|.++|+++|+++
T Consensus 158 ~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~p~nptG~~~~l~~i~~l 231 (497)
T 3mc6_A 158 EPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNT------VLLVGSAPNFPHGIADDIEGLGKI 231 (497)
T ss_dssp SCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSE------EEEEEETTCTTTCCCCSCTTTTTH
T ss_pred CceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCC------EEEEEECCCCCCCcCCCHHHHHHH
Confidence 34788899999999999999999999999987 79999999999987644 689999999999999999999999
Q ss_pred HhhcCcEEEEeccccccccc---------ChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcc
Q psy3048 109 CQEYNIWLHVDAAYAGSALL---------LPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~---------~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
|++||+|+|||+||+++... .+.+..... .+|++++++|||+++|.|+|+++++++..........+.
T Consensus 232 a~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~---g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~ 308 (497)
T 3mc6_A 232 AQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP---GVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPA 308 (497)
T ss_dssp HHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST---TCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTT
T ss_pred HHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC---CCcEEEECchhhcCCCCCceeEEecCHHHHhhhhccccc
Confidence 99999999999999876542 111222222 359999999999999999999999775433211111111
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
|.... + . .....+++ ....+++|++++.++.+|+++..++.
T Consensus 309 ~~~~~----------~----------~------------------~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~ 350 (497)
T 3mc6_A 309 WTGGL----------Y----------G------------------SPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEI 350 (497)
T ss_dssp CTTSC----------B----------C------------------CSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCC----------c----------C------------------CcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHH
Confidence 11110 0 0 00111111 11246688999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 259 ISLAKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 259 ~~la~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
.++++++.+.|++ ++|++++.++..+.++|+..+ ....++.+.|.++|+.. .. ...+..+|++++ .++++|+
T Consensus 351 ~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~--~~~~~l~~~L~~~Gi~v-~~--~~~~~~~ri~~~--~~t~e~i 423 (497)
T 3mc6_A 351 VGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKT--LNIHELSDRLSKKGWHF-NA--LQKPVALHMAFT--RLSAHVV 423 (497)
T ss_dssp HHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTT--TTHHHHHHHHHTTTCBC-EE--CCSSCCEEEECC--TTTTCTH
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCC--CCHHHHHHHHHhCCEEE-ec--CCCCCeEEEEEe--CCCHHHH
Confidence 9999999999999 799999888888888887653 23678999999999643 22 223346898664 5689999
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy3048 338 AFAWNEISHQSSEMNLP 354 (367)
Q Consensus 338 d~li~~l~~~~~~~~~~ 354 (367)
++++++|+++++++...
T Consensus 424 ~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 424 DEICDILRTTVQELKSE 440 (497)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999987654
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=1.9e-28 Score=243.60 Aligned_cols=273 Identities=15% Similarity=0.148 Sum_probs=207.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+..|+++..+|.++.++++..|++++.|++++++.+|+++|++++++.+ .+|++++++|++|.++|+++|.++|
T Consensus 192 ~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~------~~v~~~~~~nptG~~~~l~~i~~la 265 (514)
T 3mad_A 192 APEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNT------VVVAGSAPGYPHGVVDPIPEIAALA 265 (514)
T ss_dssp SCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTE------EEEEEETTCTTTCCCCCHHHHHHHH
T ss_pred CCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCC------EEEEEeCCCCCCccccCHHHHHHHH
Confidence 4578889999999999999999999999998899999999999997654 5889999999999999999999999
Q ss_pred hhcCcEEEEeccccccccc--------ChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 110 QEYNIWLHVDAAYAGSALL--------LPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
++||+|+|+|+||+++.++ .+.+.... ..+|++++++|||+++|.|+|+++++++............|.
T Consensus 266 ~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 342 (514)
T 3mad_A 266 AEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRL---EGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWP 342 (514)
T ss_dssp HHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTS---TTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCT
T ss_pred HHhCCeEEEecccccccchhHHhcCCCCCcccccC---CCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccC
Confidence 9999999999999876542 11122212 245999999999999999999999987654322110000110
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
.. .+ ..+...+++. ...++++++++.++.++++++.++..+
T Consensus 343 ~~----------~~----------------------------~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~ 384 (514)
T 3mad_A 343 GG----------LY----------------------------FSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQ 384 (514)
T ss_dssp TC----------SE----------------------------EESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----------cc----------------------------cCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 00 00 0111112221 234688899999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~l 340 (367)
+++++.+.|++++|++++.++ .+++.|...+ ....++.++|.++|++. . . ...+..+|++++...++++|++++
T Consensus 385 ~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~--~~~~~l~~~L~~~Gi~v-~-g-~~~~~~~Ri~~~~~~~~~e~i~~~ 458 (514)
T 3mad_A 385 AADRLKAGVRAIPSLKILGDP-LWVIAVASDE--LNIYQVMEEMAGRGWRL-N-G-LHRPPAFHVALTLRHTEPGVVDRF 458 (514)
T ss_dssp HHHHHHHHHHTSTTCEESSCC-SSEEEEECSS--SCHHHHHHHHHTTTCBC-E-E-ETTTTEEEEECCGGGGSTTHHHHH
T ss_pred HHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCC--CCHHHHHHHHHhcCCEe-c-c-CCCCCeEEEEEecCCCCHHHHHHH
Confidence 999999999999999988665 4567776543 23578999999998653 2 2 233457999876677788999999
Q ss_pred HHHHHHHHHHhhCCC
Q psy3048 341 WNEISHQSSEMNLPR 355 (367)
Q Consensus 341 i~~l~~~~~~~~~~~ 355 (367)
++.|+++++++..+.
T Consensus 459 l~~L~~~l~~~~~~~ 473 (514)
T 3mad_A 459 LADLQDAVAQVRAHP 473 (514)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999998876543
No 12
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=8.3e-28 Score=235.49 Aligned_cols=261 Identities=15% Similarity=0.158 Sum_probs=190.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec---CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~---~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.+|++++.+|.++.++++..|++++.++. ++++.+|+++|++++++...++ .+++|+.+.++|++|.++|+++|++
T Consensus 177 ~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~ 255 (456)
T 2z67_A 177 NVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAK 255 (456)
T ss_dssp CEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHH
Confidence 34565667999999999999999999886 6679999999999994321111 2467778889999999999999999
Q ss_pred HHhhcCcEEEEeccccccccc-ChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALL-LPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~-~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+|++||+|+|||+||+...+. .+.....+.+ .+|++++++|||+++|.|+|++++++++.+... .+.|.+...
T Consensus 256 la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~g~~~- 329 (456)
T 2z67_A 256 ICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYPGRAS- 329 (456)
T ss_dssp HHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSCSCBC-
T ss_pred HHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCCCCCC-
Confidence 999999999999999865541 1221112222 469999999999999999999999766544432 122221100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+ ..++.+++++..++.+|++++.++..++++++.
T Consensus 330 --------------------------------~--------------~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~ 363 (456)
T 2z67_A 330 --------------------------------A--------------TPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLD 363 (456)
T ss_dssp --------------------------------S--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------C--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 114678888888899999999999999999999
Q ss_pred HHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe--------E---ECCeeEEEEEecCCCC
Q psy3048 267 DLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA--------S---FQGRPFLRFVVTSPET 332 (367)
Q Consensus 267 ~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--------~---~~~~~~lRi~~~~~~~ 332 (367)
++|++++ |+.++.++ +.++|++..... ..++.++|.++|+..+... . .....++|+++ ..++
T Consensus 364 ~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~-~~~~ 439 (456)
T 2z67_A 364 ELLNDLSKKTGGKFLDVE--SPIASCISVNSD-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNA-AIGV 439 (456)
T ss_dssp HHHHHHHHHSSCCBCCCC--CSSEEEEECSSC-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEEC-CTTC
T ss_pred HHHHhcccccCCEecCCC--CeEEEEEecccH-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhh-hcCC
Confidence 9999886 76665444 888888732111 4578888888873111111 0 11236899965 6788
Q ss_pred CHHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQS 348 (367)
Q Consensus 333 ~~edid~li~~l~~~~ 348 (367)
+++|||+++++|++++
T Consensus 440 t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 440 RTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998753
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=5.2e-26 Score=217.03 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=200.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+-.|++++.+|.++..+++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.++
T Consensus 123 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~~l 196 (397)
T 3f9t_A 123 HPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDV------DGIIGIAGTTELGTIDNIEELSKI 196 (397)
T ss_dssp SCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCC------CEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred CeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCC------eEEEEECCCCCCCCCCCHHHHHHH
Confidence 55788889999999999999999999999988899999999999987 44 488889999999999999999999
Q ss_pred HhhcCcEEEEecccccccccCh-----------hhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLP-----------EYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~-----------~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
|++||+++++|++|+++.+... ...... .+|++++++||++.+|.++|+++++++..... +...
T Consensus 197 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~-~~~~ 271 (397)
T 3f9t_A 197 AKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL----GVDSITIDPHKMGHCPIPSGGILFKDIGYKRY-LDVD 271 (397)
T ss_dssp HHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG----TCSEEECCTTTTTCCCSSCEEEEESSGGGGGG-TCEE
T ss_pred HHHhCCeEEEEccccchhhhhcccccccccccccccccc----cCCeEEEccccccCCCCCceEEEEeCHHHHHh-hccC
Confidence 9999999999999987654211 111111 45999999999999999999999977654432 1111
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccc-cccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSR-RFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
.+|+..... .....++ ....+.++++++.++..+++++.+
T Consensus 272 ~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 312 (397)
T 3f9t_A 272 APYLTETRQ---------------------------------------ATILGTRVGFGGACTYAVLRYLGREGQRKIVN 312 (397)
T ss_dssp CTTSSSSEE---------------------------------------CSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCc---------------------------------------cccccccccchHHHHHHHHHHHhHHHHHHHHH
Confidence 233322111 0000000 123467778888888889999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHH
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~ed 336 (367)
+..++++++.+.|+++ |++++.++..+.++|..+. ..++.+.|.++|+. +.+. ..+.++|+++ ...++++|
T Consensus 313 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~-v~~~--~~~~~~Ri~~-~~~~~~e~ 383 (397)
T 3f9t_A 313 ECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED----YKEVCKKLRDRGIY-VSVC--NCVKALRIVV-MPHIKREH 383 (397)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT----HHHHHHHHHHTTCB-CEEC--SSSSEEEEEC-CTTCCHHH
T ss_pred HHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC----HHHHHHHHHhCCeE-Eecc--CCCCEEEEEE-cCCCCHHH
Confidence 9999999999999998 8887777788888887653 56888999989854 4332 2246999976 57788999
Q ss_pred HHHHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQSS 349 (367)
Q Consensus 337 id~li~~l~~~~~ 349 (367)
+++++++|+++++
T Consensus 384 i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 384 IDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998754
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.94 E-value=8.2e-26 Score=217.56 Aligned_cols=267 Identities=17% Similarity=0.138 Sum_probs=186.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEec---CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~---~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|++++.+|.|+.+++.+.|++++.|++ ++.+.+|++.|+++|++... ..+.+|+.+.+++.+|.++||++|+++
T Consensus 146 ~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~i 223 (450)
T 3bc8_A 146 YIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVI 223 (450)
T ss_dssp EEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHH
Confidence 4555688999999999999999988877 45699999999999988641 124556665444445689999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCC--CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGL--EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
||+||+|+|||+|||+...+...... .++ +.+|+++.|+|||+.+|.|++++++++++.+.... ..|.....
T Consensus 224 a~~~gi~l~VD~A~G~~~~~~~~l~~--~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~s- 297 (450)
T 3bc8_A 224 CANYDIPHVVNNAYGLQSSKCMHLIQ--QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRAS- 297 (450)
T ss_dssp HHHHTCCEEEECTTTTTCHHHHHHHH--HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCBC-
T ss_pred HHHCCCeEEEECCCchhhhhhHhHHH--HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCCc-
Confidence 99999999999999987654433221 112 46799999999999999999999998776654331 12221100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+ ...+.+|..+..+|.+++++.+++..+++++++
T Consensus 298 --------------------------------------------~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~ 331 (450)
T 3bc8_A 298 --------------------------------------------A--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLS 331 (450)
T ss_dssp --------------------------------------------S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 113788988888899999999999999999999
Q ss_pred HHhcCCC---CeEEeCCCCce-eEEEEEcCC----chHHHHHHHHHhccC---cEEE----------EEe-------EEC
Q psy3048 267 DLVEKDD---RFELVCPPSMG-LVCFRLKGD----NDLTNQLYERLMSHK---QIYI----------IKA-------SFQ 318 (367)
Q Consensus 267 ~~L~~~~---g~~~~~~~~~~-~v~f~~~~~----~~~~~~l~~~L~~~g---~~~~----------~~~-------~~~ 318 (367)
++|++++ |+.++..+..+ ...+.+... +...-++.-.+...| .-.. .-. ...
T Consensus 332 ~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~ 411 (450)
T 3bc8_A 332 TQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNY 411 (450)
T ss_dssp HHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCC
T ss_pred HHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecC
Confidence 9999988 88887754322 222333210 112234444444333 1111 000 011
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+..++=+ ...+.++++|+++|+++|+++.++..+
T Consensus 412 ~~~~i~~-~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 412 PCAYLNA-AAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp SSCEEEE-ECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEE-EecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2334444 457888999999999999999776644
No 15
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=2.8e-25 Score=213.57 Aligned_cols=295 Identities=13% Similarity=0.028 Sum_probs=199.1
Q ss_pred CceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 29 SRLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 29 ~~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
++-.|++++.+|++ +...++..|++++.++.++++.+|+++|++++++.. +.+|++++++|++|.+.|+++|.
T Consensus 87 ~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~ 161 (411)
T 3nnk_A 87 PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIR-----PRLLLTVQGDTSTTMLQPLAELG 161 (411)
T ss_dssp TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCC-----CeEEEEeCCCCCcceeccHHHHH
Confidence 34467777889988 888888899999999998889999999999998631 24888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhcc---CCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFF---TDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~---~~~~yl~~ 183 (367)
++|++||+++++|++|+.+....+... . .+|++++++|||+++|.|+|+++++++ ....... ..+.+...
T Consensus 162 ~l~~~~~~~li~Dea~~~~~~~~~~~~---~---~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~ 234 (411)
T 3nnk_A 162 EICRRYDALFYTDATASLGGNPLETDV---W---GLDAVSAGMQKCLGGPSGTSPITLSAR-MEEAIRRRKCVEEGIRTD 234 (411)
T ss_dssp HHHHHHTCEEEEECTTTBTTBCCCTTT---T---TCSEEECCSTTTTCCCSSEEEEEECHH-HHHHHHTTCCCCGGGCCT
T ss_pred HHHHHcCCEEEEECCcccCCcccchhc---c---CCcEEEecCccccCCCCceEEEEECHH-HHHHHhhccccccccccc
Confidence 999999999999999987655332111 1 359999999999999999999998653 2222211 12222222
Q ss_pred CCCC-C-CCCCCCc-hhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 184 TDAP-M-NTQSPDY-TVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 184 ~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
.... . ......| ....|.+. +.. ..+...........++.++++.+..+|++++.++..+
T Consensus 235 ~~~gg~~~~~~~~~~~~~~~~~~-------~~~----------~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 297 (411)
T 3nnk_A 235 AHRDGDEEMIYSNYFDLGMVMDY-------WGP----------ERLNHHTEATTALFGARECARLILQEGLDYGIARHKL 297 (411)
T ss_dssp TCCCCSSCCCSCSTTCHHHHHHH-------HST----------TCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ccccccCCCCcccccchHHHHhh-------hcc----------ccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1100 0 0000000 00000000 000 0001011111233455566777677789999999999
Q ss_pred HHHHHHHHhcCCCCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHH
Q psy3048 261 LAKKFADLVEKDDRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~e 335 (367)
+++++.+.|+++ |+++..++ ..++++|.++. .....++.+.|.++ |+ .+.++. ..+..++|++++...++++
T Consensus 298 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~ 374 (411)
T 3nnk_A 298 HGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQ-GINGDQARKLMLEDFGI-EIGTSFGPLHGKVWRIGTMGYNARKD 374 (411)
T ss_dssp HHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCT-TCCHHHHHHHHHHHHSE-EEEECCGGGTTTEEEEECCGGGCSHH
T ss_pred HHHHHHHHHHHc-CCEeCCCcccccccEEEEECCC-CCCHHHHHHHHHHhcCe-EEeCccCCCCCCEEEEeCccCcCCHH
Confidence 999999999987 88876543 24677787753 22356888888877 74 444332 1234599997644566899
Q ss_pred HHHHHHHHHHHHHHHhhCCC
Q psy3048 336 DVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 336 did~li~~l~~~~~~~~~~~ 355 (367)
|+++++++|+++++++....
T Consensus 375 ~i~~~~~~l~~~l~~~~~~~ 394 (411)
T 3nnk_A 375 CVMTTLSALEAVLNYLKFPT 394 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999876544
No 16
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.93 E-value=4.4e-25 Score=212.56 Aligned_cols=290 Identities=12% Similarity=0.051 Sum_probs=194.2
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|++++.+|++ +...++..|++++.++.+.++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 86 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~ 159 (416)
T 3isl_A 86 EDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKP------KIVAMVHGETSTGRIHPLKAIG 159 (416)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCC------SEEEEESEETTTTEECCCHHHH
T ss_pred CCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCC------cEEEEEccCCCCceecCHHHHH
Confidence 3466667789998 7778888999999999988899999999999984 44 4889999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC---c-----
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD---R----- 178 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~---~----- 178 (367)
++|++||+++++|++|+.+....+... . .+|++++++|||+++|.|+|+++.+++ ......... .
T Consensus 160 ~l~~~~~~~li~D~a~~~~~~~~~~~~---~---~~d~~~~s~~K~l~g~~g~g~~~~~~~-~~~~~~~~~~~~~Gw~~~ 232 (416)
T 3isl_A 160 EACRTEDALFIVDAVATIGGCEVKVDE---W---KIDAAIGGTQKCLSVPSGMAPITYNER-VADVIAARKKVERGIATQ 232 (416)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCTTT---T---TCSEEECCSSSTTCCCSSEEEEEECHH-HHHHHHTC----------
T ss_pred HHHHHcCCEEEEECCccccCCCcchhh---c---CCCEEEecCccccCCCCCeEEEEECHH-HHHHhhcccccccccccc
Confidence 999999999999999986655332110 1 359999999999999999999988653 232221110 0
Q ss_pred ---cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHH
Q psy3048 179 ---VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 179 ---~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
++...+.. .....+....|.... .. ..+...........++.++++.+...|++++.
T Consensus 233 ~~~~~~~gg~~---~~~~~~~~~~~~~~~------------~~-----~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (416)
T 3isl_A 233 ADRAALSGNRP---ITSNYFDLSQLEDYW------------SE-----RRLNHHTEATTMLYALREGVRLVLEEGLETRF 292 (416)
T ss_dssp --------CCC---CSCSTTCHHHHHHHT------------ST-----TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ccchhccCCCC---CCccccchHHHHhhh------------cc-----cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 11111100 000000000110000 00 00010011112334556677776677799999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCC
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSP 330 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~ 330 (367)
++..++++++.+.|+++ |+++..++. .++++|.++. .....++.+.|.++ |+ .+.++. ..+..++|++++..
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gi-~v~~g~~~~~~~~iRi~~~~~ 369 (416)
T 3isl_A 293 ERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPG-GIDGESVRDMLLAQFGI-EIASSFGPLAGKIWRIGTMGY 369 (416)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCE-ECBCCCSTTTTTEEEEECCGG
T ss_pred HHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCC-CCCHHHHHHHHHHhCCE-EEecCCCCCCCCEEEEecccC
Confidence 99999999999999996 888776542 4677788753 22367889999887 74 443322 12356999976433
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
.+.++|+++++++|+++++++....
T Consensus 370 ~~~~e~i~~~~~~l~~~~~~~~~~~ 394 (416)
T 3isl_A 370 SCRKENVLFVLAGLEAVLLRHNAGI 394 (416)
T ss_dssp GCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCc
Confidence 4444559999999999999875443
No 17
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=1.9e-24 Score=211.93 Aligned_cols=284 Identities=12% Similarity=0.051 Sum_probs=195.5
Q ss_pred CceEEEecCCcchhH----HHHHHhCCcce-----EEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc
Q psy3048 29 SRLVAYASDQSNSSV----EKSAIIGDVPV-----RQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF 99 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~----~~~~~~~g~~v-----~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i 99 (367)
++..|++++.+|.+. ...++..|+++ ..++.+.++.+|+++|++++++.+. .+.+|++++++|++|.+
T Consensus 154 ~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~---~~~lv~~~~~~n~tG~~ 230 (465)
T 3e9k_A 154 KRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD---SIAVILFSGVHFYTGQH 230 (465)
T ss_dssp SSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG---GEEEEEEESBCTTTCBB
T ss_pred CCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC---CeEEEEEeCcccCccee
Confidence 355688899999884 44666788875 3345556799999999999985421 13689999999999999
Q ss_pred CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCc
Q psy3048 100 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 100 ~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
.|+++|.++||+||+++++|++|+.+..+.+.... .+|++++++||+++ +|.|+|++++++. ..........
T Consensus 231 ~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~------~~D~~~~s~~K~l~~gp~~~g~l~~~~~-~~~~~~~~~~ 303 (465)
T 3e9k_A 231 FNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW------GVDFACWCSYKYLNAGAGGIAGAFIHEK-HAHTIKPALV 303 (465)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCCEEEECSSSTTCCCTTCCCEEEECGG-GTTTSCCSSC
T ss_pred ecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc------CCCEEEECcccccccCCCceEEEEEcHH-HHhhcCCccc
Confidence 99999999999999999999999987765543222 34999999999995 6777899998543 2322111111
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
++........+.....+ ....+. ..+...........++.+++..+...|++++.++.
T Consensus 304 g~~~~~~~~~~~~~~~~-------------------~~~~~~---~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~ 361 (465)
T 3e9k_A 304 GWFGHELSTRFKMDNKL-------------------QLIPGV---CGFRISNPPILLVCSLHASLEIFKQATMKALRKKS 361 (465)
T ss_dssp CGGGBCHHHHTTCCSCC-------------------CBCSSG---GGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CccCCCCCcccccCCCc-------------------CcCCCh---HHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 11111000000000000 000000 11222222223456777888887777899999999
Q ss_pred HHHHHHHHHHhcCC----------CCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEE
Q psy3048 259 ISLAKKFADLVEKD----------DRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLR 324 (367)
Q Consensus 259 ~~la~~l~~~L~~~----------~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 324 (367)
.++++++.+.|+++ +|++++.|+ ..+.++|+++. + ..++.+.|.++|++ +. ..++.++|
T Consensus 362 ~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~-~--~~~l~~~L~~~Gi~-v~---~~~~~~iR 434 (465)
T 3e9k_A 362 VLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV-P--NKDVFQELEKRGVV-CD---KRNPNGIR 434 (465)
T ss_dssp HHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-T--TCCHHHHHHTTTEE-CE---EETTTEEE
T ss_pred HHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-C--HHHHHHHHHHCCEE-Ee---cCCCCEEE
Confidence 99999999999885 799988764 26778888762 2 45788889989854 32 34457999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+++...+++++||++++++|++++++.
T Consensus 435 is~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 435 VAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp EBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred EeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 976578999999999999999987653
No 18
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=4.7e-24 Score=202.43 Aligned_cols=263 Identities=12% Similarity=0.055 Sum_probs=189.7
Q ss_pred CceEEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 29 SRLVAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
++-.|++++.+|.++..++.. .|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 87 ~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~~~i 160 (382)
T 4hvk_A 87 KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDT------ILVSVQHANNEIGTIQPVEEI 160 (382)
T ss_dssp GCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTE------EEEECCSBCTTTCBBCCHHHH
T ss_pred CCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCc------eEEEEECCCCCceeeCCHHHH
Confidence 345778888999999887665 59999999998889999999999997654 589999999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
.++|++||+ +++|++|+.+....+... .+ +|++++++||+ .+|.|+|++++++...+. .++....
T Consensus 161 ~~l~~~~~~-li~D~a~~~~~~~~~~~~---~~---~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~-------~~~~~~~ 225 (382)
T 4hvk_A 161 SEVLAGKAA-LHIDATASVGQIEVDVEK---IG---ADMLTISSNDI-YGPKGVGALWIRKEAKLQ-------PVILGGG 225 (382)
T ss_dssp HHHHSSSSE-EEEECTTTBTTBCCCHHH---HT---CSEEEEESGGG-TSCTTCEEEEEETTCCCC-------CSSCSSC
T ss_pred HHHHHHcCE-EEEEhHHhcCCCCCCchh---cC---CCEEEEeHHHh-cCCCceEEEEEcCccCcC-------cccccCC
Confidence 999999999 999999987655433211 12 49999999996 468899999997653111 1111110
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
. . ..+............+.+++.. ..++++++.++..++++++
T Consensus 226 ~-----~-------------------------------~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l 268 (382)
T 4hvk_A 226 Q-----E-------------------------------NGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRI 268 (382)
T ss_dssp T-----G-------------------------------GGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred C-----c-------------------------------CccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHH
Confidence 0 0 0000000011122333444443 3468899999999999999
Q ss_pred HHHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-EC--C-----------------eeE
Q psy3048 266 ADLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQ--G-----------------RPF 322 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~--~-----------------~~~ 322 (367)
.+.|++++|+++..++. .+.+.|.+++. ...++.+.|.++|+. +.++. +. . ..+
T Consensus 269 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (382)
T 4hvk_A 269 IDNVLKIEESYLNGHPEKRLPNNVNVRFSYI--EGESIVLSLDMAGIQ-ASTGSACSSKTLQPSHVLMACGLKHEEAHGT 345 (382)
T ss_dssp HHHHTTSTTEEECSCSSSBCTTEEEEEETTC--CHHHHHHHHHHTTCB-CBCC--------CCCHHHHHTTCCHHHHHTE
T ss_pred HHHHhcCCCeEEeCCccccCCCEEEEEECCC--CHHHHHHHHHHCCEE-EeeCCccCCCCCcchHHHHHcCCChhhcCCe
Confidence 99999999999876542 35778887642 356888889888854 32221 10 0 468
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+|+++ ...++++|+++++++|+++++++.+
T Consensus 346 iRl~~-~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 346 LLLTL-GRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp EEEEC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99976 5778899999999999999988764
No 19
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=207.13 Aligned_cols=274 Identities=16% Similarity=0.130 Sum_probs=192.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec---CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCc-ccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTG-TCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~---~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~-~G~i~dl~~I~ 106 (367)
..|++++..|.|+.+++.+.|+++++|++ ++...+|+++|+++|++... ..+++++++++++ .+.++||++|+
T Consensus 163 d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga---~~i~~V~~Ttt~y~p~~~ddI~eIa 239 (501)
T 3hl2_A 163 KYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGP---DCILCIHSTTSCFAPRVPDRLEELA 239 (501)
T ss_dssp CEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCG---GGEEEEEEECSCCTTBCCCCHHHHH
T ss_pred CEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCC---CcEEEEEecCCCCCCcccccHHHHH
Confidence 45666999999999999999999999988 34589999999999998631 1345555544444 45779999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||+||+++|||+|||+...+...........+++|+++.|.||++.+|.|.+++++++++.+++. ...|.+..
T Consensus 240 eIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yPGr~-- 314 (501)
T 3hl2_A 240 VICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYPGRA-- 314 (501)
T ss_dssp HHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSCSCB--
T ss_pred HHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhCCCCC--
Confidence 9999999999999999998755543322211233579999999999999999888888887766543 11221110
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..+.++.+|+.+..+|.+|+++++++..++++||+
T Consensus 315 ---------------------------------------------S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~ 349 (501)
T 3hl2_A 315 ---------------------------------------------SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLS 349 (501)
T ss_dssp ---------------------------------------------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01335779999999999999999999999999999
Q ss_pred HHhcCCC---CeEEeCCC-CceeEEEEEcCC----chHHHHHHHHHhccCc---EEEEEe--------EE---------C
Q psy3048 267 DLVEKDD---RFELVCPP-SMGLVCFRLKGD----NDLTNQLYERLMSHKQ---IYIIKA--------SF---------Q 318 (367)
Q Consensus 267 ~~L~~~~---g~~~~~~~-~~~~v~f~~~~~----~~~~~~l~~~L~~~g~---~~~~~~--------~~---------~ 318 (367)
++|+++. |-+++..+ ..-.+++.+... +....++-..|..+++ -.+.++ .+ .
T Consensus 350 ~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~ 429 (501)
T 3hl2_A 350 NQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNY 429 (501)
T ss_dssp HHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCC
T ss_pred HHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCC
Confidence 9998853 45566533 222333444321 1123466667776551 112111 11 1
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCCCC
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRGSS 358 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~~~ 358 (367)
...++-++ +....+++|||.|++.|++++.++.++....
T Consensus 430 ~~~yl~~a-~aiG~~~~~v~~~~~~l~~~~~~~~~~~~~~ 468 (501)
T 3hl2_A 430 PCAYLNAA-SAIGMKMQDVDLFIKRLDRCLKAVRKERSKE 468 (501)
T ss_dssp SSCEEEEE-CCTTCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CchHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 24477775 4688899999999999999999887766644
No 20
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=3e-24 Score=204.24 Aligned_cols=283 Identities=14% Similarity=0.082 Sum_probs=195.4
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|++++..|++ +...++..|++++.++.+.++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 77 gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~ 150 (384)
T 3zrp_A 77 NDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEY------KLVALTHVETSTGVREPVKDVI 150 (384)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCE------EEEEEESEETTTTEECCHHHHH
T ss_pred CCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCC------cEEEEeCCCCCCceECcHHHHH
Confidence 3456667788876 5566678899999999988899999999999987 33 5888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhh-cc-CCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNT-FF-TDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~-~~-~~~~yl~~~ 184 (367)
++|++||+++++|++|+.+....+. .. ..+|++++++||++++|.|+|+++.+++ .+... .. ....+.
T Consensus 151 ~l~~~~~~~li~D~a~~~~~~~~~~-----~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~--- 220 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSSVGAEEVKA-----EE-WNVDVYLTASQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYY--- 220 (384)
T ss_dssp HHHGGGEEEEEEECTTTTTTSCCCT-----TT-TTCSEEEEETTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCST---
T ss_pred HHHHhcCCEEEEECcccccCccccc-----cc-cCCCEEEecCcccccCCCceEEEEECHH-HHHHhcCCCCCCccc---
Confidence 9999999999999999866543321 11 1359999999999999999999998653 23221 00 000100
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.+ ...|.... .. ++.+.. ..+ .........++.+++..+...+++++.++..+++++
T Consensus 221 --------~~--~~~~~~~~----~~-~~~~~~------~~~--g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 277 (384)
T 3zrp_A 221 --------LD--LRNWLPVM----RG-AEEGKA------AYF--ATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASA 277 (384)
T ss_dssp --------TC--HHHHHHHH----HH-HHTTCC------CCS--SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred --------cc--HHHHHHHH----Hh-hcccCC------CcC--CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 00 00000000 00 000000 000 001112234555677776677899999999999999
Q ss_pred HHHHhcCCCCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~l 340 (367)
+.+.|+++ |+++..++ ..+++.|++++ ....++.+.|.++|+. +.++......++|+++ ..+++++|++++
T Consensus 278 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~-v~~g~~~~~~~iRi~~-~~~~~~e~i~~~ 352 (384)
T 3zrp_A 278 IRAGLEAL-GLEIVARRPESYSNTVTGVILKV--ADPQKVLAGTVNEGVE-FAPGVHPAFKYFRIGH-MGWVTPNDAIIA 352 (384)
T ss_dssp HHHHHHHT-TCCBSCSSGGGBCSSEEEEECSS--SCHHHHHHHHHTTTCC-CEECCCTTCCEEEEEC-CSSCCHHHHHHH
T ss_pred HHHHHHHC-CCeEccCcccccCccEEEEECCC--CCHHHHHHHHHHCCEE-EecCCCCCcCEEEEec-cccCCHHHHHHH
Confidence 99999998 88876654 34566787764 3367899999999854 4333212226899975 566889999999
Q ss_pred HHHHHHHHHHhhCCCC
Q psy3048 341 WNEISHQSSEMNLPRG 356 (367)
Q Consensus 341 i~~l~~~~~~~~~~~~ 356 (367)
+++|+++++++.....
T Consensus 353 ~~~l~~~l~~~~~~~~ 368 (384)
T 3zrp_A 353 ISVIERTLRKLGEPIR 368 (384)
T ss_dssp HHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHcCCCcC
Confidence 9999999998765443
No 21
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=3.3e-24 Score=201.49 Aligned_cols=269 Identities=13% Similarity=0.053 Sum_probs=185.0
Q ss_pred EEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|++++.+|++. ...++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.++
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~i~~l 149 (353)
T 2yrr_A 76 PVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRY------RMVALVHGETSTGVLNPAEAIGAL 149 (353)
T ss_dssp CEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCC------SEEEEESEETTTTEECCHHHHHHH
T ss_pred cEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCC------CEEEEEccCCCcceecCHHHHHHH
Confidence 466667788884 556677899999999988889999999999987 43 478889999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCc-cccccCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDR-VYLKHTDAP 187 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~-~yl~~~~~~ 187 (367)
|++||+++++|++|+.+....+. .. .+ +|++++++|||+++|+|+|+++++++ .+... ...+ .|+...
T Consensus 150 ~~~~~~~li~D~a~~~~~~~~~~-~~--~~---~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~l-~~~~~~~~~~~--- 218 (353)
T 2yrr_A 150 AKEAGALFFLDAVTTLGMLPFSM-RA--MG---VDYAFTGSQKCLSAPPGLAPIAASLE-ARKAF-TGKRGWYLDLA--- 218 (353)
T ss_dssp HHHHTCEEEEECTTTTTTSCCCH-HH--HT---CSEEECCTTSTTCCCSSCEEEEECHH-HHHHC-CCCSCSTTCHH---
T ss_pred HHHcCCeEEEEcCcccccccccc-cc--cC---ceEEEecCcccccCCCceEEEEECHH-HHHHh-ccCCCccccHH---
Confidence 99999999999999755433221 11 12 49999999999999999999998653 23221 1001 111000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
.+.+. ..... ..++ .......++.++++.+...|++++.++..++++++.+
T Consensus 219 -----------~~~~~--------~~~~~-------~~~~---~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 269 (353)
T 2yrr_A 219 -----------RVAEH--------WERGG-------YHHT---TPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLE 269 (353)
T ss_dssp -----------HHHHH--------HTTCC-------CSSC---CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -----------HHhhh--------hhcCC-------CCCC---CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 00000 00000 0000 0111224445666666666788999999999999999
Q ss_pred HhcCCCCeEEeCCC--CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH-HHHHH
Q psy3048 268 LVEKDDRFELVCPP--SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA-FAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid-~li~~ 343 (367)
.|+++ |+++..++ ...+++|+++. .....++.+.|.++|+ .+.+.. .....++|+++ +.+++++|++ +++++
T Consensus 270 ~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~~~ 345 (353)
T 2yrr_A 270 ELKAR-GFRPYPKASPLPTVLVVRPPE-GVDADRLVRALYAEGV-AVAGGIGPTRGQVLRLGL-MGEGARREAYQAFLKA 345 (353)
T ss_dssp HHHHT-TCEESCSSSBCTTEEEEECCT-TCCHHHHHHHHHHTTE-ECEECCGGGTTTCEEEEC-SGGGSCHHHHHHHHHH
T ss_pred HHHHC-CCccccCccCCCeEEEEECCC-CCCHHHHHHHHHHCCE-EEeCCccccCCCeEEEec-CccCCHHHHHHHHHHH
Confidence 99987 89887643 34556787752 2235689999998874 443322 22346899975 4566788898 99999
Q ss_pred HHHHHHH
Q psy3048 344 ISHQSSE 350 (367)
Q Consensus 344 l~~~~~~ 350 (367)
|++++++
T Consensus 346 l~~~l~~ 352 (353)
T 2yrr_A 346 LDRALAL 352 (353)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998764
No 22
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=3.5e-24 Score=204.41 Aligned_cols=284 Identities=11% Similarity=0.057 Sum_probs=189.2
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|+++..+|++ +...++..|++++.++.+.++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 98 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~ 171 (393)
T 3kgw_A 98 GDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKP------VLLFLVHGESSTGVVQPLDGFG 171 (393)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCC------SEEEEESEETTTTEECCCTTHH
T ss_pred CCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCC------cEEEEeccCCcchhhccHHHHH
Confidence 3345555677764 4677778999999999988889999999999987 44 4889999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|++||+++++|++|+.+....+.. -..+|++++++||++++|.|+|+++.+++ .............
T Consensus 172 ~l~~~~~~~li~De~~~~g~~~~~~~------~~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~----- 239 (393)
T 3kgw_A 172 ELCHRYQCLLLVDSVASLGGVPIYMD------QQGIDIMYSSSQKVLNAPPGISLISFNDK-AKYKVYSRKTKPV----- 239 (393)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCTT------TTTCCEEEEESSSTTCCCSSCEEEEECHH-HHHHHHTCSSCCS-----
T ss_pred HHHHHcCCEEEEECCccccCcccchh------hcCCCEEEecCcccccCCCceeEEEECHH-HHHHHhccCCCCC-----
Confidence 99999999999999998554332210 11359999999999999999999998543 2322211110000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
....++ ..+ .. .+..... ..+...........++.+++..+..++++++.++..++++++.
T Consensus 240 ---~~~~~~--~~~-~~-------~~~~~~~------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 300 (393)
T 3kgw_A 240 ---SFYTDI--TYL-AK-------LWGCEGE------TRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLH 300 (393)
T ss_dssp ---CSTTCH--HHH-HH-------HTTCSSS------CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ---ceeecH--HHH-HH-------hhhhccc------cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 000000 000 00 0000000 0000111111223455566666667788999999999999999
Q ss_pred HHhcCCCCeEEeCCC---C-ceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPP---S-MGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~---~-~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~l 340 (367)
+.|+++ |+++..++ . ..+++|.++. .....++.++|.++ |+ .+.++. ..+..++|++++...++++|++++
T Consensus 301 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~ 377 (393)
T 3kgw_A 301 KHLQEM-GLKFFVKDPEIRLPTITTVTVPA-GYNWRDIVSYVLDHFSI-EISGGLGPTEERVLRIGLLGYNATTENVDRV 377 (393)
T ss_dssp HHHHHT-TCCBSSSSGGGBCSSEEEEECCT-TBCHHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCCHHHHHHH
T ss_pred HHHHHc-CCeeccCChhhcCCeEEEEeCCC-CCCHHHHHHHHHHhCCE-EEeCCcccCCCCEEEEEecccCCCHHHHHHH
Confidence 999998 88876432 2 3455677653 23467889999888 74 343322 123568999753344589999999
Q ss_pred HHHHHHHHHHhhC
Q psy3048 341 WNEISHQSSEMNL 353 (367)
Q Consensus 341 i~~l~~~~~~~~~ 353 (367)
+++|+++++++.+
T Consensus 378 ~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 378 AEALREALQHCPK 390 (393)
T ss_dssp HHHHHHHHHHSCB
T ss_pred HHHHHHHHHhhhh
Confidence 9999999987643
No 23
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=7.2e-24 Score=201.87 Aligned_cols=277 Identities=13% Similarity=0.032 Sum_probs=192.5
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+-.|++++.+|++ +...++..|++++.++.+.++.+|+++|++++++.. .+.+|++++++|++|.+.|+++|.+
T Consensus 95 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~ 170 (386)
T 2dr1_A 95 GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNP----DVEAVTITYNETSTGVLNPLPELAK 170 (386)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHH
T ss_pred CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCC----CCcEEEEEeecCCcchhCCHHHHHH
Confidence 3467777889998 888888899999999998888999999999996421 1357888899999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~ 186 (367)
+|++||+++++|++|+.+....+. ... .+|+++.++||++++|.|+|++++++. ........ ...+.
T Consensus 171 l~~~~~~~li~D~a~~~~~~~~~~-----~~~-~~di~~~s~sK~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~----- 238 (386)
T 2dr1_A 171 VAKEHDKLVFVDAVSAMGGADIKF-----DKW-GLDVVFSSSQKAFGVPPGLAIGAFSER-FLEIAEKMPERGWY----- 238 (386)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCT-----TTT-TCSEEEEETTSTTCCCSSCEEEEECHH-HHHHHTTCTTCCST-----
T ss_pred HHHHcCCeEEEEccccccCccccc-----ccc-CCcEEEEeccccccCCCceEEEEECHH-HHHHHhcCCCCceE-----
Confidence 999999999999999876553221 111 359999999999999988999998643 33221100 00000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhcc-CCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLN-CSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKK 264 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~ 264 (367)
.++ ..+... .. .. .............+..+++.+... +++++.++..+++++
T Consensus 239 ------~~~--~~~~~~--------~~~~~----------~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~ 292 (386)
T 2dr1_A 239 ------FDI--PLYVKY--------LKEKE----------STPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKM 292 (386)
T ss_dssp ------TCH--HHHHHH--------HHHHS----------SCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------EeH--HHHHHh--------hccCC----------CCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 000 000000 00 00 000001112234555666665555 688999999999999
Q ss_pred HHHHhcCCCCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~l 340 (367)
+.+.|+++ |+++..++ ..++++++++. .....++.+.|.++|+ .+.+... .+..++|+++ ..+++++|++++
T Consensus 293 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~-~~~~~~~~i~~~ 368 (386)
T 2dr1_A 293 VREGVREI-GLDILAEPGHESPTITAVLTPP-GIKGDEVYEAMRKRGF-ELAKGYGSVKEKTFRIGH-MGYMKFEDIQEM 368 (386)
T ss_dssp HHHHHHHT-TCCBSSCTTCBCSSEEEEECCT-TCCHHHHHHHHHHTTE-ECEECCGGGTTTEEEEEC-CSSCCHHHHHHH
T ss_pred HHHHHHHc-CCeeCcCccccCCceEEEEcCC-CCCHHHHHHHHHHCCe-EEecCccccCCCEEEEEC-CCCCCHHHHHHH
Confidence 99999988 88776543 35677787753 2235688999998874 4443321 1346899976 457899999999
Q ss_pred HHHHHHHHHHhh
Q psy3048 341 WNEISHQSSEMN 352 (367)
Q Consensus 341 i~~l~~~~~~~~ 352 (367)
+++|+++++++.
T Consensus 369 ~~~l~~~~~~~~ 380 (386)
T 2dr1_A 369 LDNLREVINELK 380 (386)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC
Confidence 999999988764
No 24
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=4.5e-24 Score=204.08 Aligned_cols=282 Identities=15% Similarity=0.103 Sum_probs=186.9
Q ss_pred ceEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|++. ...++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 94 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~ 167 (393)
T 2huf_A 94 GDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKP------SVLFLTQGDSSTGVLQGLEGVG 167 (393)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCC------SEEEEESEETTTTEECCCTTHH
T ss_pred CCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCC------cEEEEEccCCCccccCCHHHHH
Confidence 34567777888884 334556899999999987889999999999987 44 4788899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC---Ccccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT---DRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~---~~~yl~~ 183 (367)
++|++||+++++|++|+.+....+ . ... .+|+++.++||++++|+|+|++++++ +........ ..+|...
T Consensus 168 ~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~sK~l~g~~G~G~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (393)
T 2huf_A 168 ALCHQHNCLLIVDTVASLGGAPMF-M----DRW-EIDAMYTGSQKVLGAPPGITPVSFSH-RAVERYKRRNTKVKVYYWD 240 (393)
T ss_dssp HHHHHTTCEEEEECTTTBTTBCCC-T----TTT-TCSEEECCSSSTTCCCSSCEEEEECH-HHHHHHHTCSSCCSCGGGC
T ss_pred HHHHHcCCEEEEEcccccCCCCcc-h----hhc-CccEEEECCCcccccCCCeEEEEECH-HHHHHHhhcCCCCceEEEc
Confidence 999999999999999976544322 1 111 35999999999999999999998853 333322111 1111100
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
... ..++ +.. ... ..+...........++.++++.+..++++++.++..++++
T Consensus 241 ~~~----------~~~~-----------~~~-~~~-----~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 293 (393)
T 2huf_A 241 MSL----------VGDY-----------WGC-FGR-----PRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAK 293 (393)
T ss_dssp HHH----------HHHH-----------TTC-SSS-----CCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hHH----------HHhh-----------hcc-ccc-----cCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 000 0000 000 000 0000001111122344456666555678889999999999
Q ss_pred HHHHHhcCCCCeEEeCCC--Cc-eeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE-CCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPP--SM-GLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF-QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~--~~-~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|+++ |+++..++ .. .++.++++. .....++.++|.++ |+ .+.+... .+..++|++++...++++|++
T Consensus 294 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~~gi-~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~ 370 (393)
T 2huf_A 294 RLYRGLQDA-GFELYADPKDRLSTVTTIKVPQ-GVDWLKAAQYAMKTYLV-EISGGLGPTAGQVFRIGLMGQNATTERVD 370 (393)
T ss_dssp HHHHHHHHT-TCCBSSCGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCSHHHHH
T ss_pred HHHHHHHHc-CCeeccCccccCCcEEEEEcCC-CCCHHHHHHHHHHhCCE-EEecCcccccCCEEEEEcccCcCCHHHHH
Confidence 999999988 88776543 23 367777752 22356888888765 74 4433221 234689997633345799999
Q ss_pred HHHHHHHHHHHHhhCC
Q psy3048 339 FAWNEISHQSSEMNLP 354 (367)
Q Consensus 339 ~li~~l~~~~~~~~~~ 354 (367)
+++++|+++++++..+
T Consensus 371 ~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 371 RVLQVFQEAVAAVKPD 386 (393)
T ss_dssp HHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999887654
No 25
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.92 E-value=1.3e-23 Score=198.26 Aligned_cols=279 Identities=13% Similarity=0.108 Sum_probs=188.9
Q ss_pred CceEEEecCCcchh-HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 29 SRLVAYASDQSNSS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 29 ~~~~v~~s~~~H~s-~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
++.+++++...|.+ +...+...|++++.++.++++.+|+++|++++++..+ +.+|++++++|++|.+.|+++|.+
T Consensus 80 gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~nptG~~~~l~~i~~ 155 (366)
T 1m32_A 80 QDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPT----ISHIAMVHSETTTGMLNPIDEVGA 155 (366)
T ss_dssp TCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTT----CCEEEEESEETTTTEECCHHHHHH
T ss_pred CCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCC----eEEEEEecccCCcceecCHHHHHH
Confidence 35677777788876 5566777899999999988889999999999987421 347778889999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+|++||+++++|++|+.+....+. ... ..|+++.++||++++|.|+|+++.++. ..........++.....
T Consensus 156 l~~~~~~~li~Dea~~~~~~~~~~-----~~~-~~di~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~-- 226 (366)
T 1m32_A 156 LAHRYGKTYIVDAMSSFGGIPMDI-----AAL-HIDYLISSANKCIQGVPGFAFVIAREQ-KLAACKGHSRSLSLDLY-- 226 (366)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCT-----TTT-TCSEEEEESSSTTCCCSSEEEEEEEHH-HHTTCTTCCSCSTTCHH--
T ss_pred HHHHcCCEEEEECCccccCcCccc-----ccc-CccEEEecCcccccCCCceEEEEECHH-HHHhhcCCCCCccccHH--
Confidence 999999999999999865443221 111 359999999999988999999998653 22221111011110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~ 266 (367)
..|.+ +...... ..++ ........+.++++.+...| ++++.++..++++++.
T Consensus 227 ----------~~~~~---------~~~~~~~-----~~~~---~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~ 279 (366)
T 1m32_A 227 ----------AQWRC---------MEDNHGK-----WRFT---SPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLV 279 (366)
T ss_dssp ----------HHHHH---------HHHTTTC-----CSSC---CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHhh---------hcccCCC-----CCCC---CCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHH
Confidence 00000 0000000 0000 11112234556666665566 8889999999999999
Q ss_pred HHhcCCCCeEEeCCC--Cce-eEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPP--SMG-LVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~--~~~-~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|+++ |+++..++ ..+ .++++++.. .....++.+.|.++|+ .+.+....+..++|+++ ...++++|++++++
T Consensus 280 ~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~ 356 (366)
T 1m32_A 280 AGMRAL-GFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGF-VIYPGKVSQSDCFRIGN-IGEVYAADITALLT 356 (366)
T ss_dssp HHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTE-ECEECCCSSSCEEEEEC-CSSCCHHHHHHHHH
T ss_pred HHHHHC-CCeeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCE-EEECCcCCCCCEEEEec-CCCCCHHHHHHHHH
Confidence 999988 88776542 344 677777520 1235688899998884 45444333567999975 56778999999999
Q ss_pred HHHHHHHH
Q psy3048 343 EISHQSSE 350 (367)
Q Consensus 343 ~l~~~~~~ 350 (367)
+|++++++
T Consensus 357 ~l~~~~~~ 364 (366)
T 1m32_A 357 AIRTAMYW 364 (366)
T ss_dssp HHHHHCTT
T ss_pred HHHHHHHh
Confidence 99988653
No 26
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=3e-23 Score=198.76 Aligned_cols=279 Identities=14% Similarity=0.063 Sum_probs=187.6
Q ss_pred ceEEEecCCcchhHH----HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~----~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++.+|.+.. ..++..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 113 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~l~~i 186 (406)
T 1kmj_A 113 GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKT------RLLAITHVSNVLGTENPLAEM 186 (406)
T ss_dssp TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTE------EEEEEESBCTTTCCBCCHHHH
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCC------eEEEEeCCCccccCcCCHHHH
Confidence 446777888887753 3456679999999998889999999999987544 588899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
.++|++||+++++|++|+.+....+. .. . ..|+++.++||++ +|.|+|++++++ +......... .....
T Consensus 187 ~~l~~~~~~~li~D~~~~~g~~~~~~-~~--~---~~d~~~~s~~K~~-g~~G~G~~~~~~-~~~~~~~~~~---~~~~~ 255 (406)
T 1kmj_A 187 ITLAHQHGAKVLVDGAQAVMHHPVDV-QA--L---DCDFYVFSGHKLY-GPTGIGILYVKE-ALLQEMPPWE---GGGSM 255 (406)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCH-HH--H---TCSEEEEEGGGTT-SCTTCEEEEECH-HHHHHCCCSS---CSTTS
T ss_pred HHHHHHcCCEEEEEchhhcCCCCCcc-cc--c---CCCEEEEEchhcc-CCCCcEEEEEeH-HHHhhcCCcc---cCCCc
Confidence 99999999999999999876543321 11 1 2499999999988 688899999853 3333211100 00000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.........+ .|. ..| ..+...........++.++++.+...+++++.++..++++++
T Consensus 256 ~~~~~~~~~~---~~~----~~~---------------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 313 (406)
T 1kmj_A 256 IATVSLSEGT---TWT----KAP---------------WRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYA 313 (406)
T ss_dssp EEEEETTTEE---EEC----CTT---------------GGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred eeeccccccc---ccC----CCc---------------hhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 0000000000 000 000 001111111111233335566655567888999999999999
Q ss_pred HHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------CCeeEEEEEecCCCCCHH
Q psy3048 266 ADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------QGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~~~e 335 (367)
.+.|++++|+++..++ ..+++.|.+++ ....++.+.|.++|+ .+.++.. ..+.++|+++ ..+++++
T Consensus 314 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi-~v~~g~~~~~~~~~~~g~~~~iRis~-~~~~t~~ 389 (406)
T 1kmj_A 314 LSQLESVPDLTLYGPQNRLGVIAFNLGK--HHAYDVGSFLDNYGI-AVRTGHHCAMPLMAYYNVPAMCRASL-AMYNTHE 389 (406)
T ss_dssp HHHHTTSTTEEEESCTTCCSEEEEEETT--CCHHHHHHHHHHTTE-ECEEECTTCHHHHHHTTCSCEEEEEC-CTTCCHH
T ss_pred HHHHhcCCCeEEecCCCcCCEEEEEECC--CCHHHHHHHHhhCCc-EEEeccccchHHHHhcCCCCeEEEEe-ecCCCHH
Confidence 9999999899987653 56778887753 225678888888885 3433321 1246999976 5778999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy3048 336 DVAFAWNEISHQSSEM 351 (367)
Q Consensus 336 did~li~~l~~~~~~~ 351 (367)
|+++++++|+++++.+
T Consensus 390 ~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 390 EVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 27
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.92 E-value=1.7e-23 Score=205.76 Aligned_cols=275 Identities=16% Similarity=0.180 Sum_probs=187.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl~~I~~l 108 (367)
+..|++++..|.+...++...|++++.|++++++.+|+++|++++++++ .+|+++++ |++|.+ +|+++|+++
T Consensus 156 r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t------~~v~~~~p-n~~G~~~~~l~~i~~l 228 (474)
T 1wyu_B 156 RRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPHV------AALMLTNP-NTLGLFERRILEISRL 228 (474)
T ss_dssp CCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTE------EEEEECSS-CTTSCCCTTHHHHHHH
T ss_pred CCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCCc------eEEEEECC-CCCcccCCCHHHHHHH
Confidence 5578888999999999999999999999998889999999999997655 47778876 579999 799999999
Q ss_pred HhhcCcEEEEecccccccc-cChhhhhhhCCCCCcceeeeccccccccCC-----cceeEEEecchhhhhhccCCccccc
Q psy3048 109 CQEYNIWLHVDAAYAGSAL-LLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-----DCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~-~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|++||+++|+|++|+.+.+ ..+... .+ +|++++++||+++.|. |+|++++++. .... +. ..++.
T Consensus 229 ~~~~g~~li~Dea~~~~~~g~~~~~~---~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~~-l~--~~~~~ 298 (474)
T 1wyu_B 229 CKEAGVQLYYDGANLNAIMGWARPGD---MG---FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LAPY-LP--VPLVE 298 (474)
T ss_dssp HHHHTCEEEEEGGGGGGTTTTCCHHH---HT---CSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GGGG-CC--SCEEE
T ss_pred HHHcCCEEEEeCchhhhhccCCCccc---CC---CcEEEEeCccccccCCCCCCCCeEEEEEcHH-HHHh-CC--CCeee
Confidence 9999999999999976543 111111 13 4999999999999885 6899998653 2221 11 11111
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... .|.+ ++ .++.. ++.+....+....+.+.+..+..++.+++++..++..+++
T Consensus 299 ~~g~-------~~~~-~~---------------~~~~~--~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~ 353 (474)
T 1wyu_B 299 RGEE-------GFYL-DF---------------DRPKS--IGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNA 353 (474)
T ss_dssp ECSS-------CEEE-EC---------------CCTTC--CCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC-------eeEe-cc---------------cCccc--CcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0000 00 00000 0000000111123455566676677889999999999999
Q ss_pred HHHHHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEEecCCCCCHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~~~~~~~~~edid~ 339 (367)
+++.+.|+++ |+++..++ .++.+.+.+.. .....++.++|.++|+... ...+. ...++|+++ ...++++|+++
T Consensus 354 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~~~-~~~~~~~~~~~lRis~-~~~~t~e~id~ 429 (474)
T 1wyu_B 354 RYLKELLKEK-GYRVPYDGPSMHEFVAQPPE-GFRALDLAKGLLELGFHPP-TVYFPLIVKEALMVEP-TETEAKETLEA 429 (474)
T ss_dssp HHHHHHHHHT-TCBCSSCSSCCSCEEEBCST-TCCHHHHHHHHHHTTCCCC-EESCSTTSTTCEEECC-CTTSCHHHHHH
T ss_pred HHHHHHHhhc-CcEecCCCCcceEEEEEcCC-CCCHHHHHHHHHHCCcccc-ccccccccCCEEEEEe-ecCCCHHHHHH
Confidence 9999999987 88874332 33323344421 2336789999998886532 11111 246899965 56778999999
Q ss_pred HHHHHHHHHHH
Q psy3048 340 AWNEISHQSSE 350 (367)
Q Consensus 340 li~~l~~~~~~ 350 (367)
++++|++++++
T Consensus 430 ~~~~L~~~~~~ 440 (474)
T 1wyu_B 430 FAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 99999998765
No 28
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=4.5e-23 Score=198.59 Aligned_cols=280 Identities=11% Similarity=0.019 Sum_probs=190.0
Q ss_pred ceEEEecCCcchh----HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s----~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++.+|.+ +...++..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 118 gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~l~~i 191 (420)
T 1t3i_A 118 GDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKT------KLVTVVHISNTLGCVNPAEEI 191 (420)
T ss_dssp TCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTE------EEEEEESBCTTTCBBCCHHHH
T ss_pred CCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCc------eEEEEeCCcccccCcCCHHHH
Confidence 4467778889998 566677789999999998889999999999997644 588899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
.++|++||+++++|++|+.+....+. .. .+ .|++++++|| +.+|.|+|+++.++ +........... ...
T Consensus 192 ~~l~~~~~~~li~D~a~~~~~~~~~~-~~--~~---~di~~~s~sK-~~~~~g~G~~~~~~-~~~~~~~~~~~~---~~~ 260 (420)
T 1t3i_A 192 AQLAHQAGAKVLVDACQSAPHYPLDV-QL--ID---CDWLVASGHK-MCAPTGIGFLYGKE-EILEAMPPFFGG---GEM 260 (420)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCH-HH--HT---CSEEEEEGGG-TTSCTTCEEEEECH-HHHHHSCCCSCS---TTS
T ss_pred HHHHHHcCCEEEEEhhhccCCccCch-hh--cC---CCEEEEehhh-hcCCCceEEEEEch-HHHhhcCceecC---CCc
Confidence 99999999999999999876543221 11 12 4999999999 55678889888853 333321111000 000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.. ...... ..| ...+ ..+..........+++.++++.+...+++++.++..++++++
T Consensus 261 ~~--~~~~~~--~~~----~~~~---------------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (420)
T 1t3i_A 261 IA--EVFFDH--FTT----GELP---------------HKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYL 317 (420)
T ss_dssp EE--EECSSC--EEE----CCTT---------------GGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cc--cccccc--cCC----CCch---------------hhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 00 000000 000 0000 001111111112233334566665567888999999999999
Q ss_pred HHHhcCCCCeEEeCCC-----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE--------ECC-eeEEEEEecCCC
Q psy3048 266 ADLVEKDDRFELVCPP-----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS--------FQG-RPFLRFVVTSPE 331 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--------~~~-~~~lRi~~~~~~ 331 (367)
.+.|++++|+++..++ ..+++.|.+++ ....++.+.|.++|+ .+.+.. ..+ ..++|+++ ..+
T Consensus 318 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~g~~~~iRis~-~~~ 393 (420)
T 1t3i_A 318 WQGLGQIPQLRLYGPNPKHGDRAALASFNVAG--LHASDVATMVDQDGI-AIRSGHHCTQPLHRLFDASGSARASL-YFY 393 (420)
T ss_dssp HHHHHTCTTEEEESCCGGGSCBCSEEEEEETT--BCHHHHHHHHHTTTE-ECBCSCTTCHHHHHHTTCCCCEEEEC-CTT
T ss_pred HHHHHhCCCeEEeCCCccccccCCEEEEEECC--CCHHHHHHHHHHCCe-EEeeccccchHHHHhcCCCCeEEEec-CCC
Confidence 9999999899988764 36778887753 235678888888884 443321 112 56899975 567
Q ss_pred CCHHHHHHHHHHHHHHHHHhhC
Q psy3048 332 TNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~~ 353 (367)
++++|+++++++|+++++++.+
T Consensus 394 ~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 394 NTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CCHHHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999887643
No 29
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.92 E-value=3.8e-23 Score=196.62 Aligned_cols=262 Identities=11% Similarity=0.041 Sum_probs=185.9
Q ss_pred ceEEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|.++..++.. .|++++.+++++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.
T Consensus 88 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i~ 161 (382)
T 4eb5_A 88 GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDT------ILVSVQHANNEIGTIQPVEEIS 161 (382)
T ss_dssp CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTE------EEEECCSBCTTTCBBCCHHHHH
T ss_pred CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCC------eEEEEeccCCCccccCCHHHHH
Confidence 34677888999999887764 69999999998889999999999987543 5888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|++||++ ++|++|+.+....+. .. . ..|+++.++||+ ++|.|+|++++++...+. .++.....
T Consensus 162 ~l~~~~~~~-i~D~a~~~g~~~~~~-~~--~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~-------~~~~~~~~ 226 (382)
T 4eb5_A 162 EVLAGKAAL-HIDATASVGQIEVDV-EK--I---GADMLTISSNDI-YGPKGVGALWIRKEAKLQ-------PVILGGGQ 226 (382)
T ss_dssp HHHTTSSEE-EEECTTTBTTBCCCH-HH--H---TCSEEEEETGGG-TCCSSCEEEEEETTCCCC-------CSSCSSCT
T ss_pred HHHHHCCCE-EEEcchhcCCcccCc-cc--c---CCCEEEeehHHh-cCCCceEEEEEccccccC-------ceecCCCc
Confidence 999999999 999999865433221 11 1 249999999998 557899999986542111 11111000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. ..+............+.++++.+ .++++++.++..++++++.
T Consensus 227 -----~-------------------------------~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~ 269 (382)
T 4eb5_A 227 -----E-------------------------------NGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRII 269 (382)
T ss_dssp -----G-------------------------------GGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -----c-------------------------------ccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 0 00000000101123444555543 3478889999999999999
Q ss_pred HHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--------------------CCeeEE
Q psy3048 267 DLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------------------QGRPFL 323 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------------~~~~~l 323 (367)
+.|++++|+++..++. .+.+.|++++ ....++.+.|.++|+. +.++.. .+..++
T Consensus 270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (382)
T 4eb5_A 270 DNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLDMAGIQ-ASTGSACSSKTLQPSHVLMACGLKHEEAHGTL 346 (382)
T ss_dssp HHHTTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHHHHTCB-CBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEE
T ss_pred HHHhhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHHHCCEE-EeccccccCCCCcccHHHHHcCCChhccCCeE
Confidence 9999998998876532 4577888763 2356788888888854 333211 013589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
|+++ ...++++|+++++++|+++++++.+
T Consensus 347 Ri~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 347 LLTL-GRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp EEEC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9975 5678899999999999999888764
No 30
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.92 E-value=1.8e-23 Score=199.80 Aligned_cols=278 Identities=12% Similarity=-0.002 Sum_probs=188.3
Q ss_pred eEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
-.|++++.+|++. ...++..|++++.++.++++.+|+++|++++++.. .+.+|++++++|++|.+.|+++|.++
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l 159 (392)
T 2z9v_A 84 DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHP----EITVVSVCHHDTPSGTINPIDAIGAL 159 (392)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEEGGGTEECCHHHHHHH
T ss_pred CEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCC----CCcEEEEeccCCCCceeccHHHHHHH
Confidence 4566677889875 33445579999999998888899999999996421 13578899999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC--c--cccccC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD--R--VYLKHT 184 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~--~--~yl~~~ 184 (367)
|++||+++++|++|+.+....+. .. . .+|++++++|||+++|.|+|+++++++ .+....... + .|....
T Consensus 160 ~~~~~~~li~D~a~~~g~~~~~~-~~--~---~~d~~~~s~sK~~~~~~g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~ 232 (392)
T 2z9v_A 160 VSAHGAYLIVDAVSSFGGMKTHP-ED--C---KADIYVTGPNKCLGAPPGLTMMGVSER-AWAKMKANPLAPRASMLSIV 232 (392)
T ss_dssp HHHTTCEEEEECTTTBTTBSCCG-GG--G---TCSEEEECSSSTTCCCSCCEEEEECHH-HHHHHHTCTTSCCSSTTCSG
T ss_pred HHHcCCeEEEEcccccCCccccc-cc--c---cceEEEecCcccccCCCceeEEEECHH-HHHHhhhccCCCCceeccHH
Confidence 99999999999999865443221 11 1 249999999999999999999998643 232221100 0 111000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ...+ .. ..............++.++++.+...|++++.++..+++++
T Consensus 233 ~~-----~~~~---------------------~~-----~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 281 (392)
T 2z9v_A 233 DW-----ENAW---------------------SR-----DKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKA 281 (392)
T ss_dssp GG-----TTTT---------------------ST-----TSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HH-----Hhhh---------------------cc-----cCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 00 0000 00 00000001111223455666666666788899999999999
Q ss_pred HHHHhcCCCCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH
Q psy3048 265 FADLVEKDDRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid 338 (367)
+.+.|+++ |+++..++ ..+++.|+++. .....++.+.|.++ |+ .+.+.. ..+..++|+++..++++++|++
T Consensus 282 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gi-~v~~g~~~~~~~~lRi~~~~~~~~~~~i~ 358 (392)
T 2z9v_A 282 MRAGVTAM-GLSVWAASDSIASPTTTAVRTPD-GVDEKALRQAARARYGV-VFSSGRGETLGKLTRIGHMGPTAQPIYAI 358 (392)
T ss_dssp HHHHHHHT-TCCBSSSSGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCE-ECEECCGGGTTTEEEEECCGGGCSHHHHH
T ss_pred HHHHHHHc-CCeeccCCccccCCceEEEECCC-CCCHHHHHHHHHhcCCE-EEecCCCCCCCCeEEEeCcccccCHHHHH
Confidence 99999987 88876533 35667787752 22356888899887 74 343322 1235689996433377899999
Q ss_pred HHHHHHHHHHHHhhC
Q psy3048 339 FAWNEISHQSSEMNL 353 (367)
Q Consensus 339 ~li~~l~~~~~~~~~ 353 (367)
+++++|+++++++..
T Consensus 359 ~~~~~l~~~~~~~~~ 373 (392)
T 2z9v_A 359 AALTALGGAMNAAGR 373 (392)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999887654
No 31
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=6.7e-24 Score=200.21 Aligned_cols=269 Identities=10% Similarity=0.000 Sum_probs=183.4
Q ss_pred EEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 32 VAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 32 ~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.+++....|++ +...++..|++++.++.++++.+|+++|+ +++.+ .+|++++++|++|.+.|+++|.++|
T Consensus 85 ~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~------~~v~~~~~~nptG~~~~l~~i~~la 156 (362)
T 3ffr_A 85 KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADA------EIICLTHNETSSGVSMPVEDINTFR 156 (362)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTC------CEEEEESEETTTTEECCHHHHTTSG
T ss_pred cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCc------cEEEEEcCCCCcceeCCHHHHHHHH
Confidence 44445566777 34456678999999999888999999998 43333 5888899999999999999999999
Q ss_pred hhc-CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 110 QEY-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~-gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
++| |+++++|++|+.+....+ ...+|++++++|||+++|+|+|+++.++. .+.+...... +.+..
T Consensus 157 ~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~~~~~-~~~~~~~~~~---gg~~~-- 222 (362)
T 3ffr_A 157 DKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGLGVWILNDR-VIEKSKALLA---KRKSI-- 222 (362)
T ss_dssp GGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCCEEEEEEHH-HHHHHHHHHH---TTCCC--
T ss_pred HhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCceEEEEECHH-HHHHhhhccc---cCCCC--
Confidence 999 999999999986654322 22269999999999998999999887643 2222211000 00000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
....++ ..+... .+.. ........+....+..+++.+..+|++++.++..++++++.+.
T Consensus 223 -~~~~~~--~~~~~~--------~~~~----------~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 281 (362)
T 3ffr_A 223 -GTYHTI--PSMLEK--------ARVN----------QTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTY 281 (362)
T ss_dssp -CSTTSH--HHHHHH--------HTTT----------CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -cccccH--HHHHHH--------hhcC----------CCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 000000 000000 0000 0000111122345556666666677899999999999999999
Q ss_pred hcCCCCeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 269 L~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
|+++||+++..++ ...+++|.+++ ...++.++|.++|+ .+.++ ...+..++|+++ +..++++|+++++++
T Consensus 282 L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi-~~~~g~~~~~~~~iRis~-~~~~~~e~i~~l~~~ 356 (362)
T 3ffr_A 282 IESSKVFSFGVEDAKLRSMTTIVANTTM---LPGEINKILEPFDM-AVGAGYGSKKETQIRIAN-FPAHSLEQVHKLVQT 356 (362)
T ss_dssp HHHCSSEEESSSCGGGBCSSEEEEEESS---CHHHHHHHHGGGTE-EEEECSGGGTTTEEEEEC-CTTSCHHHHHHHHHH
T ss_pred HHHccCceeccCChhhcCCceEEEecCC---CHHHHHHHHHHCCe-EEecCccccCCCEEEEEC-CCCCCHHHHHHHHHH
Confidence 9999999987632 34677787764 46789999999974 44432 222456899976 567899999999999
Q ss_pred HHHHH
Q psy3048 344 ISHQS 348 (367)
Q Consensus 344 l~~~~ 348 (367)
|+++.
T Consensus 357 l~~~~ 361 (362)
T 3ffr_A 357 LKEKI 361 (362)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98863
No 32
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=1.5e-22 Score=195.52 Aligned_cols=263 Identities=13% Similarity=0.147 Sum_probs=185.0
Q ss_pred ceEEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|++++.+|.++..++.. .|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.
T Consensus 113 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i~ 186 (423)
T 3lvm_A 113 GKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDT------ILVSIMHVNNEIGVVQDIAAIG 186 (423)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTE------EEEECCSBCTTTCBBCCHHHHH
T ss_pred CCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCc------EEEEEeCCCCCCccccCHHHHH
Confidence 45677888999999888744 59999999998889999999999997654 5888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++|++||+++++|++|+.+....+.. .. ..|++++++||+ .+|.|+|++++++.. .... ..+......
T Consensus 187 ~l~~~~~~~li~Dea~~~~~~~~~~~-----~~-~~di~~~s~sK~-~g~~g~G~~~~~~~~-~~~~----~~~~~~~~~ 254 (423)
T 3lvm_A 187 EMCRARGIIYHVDATQSVGKLPIDLS-----QL-KVDLMSFSGHKI-YGPKGIGALYVRRKP-RVRI----EAQMHGGGH 254 (423)
T ss_dssp HHHHHHTCEEEEECTTTTTTSCCCTT-----TS-CCSEEEEESTTT-TSCSSCEEEEECBTT-BCCC----CCSSCSSCT
T ss_pred HHHHHcCCEEEEEhhhhcCCCCcChh-----hc-CCCEEEechHHh-cCCCCeEEEEEeccc-cCCC----CccccCCcc
Confidence 99999999999999998765533211 11 359999999995 567789999986432 1110 111111000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. ..+...........++.+++..+. +.++++.++..++++++.
T Consensus 255 -----~-------------------------------~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~ 297 (423)
T 3lvm_A 255 -----E-------------------------------RGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLW 297 (423)
T ss_dssp -----T-------------------------------TTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred -----c-------------------------------ccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 0 000000011112233444555443 337888999999999999
Q ss_pred HHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-C-------------------CeeEE
Q psy3048 267 DLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-Q-------------------GRPFL 323 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~-------------------~~~~l 323 (367)
+.|++++|+++..++. .+.+.|.+.+ ....++.+.|.+ +.+.++.. . ...++
T Consensus 298 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 372 (423)
T 3lvm_A 298 NGIKDIEEVYLNGDLEHGAPNILNVSFNY--VEGESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSI 372 (423)
T ss_dssp HHHTTSTTEEEESCSTTBCTTEEEEEETT--SCHHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEE
T ss_pred HHHhcCCCEEEeCCccccCCCeEEEEeCC--CCHHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceE
Confidence 9999999999887543 3577787754 235677777765 33322211 0 03689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
|+++ ...++++|+++++++|+++++++.+
T Consensus 373 Ri~~-~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 373 RFSL-GRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEC-CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEC-CCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 9976 5778899999999999999988764
No 33
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.91 E-value=3.1e-23 Score=198.31 Aligned_cols=273 Identities=15% Similarity=0.057 Sum_probs=187.8
Q ss_pred ceEEEecCCcchh--HHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s--~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+-.|++++.+|.+ +...++..|++++.++.+.++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~l~~i~ 182 (393)
T 1vjo_A 109 GDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRP------AILALVHAETSTGARQPLEGVG 182 (393)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCC------SEEEEESEETTTTEECCCTTHH
T ss_pred CCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCc------eEEEEeccCCCcceeccHHHHH
Confidence 3466777789998 8888888999999999988889999999999987 44 4788899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC---Ccccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT---DRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~---~~~yl~~ 183 (367)
++|++||+++++|++|+.+..+.+ +.. ..+|+++.++||++++|.|+|+++++++ ........ ..++...
T Consensus 183 ~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~ 255 (393)
T 1vjo_A 183 ELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSR-AIEKLQRRRTKVANWYLD 255 (393)
T ss_dssp HHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHH-HHHHHHTCSSCCSCSTTC
T ss_pred HHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECHH-HHHHHhccCCCCCceecC
Confidence 999999999999999985433221 111 1359999999999999999999998653 23221110 0011000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. .|... +... ..+...........++..+++.+..++++++.++..++++
T Consensus 256 ~--------------~~~~~-------~~~~---------~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 305 (393)
T 1vjo_A 256 M--------------NLLGK-------YWGS---------ERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVE 305 (393)
T ss_dssp H--------------HHHHH-------HHST---------TCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred c--------------Hhhhh-------hhcc---------CCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 0 00000 0000 0000001111233455566666556678899999999999
Q ss_pred HHHHHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|+++ |+++..++. .+++.|+++. .....++.+.|.++ |+ .+.++. ..+..++|+++....+++++++
T Consensus 306 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~iRis~~~~~~~~~~i~ 382 (393)
T 1vjo_A 306 YLWERLEDI-GLSLHVEKEYRLPTLTTVCIPD-GVDGKAVARRLLNEHNI-EVGGGLGELAGKVWRVGLMGFNSRKESVD 382 (393)
T ss_dssp HHHHHHHHT-TCCBSSCGGGBCSSEEEEECCT-TCCHHHHHHHHHHHHCE-ECEECCGGGTTTEEEEECCGGGCSHHHHH
T ss_pred HHHHHHHHc-CCcccCCccccCCcEEEEEcCC-CCCHHHHHHHHHhhCCE-EEecCccccCCCEEEEeCCccCChHHHHH
Confidence 999999988 887765432 3567777643 22356888999888 74 443332 2235689997444456788899
Q ss_pred HHHHHHHHHH
Q psy3048 339 FAWNEISHQS 348 (367)
Q Consensus 339 ~li~~l~~~~ 348 (367)
+++++|++++
T Consensus 383 ~~~~~l~~~l 392 (393)
T 1vjo_A 383 QLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 34
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=5.7e-23 Score=196.59 Aligned_cols=281 Identities=12% Similarity=0.059 Sum_probs=187.7
Q ss_pred eEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 31 LVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
-.|++++.+|.+.. ..++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.+
T Consensus 94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~i~~ 167 (396)
T 2ch1_A 94 DRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQP------KCLFLTHGDSSSGLLQPLEGVGQ 167 (396)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCC------SEEEEESEETTTTEECCCTTHHH
T ss_pred CeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCC------CEEEEECCCCCCceecCHHHHHH
Confidence 35666778898874 46778899999999988889999999999987 34 47888999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC---CccccccC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT---DRVYLKHT 184 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~---~~~yl~~~ 184 (367)
+|++||+++++|++|+.+....+ +... .+|+++.++||++++|.|+|++++++ ..+...... ..++....
T Consensus 168 l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (396)
T 2ch1_A 168 ICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPISISP-KALDVIRNRRTKSKVFYWDL 240 (396)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCH
T ss_pred HHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEEEECH-HHHHhhhhccCcccceEech
Confidence 99999999999999985533221 1111 25999999999999999999988865 333322111 01111100
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. .|... +... .. ..+...........++.++++.+..++++++.++..+++++
T Consensus 241 ~-------------~~~~~--------~~~~--~~----~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 293 (396)
T 2ch1_A 241 L-------------LLGNY--------WGCY--DE----PKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQI 293 (396)
T ss_dssp H-------------HHHHH--------TTCS--SS----CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred H-------------HHHHh--------hhhh--cc----cCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 0 00000 0000 00 00000011112224455566665567788999999999999
Q ss_pred HHHHhcCCCCeEEeCCCC---c-eeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPS---M-GLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~---~-~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid 338 (367)
+.+.|+++ |++++.++. . .++.|+++. .....++.++|.++ |+. +.++. .....++|++++...++++|++
T Consensus 294 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~e~i~ 370 (396)
T 2ch1_A 294 LYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPK-GVDWWKVSQYAMNNFSLE-VQGGLGPTFGKAWRVGIMGECSTVQKIQ 370 (396)
T ss_dssp HHHHHHHH-TCCBSSCSGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCBC-CBCCCGGGTTTEEEEECCGGGCSHHHHH
T ss_pred HHHHHHHC-CCeeccCCccccCCceEEEEcCC-CCCHHHHHHHHHHhCCEE-EecCccccCCCEEEEECCCCcCCHHHHH
Confidence 99999988 887765432 1 367777752 22356888888876 743 33221 1234689997633456899999
Q ss_pred HHHHHHHHHHHHhhCC
Q psy3048 339 FAWNEISHQSSEMNLP 354 (367)
Q Consensus 339 ~li~~l~~~~~~~~~~ 354 (367)
+++++|+++++++...
T Consensus 371 ~~~~~l~~~l~~~~~~ 386 (396)
T 2ch1_A 371 FYLYGFKESLKATHPD 386 (396)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999887544
No 35
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=9.3e-23 Score=194.43 Aligned_cols=276 Identities=14% Similarity=0.132 Sum_probs=186.4
Q ss_pred CceEEEecCCcchhHHHH----HHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCCh
Q psy3048 29 SRLVAYASDQSNSSVEKS----AIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
++-.|++++.+|.+...+ ++..|++++.++.+ +++.+|+++|++++++.+ .+|++++++|++|.+.|+
T Consensus 100 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~ 173 (390)
T 1elu_A 100 QGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKT------RLVILSHLLWNTGQVLPL 173 (390)
T ss_dssp TTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTE------EEEEEESBCTTTCCBCCH
T ss_pred CCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCc------eEEEEeccccCCceecCH
Confidence 345677788999996654 46679999999986 578899999999987544 588899999999999999
Q ss_pred hhHHHHHh----hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCc
Q psy3048 103 EELGPICQ----EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 103 ~~I~~l~~----~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
++|.++|+ +||+++++|++|+.+....+. .. ...|+++.++|||+++|.|+|+++++++ ..........
T Consensus 174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~-----~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~ 246 (390)
T 1elu_A 174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDF-----SR-LEVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYV 246 (390)
T ss_dssp HHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCT-----TT-SCCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSC
T ss_pred HHHHHHHhhhhhhcCcEEEEEcccccCCcCCCh-----hh-cCCCEEEccccccccCCCceEEEEECHH-hHhhcCCccc
Confidence 99999999 999999999999865433211 11 1359999999999999999999998643 2322111000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRK 257 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~ 257 (367)
.+...... .....| .+. . .. ..+...........++.++++.+...+ ++++.++
T Consensus 247 g~~~~~~~---~~~~~~---------------~~~--~--~~---~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~ 301 (390)
T 1elu_A 247 GWRSITYG---AKGEPT---------------GWA--E--GG---KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQA 301 (390)
T ss_dssp CTTTEEEC---TTSCEE---------------EEC--S--GG---GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCccccc---ccCccc---------------ccc--c--ch---HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 00000000 000000 000 0 00 001100111122244455666655555 8889999
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCC--CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 258 HISLAKKFADLVEKDDRFELVCP--PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
..++++++.+.|++++|++++.| +..+++.|+++. +....++.++|.++|+ .+.+.. ++.++|+++ +..++++
T Consensus 302 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~~~--~~~~iRis~-~~~~~~~ 376 (390)
T 1elu_A 302 ICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDS-PLGHRAIVQKLEEQRI-YLRTIA--DPDCIRACC-HYITDEE 376 (390)
T ss_dssp HHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECS-SSCHHHHHHHHHHTTE-ECEEET--TTTEEEEEC-CTTCCHH
T ss_pred HHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCC-CCCHHHHHHHHHHCCE-EEEecC--CCCeEEEec-ccCCCHH
Confidence 99999999999999889998764 356778888753 2235688899988874 443332 446899975 5678899
Q ss_pred HHHHHHHHHHHH
Q psy3048 336 DVAFAWNEISHQ 347 (367)
Q Consensus 336 did~li~~l~~~ 347 (367)
|+++++++|+++
T Consensus 377 ~i~~~~~~l~~~ 388 (390)
T 1elu_A 377 EINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhh
Confidence 999999998754
No 36
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=4e-22 Score=189.48 Aligned_cols=262 Identities=14% Similarity=0.153 Sum_probs=181.4
Q ss_pred ceEEEecCCcchhHHHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.-.|++++.+|.++...+ +..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.
T Consensus 89 gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~~~i~ 162 (384)
T 1eg5_A 89 KRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDT------FLVSIMAANNEVGTIQPVEDVT 162 (384)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTE------EEEEEESBCTTTCBBCCHHHHH
T ss_pred CCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCC------eEEEEECCCCCcccccCHHHHH
Confidence 346777889999987766 5689999999998889999999999987644 5788899999999999999999
Q ss_pred HHHhhcC--cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYN--IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~g--i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|++|| +++++|++|+.+....+ +... ..|++++++||++ +|+|+|++++++...+. + .+...
T Consensus 163 ~l~~~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~~-g~~G~G~~~~~~~~~~~------~-~~~~~ 228 (384)
T 1eg5_A 163 RIVKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKFH-GPKGVGITYIRKGVPIR------P-LIHGG 228 (384)
T ss_dssp HHHHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGGT-SCTTCEEEEECTTSCCC------C-SBCSS
T ss_pred HHHHhcCCceEEEEEhhhhcCCcccC-----chhc-CCCEEEecHHHhc-CCCceEEEEEcCCCccc------c-ccccC
Confidence 9999999 99999999974433211 1111 3599999999984 57789998886531011 1 11110
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ...+ ............+..+++.. .+++++..++..+++++
T Consensus 229 ~~-----~~~~-------------------------------~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~ 271 (384)
T 1eg5_A 229 GQ-----ERGL-------------------------------RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSK 271 (384)
T ss_dssp CT-----TTTT-------------------------------BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHH
T ss_pred cc-----cccc-------------------------------cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 00 0000 00001111223344455542 35678889999999999
Q ss_pred HHHHhcCCCCeEEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-EC-------------------Cee
Q psy3048 265 FADLVEKDDRFELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQ-------------------GRP 321 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~-------------------~~~ 321 (367)
+.+.|++ +|+++..++ ....+.|.+++. ...++.+.|.++|+ .+.++. +. +..
T Consensus 272 l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi-~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 347 (384)
T 1eg5_A 272 LVSGLMN-LGAHIITPLEISLPNTLSVSFPNI--RGSTLQNLLSGYGI-YVSTSSACTSKDERLRHVLDAMGVDRRIAQG 347 (384)
T ss_dssp HHHHHHT-TTCEECSCTTSBCTTEEEEECTTC--CHHHHHHHHHHTTE-ECBC------------CHHHHTTCCHHHHHH
T ss_pred HHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC--CHHHHHHHHhhCCe-EEeccccccCCCCcchHHHHHcCCChhhcCC
Confidence 9999998 689887653 235677777532 25678888888874 333321 11 136
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
++|+++ ..+++++|+++++++|+++++++..
T Consensus 348 ~iRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 348 AIRISL-CKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp EEEEEC-CTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred eEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 899975 5678999999999999999887643
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=5.2e-23 Score=193.46 Aligned_cols=268 Identities=14% Similarity=0.006 Sum_probs=183.0
Q ss_pred ceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 30 RLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.-.|++++.+|++.. ..++..|++++.++.++++.+|+++|++ +. +.+|++++++|++|.+.|+++|.+
T Consensus 75 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~------~~~v~~~~~~nptG~~~~l~~i~~ 145 (352)
T 1iug_A 75 GERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---EG------YAGLLLVHSETSTGALADLPALAR 145 (352)
T ss_dssp TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SS------CSEEEEESEETTTTEECCHHHHHH
T ss_pred CCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cC------CcEEEEEEecCCcceecCHHHHHH
Confidence 346777788999965 4445589999999998888899999887 22 347888999999999999999999
Q ss_pred HHhhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|++| |+++++|++|+.+....+. .. . .+|++++++|||+++|.|+|+++++++ .+... .. ..+.
T Consensus 146 l~~~~~~~~~li~D~a~~~~~~~~~~-~~--~---~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~-~~-~~~~---- 212 (352)
T 1iug_A 146 AFKEKNPEGLVGADMVTSLLVGEVAL-EA--M---GVDAAASGSQKGLMCPPGLGFVALSPR-ALERL-KP-RGYY---- 212 (352)
T ss_dssp HHHHHCTTCEEEEECTTTBTTBCCCS-GG--G---TCSEEEEESSSTTCCCSCEEEEEECHH-HHHTC-CC-CSST----
T ss_pred HHHhhCCCCEEEEECCccccCcceec-cc--c---CeeEEEecCcccccCCCceeEEEECHH-HHHHh-hC-CCce----
Confidence 99999 9999999999865443221 10 1 259999999999999999999998543 23221 10 0000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
.++ ..+... ......++ ........++.++++.+... ++++.++..++++++
T Consensus 213 -------~~~--~~~~~~--------~~~~~~~~----------~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l 264 (352)
T 1iug_A 213 -------LDL--ARELKA--------QKEGESAW----------TPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALL 264 (352)
T ss_dssp -------TCH--HHHHHH--------HTTTCCSS----------CCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHH
T ss_pred -------eeH--HHHHhh--------cccCCCCC----------CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 000 000000 00000000 00111123444556554444 788889999999999
Q ss_pred HHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.+.|+++ |+++..++ ..+++.|+++. .....++.++|.++|+ .+.+... .+..++|+++ ...++++|+++++++
T Consensus 265 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~ 340 (352)
T 1iug_A 265 YGVGEEG-GLRPVPKRFSPAVAAFYLPE-GVPYARVKEAFAQRGA-VIAGGQGPLKGKVFRLSL-MGAYDRYEALGVAGM 340 (352)
T ss_dssp HHHHHHT-TCEESCSSBCTTCEEEECCT-TCCHHHHHHHHHTTTE-ECEECCGGGTTTEEEECC-CSSCCHHHHHHHHHH
T ss_pred HHHHHHC-CCcccccccCCeEEEEEcCC-CCCHHHHHHHHHHCCE-EEEeCCCccCCCEEEEEc-cccCCHHHHHHHHHH
Confidence 9999988 88887654 55678888763 2235689999998884 4443321 1346899965 567789999999999
Q ss_pred HHHHHHHh
Q psy3048 344 ISHQSSEM 351 (367)
Q Consensus 344 l~~~~~~~ 351 (367)
|+++++++
T Consensus 341 l~~~~~~~ 348 (352)
T 1iug_A 341 FREVLEEI 348 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998876
No 38
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=1e-22 Score=193.77 Aligned_cols=276 Identities=13% Similarity=0.058 Sum_probs=182.4
Q ss_pred ceEEEe-cCCcchhHHHHHHhCCcceEEEec-CCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 30 RLVAYA-SDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 30 ~~~v~~-s~~~H~s~~~~~~~~g~~v~~v~~-~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
+.+++. +...|.++...++..|++++.++. ++++.+|+++|++++++ .+ .+|++++++|++|.+.|+++|.
T Consensus 87 d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~l~~i~ 160 (385)
T 2bkw_A 87 KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSY------GAVTVTHVDTSTAVLSDLKAIS 160 (385)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCC------SEEEEESEETTTTEECCHHHHH
T ss_pred CeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCC------CEEEEEccCCCcCeEcCHHHHH
Confidence 444454 333445555677788999999999 78899999999999986 33 4788899999999999999999
Q ss_pred HHHhhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhh-hhcc----CCcc
Q psy3048 107 PICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT-NTFF----TDRV 179 (367)
Q Consensus 107 ~l~~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~----~~~~ 179 (367)
++|++| |+++++|++|+.+....+ +... .+|++++++|||+++|+|+|+++++++ .+. .... ....
T Consensus 161 ~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~~~~~~~-~~~~~l~~~~~~~~~~ 233 (385)
T 2bkw_A 161 QAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSISLCSSR-FMDYALNDSKNGHVHG 233 (385)
T ss_dssp HHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEEEEECHH-HHHHHTCHHHHCCCSC
T ss_pred HHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceEEEEcHH-HHHHHHhhccCCCCCc
Confidence 999999 999999999986544322 1111 359999999999999999999988653 232 1100 0001
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
|... . ..|... + ..+..+. .............++.++++.+...+++++.++..
T Consensus 234 ~~~~-----------~--~~~~~~----~-~~~~~~~--------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 287 (385)
T 2bkw_A 234 YFSS-----------L--RRWTPI----M-ENYEAGK--------GAYFATPPVQLINSLDVALKEILEEGLHKRWDLHR 287 (385)
T ss_dssp STTC-----------H--HHHHHH----H-HHHHTTC--------CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eeec-----------H--HHHhhH----H-HhhhccC--------CCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 1000 0 000000 0 0000000 00000011112244455666655567888899999
Q ss_pred HHHHHHHHHh-cCCCCeEEeCCC-----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE--CCeeEEEEE-ec-C
Q psy3048 260 SLAKKFADLV-EKDDRFELVCPP-----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--QGRPFLRFV-VT-S 329 (367)
Q Consensus 260 ~la~~l~~~L-~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~~~~~lRi~-~~-~ 329 (367)
++++++.+.| +++ |+++..++ ..+++.|++++ ..++.++|.++|+ .+.+... .+..++|++ +. +
T Consensus 288 ~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi-~v~~g~~~~~~~~~iRis~~~~~ 361 (385)
T 2bkw_A 288 EMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLKSHGV-VIAGGIHKDIGPKYIRIGHMGVT 361 (385)
T ss_dssp HHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC----HHHHHHHHHHTTE-ECBCCCCTTTGGGEEEECCCGGG
T ss_pred HHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC----HHHHHHHHHHCCe-EEeCCCCcccCCCEEEEEccccc
Confidence 9999999999 988 88887532 35677887753 5688888888874 4433322 135689997 42 2
Q ss_pred -CCCCHHHHHHHHHHHHHHHHH
Q psy3048 330 -PETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 330 -~~~~~edid~li~~l~~~~~~ 350 (367)
..++++|+++++++|++++++
T Consensus 362 ~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 362 ACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TSSTTCTHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHHHHHHHh
Confidence 246899999999999988654
No 39
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=8.6e-24 Score=200.93 Aligned_cols=259 Identities=11% Similarity=-0.029 Sum_probs=178.9
Q ss_pred EEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 33 AYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 33 v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
|++..++|++. .+.++..|..++.++.+.++..++++++.+++++++ +|++++.+|.+|++.|+ +|+
T Consensus 106 v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~------lV~~~h~et~tG~~~pi-----i~~ 174 (377)
T 3e77_A 106 ADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDAS------YVYYCANETVHGVEFDF-----IPD 174 (377)
T ss_dssp EEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCS------CEEEESEETTTTEECSS-----CCC
T ss_pred EEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCcc------EEEEeCccCchheEchh-----hhc
Confidence 34445667764 334455688887778776677788888776666553 78899999999999999 588
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNT 190 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 190 (367)
++|++++||++++.+..+.+.. ..|++++++|||+ +|+|+|+++++++. +.+.....+.|+.
T Consensus 175 ~~~~~~~vD~~q~~g~~~id~~--------~~~~~~~s~~K~~-gp~G~g~l~~~~~~-l~~~~~~~p~~~~-------- 236 (377)
T 3e77_A 175 VKGAVLVCDMSSNFLSKPVDVS--------KFGVIFAGAQKNV-GSAGVTVVIVRDDL-LGFALRECPSVLE-------- 236 (377)
T ss_dssp CTTCCEEEECTTTTTSSCCCGG--------GCSEEEEEGGGTT-SCTTCEEEEEETTS-CSCCCTTSCGGGC--------
T ss_pred cCCCEEEEEcccccCCCCCchh--------hcCEEEEeccccc-CCCccEEEEEcHHH-HhhccCCCCchhh--------
Confidence 9999999999999988776532 2267899999999 69999999997643 2221111112210
Q ss_pred CCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHh
Q psy3048 191 QSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L 269 (367)
|... .+....++| .+-+..+++.++++.+..+ |++++.++..++++++++.|
T Consensus 237 ---------~~~~--------~~~~~~~~T----------p~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L 289 (377)
T 3e77_A 237 ---------YKVQ--------AGNSSLYNT----------PPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEII 289 (377)
T ss_dssp ---------HHHH--------HTTTTCSSC----------CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------HHHH--------hhcCCCCCC----------chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 1000 000001111 1112346677888888788 89999999999999999999
Q ss_pred cCCCCeEEeC-CC--Cce-eEEEEEcCC---chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 270 EKDDRFELVC-PP--SMG-LVCFRLKGD---NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 270 ~~~~g~~~~~-~~--~~~-~v~f~~~~~---~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++++|+.+.. ++ .++ +++|.+++. ......+.+.+.++|+. +.++ +...+.+|+|+ ..++|++|||++++
T Consensus 290 ~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~-~~~g-~~~~g~iRiS~-~~~~t~edId~l~~ 366 (377)
T 3e77_A 290 DNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNML-SLKG-HRSVGGIRASL-YNAVTIEDVQKLAA 366 (377)
T ss_dssp HTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEE-SCBC-CTTTCSEEEEC-CTTSCHHHHHHHHH
T ss_pred HhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcE-EeCC-CCcCCEEEEEC-CCCCCHHHHHHHHH
Confidence 9999998643 22 344 589998752 22335677777778743 3222 22234699976 68999999999999
Q ss_pred HHHHHHHH
Q psy3048 343 EISHQSSE 350 (367)
Q Consensus 343 ~l~~~~~~ 350 (367)
+|+++.++
T Consensus 367 al~~~~~~ 374 (377)
T 3e77_A 367 FMKKFLEM 374 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 40
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.90 E-value=1.2e-22 Score=193.03 Aligned_cols=271 Identities=15% Similarity=0.130 Sum_probs=180.5
Q ss_pred ceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 30 RLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+.+|+ ++..+++.. ..+...|++++.++.+.++.+|+++|++++++++ .+|++++++|++|.+.|+++|.+
T Consensus 96 d~vi~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~------~~v~~~~~~nptG~~~~l~~i~~ 168 (376)
T 3f0h_A 96 DKVLV-IDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNF------TGLLVNVDETSTAVLYDTMMIGE 168 (376)
T ss_dssp CCEEE-EESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCC------CEEEEESEETTTTEECCHHHHHH
T ss_pred CeEEE-EeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCc------eEEEEecccCCcceecCHHHHHH
Confidence 44444 444455532 3466679999999998889999999998775544 47888989999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~ 186 (367)
+|++||+++++|++|+.+....+... .+ +|++++++||++++|+|+|+++.+++ ........ ...+..
T Consensus 169 l~~~~~~~li~D~~~~~~~~~~~~~~---~~---~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~---- 237 (376)
T 3f0h_A 169 FCKKNNMFFVCDCVSAFLADPFNMNE---CG---ADVMITGSQKVLACPPGISVIVLAPR-GVERVEKSKVRTMYF---- 237 (376)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCHHH---HT---CSEEEEETTTTTCCCSSCEEEEECHH-HHHHHHTCCCCCSTT----
T ss_pred HHHHcCCEEEEEcCccccCccccccc---cC---ccEEEecCcccccCCCceEEEEECHH-HHHHhhcCCCCceee----
Confidence 99999999999999987665432111 13 39999999999998999999887543 33222111 111100
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l 265 (367)
++ ..|.... ...+ ..++ .......++.+++..+... +++++.++..++++++
T Consensus 238 -------~~--~~~~~~~-----------~~~~----~~~~---~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l 290 (376)
T 3f0h_A 238 -------DL--KDALKNQ-----------ERGQ----TPFT---PAVGILLQINERLKEIKKHGGADAEVARIASQAADF 290 (376)
T ss_dssp -------CH--HHHHHHH-----------TTTC----CSSC---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred -------cH--HHHHhhc-----------ccCC----CCCC---CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 00 0000000 0000 0000 0001124455667666666 7899999999999999
Q ss_pred HHHhcCCCCeEEeCCCCc-eeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSM-GLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~-~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.+.|+++ ++++..++.. .++.+... .....++.++|.++ |+ .+.++. ..+..++|+++ ...++++|++++++
T Consensus 291 ~~~L~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~gi-~v~~g~~~~~~~~lRis~-~~~~t~e~i~~~~~ 365 (376)
T 3f0h_A 291 RAKIKDL-PFELVSESPANGVTSVHPT--TANAYDIFLKLKDEYGI-WICPNGGEMKDTIFRVGH-IGALTHEDNTTLVN 365 (376)
T ss_dssp HHHTTTS-SEEECCSSBBTTEEEEEES--SSCHHHHHHHHHHHSSE-ECEECCGGGTTTCEEEEC-CSSCCHHHHHHHHH
T ss_pred HHHHHHc-CCccCccccCceEEEEeCC--CCCHHHHHHHHHHhCCE-EEecCccccCCCEEEEec-CCCCCHHHHHHHHH
Confidence 9999997 7877654433 34444432 23367899999988 74 444331 12346899965 56789999999999
Q ss_pred HHHHHHHH
Q psy3048 343 EISHQSSE 350 (367)
Q Consensus 343 ~l~~~~~~ 350 (367)
+|++++++
T Consensus 366 ~l~~~l~~ 373 (376)
T 3f0h_A 366 AFKDLQKR 373 (376)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998763
No 41
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=2.6e-22 Score=192.72 Aligned_cols=261 Identities=10% Similarity=0.045 Sum_probs=178.2
Q ss_pred ceEEEecCCcchhHHHHHHh----CCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAII----GDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
.-.|++++.+|.+...++.. .|++++.++.+ +++.+|+++|++++++.+ .+|++++++|++|.+.|+++
T Consensus 113 gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~l~~ 186 (406)
T 3cai_A 113 GYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKST------RLVAVNSASGTLGGVTDLRA 186 (406)
T ss_dssp TCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTE------EEEEEESBCTTTCBBCCCHH
T ss_pred CCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCc------eEEEEeCCcCCccccCCHHH
Confidence 34677788999987665543 69999999987 678999999999986544 58889999999999999999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce-eEEEecchhhhhhccCCcccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS-AMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g-~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
|.++|++||+++++|++|+.+....+... .+ .|++++++||+++ |. +| ++++++ .......... .+...
T Consensus 187 i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~---~d~~~~s~~K~~g-~~-~G~~~~~~~-~~~~~l~~~~-~~~~~ 256 (406)
T 3cai_A 187 MTKLVHDVGALVVVDHSAAAPYRLLDIRE---TD---ADVVTVNAHAWGG-PP-IGAMVFRDP-SVMNSFGSVS-TNPYA 256 (406)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTCCCCHHH---HC---CSEEEEEGGGGTS-CS-CEEEEESCH-HHHHTSCCCC-SCTTC
T ss_pred HHHHHHHcCCEEEEEcccccCCCCCCchh---cC---CCEEEeehhhhcC-CC-cCeEEEEeh-HHHhhcCCcc-cCCCC
Confidence 99999999999999999986654333111 13 4999999999864 64 77 777754 3332211110 00000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH--------------
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-------------- 249 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------- 249 (367)
. . + ..+...........++.++++.+...
T Consensus 257 ~-~---------------------~---------------~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 299 (406)
T 3cai_A 257 T-G---------------------P---------------ARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAV 299 (406)
T ss_dssp C-G---------------------G---------------GGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHH
T ss_pred C-c---------------------c---------------ccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhh
Confidence 0 0 0 00000000101112334445443322
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC--CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-------E---
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCPP--SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-------F--- 317 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-------~--- 317 (367)
+++++.++..++++++.+.|++++|+++..++ ..+++.|++++ ....++.+.|.++|+ .+.+.. .
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~~~gi-~v~~g~~~~~~~~~g~~ 376 (406)
T 3cai_A 300 SMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHK--VPADRVVQRLADNGI-LAIANTGSRVLDVLGVN 376 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETT--BCHHHHHHHHHHTTE-ECEECCSCHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECC--cCHHHHHHHHHHCCc-EEecCChHHHHHHcCCC
Confidence 47888889999999999999999899887653 35678888764 235678888888874 444332 0
Q ss_pred CCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 318 QGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 318 ~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.+..++|+++ ..+++++|+++++++|+++
T Consensus 377 ~~~~~iRis~-~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 377 DVGGAVTVGL-AHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp TTTCCEEEEC-CTTCCHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEe-ecCCCHHHHHHHHHHHHHh
Confidence 1236899976 5778899999999999753
No 42
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=6e-23 Score=196.70 Aligned_cols=263 Identities=13% Similarity=0.080 Sum_probs=163.3
Q ss_pred EEEecCCcchhHHHHHHh---CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~---~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.|++++.+|.++...+.. .|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.++
T Consensus 111 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i~~l 184 (400)
T 3vax_A 111 HIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDT------LLVSLMHVNNETGVIQPVAELAQQ 184 (400)
T ss_dssp EEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTE------EEEECCSBCTTTCBBCCHHHHHHH
T ss_pred EEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCc------eEEEEECCCCCceeeCcHHHHHHH
Confidence 778888999998777654 59999999998889999999999987654 589999999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEE-EecchhhhhhccCCccccccCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMW-VKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~-~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
|++||+++++|++|+.+....+ .... +|+++.++|| +++|.|+|+++ ++++.......... .++.....
T Consensus 185 a~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~- 254 (400)
T 3vax_A 185 LRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHK-IGAPKGVGALVTRRREEMDDERVPLE-PIMFGGGQ- 254 (400)
T ss_dssp HTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGG-GTSCSSCEEEEECBCSSSTTCBCCCC-CSSCSSCT-
T ss_pred HHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHH-hCCCCceEEEEEecchhccccccccC-ceecCCCc-
Confidence 9999999999999986544322 1222 5999999999 55688999999 87632221000001 11110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
. ..+...........++.++++.+ .++++++.++..++++++.+
T Consensus 255 ------~-----------------------------~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~ 298 (400)
T 3vax_A 255 ------E-----------------------------RKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLA 298 (400)
T ss_dssp ------G-----------------------------GGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHH
T ss_pred ------e-----------------------------eeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 0 00000000111123333444433 45788999999999999999
Q ss_pred HhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEE-----EEEeEEC--------C------eeEEEE
Q psy3048 268 LVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIY-----IIKASFQ--------G------RPFLRF 325 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~-----~~~~~~~--------~------~~~lRi 325 (367)
.|+ .+|+++..++. .+.+.|.+++. ...++.+.|. +|+.. +...... + ..++|+
T Consensus 299 ~L~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl 374 (400)
T 3vax_A 299 GLA-STSFQVNGDQDHVVPHILNLSFEDV--DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRF 374 (400)
T ss_dssp HHT-TTTCEECSCTTSBCTTEEEEECTTC--CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEE
T ss_pred hhC-CCCEEEeCCcccCCCCEEEEEeCCC--CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEE
Confidence 999 88999876543 35777877642 3567777777 66321 1111100 0 369999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 326 VVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 326 ~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+++...++++|+++++++|++++++
T Consensus 375 s~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 375 SWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEC--------------------
T ss_pred EccCCCCCHHHHHHHHHHHHHHhcc
Confidence 7624667899999999999988653
No 43
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.89 E-value=2.5e-22 Score=190.27 Aligned_cols=263 Identities=13% Similarity=0.135 Sum_probs=183.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEe--cCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLR--SDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~--~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
+-.|++++.+|.+...+++..|++++.++ .++++.+|+++|++++++...+ ..+.+|++++++|++|.+.|+++|.+
T Consensus 93 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~ 171 (371)
T 2e7j_A 93 DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAK 171 (371)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHH
Confidence 45677889999999999999999999999 7777999999999999854211 12468999999999999999999999
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhh-hccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTN-TFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~-~~~~~~~yl~~~~~ 186 (367)
+|++||+++++|++|+.+....+... .+ +|+++.++||++++|.++|+++.+++ .... .......+....
T Consensus 172 ~~~~~~~~li~D~a~~~~~~~~~~~~---~~---~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~-- 242 (371)
T 2e7j_A 172 VCSEYDVPLLVNGAYAIGRMPVSLKE---IG---ADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEKYKNKEV-- 242 (371)
T ss_dssp HHHTTTCCEEEECTTTBTTBCCCHHH---HT---CSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSSCTTSBG--
T ss_pred HHHHcCCeEEEECccccCCCCCChhh---cC---CCEEEecCCcCCCCCCCcEEEEEech-hhhhhccccccCccccc--
Confidence 99999999999999988765322111 12 48999999999999999999998653 2221 111000000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH--HHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH--ISLAKK 264 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~la~~ 264 (367)
.+ .++ + .......++.++++.+.. ++.++. .+++++
T Consensus 243 -------~~---------------------~~~-------~---~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~ 280 (371)
T 2e7j_A 243 -------EL---------------------LGC-------T---ARGATIITLMASFPHVRE----RIKRWDEEVEKARR 280 (371)
T ss_dssp -------GG---------------------TTC-------C---CCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHH
T ss_pred -------cc---------------------ccC-------C---cCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 00 000 0 000112233344444322 556677 889999
Q ss_pred HHHHhcCCCCeEEeCCC--CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-C---C--eeEEE-EEecCCC-CCH
Q psy3048 265 FADLVEKDDRFELVCPP--SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-Q---G--RPFLR-FVVTSPE-TNQ 334 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~---~--~~~lR-i~~~~~~-~~~ 334 (367)
+.+.|+++ |+++..++ ..++++++++ ...++.+.|.+.|+. +.+... . + +.++| +++. .+ +++
T Consensus 281 l~~~L~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~-~~~~~~~~~~~g~~~~~iRii~~~-~~~~~~ 353 (371)
T 2e7j_A 281 FAAEMEKL-GIKQLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFF-LYRELKSRKIHGIKPGLTRYFKLS-TYGLSD 353 (371)
T ss_dssp HHHHHHHT-TCEEESSSSCCSSEEEEECH----HHHHHHHHSSSGGGH-HHHHHHHTTEECSCTTCCSEEEEE-CTTCCH
T ss_pred HHHHHHHc-CcEEecCCCccCceEEEECC----CHHHHHHHHHHCCEE-EEeccccccccCCCCCceEEEEee-ccCCCH
Confidence 99999988 89887654 4667777764 356788888877753 322110 0 1 46899 9764 44 789
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3048 335 CDVAFAWNEISHQSSEM 351 (367)
Q Consensus 335 edid~li~~l~~~~~~~ 351 (367)
+|+++++++|+++++++
T Consensus 354 ~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 354 EEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998753
No 44
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.89 E-value=1.6e-21 Score=186.51 Aligned_cols=265 Identities=14% Similarity=0.068 Sum_probs=186.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++..|.++..+++..|++++.++. +|+++|++++++...++..+.+|++++++|++|.+.|+++|.++|
T Consensus 127 gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 201 (399)
T 3tqx_A 127 EDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLA 201 (399)
T ss_dssp TCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHH
T ss_pred CCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 457778899999999999999999998886 478899999988654433467999999999999999999999999
Q ss_pred hhcCcEEEEecccccccccCh-hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLP-EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~-~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+... .......++ ...|+++.+.||++++++| |+++.++ +...........|.....
T Consensus 202 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~~~~~~~~~~~~~~~~-- 277 (399)
T 3tqx_A 202 DKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EIIEWLRNRSRPYLFSNT-- 277 (399)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHHHHHHHHCHHHHSSCC--
T ss_pred HHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHHHHHHHhCcceeccCC--
Confidence 999999999999975433211 000111121 3459999999999996666 7777643 333322111112211100
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
........+..+++... ++.++..++..++++++.+
T Consensus 278 -------------------------------------------~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~ 313 (399)
T 3tqx_A 278 -------------------------------------------VAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRA 313 (399)
T ss_dssp -------------------------------------------CCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------CcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHH
Confidence 00011123334444332 5678888999999999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ |+++. ++..+.+.+.++. .....++.++|.++|+. +.+.. ..+..++|+++ ...++++|+++++++
T Consensus 314 ~L~~~-g~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~ 388 (399)
T 3tqx_A 314 GMEKL-GFQLV-PGNHPIIPVMLGD-AQLATNMADHLLQEGIY-VVGFSYPVVPMGKARIRVQM-SAVHTQQQLDRAIEA 388 (399)
T ss_dssp HHHHH-TCCBC-CCSSSEEEEEEEC-HHHHHHHHHHHHHTTEE-CCEECTTTSCTTCEEEEEEC-CTTCCHHHHHHHHHH
T ss_pred HHHHc-CCCcC-CCCCCEEEEEeCC-HHHHHHHHHHHHHCCCE-EeeeCCCCCCCCCceEEEEe-ecCCCHHHHHHHHHH
Confidence 99887 77765 5566777777764 34567899999998844 43332 23457999976 457889999999999
Q ss_pred HHHHHHHhh
Q psy3048 344 ISHQSSEMN 352 (367)
Q Consensus 344 l~~~~~~~~ 352 (367)
|+++++++.
T Consensus 389 l~~~~~~~~ 397 (399)
T 3tqx_A 389 FGQVGKKLG 397 (399)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 999988753
No 45
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=9.9e-22 Score=189.29 Aligned_cols=270 Identities=17% Similarity=0.127 Sum_probs=180.9
Q ss_pred ceEEEecCCcchhHHHHHH----hC--CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSSVEKSAI----IG--DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~----~~--g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
+.+|+++...|.+...++. .. |++++.++. +++|++++++.+ .+|++++++|++|.+.|++
T Consensus 119 d~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~ 185 (416)
T 1qz9_A 119 RRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQDT------AVVMLTHVNYKTGYMHDMQ 185 (416)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTTE------EEEEEESBCTTTCBBCCHH
T ss_pred CcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCCc------eEEEEeccccCcccccCHH
Confidence 5578888889998766543 23 889888875 678888886543 5889999999999999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc-eeEEEecchhhhhhccCCccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC-SAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
+|.++|++||+++++|++|+.+....+. .. .+ +|++++++||++++++|+ |+++++++ ..........+|..
T Consensus 186 ~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~--~~---~d~~~~s~~K~l~~g~~~~g~l~~~~~-~~~~l~~~~~g~~g 258 (416)
T 1qz9_A 186 ALTALSHECGALAIWDLAHSAGAVPVDL-HQ--AG---ADYAIGCTYKYLNGGPGSQAFVWVSPQ-LCDLVPQPLSGWFG 258 (416)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSCCCH-HH--HT---CSEEEECSSSTTCCCTTCCCEEEECTT-TTTTSCCSCCCGGG
T ss_pred HHHHHHHHcCCEEEEEccccccCcCCCh-hh--cC---CCEEEecCcccCCCCCCCeEEEEECHH-HHhccCCCccccCc
Confidence 9999999999999999999865443321 11 12 499999999999888888 99998653 22211111111111
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... ......| .+ ..+. ..+...........++.++++.+..++++++.++..+++
T Consensus 259 ~~~~--~~~~~~~---------------~~----~~~~---~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 314 (416)
T 1qz9_A 259 HSRQ--FAMEPRY---------------EP----SNGI---ARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALT 314 (416)
T ss_dssp BCTT--SCCCSSC---------------CB----CSSG---GGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cccc--cCCCCcc---------------CC----Ccch---HHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1000 0000001 00 0000 001111111122344556676665578899999999999
Q ss_pred HHHHHHhcCC-C--CeEEeCCC----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHH
Q psy3048 263 KKFADLVEKD-D--RFELVCPP----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 263 ~~l~~~L~~~-~--g~~~~~~~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
+++.+.|+++ + |+++..++ ..++++++++. ..++.+.|.++|+ .+. ..+..++|+++.+.+++++
T Consensus 315 ~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~gi-~~~---~~~~~~lRis~~~~~~t~~ 386 (416)
T 1qz9_A 315 DLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALIDRGV-IGD---YREPRIMRFGFTPLYTTFT 386 (416)
T ss_dssp HHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHHTTTE-ECE---EETTTEEEEECCTTTCCHH
T ss_pred HHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHHhCCc-Eec---cCCCCeEEEeCcccCCCHH
Confidence 9999999885 6 88887653 35677777653 5688889998884 332 2345689997643578999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy3048 336 DVAFAWNEISHQSSEM 351 (367)
Q Consensus 336 did~li~~l~~~~~~~ 351 (367)
|+++++++|++++++.
T Consensus 387 ~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 387 EVWDAVQILGEILDRK 402 (416)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 46
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=1.2e-21 Score=186.96 Aligned_cols=275 Identities=10% Similarity=0.032 Sum_probs=177.9
Q ss_pred EEEecCCcchhH--HHHHHhCC--cceEEEecCCC---------CCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCccc
Q psy3048 32 VAYASDQSNSSV--EKSAIIGD--VPVRQLRSDDN---------GVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 32 ~v~~s~~~H~s~--~~~~~~~g--~~v~~v~~~~~---------~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G 97 (367)
.|++++.+|++. ...+...| .+++.++.+.. +.+|+++|++++++ .+ .+|++++++|++|
T Consensus 76 ~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~~~~G 149 (379)
T 3ke3_A 76 DCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKS------AIVYAPHVETSSG 149 (379)
T ss_dssp EEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTC------SEEEEESEETTTT
T ss_pred eEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCC------cEEEEEeecCCCc
Confidence 455556777764 23344455 47777876431 36899999999964 34 3788899999999
Q ss_pred ccCC---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhc
Q psy3048 98 AFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTF 174 (367)
Q Consensus 98 ~i~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 174 (367)
.+.| +++|+++||+||+++++|++|+ +..+.+... .+ +|++++++|||+++|+|+|+++++++ ......
T Consensus 150 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~---~~---~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~ 221 (379)
T 3ke3_A 150 IILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKE---LG---IDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVE 221 (379)
T ss_dssp EECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHH---HT---CSEEEECTTTTTCSCCCEEEEEECHH-HHHHHH
T ss_pred eeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccc---cC---CCEEEecchhhcCCCCceEEEEECHH-HHHhhh
Confidence 9999 9999999999999999999998 544333211 13 49999999999999999999998653 232221
Q ss_pred c-CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHH
Q psy3048 175 F-TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQA 253 (367)
Q Consensus 175 ~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 253 (367)
. ...+|.. + +..|... ++. ++.+. +.+.. ..+.....++.++++.+..+|+++
T Consensus 222 ~~~~~~~~~-----------~--~~~~~~~----~~~-~~~g~-------~~~~~-t~~~~~~~a~~aal~~~~~~g~~~ 275 (379)
T 3ke3_A 222 STESNCFSL-----------D--LKQWLTI----MRA-YENGG-------HAYHA-TMPTDSLRQFRDAILEAKEIGFDI 275 (379)
T ss_dssp TCCCSCSTT-----------C--HHHHHHH----HHH-HHTTS-------CCCSS-CCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred cCCCCceee-----------c--HHHHHHH----HHh-hhccC-------CCCCC-CCCHHHHHHHHHHHHHHHHhcHHH
Confidence 1 1111111 0 0011000 000 00000 00100 011122345667777777788999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeCCC--CceeE-EEEEcCCchHHHHHHHHHhccCcEEEEEeEE------CCeeEEE
Q psy3048 254 YLRKHISLAKKFADLVEKDDRFELVCPP--SMGLV-CFRLKGDNDLTNQLYERLMSHKQIYIIKASF------QGRPFLR 324 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~~g~~~~~~~--~~~~v-~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~------~~~~~lR 324 (367)
+.++..++++++++.|+++ |++++.++ .++.+ .+...+ . .....+.|.++|+. +.++.. .+...+|
T Consensus 276 ~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-~--~~~~~~~L~~~Gi~-v~~g~~~~~~~~~~~~~lR 350 (379)
T 3ke3_A 276 LRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-D--DMHKGSAFAEAGLQ-IAAGVPLKVGEPDNFKTFR 350 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-H--HHHSSHHHHHTTCC-CEECCCCSSCCCTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-c--chHHHHHHHHCCeE-EeCCccccccccCcCCEEE
Confidence 9999999999999999998 88876544 24434 333322 1 12235677778854 443321 1256899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+++ +.++|++||++++++|+++++++.
T Consensus 351 is~-~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 351 LGL-FGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp EEC-CSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EeC-CcCCCHHHHHHHHHHHHHHHHHhc
Confidence 975 567899999999999999988765
No 47
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=5.9e-22 Score=187.53 Aligned_cols=255 Identities=12% Similarity=-0.015 Sum_probs=172.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCC--cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGV--LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~--~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+|+++..+|.. ...++..|++++.+++++++. ++++. + +++++ .+|.+++.+|.+|.+.|. |+
T Consensus 97 ~i~~~~~~~~~-~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t------~lv~~~~~e~~tG~~~~~-----i~ 161 (361)
T 3m5u_A 97 YANTGVWTKKA-IKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNA------DYAYICSNNTIYGTQYQN-----YP 161 (361)
T ss_dssp EEECSHHHHHH-HHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTS------SEEEEESEETTTTEECSS-----CC
T ss_pred EEeCCHHHHHH-HHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCC------CEEEEeCCCCCcceeCCc-----cc
Confidence 46665556643 344455799999999987764 56666 3 66655 378889999999998662 44
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhcc-CCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFF-TDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~ 188 (367)
+. |++++||++++.+..+.+. +.+|++++++|||+ +|+|+|+++++++. +.+... ..+.++.....
T Consensus 162 ~~-~~~~~vD~~q~~g~~~id~--------~~~d~~~~s~~K~~-gp~G~g~l~~~~~~-~~~~~~~~~p~~~~~~~~-- 228 (361)
T 3m5u_A 162 KT-KTPLIVDASSDFFSRKVDF--------SNIALFYGGVQKNA-GISGLSCIFIRKDM-LERSKNKQIPSMLNYLTH-- 228 (361)
T ss_dssp CC-SSCEEEECGGGTTSSCCCC--------TTEEEEEEETTTTS-SCTTCEEEEEEHHH-HHHHHTCCCCGGGCHHHH--
T ss_pred cc-CCEEEEEcccccCCCCCCc--------ccCCEEEEechhcc-CCCccEEEEEcHHH-HhhhcCCCCCceeehHHH--
Confidence 44 9999999999988776542 23599999999999 59999999997643 322211 11222110000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~ 267 (367)
.+....++| .+-...+++.++++.+..+ |++++.++..++++++++
T Consensus 229 -----------------------~~~~~~~~T----------p~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~ 275 (361)
T 3m5u_A 229 -----------------------AENQSLFNT----------PPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYE 275 (361)
T ss_dssp -----------------------HHTTTCSSC----------CCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------hhcCCCCCC----------ccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 000011111 1112346777888888778 899999999999999999
Q ss_pred HhcCCCCe-EEeCCC--C-ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRF-ELVCPP--S-MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~-~~~~~~--~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
+|++++|+ .+..++ . .++++|.+++......++.+.|.++|+ .+..+ +...+.+|+|+ +.++|++|||+++++
T Consensus 276 ~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~gI-~~~~g-~~~~g~iRiS~-~~~~t~edId~l~~a 352 (361)
T 3m5u_A 276 CIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGM-IGLKG-HRILGGIRASI-YNALNLDQVKTLCEF 352 (361)
T ss_dssp HHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTTE-ECCBC-CTTTCSEEEEC-CTTSCHHHHHHHHHH
T ss_pred HHHHCCCeeeccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCCC-EEecC-CCccCeEEEEc-cCCCCHHHHHHHHHH
Confidence 99999776 554432 2 358899987511223567788888874 33222 12224699975 688999999999999
Q ss_pred HHHHHHH
Q psy3048 344 ISHQSSE 350 (367)
Q Consensus 344 l~~~~~~ 350 (367)
|+++.++
T Consensus 353 l~~~~~~ 359 (361)
T 3m5u_A 353 MKEFQGK 359 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999775
No 48
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.88 E-value=2.5e-21 Score=188.33 Aligned_cols=274 Identities=13% Similarity=0.051 Sum_probs=175.4
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++.+|.+...++ +..|++++.+++ +++.+|+++ +++++ .+|+++++ |++|.+.|+++|
T Consensus 150 gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~~t------~~v~i~~p-n~tG~~~~l~~i 217 (438)
T 1wyu_A 150 RMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGEEV------GAVVVQNP-NFLGALEDLGPF 217 (438)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCTTE------EEEEEESS-CTTSBCCCHHHH
T ss_pred CCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCCCe------EEEEEECC-CCCeEEecHHHH
Confidence 446778899999987665 448999999997 567888776 43333 58888998 999999999999
Q ss_pred HHHHhhcCcEEEEecc-cccccccChhhhhhhCCCCCcceeeecccc-----ccccCCcceeEEEecchhhhhhccCCcc
Q psy3048 106 GPICQEYNIWLHVDAA-YAGSALLLPEYAHLKRGLEYVDSFAFNAHK-----WLLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a-~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK-----~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+++||++|+++++|.. ++.+.+..+ .. .+ +|++++++|| |+++| |+|++++++. .... + +.
T Consensus 218 ~~la~~~g~~vivd~d~~a~g~~~~~-~~---~g---~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~~-l---~~ 284 (438)
T 1wyu_A 218 AEAAHGAGALFVAVADPLSLGVLKPP-GA---YG---ADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVRQ-L---PG 284 (438)
T ss_dssp HHHHHHTTCEEEEECCTTGGGTBCCH-HH---HT---CSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGGG-C---CS
T ss_pred HHHHHHcCCEEEEEechhhccCcCCC-cc---CC---CCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHHh-C---CC
Confidence 9999999999997754 443333322 11 12 4999999888 77888 9999998653 2322 1 11
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHH--HHHhhHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMT--LRSYGLKGLQAYLRK 257 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~g~~~~~~~ 257 (367)
++....... .....|.+. . . ....+.... ... ..+ ++. ....++.++ +..++.+|++++.++
T Consensus 285 ~~~g~~~~~-~~~~~~~~~-l-~-~~~~~~r~~-~~t-------~~~---~~~-~~~~a~~aa~~l~~~~~~g~~~~~~~ 348 (438)
T 1wyu_A 285 RLVSETVDV-EGRRGFILT-L-Q-AREQYIRRA-KAK-------SNI---TTN-AQLTALMGAMYLAALGPEGLREVALK 348 (438)
T ss_dssp CCEEEEEBT-TSCEEEEEC-C-G-GGSHHHHGG-GSS-------CCC---CSC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecccccc-CCCcceeee-c-c-ccccccchh-ccc-------CCc---cch-HHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 111100000 000011000 0 0 000000000 000 000 000 011233333 677788899999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEE-EEEeEECCeeEEEEEecCCCCCHH
Q psy3048 258 HISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIY-IIKASFQGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~lRi~~~~~~~~~e 335 (367)
..++++++.++|++++|+++..+ +.+..+.|+.. ....++.++|.++|+.. +.+..+.+..++|+++ ..+++++
T Consensus 349 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~-~~~~t~e 424 (438)
T 1wyu_A 349 SVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP---KDPEAVRRALAERGFHGATPVPREYGENLALFAA-TELHEEE 424 (438)
T ss_dssp HHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS---SCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEEC-CTTCCHH
T ss_pred HHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC---CCHHHHHHHHHHCCceeccccccccCCCeEEEEe-cccCCHH
Confidence 99999999999999999998875 34555666653 22578999999888543 1222223357999976 5788999
Q ss_pred HHHHHHHHHHHHH
Q psy3048 336 DVAFAWNEISHQS 348 (367)
Q Consensus 336 did~li~~l~~~~ 348 (367)
|+++++++|++++
T Consensus 425 di~~~~~~l~~~l 437 (438)
T 1wyu_A 425 DLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998763
No 49
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=1.6e-20 Score=182.07 Aligned_cols=264 Identities=12% Similarity=0.045 Sum_probs=183.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|+++...|.++..+++..|++++.++. +|+++|++++++... ..+.+|+++.++|++|.+.|+++|.++|
T Consensus 148 gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~ 220 (427)
T 2w8t_A 148 GEYVILDADSHASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVA 220 (427)
T ss_dssp TCEEEEETTCCHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHH
T ss_pred CCEEEECCcccHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHH
Confidence 346777899999999999999999988874 599999999976321 1246888899999999999999999999
Q ss_pred hhcCcEEEEecccccccccC-hhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLL-PEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+.. ........++ ..+|+++.+.||+++ ++| |+++.++ +..........+|.....
T Consensus 221 ~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~g-G~v~~~~-~l~~~l~~~~~~~~~~~~-- 295 (427)
T 2w8t_A 221 KKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVG-GFVVSNH-PKFEAVRLACRPYIFTAS-- 295 (427)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCC-EEEEECC-TTGGGGGGTCHHHHSSCC--
T ss_pred HHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCC-CEEEeCH-HHHHHHHHhcccccccCC--
Confidence 99999999999998866531 0000111122 246999999999997 556 7777743 333222111112211100
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
........+.++++.+. .++++.++..++++++.+
T Consensus 296 -------------------------------------------~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~ 330 (427)
T 2w8t_A 296 -------------------------------------------LPPSVVATATTSIRKLM--TAHEKRERLWSNARALHG 330 (427)
T ss_dssp -------------------------------------------CCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHH
Confidence 00011223334454432 246778889999999999
Q ss_pred HhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 268 ~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.|+++ |+++..++ ..+++.+.+++ .....++.++|.++|+ ++.+... .+..++|+++ ...++++|++++++
T Consensus 331 ~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi-~v~~~~~~~~~~~~~~lRi~~-~~~~t~e~i~~~~~ 406 (427)
T 2w8t_A 331 GLKAM-GFRLGTETCDSAIVAVMLED-QEQAAMMWQALLDGGL-YVNMARPPATPAGTFLLRCSI-CAEHTPAQIQTVLG 406 (427)
T ss_dssp HHHHH-TCEESCSSCCSSEEEEEESS-HHHHHHHHHHHHHTTE-ECEEECTTTSCTTCEEEEEEC-CTTCCHHHHHHHHH
T ss_pred HHHHc-CCcccCCCCCCCEEEEEECC-HHHHHHHHHHHHHCCe-EEeeeCCCCCCCCCeEEEEEe-CCCCCHHHHHHHHH
Confidence 99887 88877455 66778888754 3456789999999984 4444322 2346999976 56678999999999
Q ss_pred HHHHHHHHhhCC
Q psy3048 343 EISHQSSEMNLP 354 (367)
Q Consensus 343 ~l~~~~~~~~~~ 354 (367)
+|+++++++...
T Consensus 407 ~l~~~l~~~~~~ 418 (427)
T 2w8t_A 407 MFQAAGRAVGVI 418 (427)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCcc
Confidence 999998876544
No 50
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.87 E-value=2.7e-22 Score=191.55 Aligned_cols=251 Identities=12% Similarity=-0.009 Sum_probs=170.9
Q ss_pred Ccchh--HHHHHHhCCcceEEEecC--CCCC-cCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CChhhHHHHHhh
Q psy3048 38 QSNSS--VEKSAIIGDVPVRQLRSD--DNGV-LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNLEELGPICQE 111 (367)
Q Consensus 38 ~~H~s--~~~~~~~~g~~v~~v~~~--~~~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl~~I~~l~~~ 111 (367)
++|++ +...++..| +++.++++ ++|. +++++++++++++++ +|++++.+|.+|++ +|+++|+
T Consensus 123 ~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~------lV~~~h~et~tG~~i~pi~~i~----- 190 (386)
T 3qm2_A 123 AGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAA------YLHYCPNETIDGIAIDETPDFG----- 190 (386)
T ss_dssp SSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCS------CEEECSEETTTTEECCCCCCCC-----
T ss_pred CCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCc------EEEEECCcCCcCEecCchhhhc-----
Confidence 34444 333445568 89999987 4564 888888888877664 78899999999995 9999996
Q ss_pred cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCC
Q psy3048 112 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQ 191 (367)
Q Consensus 112 ~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 191 (367)
+|++++||++|+.+.++.+.. ..|++++++|||+ +|+|+|+++++++. +++.....+.++.
T Consensus 191 ~g~~~~vDa~qs~g~~pidv~--------~~~~~~~s~hK~l-GP~G~g~l~v~~~~-~~~~~~~~p~~~~--------- 251 (386)
T 3qm2_A 191 PEVVVTADFSSTILSAPLDVS--------RYGVIYAGAQKNI-GPAGLTLVIVREDL-LGKAHESCPSILD--------- 251 (386)
T ss_dssp TTCCEEEECTTTTTSSCCCGG--------GCSEEEEETTTTT-CCTTEEEEEEEGGG-CSCCCTTSCGGGC---------
T ss_pred CCCEEEEEcccccCCCCCCcc--------ccCEEEEeccccc-CCCccEEEEECHHH-HhhhcccCCcHHH---------
Confidence 799999999999988776532 2267889999999 59999999997643 2221111111110
Q ss_pred CCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhc
Q psy3048 192 SPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVE 270 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~~L~ 270 (367)
| .. ..+...+++| .+-...+++.++++.+..+ |++++.++..++++++++.|+
T Consensus 252 ---~-----~~--------~~~~~~~~gT----------p~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~ 305 (386)
T 3qm2_A 252 ---Y-----TV--------LNDNDSMFNT----------PPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVID 305 (386)
T ss_dssp ---H-----HH--------HHHC-----------------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---H-----HH--------HhhcCCCCCC----------CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0000011111 1112346777888888787 899999999999999999999
Q ss_pred CCCCeE-EeCCC--C-ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 271 KDDRFE-LVCPP--S-MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 271 ~~~g~~-~~~~~--~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
++ ++. ...++ . .++++|.+++ .....++...|.++|+. +..+ ....+.+|+|+ ..++|++|||+++++|++
T Consensus 306 ~~-~~~~~~~~~~~rs~~iv~f~~~~-~~~~~~~~~~L~~~gI~-~~~g-~~~~~~iRiS~-~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 306 NS-DFYRNDVAQANRSRMNVPFQLAD-NTLDKVFLEESFAAGLH-ALKG-HRVVGGMRASI-YNAMPIEGVKALTDFMID 380 (386)
T ss_dssp TC-SSEECCBCGGGBCSSEEEEEESS-GGGHHHHHHHHHHTTEE-CCBC-CTTTCSEEEEC-CTTSCHHHHHHHHHHHHH
T ss_pred HC-CCcccCCCHHHcCceEEEEECCC-ccccHHHHHHHHHCCCE-EeCC-CCCcCeEEEEc-CCCCCHHHHHHHHHHHHH
Confidence 98 653 22222 3 3588999875 23336777778888843 2211 12123599975 788999999999999999
Q ss_pred HHHH
Q psy3048 347 QSSE 350 (367)
Q Consensus 347 ~~~~ 350 (367)
+.++
T Consensus 381 ~~~~ 384 (386)
T 3qm2_A 381 FERR 384 (386)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9775
No 51
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.87 E-value=1.9e-20 Score=179.50 Aligned_cols=262 Identities=12% Similarity=0.042 Sum_probs=179.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++...|.++..+++..|++++.++. +|+++|++++++..+.+..+.+|++++++|++|.+.|+++|.++|+
T Consensus 130 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~ 204 (401)
T 1fc4_A 130 DAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLAD 204 (401)
T ss_dssp CEEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHH
T ss_pred CEEEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHH
Confidence 46777889999999999999999988874 4899999999864332223568888999999999999999999999
Q ss_pred hcCcEEEEecccccccc-c-ChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 EYNIWLHVDAAYAGSAL-L-LPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~-~-~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+||+++++|++|+.+.. . ..... ...++ ...|+++.+.||+++++.| |+++.+ ++..........++....
T Consensus 205 ~~~~~li~De~~~~g~~~~~g~~~~-~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~~~--- 278 (401)
T 1fc4_A 205 KYDALVMVDDSHAVGFVGENGRGSH-EYCDVMGRVDIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLFSN--- 278 (401)
T ss_dssp HTTEEEEEECTTTTTTSSTTSCCHH-HHTTCTTCCSEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHHSC---
T ss_pred HcCCEEEEECcccccccCCCCCccH-HHcCCCcCCcEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCceeCC---
Confidence 99999999999974433 1 11111 11122 2359999999999976766 887774 333332211111111000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
. ........+..+++.+.. .++..++..++++++.+
T Consensus 279 ----~--------------------------------------~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~ 314 (401)
T 1fc4_A 279 ----S--------------------------------------LAPAIVAASIKVLEMVEA--GSELRDRLWANARQFRE 314 (401)
T ss_dssp ----C--------------------------------------CCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHH
T ss_pred ----C--------------------------------------CCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence 0 000112233334443321 46777888999999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ |+++. ++..+.+.++++. .....++.+.|.++|+ .+.+... .+..++|+++ ...++++|+++++++
T Consensus 315 ~L~~~-g~~~~-~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~ 389 (401)
T 1fc4_A 315 QMSAA-GFTLA-GADHAIIPVMLGD-AVVAQKFARELQKEGI-YVTGFFYPVVPKGQARIRTQM-SAAHTPEQITRAVEA 389 (401)
T ss_dssp HHHHT-TCCBC-CSSSSEEEEEEEC-HHHHHHHHHHHHHTTE-ECCEECTTSSCTTCEEEEEEC-CTTCCHHHHHHHHHH
T ss_pred HHHHc-CCccc-CCCCCEEEEEcCC-hHHHHHHHHHHHHCCc-EEeeecCCCCCCCCceEEEEe-CCCCCHHHHHHHHHH
Confidence 99987 77765 5566777787753 3346688899998884 4433322 1346899965 567789999999999
Q ss_pred HHHHHHHhh
Q psy3048 344 ISHQSSEMN 352 (367)
Q Consensus 344 l~~~~~~~~ 352 (367)
|+++++++.
T Consensus 390 l~~~~~~~~ 398 (401)
T 1fc4_A 390 FTRIGKQLG 398 (401)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 999988753
No 52
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.87 E-value=3e-21 Score=184.12 Aligned_cols=265 Identities=7% Similarity=-0.042 Sum_probs=181.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCccccc---CCh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGTCAF---DNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~G~i---~dl 102 (367)
.-.|+++..+|.++..+++..|++++.++.+ .++.+|+++|+++++ +.+ .+|++++++|++|.+ +++
T Consensus 109 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~------~~v~i~~p~nptG~~~~~~~l 182 (391)
T 3dzz_A 109 GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSV------RMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTE------EEEEEESSBTTTTBCCCHHHH
T ss_pred CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCc------eEEEEECCCCCCCcccCHHHH
Confidence 4467788999999999999999999999884 235599999999997 333 578889999999999 889
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhh-CCCCCcc--eeeeccccccc-cCCcceeEEEecchhhhhhccCCc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLK-RGLEYVD--SFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~-~~~~~~D--~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
++|+++|++||+++++|++|+.+.+......... .+....| +++.+.||+++ .+.++|+++.++++..........
T Consensus 183 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 262 (391)
T 3dzz_A 183 KRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFF 262 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999986554321111000 0111145 88999999996 446788888864443332110000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
.+... ....+....+..++.. +.+.+++..++.
T Consensus 263 ~~~~~----------------------------------------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~ 295 (391)
T 3dzz_A 263 LAGIG----------------------------------------------EPNLLAIPAAIAAYEE-GHDWLRELKQVL 295 (391)
T ss_dssp HHTCS----------------------------------------------SCCTTHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred hhccC----------------------------------------------CCCHHHHHHHHHHHhc-cHHHHHHHHHHH
Confidence 00000 0000112333344443 455678888899
Q ss_pred HHHHHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-E--CCeeEEEEEecCCCCC
Q psy3048 259 ISLAKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-F--QGRPFLRFVVTSPETN 333 (367)
Q Consensus 259 ~~la~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~ 333 (367)
.++++++.+.|++ +||+++..+.....+++.++.......++.++|. ++|+ .+.++. + .++.++|+++. ++
T Consensus 296 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRis~~---~~ 371 (391)
T 3dzz_A 296 RDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGL-IISAGNGYRGNGHEFVRINLA---CP 371 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCE-ECEESGGGCTTGGGEEEEECC---SC
T ss_pred HHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEec---CC
Confidence 9999999999998 8999887554444445666531123668888886 6774 444432 2 23579999764 58
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy3048 334 QCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~ 351 (367)
++|++++++.|+++++++
T Consensus 372 ~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 372 KELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 53
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.87 E-value=6e-21 Score=196.79 Aligned_cols=271 Identities=17% Similarity=0.103 Sum_probs=186.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCC-----CCc-----CHHHHHHHHHHH--hh--CCCccEEEEEecCCCc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-----GVL-----RGDALLTAVKED--LA--KGLIPCCLVATLGTTG 95 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-----~~~-----d~~~L~~~l~~~--~~--~~~~~~~vv~~~~~t~ 95 (367)
.-.|++++.+|.|+..++...|+++++++++.+ +.+ |+++|++++++. ++ ++..|.+++++++ |+
T Consensus 245 GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~ 323 (755)
T 2vyc_A 245 NDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TY 323 (755)
T ss_dssp TCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CT
T ss_pred CCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CC
Confidence 446778899999999999999999999987532 346 999999999863 32 4455667888886 78
Q ss_pred ccccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC--cce------eeeccccccccCCcceeEEEecc
Q psy3048 96 TCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY--VDS------FAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 96 ~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~--~D~------~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
+|.+.|+++|+++|++||+++++|+||+++..+.+.++.. ..+.. +|+ ++.++||++.+|.++|++++++.
T Consensus 324 ~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~-~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 324 DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp TSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTS-SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred CceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCCc-chhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 9999999999999999999999999998754443322100 11112 476 99999999999999999998765
Q ss_pred h-hhh-hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH
Q psy3048 168 N-HLT-NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS 245 (367)
Q Consensus 168 ~-~~~-~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (367)
. .+. ..+. .++.... ..++++ ....++.++++.
T Consensus 403 ~~~i~~~~~~---~~~~~~~----s~sp~~--------------------------------------~~iaal~aA~~~ 437 (755)
T 2vyc_A 403 RGAINFSRFN---QAYMMHA----TTSPLY--------------------------------------AICASNDVAVSM 437 (755)
T ss_dssp BTCCCHHHHH---HHHHHTS----CSSCCH--------------------------------------HHHHHHHHHHHH
T ss_pred ccccCHHHHH---HHHHHhC----CCCHHH--------------------------------------HHHHHHHHHHHH
Confidence 1 110 0000 0000000 011122 122455566666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCC---------eEEeCCCC----------------------------------
Q psy3048 246 YGLKGLQAYLRKHISLAKKFADLVEKDDR---------FELVCPPS---------------------------------- 282 (367)
Q Consensus 246 ~~~~g~~~~~~~~~~la~~l~~~L~~~~g---------~~~~~~~~---------------------------------- 282 (367)
+..+|.++++++..+++++++++|++++| ++++.++.
T Consensus 438 l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (755)
T 2vyc_A 438 MDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES 517 (755)
T ss_dssp HSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCT
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccc
Confidence 66665677889999999999999998877 77765431
Q ss_pred ---------------ceeEEEEEcCCc---------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHH
Q psy3048 283 ---------------MGLVCFRLKGDN---------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 283 ---------------~~~v~f~~~~~~---------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid 338 (367)
...++|.+++.+ ..+.++.+.|.+.|+ ++.. .+...+|++ .++.+|++|++
T Consensus 518 ~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI-~~e~---~~~~~v~~~-~~~g~t~~~~~ 592 (755)
T 2vyc_A 518 WHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGI-VPTR---TTDFQIMFL-FSMGVTRGKWG 592 (755)
T ss_dssp TTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTC-CCSE---ECSSEEEEE-CCTTCCTTTTH
T ss_pred cccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCC-EEee---cCCCeEEEE-ECCCCCHHHHH
Confidence 135567665311 123578888877763 3322 245678884 57888999999
Q ss_pred HHHHHHHHHHHHhh
Q psy3048 339 FAWNEISHQSSEMN 352 (367)
Q Consensus 339 ~li~~l~~~~~~~~ 352 (367)
+++++|+++.+...
T Consensus 593 ~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 593 TLVNTLCSFKRHYD 606 (755)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999977653
No 54
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=3.2e-21 Score=182.97 Aligned_cols=271 Identities=13% Similarity=0.063 Sum_probs=177.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.+|.+...++...|++++.++.++++.+|+++|++++++.+ .+|+++++ +|.+.|+++|.++|
T Consensus 74 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~---tG~~~~l~~i~~l~ 144 (375)
T 2fnu_A 74 RNEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERT------KAIVSVDY---AGKSVEVESVQKLC 144 (375)
T ss_dssp SCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTE------EEEEEECG---GGCCCCHHHHHHHH
T ss_pred CCEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCc------eEEEEeCC---cCCccCHHHHHHHH
Confidence 3467888999999999999999999999998777899999999886544 35666654 89999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEec-chhhhhhccCCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKN-ANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~-~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
++||+++++|++|+.+...... .+.....++++++++||++ +| |.|++++.+ ++....... +...+...
T Consensus 145 ~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~~~~~~----~~~~~~~~- 214 (375)
T 2fnu_A 145 KKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELHEKMKL----FRSHGMLK- 214 (375)
T ss_dssp HHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHHHHHHH----HTBTTEEE-
T ss_pred HHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHHHHHHH----HHhcCCcc-
Confidence 9999999999999876543221 0111223567788888998 45 899988853 433322110 00000000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
.....| +... .+..+....+.+++.....++++++.++..++++++.+.
T Consensus 215 -~~~~~~-----------------~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (375)
T 2fnu_A 215 -KDFFEG-----------------EVKS-------------IGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRI 263 (375)
T ss_dssp -SSSSCE-----------------EESS-------------CCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred -cccccc-----------------cccc-------------ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0000 000001112233333334567888999999999999999
Q ss_pred hcCCCCeEEeCCC-----CceeEEEEEcCCch-HHHHHHHHHhccCcEEEEEeEEC----------------------Ce
Q psy3048 269 VEKDDRFELVCPP-----SMGLVCFRLKGDND-LTNQLYERLMSHKQIYIIKASFQ----------------------GR 320 (367)
Q Consensus 269 L~~~~g~~~~~~~-----~~~~v~f~~~~~~~-~~~~l~~~L~~~g~~~~~~~~~~----------------------~~ 320 (367)
|++++|+++..++ ....+.+.++.... ...++.+.|.++|+. +...... ..
T Consensus 264 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~-v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 342 (375)
T 2fnu_A 264 FKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGIL-AQVHYKPIYQYQLYQQLFNTAPLKSAEDFYH 342 (375)
T ss_dssp HTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEE-CBCCCCCGGGSHHHHHHHCCCCCHHHHHHHH
T ss_pred hhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCC-ccccccccccchhhhcCCCccCChHHHHHHh
Confidence 9999899886541 12344555543111 467899999888843 3211000 12
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.++|+++ +.+++++|+++++++|+++++++.
T Consensus 343 ~~lRi~~-~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 343 AEISLPC-HANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp HEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEecC-CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5899964 678899999999999999988753
No 55
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.86 E-value=3e-21 Score=185.22 Aligned_cols=262 Identities=7% Similarity=-0.022 Sum_probs=178.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec------CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC--
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS------DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-- 101 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~------~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-- 101 (367)
.-.|+++..+|.++..+++..|++++.++. ++++.+|+++|++++++.+ .+|++++++|++|.+.|
T Consensus 126 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~ 199 (407)
T 3nra_A 126 GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGA------RVFLFSNPNNPAGVVYSAE 199 (407)
T ss_dssp TCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTC------CEEEEESSCTTTCCCCCHH
T ss_pred CCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCC------cEEEEcCCCCCCCcccCHH
Confidence 446777889999999999999999999998 3678999999999998744 47888999999999988
Q ss_pred -hhhHHHHHhhcCcEEEEecccccccccChhhhh-h-hC-CCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccC
Q psy3048 102 -LEELGPICQEYNIWLHVDAAYAGSALLLPEYAH-L-KR-GLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFT 176 (367)
Q Consensus 102 -l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~-~~-~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~ 176 (367)
+++|+++|++||+++++|++|+.+.+....... . +. .....++++.+.+|+++ .+.++|+++.+ +.........
T Consensus 200 ~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~ 278 (407)
T 3nra_A 200 EIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKL 278 (407)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHH
Confidence 999999999999999999999875543211100 0 00 11224688889999997 44567887764 3322211100
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAY 254 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~ 254 (367)
...+... . ..+...++...+ +.+.+++.
T Consensus 279 ~~~~~~~-----------------------------------------------~---~~~~~~a~~~~l~~~~~~~~~~ 308 (407)
T 3nra_A 279 QAIVSLR-----------------------------------------------A---AGYSQAVLRGWFDEAPGWMEDR 308 (407)
T ss_dssp HHHHTSS-----------------------------------------------S---CHHHHGGGGGTTCCCTTHHHHH
T ss_pred HhhhccC-----------------------------------------------C---ChHHHHHHHHHHhccchHHHHH
Confidence 0000000 0 001111111112 22456777
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---CCeeEEEEEecCC
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---QGRPFLRFVVTSP 330 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~lRi~~~~~ 330 (367)
.++..++++++.+.|++++++.+..+.....+.+.++.......++.+.|.++ | +++.++.. .+..++|++++.
T Consensus 309 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~iRis~~~- 386 (407)
T 3nra_A 309 IARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAG-VVVTPGTEFSPHTADSVRLNFSQ- 386 (407)
T ss_dssp HHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHC-EECEEGGGTCTTCTTBEEEECCS-
T ss_pred HHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEeCC-
Confidence 88888999999999999888887655444555555543223356888888765 7 44544322 245789997642
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~ 352 (367)
+++|+++++++|+++++++.
T Consensus 387 --~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 387 --DHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp --CHHHHHHHHHHHHHHHHHHB
T ss_pred --CHHHHHHHHHHHHHHHHHhh
Confidence 79999999999999988764
No 56
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.86 E-value=8.7e-21 Score=183.77 Aligned_cols=267 Identities=14% Similarity=0.122 Sum_probs=175.3
Q ss_pred ceEEEecCCcchhHHHHHH----hCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAI----IGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~----~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
...|++++.+|.+...+.. ..|++++.+++++ ++.+|+++|++++++.+ .+|++++++|++|.+.|+++
T Consensus 123 ~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~~~ 196 (432)
T 3a9z_A 123 RPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTT------CLVTIMLANNETGVIMPISE 196 (432)
T ss_dssp CCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTE------EEEECCSBCTTTCBBCCHHH
T ss_pred CCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCc------eEEEEECcccCcccccCHHH
Confidence 3578889999999876654 3689999999875 78899999999987544 58899999999999999999
Q ss_pred HHHHHhhcC----------cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhc
Q psy3048 105 LGPICQEYN----------IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTF 174 (367)
Q Consensus 105 I~~l~~~~g----------i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 174 (367)
|.++|+++| +++++|++|+.+....+... . .+|+++.++||+++ |. +|++++++.....
T Consensus 197 i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~---~---~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~--- 265 (432)
T 3a9z_A 197 ISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVED---L---GVDFLTIVGHKFYG-PR-IGALYVRGVGKLT--- 265 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHH---H---CCSEEEEEGGGTTC-CS-CEEEEETTBTTTB---
T ss_pred HHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhh---c---CCCEEEEehhHhcC-Cc-ceEEEEccccccC---
Confidence 999999999 99999999976543322111 1 24999999999874 65 9999986542111
Q ss_pred cCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHH
Q psy3048 175 FTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAY 254 (367)
Q Consensus 175 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 254 (367)
...+.+...... ..+...........++.++++.+ .++++++
T Consensus 266 ~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~ 307 (432)
T 3a9z_A 266 PLYPMLFGGGQE-------------------------------------RNFRPGTENTPMIAGLGKAADLV-SENCETY 307 (432)
T ss_dssp CCCCSCCSSCGG-------------------------------------GGTSCSCCCHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CcCceeecCCcc-------------------------------------ccccCCCcCHHHHHHHHHHHHHH-HhhHHHH
Confidence 111111111000 00000001111123344455543 3478889
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEe--CC----CC-ceeEEEEEcCCchHHHHHHHHHh----ccCcEEEEEeE-------
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELV--CP----PS-MGLVCFRLKGDNDLTNQLYERLM----SHKQIYIIKAS------- 316 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~--~~----~~-~~~v~f~~~~~~~~~~~l~~~L~----~~g~~~~~~~~------- 316 (367)
.++..++++++.+.|++++|+++. .+ .. .+.++|.+.+......++.+.+. ..|.. +.+..
T Consensus 308 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~-~~~~~~~~~~~~ 386 (432)
T 3a9z_A 308 EAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGAS-CHSDHEDRPSPV 386 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCG-GGGGGTTSCCHH
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEecccc-ccCCCCCCccHH
Confidence 999999999999999886564432 33 12 23677877642112345555442 11211 00000
Q ss_pred --ECC------eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 317 --FQG------RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 317 --~~~------~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
..| ..++|+++ ..+++++|+++++++|+++++++..
T Consensus 387 l~~~g~~~~~~~~~iRis~-~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 387 LLSCGIPVDVARNAVRLSV-GRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HHHTTCCHHHHTTEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhcCCCccccCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 001 25899976 5778899999999999999887654
No 57
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=2.6e-20 Score=177.88 Aligned_cols=269 Identities=14% Similarity=0.089 Sum_probs=176.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...+++..|++++.+++++ ++.+|+++|++++++.+ .+|+ ++|++|.+.|+++|.++
T Consensus 78 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~l~~i~~l 148 (388)
T 1b9h_A 78 GTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRT------KVIM---PVHMAGLMADMDALAKI 148 (388)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTE------EEEC---CBCGGGCCCCHHHHHHH
T ss_pred cCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCc------eEEE---EeCCccCcCCHHHHHHH
Confidence 34677889999999999999999999999975 48999999999986544 2444 78899999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchh--hhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANH--LTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~--~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++|+|++|+.+....... +.....+++++++.||++.++ ..|+++.++... +....... . .+..
T Consensus 149 a~~~~~~li~D~a~~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~---~~~~ 220 (388)
T 1b9h_A 149 SADTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-S---CGRP 220 (388)
T ss_dssp HHHHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-B---TTCC
T ss_pred HHHcCCEEEEecchhcCCccCCee---cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-h---CCCC
Confidence 999999999999998654332110 111223588888899999875 467777765433 33221000 0 0000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
.....| . ....| ...+...+..++.+. ..+.+++..++..++++++.
T Consensus 221 ---~~~~~~----------------~--~~~~g----------~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~l~ 267 (388)
T 1b9h_A 221 ---RDDRRY----------------F--HKIAG----------SNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLS 267 (388)
T ss_dssp ---TTCSSC----------------C--CCSCC----------CBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHH
T ss_pred ---ccCccc----------------e--eeccc----------ccCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 00000 000112222222222 23456777888889999999
Q ss_pred HHhcCCCCeEEeCC-----C-CceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEEC---------------------
Q psy3048 267 DLVEKDDRFELVCP-----P-SMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQ--------------------- 318 (367)
Q Consensus 267 ~~L~~~~g~~~~~~-----~-~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~--------------------- 318 (367)
+.|++++|+++..+ + ..+.+++++++.. ....++.+.|.++|+. +......
T Consensus 268 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (388)
T 1b9h_A 268 RLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLP-AFAAFRAIYRTDAFWELGAPDESVDAIA 346 (388)
T ss_dssp HHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCC-EEECCCCGGGSHHHHHSSCCSSCHHHHH
T ss_pred HHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCC-cccccCccccChHhHhcCCCcccccccc
Confidence 99999989988753 2 2467788876421 2456899999988854 3321110
Q ss_pred ---------CeeEEEEEecCCCC-CHHHHHHHHHHHHHHHHH
Q psy3048 319 ---------GRPFLRFVVTSPET-NQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 319 ---------~~~~lRi~~~~~~~-~~edid~li~~l~~~~~~ 350 (367)
....+|+++ ++.+ |++||++++++|++++++
T Consensus 347 ~~~~~~~~~~~~~l~l~~-~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 347 RRCPNTDAISSDCVWLHH-RVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HTCHHHHHHHHHEEEEEG-GGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHhCeEEecC-CCCCCCHHHHHHHHHHHHHHHhh
Confidence 013699965 5677 899999999999998764
No 58
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=4.3e-21 Score=180.59 Aligned_cols=262 Identities=16% Similarity=0.131 Sum_probs=173.7
Q ss_pred CceEEEecCCcchhHHHH--HHhC--CcceEEEecCCCCCcCHHHHHH-HHHHHh-hCCCccEEEEEecCCCcccc---c
Q psy3048 29 SRLVAYASDQSNSSVEKS--AIIG--DVPVRQLRSDDNGVLRGDALLT-AVKEDL-AKGLIPCCLVATLGTTGTCA---F 99 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~--~~~~--g~~v~~v~~~~~~~~d~~~L~~-~l~~~~-~~~~~~~~vv~~~~~t~~G~---i 99 (367)
+.-.|++++..|++...+ +... |++++.++.+ ++.+|+++|++ ++++.. .++..+.+|+++++++ +|. .
T Consensus 82 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~ 159 (356)
T 1v72_A 82 PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTL 159 (356)
T ss_dssp TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCH
T ss_pred CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCH
Confidence 345677888999998766 6666 9999999875 57899999999 886521 1112246788888754 999 6
Q ss_pred CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCc
Q psy3048 100 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 100 ~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
+++++|.++|++||+++|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++.+ ++......
T Consensus 160 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~-~~~~~~~~---- 233 (356)
T 1v72_A 160 DEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFN-TSLATEMS---- 233 (356)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESS-GGGHHHHH----
T ss_pred HHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEEC-HHHHhhHH----
Confidence 7899999999999999999999975422110001111111 1458999999999 668777787763 33332211
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
++... . + . . . . .........++.+....+.++.++.
T Consensus 234 -~~~~~-~---~-~--~---------------------------------~-~--~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (356)
T 1v72_A 234 -YRRKR-A---G-H--L---------------------------------S-S--KMRFLSAQIDAYLTDDLWLRNARKA 269 (356)
T ss_dssp -HHHHH-T---T-C--C---------------------------------C-S--STHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred -HHhhc-c---C-c--h---------------------------------h-h--hHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 00000 0 0 0 0 0 0 0012222334444444566778888
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHH
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid 338 (367)
.++++++.+.|++++|+++..++..+.++++++ .++.++|.++|+. +.++.+. ..++|+++ +..++++|++
T Consensus 270 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~------~~~~~~l~~~gi~-v~~g~~~-~~~iRi~~-~~~~~~~~i~ 340 (356)
T 1v72_A 270 NAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD------SAMIDALLKAGFG-FYHDRWG-PNVVRFVT-SFATTAEDVD 340 (356)
T ss_dssp HHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC------HHHHHHHHHTTCB-CBCSSSS-TTEEEEEC-CTTCCHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC------HHHHHHHHhcCeE-EeccccC-CCeEEEEe-cCCCCHHHHH
Confidence 999999999999988999877777777777663 3688888888854 3322222 56899964 5778899999
Q ss_pred HHHHHHHHHHHHh
Q psy3048 339 FAWNEISHQSSEM 351 (367)
Q Consensus 339 ~li~~l~~~~~~~ 351 (367)
+++++|++++++.
T Consensus 341 ~~~~~l~~~l~~~ 353 (356)
T 1v72_A 341 HLLNQVRLAADRT 353 (356)
T ss_dssp HHHHHHHHTC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999886654
No 59
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.85 E-value=6.5e-21 Score=181.95 Aligned_cols=261 Identities=9% Similarity=0.011 Sum_probs=174.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|.+ +++++
T Consensus 114 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~ 187 (388)
T 1j32_A 114 GDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKT------KLLVFNTPSNPTGMVYTPDEVRA 187 (388)
T ss_dssp TCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcCCCHHHHHH
Confidence 34677788999999999999999999999864 67899999999987543 478889999999998 45999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCC----CCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~ 178 (367)
|+++|++||+++++|++|+.+.+....... +..+ ...|+++.+.||+++ ++| +|+++.++. .......
T Consensus 188 i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~sK~~~-~~G~r~G~~~~~~~-~~~~l~~--- 261 (388)
T 1j32_A 188 IAQVAVEAGLWVLSDEIYEKILYDDAQHLS-IGAASPEAYERSVVCSGFAKTYA-MTGWRVGFLAGPVP-LVKAATK--- 261 (388)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEEESTTTTT-CTTTCCEEEECCHH-HHHHHHH---
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCCC-HHHccccccCCEEEEeechhccC-CcccceEEEEeCHH-HHHHHHH---
Confidence 999999999999999999875542211000 0001 124899999999995 345 888887532 2221100
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
+..... +. ...+....+..++.. +.+.+++..++.
T Consensus 262 -~~~~~~----------------------------------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~ 296 (388)
T 1j32_A 262 -IQGHST----------------------------------------SN---VCTFAQYGAIAAYEN-SQDCVQEMLAAF 296 (388)
T ss_dssp -HHHTTT----------------------------------------CS---CCHHHHHHHHHHHHS-CSHHHHHHHHHH
T ss_pred -HHhhcc----------------------------------------cC---CCHHHHHHHHHHHhC-CcHHHHHHHHHH
Confidence 000000 00 000111222233332 345678888899
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-ECCeeEEEEEecCCCCCHHH
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-FQGRPFLRFVVTSPETNQCD 336 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~~~~~~lRi~~~~~~~~~ed 336 (367)
.++++++.+.|++++|+++..+.....+.+.++.......++.+.|.+ .|+ .+.++. +....++|+++. +++++
T Consensus 297 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~iRis~~---~~~~~ 372 (388)
T 1j32_A 297 AERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQV-ATVPGAAFGADDCIRLSYA---TDLDT 372 (388)
T ss_dssp HHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCE-ECEEGGGGTCTTBEEEECC---SCHHH
T ss_pred HHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCE-EEeChhhhCCCCcEEEEec---CCHHH
Confidence 999999999999988888765443223333443101135678888876 574 444332 222468999763 58999
Q ss_pred HHHHHHHHHHHHHHh
Q psy3048 337 VAFAWNEISHQSSEM 351 (367)
Q Consensus 337 id~li~~l~~~~~~~ 351 (367)
++++++.|+++++++
T Consensus 373 i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 373 IKRGMERLEKFLHGI 387 (388)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 60
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.85 E-value=2.4e-20 Score=176.68 Aligned_cols=247 Identities=14% Similarity=0.042 Sum_probs=172.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCccccc---CChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAF---DNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~ 106 (367)
-.|+++..+|.++...++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+ +++++|+
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~l~~i~ 183 (367)
T 3euc_A 110 AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQP------AIVYLAYPNNPTGNLFDAADMEAIV 183 (367)
T ss_dssp CEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCC------SEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCC------CEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 4566778899999999999999999999988899999999999987 44 377788999999999 4688888
Q ss_pred HHHhhc--CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~--gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|++| |+++++|++|+.+.... ...... ....++++.+.+|++..+.++|+++.. ++...........
T Consensus 184 ~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~----- 254 (367)
T 3euc_A 184 RAAQGSVCRSLVVVDEAYQPFAQES--WMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAGD-PQWLEQLDKVRPP----- 254 (367)
T ss_dssp HHTBTTSCBCEEEEECTTCCSSSCC--SGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEEC-HHHHHHHGGGCCS-----
T ss_pred HhhhhcCCCcEEEEeCcchhhcccc--hHHHHh-hCCCEEEEecchhhcccccCceeeeeC-HHHHHHHHHhCCC-----
Confidence 889999 99999999998643211 111111 112357888999994444567887773 3333221110000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
| . ...+....+..+++. .+.+++..++..+++++
T Consensus 255 ----------~-------------------------------~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~ 288 (367)
T 3euc_A 255 ----------Y-------------------------------N---VNVLTEATALFALEH--VAVLDEQAAQLRAERSR 288 (367)
T ss_dssp ----------S-------------------------------C---CCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHH
T ss_pred ----------C-------------------------------C---CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHH
Confidence 0 0 000112233333333 45678888999999999
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---CCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---QGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~edid~li 341 (367)
+.+.|+++||+++ .++..+.+.+.++ ...++.+.|.++|+. +.+... .+..++|+++. +++|+++++
T Consensus 289 l~~~l~~~~g~~~-~~~~~~~~~~~~~----~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~iRis~~----~~~~i~~~~ 358 (367)
T 3euc_A 289 VAEGMAAHGGVTV-FPSAANFLLARVP----DAAQTFDRLLARKVL-IKNVSKMHPLLANCLRVTVS----TPEENAQFL 358 (367)
T ss_dssp HHHHHHTSTTCEE-CCCSSSEEEEECS----CHHHHHHHHHTTTEE-CEECGGGCGGGTTEEEEECC----CHHHHHHHH
T ss_pred HHHHHHhCCCcEE-CCCCCeEEEEECC----CHHHHHHHHHHCCeE-EEECCccCCCCCCEEEEecC----CHHHHHHHH
Confidence 9999999999985 4555566667665 256888889888854 443321 12469999753 799999999
Q ss_pred HHHHHHH
Q psy3048 342 NEISHQS 348 (367)
Q Consensus 342 ~~l~~~~ 348 (367)
++|++++
T Consensus 359 ~~l~~~l 365 (367)
T 3euc_A 359 EAFAASL 365 (367)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999875
No 61
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.85 E-value=1.5e-20 Score=178.44 Aligned_cols=263 Identities=10% Similarity=0.084 Sum_probs=176.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|+++..+|.++..+++..|++++.++.++++.+|+++|++++++.+ .+|+ ++|++|.+.|+++|.++|
T Consensus 78 gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~---~~n~~G~~~~~~~i~~~~ 148 (374)
T 3uwc_A 78 GDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDKT------KAIM---PVHYTGNIADMPALAKIA 148 (374)
T ss_dssp TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHHH
T ss_pred CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCc------eEEE---EeCCcCCcCCHHHHHHHH
Confidence 4467788899999999999999999999998789999999999887644 3444 678999999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+....... .+ ...|++++++| |+++++...|+++.+++......... ...+..
T Consensus 149 ~~~~~~li~D~~~~~g~~~~~~~----~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~----~~~~~~- 218 (374)
T 3uwc_A 149 KKHNLHIVEDACQTILGRINDKF----VG-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLY----RNHGLI- 218 (374)
T ss_dssp HHTTCEEEEECTTCTTCEETTEE----TT-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHH----TBTTEE-
T ss_pred HHcCCEEEEeCCCccCceeCCee----cc-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHH----HhcCcc-
Confidence 99999999999998654422110 11 12499999977 99976444666666554433221100 000000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
..| . ....+..+....+.+++.....++++++.++..++++++.+
T Consensus 219 -----~~~----------------------------~--~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (374)
T 3uwc_A 219 -----NRD----------------------------V--CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQ 263 (374)
T ss_dssp -----ETT----------------------------E--ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred -----ccC----------------------------c--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000011123444455555567788899999999999999
Q ss_pred HhcCCCC-eEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE------------------------CC
Q psy3048 268 LVEKDDR-FELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF------------------------QG 319 (367)
Q Consensus 268 ~L~~~~g-~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~------------------------~~ 319 (367)
.|+++++ +++...+. .....|.+.. ....++.+.|.++|+. +.+... ..
T Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (374)
T 3uwc_A 264 SFVDLSEFIDVPVRREGVYHVFHIYVLRV--KYRDQLFQYLKDNGIE-VKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHG 340 (374)
T ss_dssp HTGGGTTTEECCCCCTTEECCCSSEEEEE--TTHHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHH
T ss_pred HhccCCCeEEeccCCCCCceeeEEEEEEc--CCHHHHHHHHHHCCCc-cccCCCCccccChhhhhcCCccCCCccHHHHH
Confidence 9999988 88754321 1112222221 1256888899888853 332210 00
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
...+|++ .+.++|++||++++++|++++++
T Consensus 341 ~~~lrl~-~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 341 EAVITLP-AHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHEEEEC-CCTTSCHHHHHHHHHHHHHHHHT
T ss_pred hCEEEcc-CCCCCCHHHHHHHHHHHHHHHHh
Confidence 2689995 57888999999999999999875
No 62
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.85 E-value=3.2e-20 Score=174.71 Aligned_cols=261 Identities=15% Similarity=0.101 Sum_probs=172.5
Q ss_pred CceEEEecCCcchhHHHH--HHhCCcceEEEecCCCCCcCHHHHHHHHHHHh-hCCCccEEEEEecCCCcccccCC---h
Q psy3048 29 SRLVAYASDQSNSSVEKS--AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL-AKGLIPCCLVATLGTTGTCAFDN---L 102 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~--~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~-~~~~~~~~vv~~~~~t~~G~i~d---l 102 (367)
+.-.|++++.+|.+...+ ++..|++++.++.+ ++.+|+++|++++++.. +++..+.+|+++++ |++|.+.| +
T Consensus 89 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l 166 (359)
T 1svv_A 89 PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQEL 166 (359)
T ss_dssp TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHH
T ss_pred CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHH
Confidence 345788889999998873 77789999999985 78999999999998751 12223467888887 68999988 9
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
++|.++|++||+++++|++|.++.+.........-++ ..+|++++++||+ +.|.|+|++++++ +...... .+.
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~-~~~~~~~----~~~ 240 (359)
T 1svv_A 167 EDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILND-ALKPNAR----HLI 240 (359)
T ss_dssp HHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSG-GGCTTHH----HHH
T ss_pred HHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcc-cHHHHHH----HHH
Confidence 9999999999999999999943321110000000000 2359999999998 4578889888743 2222110 000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
..... . + ..+. .....+ ...+...++++..++..++
T Consensus 241 ~~~~~-----~--~---------------------------------~~~~-~~~~~~---~~~l~~~~~~~~~~~~~~~ 276 (359)
T 1svv_A 241 KQRGA-----L--M---------------------------------AKGW-LLGIQF---EVLMKDNLFFELGAHSNKM 276 (359)
T ss_dssp HHTTC-----C--C---------------------------------TTTH-HHHHHH---HHHTSTTHHHHHHHHHHHH
T ss_pred hcCCc-----c--c---------------------------------ccch-hhHHHH---HHHHhhhhHHHHHHHHHHH
Confidence 00000 0 0 0000 001111 1234445678888999999
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASFQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~l 340 (367)
++++.+.| +.+|+++..++..+.+++.++ .++.++|.++ |+.. .+....+..++|+++ +..++++|++++
T Consensus 277 ~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gi~v-~~~~~~~~~~iRi~~-~~~~~~~~i~~~ 347 (359)
T 1svv_A 277 AAILKAGL-EACGIRLAWPSASNQLFPILE------NTMIAELNNDFDMYT-VEPLKDGTCIMRLCT-SWATEEKECHRF 347 (359)
T ss_dssp HHHHHHHH-HHTTCCBSSCCSSSEECBEEE------HHHHHHHTTTEECEE-EEEETTTEEEEEEEC-CTTCCHHHHHHH
T ss_pred HHHHHHHh-ccCCeEEccCCccceEEEEcC------HHHHHHHHHhcCEEE-EecccCCCceEEEEc-cCcCCHHHHHHH
Confidence 99999999 567888776666666655543 4788889888 7543 222123567999964 566789999999
Q ss_pred HHHHHHHHHH
Q psy3048 341 WNEISHQSSE 350 (367)
Q Consensus 341 i~~l~~~~~~ 350 (367)
+++|++++++
T Consensus 348 ~~~l~~~~~~ 357 (359)
T 1svv_A 348 VEVLKRLVAS 357 (359)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHHHhc
Confidence 9999988664
No 63
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.85 E-value=7.8e-20 Score=175.16 Aligned_cols=260 Identities=12% Similarity=0.014 Sum_probs=178.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++..|.+...+++..|++++.++. +|+++|++++++... ..+.+|++++++|++|.+.|+++|.++|
T Consensus 127 gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~ 199 (398)
T 3a2b_A 127 NDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIA 199 (398)
T ss_dssp TCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred CCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHH
Confidence 446777889999999999999999999986 589999999976321 0246888899999999999999999999
Q ss_pred hhcCcEEEEecccccccccC-hhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLL-PEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+.. ........++ +++|+++.+.||+++ |+| |+++.+ ++...........+....
T Consensus 200 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~--- 273 (398)
T 3a2b_A 200 NEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFSA--- 273 (398)
T ss_dssp HHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSSB---
T ss_pred HHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceecC---
Confidence 99999999999997664311 0000111122 235999999999998 667 888774 333322111011111000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRA-LKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
+..... ..+..+++.. +.+++..++..++++++.
T Consensus 274 -------------------------------------------~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~ 308 (398)
T 3a2b_A 274 -------------------------------------------SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAK 308 (398)
T ss_dssp -------------------------------------------CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHH
Confidence 000111 1223444442 235677788889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC----CeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ----GRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~----~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|+++ |+++.. +..+.+.+.++. .....++.+.|.++|+ .+.+.... +..++|+++ ..+++++|++++++
T Consensus 309 ~~L~~~-g~~~~~-~~g~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~iRis~-~~~~~~e~i~~~~~ 383 (398)
T 3a2b_A 309 AQLLDH-GFDLGA-TESPILPIFIRS-NEKTFWVTKMLQDDGV-FVNPVVSPAVPAEESLIRFSL-MATHTYDQIDEAIE 383 (398)
T ss_dssp HHHHHT-TCCBCS-CCSSEEEEECCC-HHHHHHHHHHHHHTTE-ECEEECTTTSCGGGCEEEEEC-CTTCCHHHHHHHHH
T ss_pred HHHHhc-CCCcCC-CCCCEEEEEcCC-HHHHHHHHHHHHHCCc-EEEeeCCCCCCCCCceEEEEE-eCCCCHHHHHHHHH
Confidence 999887 777654 445677777653 3346689999998874 44443221 356899976 45678999999999
Q ss_pred HHHHHHHHhh
Q psy3048 343 EISHQSSEMN 352 (367)
Q Consensus 343 ~l~~~~~~~~ 352 (367)
+|+++++++.
T Consensus 384 ~l~~~l~~~~ 393 (398)
T 3a2b_A 384 KMVKVFKQAE 393 (398)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 9999988764
No 64
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.84 E-value=5.8e-21 Score=188.13 Aligned_cols=273 Identities=12% Similarity=0.043 Sum_probs=171.1
Q ss_pred ceEEEecCCcchhHHHH--------HHhCCcceEEEec--C-CCCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKS--------AIIGDVPVRQLRS--D-DNGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~--------~~~~g~~v~~v~~--~-~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~G 97 (367)
.-.|++++.+|.+.... +...|..++.++. + +++.+|+++|+++++ +.+ .+|++ ++++++
T Consensus 134 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~t------klIi~-~~sn~~- 205 (483)
T 1rv3_A 134 HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHP------KLIIA-GTSCYS- 205 (483)
T ss_dssp TCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCC------SEEEE-CCSSCC-
T ss_pred CCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCC------cEEEE-eCCcCC-
Confidence 34566677788776432 3334433555554 5 579999999999998 444 46666 777776
Q ss_pred ccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 98 AFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 98 ~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
.+.|+++|.++|++||+++++|++|+.+....+..... +..+|++++++||+|.+|.| |+++++++. .. +.
T Consensus 206 ~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p---~~~~div~~s~~K~l~Gprg-G~i~~~~~~-~~--~~-- 276 (483)
T 1rv3_A 206 RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSP---FEHCHVVTTTTHKTLRGCRA-GMIFYRRGV-RS--VD-- 276 (483)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCG---GGTCSEEEEESSGGGCCCSC-EEEEEECSB-CC------
T ss_pred CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCC---CCCCcEEEecCcccCCCCCc-eEEEEcchh-hh--hc--
Confidence 88899999999999999999999998665432221111 12469999999999999988 999987642 10 00
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHHHHhhHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
...+. ...|.+...+.... .| ...++... ...++.+++......+++++.+
T Consensus 277 ---~~~g~------~~~y~~~~~~~~~~-~~------------------~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~ 328 (483)
T 1rv3_A 277 ---PKTGK------EILYNLESLINSAV-FP------------------GLQGGPHNHAIAGVAVALKQAMTPEFKEYQR 328 (483)
T ss_dssp --------------CCBCCHHHHHHHHH-TT------------------TTCCSCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred ---cccCc------chhhHHHHHhhhhc-CC------------------cccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 00000 00000000000000 00 00111111 1234556676666668899999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEE----EeE--ECCeeEEEEEecC
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KAS--FQGRPFLRFVVTS 329 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~~--~~~~~~lRi~~~~ 329 (367)
+..++++++.+.|+++ |++++.+. ....+.+.+........++.+.|.+.|+ .+. ++. ..+..++|+++.
T Consensus 329 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI-~v~~~~~pg~~~~~~~~~iRis~~- 405 (483)
T 1rv3_A 329 QVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSI-ACNKNTCPGDKSALRPSGLRLGTP- 405 (483)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTE-ECEEECCSSCSCTTSCCEEEEECH-
T ss_pred HHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCc-EEecCCCCCCCcCCCCceEEeecC-
Confidence 9999999999999988 89987643 2334555553211224567777777774 444 222 113568999764
Q ss_pred CCCC----HHHHHHHHHHHHHHHHH
Q psy3048 330 PETN----QCDVAFAWNEISHQSSE 350 (367)
Q Consensus 330 ~~~~----~edid~li~~l~~~~~~ 350 (367)
.+++ ++|++++++.|+++++.
T Consensus 406 ~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 406 ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 3344 99999999999998876
No 65
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.84 E-value=8.6e-20 Score=173.38 Aligned_cols=260 Identities=12% Similarity=0.033 Sum_probs=174.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|+++..+|.++...++..|++++.++.+ .++.+|+++|++++++.+ .+|++++++|++|.+.| +++
T Consensus 105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~~~~l~~ 178 (375)
T 3op7_A 105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTT------KMICINNANNPTGAVMDRTYLEE 178 (375)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTC------CEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCC------eEEEEcCCCCCCCCCCCHHHHHH
Confidence 3457778899999999999999999999886 356799999999997654 47788899999999999 999
Q ss_pred HHHHHhhcCcEEEEecccccccccC-hhhhhhhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|.++|++||+++++|++|+.+.... ... ....+ .++.+.+.+|.++. +.++|+++. +++...... ....+.
T Consensus 179 i~~la~~~~~~li~De~~~~~~~~~~~~~-~~~~~---~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~-~~~~~~- 251 (375)
T 3op7_A 179 LVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYD---KGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILR-DYRDYT- 251 (375)
T ss_dssp HHHHHHTTTCEEEEECCSCCCSSSCCCCH-HHHCT---TEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHT-TTGGGT-
T ss_pred HHHHHHHcCCEEEEEcccccccccCCCch-hhhcC---CEEEEeEChhhcCCcccceEEEEe-CHHHHHHHH-HHHhhh-
Confidence 9999999999999999998754421 111 11122 26778889999973 355688777 444333221 100000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. .....+....+..++.. ..+.+++..++..+++
T Consensus 252 --------------------------------------------~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 285 (375)
T 3op7_A 252 --------------------------------------------M-ICAGVFDDLVAQLALAH-YQEILERNRHILEENL 285 (375)
T ss_dssp --------------------------------------------T-SCCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------c-cCCCcHHHHHHHHHHhc-cHHHHHHHHHHHHHHH
Confidence 0 00011112222333332 2345667777778899
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~l 340 (367)
+++.+.|++++++.+..+.....+.+.++. .....++.++|. +.|+ .+.++ .+....++|+++.. +.++++.+
T Consensus 286 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi-~v~~g~~~~~~~~iRi~~~~---~~~~i~~~ 360 (375)
T 3op7_A 286 AILDQWIEEEPLVSYIRPAVVSTSFVKIAV-DMPMEDFCLQLLQEHGV-LLVPGNRFERDGYVRLGFAC---EQETLIKG 360 (375)
T ss_dssp HHHHHHHHHCTTEEECCCSSSSCEEEEECC-SSCHHHHHHHHHHHHCE-ECEEGGGGTCTTEEEECCCS---CHHHHHHH
T ss_pred HHHHHHHhhCCCceEecCCCeEEEeEEcCC-CCCHHHHHHHHHHhCCE-EEeChhhhCCCCeEEEEecC---CHHHHHHH
Confidence 999999998889987765544445555543 233567888774 6674 44433 23335699996532 45899999
Q ss_pred HHHHHHHHHHhhC
Q psy3048 341 WNEISHQSSEMNL 353 (367)
Q Consensus 341 i~~l~~~~~~~~~ 353 (367)
+++|+++++++.+
T Consensus 361 l~~l~~~l~~~~~ 373 (375)
T 3op7_A 361 LEKLSQFLRRFDK 373 (375)
T ss_dssp HHHHHHHHGGGC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999876543
No 66
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=5.5e-21 Score=182.86 Aligned_cols=264 Identities=11% Similarity=0.059 Sum_probs=175.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+-.|++++.+|.+...+++..|++++.++.+ +++.+|+++|++++++.+ .+|+ ++|++|.+.|+++|.++
T Consensus 96 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~---~~n~tG~~~~~~~i~~l 166 (391)
T 3dr4_A 96 GDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRT------KAIM---PVHLYGQICDMDPILEV 166 (391)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHH
T ss_pred cCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCc------eEEE---EECCCCChhhHHHHHHH
Confidence 4467888999999999999999999999997 578999999999987644 3444 35789999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|++||+++++|++|+.+....+... ..+.++++++++.||++.++ ..|+++.+++....... .+...+..
T Consensus 167 ~~~~~~~li~D~a~~~g~~~~~~~~---~~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~~~~----~~~~~g~~-- 236 (391)
T 3dr4_A 167 ARRHNLLVIEDAAEAVGATYRGKKS---GSLGDCATFSFFGNAIITTG-EGGMITTNDDDLAAKMR----LLRGQGMD-- 236 (391)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEET---TSSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHH----HHHBTTCC--
T ss_pred HHHcCCEEEEECcccccceECCeee---cccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHHHHH----HHHhcCCC--
Confidence 9999999999999986554332211 11223466677789999763 45666665543332211 00000000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
....+ +....+..+....+.+++.....++++++.++.+++++++.+.
T Consensus 237 --~~~~~------------------------------~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~ 284 (391)
T 3dr4_A 237 --PNRRY------------------------------WFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQK 284 (391)
T ss_dssp --TTSTT------------------------------CCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcc------------------------------cccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000011122234455555555677888999999999999999
Q ss_pred hcCCCCeEEeCC--C-----CceeEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEE---------------------CC
Q psy3048 269 VEKDDRFELVCP--P-----SMGLVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASF---------------------QG 319 (367)
Q Consensus 269 L~~~~g~~~~~~--~-----~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~---------------------~~ 319 (367)
|+++ |+++..+ + ...++.+.++.. .....++.+.|.++|+. +.+... ..
T Consensus 285 L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~-v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 362 (391)
T 3dr4_A 285 LARL-GNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIE-SRPVFHPMHIMPPYAHLATDDLKIAEACG 362 (391)
T ss_dssp HGGG-TTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCC-CEECCCCGGGSGGGGGGCCTTCHHHHHHH
T ss_pred hhcC-CccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCc-eeecCCccccChhhhhcCcCCChHHHHHH
Confidence 9998 8877654 2 223456666431 12356899999999854 333210 01
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...+|++ .++++|++||++++++|+++
T Consensus 363 ~~~lrl~-~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 363 VDGLNLP-THAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHEEEEC-CCTTCCHHHHHHHHHHHHTT
T ss_pred hCeEEcc-CCCCCCHHHHHHHHHHHHHH
Confidence 3579994 57889999999999999875
No 67
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.84 E-value=8.6e-20 Score=175.02 Aligned_cols=260 Identities=15% Similarity=0.073 Sum_probs=177.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++..+|.+...+++..|++++.++.+ |+++|+++++.... ..+.+|++++++|++|.+.|+++|.++|+
T Consensus 133 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 205 (401)
T 2bwn_A 133 LIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAE 205 (401)
T ss_dssp CEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred CEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHH
Confidence 367778899999999999999999999875 89999999874321 12468899999999999999999999999
Q ss_pred hcCcEEEEecccccccccCh--hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLP--EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
+||+++++|++|+.+.+... .... ..++ ...|.+..+.+|+++.| | |+++.. +............+...
T Consensus 206 ~~~~~li~Dea~~~g~~~~~g~~~~~-~~~~~~~~~i~~~s~sK~~~~~-G-G~~~~~-~~~~~~l~~~~~~~~~~---- 277 (401)
T 2bwn_A 206 EFGALTYIDEVHAVGMYGPRGAGVAE-RDGLMHRIDIFNGTLAKAYGVF-G-GYIAAS-ARMVDAVRSYAPGFIFS---- 277 (401)
T ss_dssp HHTCEEEEECTTTTTTSSTTSCCHHH-HHTCGGGCSEEEEESSSTTCSC-C-EEEEEC-HHHHHHHHHHCHHHHTS----
T ss_pred HcCCEEEEeccccccccCCCCceeee-ccCccccCcEEEeechhhccCC-C-CEEecC-HHHHHHHHHhCcCceec----
Confidence 99999999999985543110 0111 1122 23488888999999864 3 666653 33222110001111100
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
.. .....+.++.++++.+...|++++.++..++++++.+
T Consensus 278 ----------------------------------------~~-~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 316 (401)
T 2bwn_A 278 ----------------------------------------TS-LPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKM 316 (401)
T ss_dssp ----------------------------------------BC-CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CC-CCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 00 0112234555667666666778889999999999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
.|+++ |+++.. +..+++++.++. .....++.+.|. +.|+ .+.+... .+..++|+++ +.+++++|++++++
T Consensus 317 ~L~~~-g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~L~~~~gi-~v~~~~~~~~~~~~~~iRis~-~~~~t~~~i~~~~~ 391 (401)
T 2bwn_A 317 RLKAL-GMPIID-HGSHIVPVVIGD-PVHTKAVSDMLLSDYGV-YVQPINFPTVPRGTERLRFTP-SPVHDLKQIDGLVH 391 (401)
T ss_dssp HHHHH-TCCBCC-CSSSCEEEECCC-HHHHHHHHHHHHHHHCE-ECCEECTTTSCTTCCEEEECC-CTTSCHHHHHHHHH
T ss_pred HHHHC-CCcccC-CCCCeEEEEeCC-hHHHHHHHHHHHhcCCE-EEeecCCCCCCCCCceEEEEe-eCCCCHHHHHHHHH
Confidence 99887 877664 445678887753 334568888886 6674 4433321 1335899966 56789999999999
Q ss_pred HHHHHHHHh
Q psy3048 343 EISHQSSEM 351 (367)
Q Consensus 343 ~l~~~~~~~ 351 (367)
+|+++++++
T Consensus 392 ~l~~~~~~~ 400 (401)
T 2bwn_A 392 AMDLLWARC 400 (401)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHhc
Confidence 999986643
No 68
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.84 E-value=3e-20 Score=178.64 Aligned_cols=260 Identities=11% Similarity=-0.011 Sum_probs=175.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.| +++
T Consensus 125 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~~ 198 (406)
T 1xi9_A 125 GDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT------KAIAVINPNNPTGALYDKKTLEE 198 (406)
T ss_dssp TCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCc------eEEEEECCCCCCCCCcCHHHHHH
Confidence 34677788899999999999999999999863 57799999999987643 47778899999999865 999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhhhhCCCCCc-ceeeeccccccccC-CcceeEEE-ecc----hhhhhhcc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYV-DSFAFNAHKWLLTN-HDCSAMWV-KNA----NHLTNTFF 175 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~-D~~~~~~hK~l~~p-~g~g~l~~-~~~----~~~~~~~~ 175 (367)
|.++|++||+++++|++|+.+.+... .... + + ... |+++.+.||+++.| ..+|++++ .++ +.......
T Consensus 199 i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~-~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~ 275 (406)
T 1xi9_A 199 ILNIAGEYEIPVISDEIYDLMTYEGEHISPGS-L-T-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDR 275 (406)
T ss_dssp HHHHHHHHTCCEEEECTTTTCBSSSCCCCHHH-H-C-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccccccCCCCCCHHH-c-C-CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHH
Confidence 99999999999999999987654211 1111 1 1 234 67888999999732 34888883 233 33322110
Q ss_pred CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHH
Q psy3048 176 TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 176 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
...+. .. ...+....+.++++. +.+++++..
T Consensus 276 -~~~~~-~~----------------------------------------------~~~~~~~a~~~~l~~-~~~~~~~~~ 306 (406)
T 1xi9_A 276 -LARIR-LC----------------------------------------------PNTPAQFAAIAGLTG-PMDYLKEYM 306 (406)
T ss_dssp -HHHHT-CC----------------------------------------------SCSHHHHHHHHHHHS-CCHHHHHHH
T ss_pred -HHHhh-cC----------------------------------------------CCHHHHHHHHHHHhC-CcHHHHHHH
Confidence 00000 00 000112233334432 344578888
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeE-EEEEcCC-chHHHHHHHHHh-ccCcEEEEEeE-EC--CeeEEEEEecC
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLV-CFRLKGD-NDLTNQLYERLM-SHKQIYIIKAS-FQ--GRPFLRFVVTS 329 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v-~f~~~~~-~~~~~~l~~~L~-~~g~~~~~~~~-~~--~~~~lRi~~~~ 329 (367)
++..++++++.+.|+++||+++..+. .+.+ .+.++.. .....++.+.|. ++|+ .+.+.. +. +..++|+++.
T Consensus 307 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi-~v~~g~~f~~~~~~~lRis~~- 383 (406)
T 1xi9_A 307 KKLKERRDYIYKRLNEIPGISTTKPQ-GAFYIFPKIEVGPWKNDKEFVLDVLHNAHV-LFVHGSGFGEYGAGHFRAVFL- 383 (406)
T ss_dssp HHHHHHHHHHHHHHHTSTTEECCCCC-BSSEECCEECSCSCSSHHHHHHHHHHHHCE-ECEEGGGGCGGGTTBEEEECC-
T ss_pred HHHHHHHHHHHHHHHhCCCCeeecCC-eeEEEEEecCccCCCCHHHHHHHHHHhCCE-EEeCchhcCCCCCCEEEEEec-
Confidence 88999999999999998898876443 3433 3355420 123567888887 6774 444332 21 2468999763
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~~ 352 (367)
+++++++++++.|+++++++.
T Consensus 384 --~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 384 --PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp --SCHHHHHHHHHHHHHHHHHC-
T ss_pred --CCHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999987653
No 69
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.84 E-value=4e-19 Score=170.96 Aligned_cols=255 Identities=14% Similarity=0.058 Sum_probs=175.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++..|.+...++...|++++.++. +|+++|++++++.. +.+|++++++|++|.+.|+++|.++|
T Consensus 143 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la 212 (409)
T 3kki_A 143 NTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNIS 212 (409)
T ss_dssp TCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred CCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHH
Confidence 446777899999999999999999988765 48999999998752 24888899999999999999999999
Q ss_pred hhcCcEEEEecccccccccCh--hhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLP--EYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++||+++++|++|+.+.+... ..... .++ ..+|+++.+.+|+++.+ .|+++.+. ............+....
T Consensus 213 ~~~~~~li~De~~~~g~~g~~g~~~~~~-~~~~~~~di~~~s~sK~~~~~--gg~v~~~~-~~~~~~~~~~~~~~~~~-- 286 (409)
T 3kki_A 213 KEFGCALLVDESHSLGTHGPNGAGLLAE-LGLTREVHFMTASLAKTFAYR--AGAIWCNN-EVNRCVPFISYPAIFSS-- 286 (409)
T ss_dssp HHHTCEEEEECTTTTTTSSGGGCCHHHH-HTCGGGCSEEEEESSSTTCSS--CEEEEESS-SGGGTHHHHCHHHHHSB--
T ss_pred HHcCCEEEEECCccccccCCCCCcchhh-cCCCCCCCEEEeecchhhCCC--ceEEEECH-HHHHHHHHhCcCccccC--
Confidence 999999999999987543210 01111 122 24689999999999865 36666543 32221111111111110
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. .......++.++++.... .+++.++..++++++.
T Consensus 287 ------------------------------------------~-~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~ 321 (409)
T 3kki_A 287 ------------------------------------------T-LLPYEAAGLETTLEIIES--ADNRRQHLDRMARKLR 321 (409)
T ss_dssp ------------------------------------------C-CCHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------C-CcHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHH
Confidence 0 000112233344443322 2567778889999999
Q ss_pred HHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE----ECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 267 DLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS----FQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
+.|+++ |+++. +..+.+.+.++. .....++.++|.++|++ +.+.. ..+..++|+++ ...++++|++++++
T Consensus 322 ~~L~~~-g~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~~Gv~-v~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~~~ 395 (409)
T 3kki_A 322 IGLSQL-GLTIR--SESQIIGLETGD-ERNTEKVRDYLESNGVF-GSVFCRPATSKNKNIIRLSL-NSDVNDEQIAKIIE 395 (409)
T ss_dssp HHHHTT-TCCCC--CSSSEEEEEEES-HHHHHHHHHHHHHTTEE-CEEECTTSSCTTCEEEEEEC-CTTCCHHHHHHHHH
T ss_pred HHHHHc-CCccC--CCCCEEEEEeCC-HHHHHHHHHHHHHCCce-EeeeCCCCcCCCCcEEEEEc-cCCCCHHHHHHHHH
Confidence 999987 77654 355677777754 33456789999999854 43322 23467999976 46778999999999
Q ss_pred HHHHHHHHh
Q psy3048 343 EISHQSSEM 351 (367)
Q Consensus 343 ~l~~~~~~~ 351 (367)
+|++++++.
T Consensus 396 ~l~~~l~~~ 404 (409)
T 3kki_A 396 VCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 999998764
No 70
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.84 E-value=3.8e-19 Score=167.83 Aligned_cols=251 Identities=12% Similarity=0.083 Sum_probs=174.9
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGPI 108 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~l 108 (367)
.|+++..+|.++...++..|++++.++.++++.+++++|++++++ + .+|++++++|++|.+.| +++|+++
T Consensus 100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~ 172 (361)
T 3ftb_A 100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKL 172 (361)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHH
T ss_pred cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 566677899999999999999999999987788999999999876 4 37889999999999965 6778888
Q ss_pred HhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++++|++|+.+... .... ....+....++++.+.+|.++ .+.++|++++.+++...........
T Consensus 173 ~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~------- 244 (361)
T 3ftb_A 173 AEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP------- 244 (361)
T ss_dssp HHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT-------
T ss_pred hhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC-------
Confidence 88999999999999866552 1000 001111122466778999997 4456788775555444322111000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la~~l 265 (367)
+ + ...+...++...+ ..+.+++..++..++++++
T Consensus 245 --------~-------------------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 279 (361)
T 3ftb_A 245 --------W-------------------------------N------INCFAEMAAINCLKDTNYIEESLLWIKKERKRF 279 (361)
T ss_dssp --------T-------------------------------C------SCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred --------C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 0 0 0012222222222 2456788888999999999
Q ss_pred HHHhcCCCCeE-EeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 266 ADLVEKDDRFE-LVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 266 ~~~L~~~~g~~-~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edid~li 341 (367)
.+.|+++|++. +. ++..+.+.+++++ ....++.+.|.++|+ .+.++. + .+..++|+++. +++|+++++
T Consensus 280 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~ 351 (361)
T 3ftb_A 280 IEELNKIGFIKRVF-SPHANFVLCRLEN--ISGEKLYDSLLKEDI-VIRRCCNFIGLDDSFVRFAIK----DEKKNTKFL 351 (361)
T ss_dssp HHHHHHSSSEEEEE-CCSSSEEEEEESS--SCHHHHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHH
T ss_pred HHHHHhCCCCceec-CCCCeEEEEEcCC--CCHHHHHHHHHHCCe-EEeeCccCCCCCCCEEEEEcC----CHHHHHHHH
Confidence 99999999998 55 4455667777764 235789999998874 444432 2 22569999753 688999999
Q ss_pred HHHHHHHHH
Q psy3048 342 NEISHQSSE 350 (367)
Q Consensus 342 ~~l~~~~~~ 350 (367)
++|+++.+.
T Consensus 352 ~~l~~~~~~ 360 (361)
T 3ftb_A 352 RALKGVENN 360 (361)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999988654
No 71
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.84 E-value=8.8e-21 Score=180.28 Aligned_cols=262 Identities=13% Similarity=0.082 Sum_probs=170.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...+++..|++++.++.+ +++.+|+++|++++++.+ .+|+ ++|++|.+.|+++|.++
T Consensus 76 gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~---~~n~~G~~~~l~~i~~l 146 (373)
T 3frk_A 76 GDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKT------KAII---AVHLYGQPADMDEIKRI 146 (373)
T ss_dssp TCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTE------EEEE---EECCTTCCCCHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCC------eEEE---EECCCcCcccHHHHHHH
Confidence 4468888999999999999999999999987 678999999999987644 3554 45689999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeec--cccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFN--AHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++++|++|+.+...... ..+ ...|+++++ .||+++++...|+++.++........ .+...+..
T Consensus 147 ~~~~~~~li~D~a~~~g~~~~~~----~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~----~~~~~g~~ 217 (373)
T 3frk_A 147 AKKYNLKLIEDAAQAHGSLYKGM----KVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIK----ALSNYGSE 217 (373)
T ss_dssp HHHHTCEEEEECTTCTTCEETTE----ETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHH----HHHBTTCS
T ss_pred HHHcCCEEEEECCcccCCEECCE----ecc-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHH----HHHhcCcc
Confidence 99999999999999865542211 011 124777777 77999763445666665543332211 00000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..| . ....+..+....+.+++.....++++++.++..++++++.
T Consensus 218 ------~~~----------------------------~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~ 261 (373)
T 3frk_A 218 ------KKY----------------------------H--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYI 261 (373)
T ss_dssp ------BTT----------------------------B--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ------cCC----------------------------c--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0000001112344455555556778889999999999999
Q ss_pred HHhcCCCCeEEeCCCC---ceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------------C---------C
Q psy3048 267 DLVEKDDRFELVCPPS---MGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------------Q---------G 319 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------------~---------~ 319 (367)
+.|++++ +.+...+. .+...|.+... ...++.+.|.++|+. +..... . .
T Consensus 262 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (373)
T 3frk_A 262 AGINNPN-VIIPVEADYAKHVWYTFVIRSE--KRDELQKYLNNNGIG-TLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIA 337 (373)
T ss_dssp HHCCCTT-EECCCCCTTEECCCSSEEEEES--SHHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHH
T ss_pred HHhccCc-eEeccCCCCCceeeEEEEEEeC--CHHHHHHHHHHCCCC-cccCcCCccccChHHHhcCCCCCCCHHHHHHH
Confidence 9999986 76543221 12222322221 256888999988843 331110 0 0
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
...+|++ .++++|++|||+++++|++...+
T Consensus 338 ~~~lrl~-~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 338 NEILSIP-IWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHEEEEC-CCTTCCHHHHHHHHHHHHTCC--
T ss_pred hCEEEcc-CCCCCCHHHHHHHHHHHHHHhhh
Confidence 1589995 57899999999999999887544
No 72
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=3.5e-20 Score=189.73 Aligned_cols=278 Identities=13% Similarity=0.048 Sum_probs=181.4
Q ss_pred ceEEEecCCcchhHHHH-HHhCCcceEEEecCCC-----CCcCHHHH-----HHHHHHH-hh--CCCcc-EEEEEecCCC
Q psy3048 30 RLVAYASDQSNSSVEKS-AIIGDVPVRQLRSDDN-----GVLRGDAL-----LTAVKED-LA--KGLIP-CCLVATLGTT 94 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~-~~~~g~~v~~v~~~~~-----~~~d~~~L-----~~~l~~~-~~--~~~~~-~~vv~~~~~t 94 (367)
.-.|++++.+|.|+..+ +...|+++++++.+.+ +.+|+++| ++++++. .+ +...| .+++++++ |
T Consensus 213 GD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n 291 (730)
T 1c4k_A 213 GDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-T 291 (730)
T ss_dssp TCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-C
T ss_pred CCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-C
Confidence 34678899999999998 8889999998876422 45789888 7777653 11 01123 47777776 5
Q ss_pred cccccCChhhHHHHHhhcCcEEEEecccccccccChhhhh-hhCCC--CCcc----eeeeccccccccCCcceeEEEecc
Q psy3048 95 GTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGL--EYVD----SFAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 95 ~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~--~~~D----~~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
++|.+.|+++|+++||+||+++++|+||+++..+.+.... ..... -.+| +++.++||++.+|.++|+++++++
T Consensus 292 ~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~ 371 (730)
T 1c4k_A 292 YDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDS 371 (730)
T ss_dssp TTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECG
T ss_pred CCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecch
Confidence 7999999999999999999999999999865444332220 00001 1346 999999999999989999999775
Q ss_pred hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc-ccHHHHHHHHHHh
Q psy3048 168 NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR-FRALKLWMTLRSY 246 (367)
Q Consensus 168 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 246 (367)
.... ...++.. ..+..... .+. ..+.. ....++.++++.+
T Consensus 372 ~l~g-----~~~~i~~-----------~~~~~~~~----------------------~~~-stsp~~~~iaal~aA~~~l 412 (730)
T 1c4k_A 372 HIKG-----QLRYCDH-----------KHFNNSFN----------------------LFM-STSPFYPMYAALDVNAAMQ 412 (730)
T ss_dssp GGTT-----STTCCCH-----------HHHHHHHH----------------------HHS-CSSCCHHHHHHHHHHHHHH
T ss_pred hhcC-----cccccCH-----------HHHHHHHH----------------------HhC-CCCCcHHHHHHHHHHHHHH
Confidence 3211 0011100 00000000 000 00111 1123444555555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEeCCCC------------------------------------ce---e-
Q psy3048 247 GLKGLQAYLRKHISLAKKFADLVEK-DDRFELVCPPS------------------------------------MG---L- 285 (367)
Q Consensus 247 ~~~g~~~~~~~~~~la~~l~~~L~~-~~g~~~~~~~~------------------------------------~~---~- 285 (367)
..++-.+.+++..+++++++++|++ ++|++++.++. .+ +
T Consensus 413 ~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~id 492 (730)
T 1c4k_A 413 EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVD 492 (730)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEEC
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcccccC
Confidence 5534466778899999999999988 78999865421 00 1
Q ss_pred ---EEEEEcC----------CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 286 ---VCFRLKG----------DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 286 ---v~f~~~~----------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
++|..++ ......++.+.|.++|+ ++... +...+|++ .+..+|++|+++++++|+++.++..
T Consensus 493 p~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI-~v~~~---~~~~ir~~-~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 493 PNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGI-IPEKS---DLNSILFL-MTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp TTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTC-CCSEE---CSSEEEEE-CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCc-EEEEC---CCCeEEEE-eCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 5666632 01235688888988874 33221 34578985 4788899999999999999988764
No 73
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.84 E-value=1.7e-19 Score=170.50 Aligned_cols=250 Identities=9% Similarity=0.039 Sum_probs=173.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.+|.++...++..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.|+++|.++|
T Consensus 108 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~p~nptG~~~~~~~l~~l~ 181 (363)
T 3ffh_A 108 TTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKT------TIVWICNPNNPTGNYIELADIQAFL 181 (363)
T ss_dssp TCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCC------CEEEEeCCCCCcCCCcCHHHHHHHH
Confidence 3456677789999999999999999999998789999999999997654 5888899999999999999999999
Q ss_pred hhc--CcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 110 QEY--NIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 110 ~~~--gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+.+ |+++++|++|+.+.. ..... ....+....++++.+.+|+++ .+.++|+++.+ ++...........
T Consensus 182 ~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~------ 253 (363)
T 3ffh_A 182 DRVPSDVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KEIIRQLNIVRPP------ 253 (363)
T ss_dssp TTSCTTSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HHHHHHHHHTCCS------
T ss_pred HhCCCCcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HHHHHHHHHhCCC------
Confidence 887 999999999986543 10000 000011122466778899986 33445888883 3333322111000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 265 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l 265 (367)
| . ...+....+..+++ ..+.+++..++..++++++
T Consensus 254 ---------~-------------------------------~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l 288 (363)
T 3ffh_A 254 ---------F-------------------------------N---TTSIGQKLAIEAIK--DQAFIGECRTSNANGIKQY 288 (363)
T ss_dssp ---------C-------------------------------C---CBHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHH
T ss_pred ---------C-------------------------------C---CCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 0 0 00011223333343 2356788888999999999
Q ss_pred HHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 266 ADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 266 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
.+.|++++|+++. ++..+.+.++++. ...++.+.|.++|+ .+.++. +....++|+++. +++|+++++++|
T Consensus 289 ~~~l~~~~g~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~gi-~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l 359 (363)
T 3ffh_A 289 EAFAKRFEKVKLY-PANGNFVLIDLGI---EAGTIFSYLEKNGY-ITRSGAALGFPTAVRITIG----KEEDNSAVIALL 359 (363)
T ss_dssp HHHHHHCTTCEEC-CCCSSEEEEECSS---CHHHHHHHHHHTTE-ECEETTTTTCTTEEEEECC----CHHHHHHHHHHH
T ss_pred HHHHhhCCCceEC-CCCCeEEEEECCC---CHHHHHHHHHHCCe-EEEeCccCCCCCeEEEECC----CHHHHHHHHHHH
Confidence 9999997798876 4455667777753 35788899998884 444332 222569999753 799999999999
Q ss_pred HHH
Q psy3048 345 SHQ 347 (367)
Q Consensus 345 ~~~ 347 (367)
+++
T Consensus 360 ~~~ 362 (363)
T 3ffh_A 360 EKL 362 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 74
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.83 E-value=2.7e-19 Score=170.47 Aligned_cols=255 Identities=15% Similarity=0.066 Sum_probs=173.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|+++...|.++..+++..|++++.++. +|+++|++++++..+ ...+|++.+++|++|.+.|+++|.++|
T Consensus 123 gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~ 194 (384)
T 1bs0_A 123 EDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVT 194 (384)
T ss_dssp TCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred CcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHH
Confidence 346677889999999999999999998874 489999999875421 135788888999999999999999999
Q ss_pred hhcCcEEEEeccccccccc-C-hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALL-L-PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~-~-~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+. . .... ...+. ..|+++.+.||+++ |+| |+++.+ ++...........|....
T Consensus 195 ~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~-~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~--- 266 (384)
T 1bs0_A 195 QQHNGWLMVDDAHGTGVIGEQGRGSC-WLQKV-KPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYST--- 266 (384)
T ss_dssp HHTTCEEEEECTTTTTTSSGGGCCHH-HHTTC-CCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSSB---
T ss_pred HHcCcEEEEECCcccceecCCCCchH-HhcCC-CCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcCC---
Confidence 9999999999999765432 0 1111 11121 35899999999997 666 888874 333332111111111000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
.........+.++++.+.....++..++..++++++.+
T Consensus 267 ------------------------------------------~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 304 (384)
T 1bs0_A 267 ------------------------------------------SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRA 304 (384)
T ss_dssp ------------------------------------------CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 00001122334445543222557788889999999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++ |+++. ++..+++.+.++. .....++.+.|.++|+ .+.+... .+..++|+++ ...++++|+++++++
T Consensus 305 ~L~~~-g~~~~-~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~~Ri~~-~~~~~~~~i~~~~~~ 379 (384)
T 1bs0_A 305 GVQDL-PFTLA-DSCSAIQPLIVGD-NSRALQLAEKLRQQGC-WVTAIRPPTVPAGTARLRLTL-TAAHEMQDIDRLLEV 379 (384)
T ss_dssp HHTTS-SCEEC-SCCSSBCCEEEES-HHHHHHHHHHHHHTTE-ECCEECTTSSCTTCEEECCBC-CTTCCHHHHHHHHHH
T ss_pred HHHhc-CCccc-CCCCCEEEEEeCC-HHHHHHHHHHHHHCCc-EEEeecCCCCCCCCceEEEEE-cCCCCHHHHHHHHHH
Confidence 99997 78775 3445566666653 3346689999998874 4433322 2347999965 567789999999999
Q ss_pred HHHH
Q psy3048 344 ISHQ 347 (367)
Q Consensus 344 l~~~ 347 (367)
|+++
T Consensus 380 l~~~ 383 (384)
T 1bs0_A 380 LHGN 383 (384)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9875
No 75
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.83 E-value=5e-20 Score=175.68 Aligned_cols=260 Identities=12% Similarity=0.066 Sum_probs=175.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--C--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CCh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--D--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl 102 (367)
.-.|+++..+|.++...++..|++++.++.+ + ++.+|+++|++++++ + .+|++++++|++|.+ +++
T Consensus 114 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l 186 (391)
T 4dq6_A 114 NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-V------KLFILCNPHNPVGRVWTKDEL 186 (391)
T ss_dssp TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-E------EEEEEESSBTTTTBCCCHHHH
T ss_pred CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-C------CEEEEECCCCCCCcCcCHHHH
Confidence 3467778899999999999999999999886 2 356999999999977 4 478889999999999 789
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC----CCcceeeeccccccc-cCCcceeEEEecchhhhhhccCC
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
++|+++|++||+++++|++|+.+.+....... +..+ ....+++.+.+|+++ .+.++|+++.+++........
T Consensus 187 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-- 263 (391)
T 4dq6_A 187 KKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDD-- 263 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHH--
T ss_pred HHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHH--
Confidence 99999999999999999999875442110000 0011 011377889999996 445688888765333322110
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
..... .......+....+.+++.. ..+.+++..++
T Consensus 264 --~~~~~------------------------------------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 298 (391)
T 4dq6_A 264 --AFTRI------------------------------------------DIKRNNCFSLVATEASYNN-GESWLESFLEY 298 (391)
T ss_dssp --HHHHT------------------------------------------TCCCCCHHHHHHHHHHHHH-CHHHHHHHHHH
T ss_pred --HHHhh------------------------------------------cCCCCCHHHHHHHHHHHhc-hHHHHHHHHHH
Confidence 00000 0000010112233333433 34557888888
Q ss_pred HHHHHHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-E--CCeeEEEEEecCCCC
Q psy3048 258 HISLAKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-F--QGRPFLRFVVTSPET 332 (367)
Q Consensus 258 ~~~la~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~--~~~~~lRi~~~~~~~ 332 (367)
..++++++.+.|++ +||+.+..+.....+++.++.......++.+.|.++ |+ .+.++. + .+..++|+++. +
T Consensus 299 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRis~~---~ 374 (391)
T 4dq6_A 299 LESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKV-ALNQGNSFGIGGSGYQRINLA---C 374 (391)
T ss_dssp HHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCE-ECEEGGGGCTTCTTEEEEECC---S
T ss_pred HHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCE-EeeCchhhCCCCCCeEEEEEc---C
Confidence 99999999999988 789988755443344466653112367899999988 74 444432 1 23479999764 5
Q ss_pred CHHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQS 348 (367)
Q Consensus 333 ~~edid~li~~l~~~~ 348 (367)
+++|+++++++|++++
T Consensus 375 ~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 375 PRSMLEEALIRIKNAI 390 (391)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7999999999998875
No 76
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.83 E-value=1.5e-19 Score=173.18 Aligned_cols=262 Identities=12% Similarity=0.033 Sum_probs=173.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChh---hHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLE---ELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~---~I~ 106 (367)
-.|++...+|.++...++..|++++.++.++++ +|+++|++++++ .++ .++++++++|++|.+.|.+ +|+
T Consensus 116 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~~~~-----~v~~~~~~~nptG~~~~~~~l~~l~ 189 (397)
T 2zyj_A 116 SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKRERPR-----FLYLIPSFQNPTGGLTPLPARKRLL 189 (397)
T ss_dssp CEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHCCCS-----CEEECCBSCTTTCCBCCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhhcCCe-----EEEECCCCcCCCCCcCCHHHHHHHH
Confidence 456667789999999999999999999987655 999999999976 332 2336788899999997654 899
Q ss_pred HHHhhcCcEEEEecccccccccCh---hhhhhhCCCC---CcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLE---YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~---~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
++|++||+++++|++|+.+.+... .... + +.. .-.+++.+.||+++.+.++|+++.+. +..+........+
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~-~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~-~~~~~l~~~~~~~ 266 (397)
T 2zyj_A 190 QMVMERGLVVVEDDAYRELYFGEARLPSLFE-L-AREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP-EALQKLVQAKQGA 266 (397)
T ss_dssp HHHHHHTCCEEEECTTTTCBCSSCCCCCHHH-H-HHHHTCCCEEEEEESTTTTCGGGCCEEEECCH-HHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEeCCcccccCCCCCCCchhh-h-CcccCCCeEEEEecccccccccceeEEEecCH-HHHHHHHHHHHhh
Confidence 999999999999999987654211 1111 0 000 11477889999998335678888753 3222211000000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
.++ ...+....+..+++....+.+++..++..+
T Consensus 267 --------------------------------------------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 299 (397)
T 2zyj_A 267 --------------------------------------------DLH---TPMLNQMLVHELLKEGFSERLERVRRVYRE 299 (397)
T ss_dssp --------------------------------------------HSS---CCHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred --------------------------------------------cCC---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 000 000111222223332111457777788888
Q ss_pred HHHHHHHHhcC-CC-CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E----CCeeEEEEEecCCCCC
Q psy3048 261 LAKKFADLVEK-DD-RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F----QGRPFLRFVVTSPETN 333 (367)
Q Consensus 261 la~~l~~~L~~-~~-g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~----~~~~~lRi~~~~~~~~ 333 (367)
+++++.+.|++ +| |+++..+.....++++++. .....++.+.|.++|+ .+.++. + .+..++|+++.. . +
T Consensus 300 ~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~g~~f~~~~~~~~~iRis~~~-~-~ 375 (397)
T 2zyj_A 300 KAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK-GLSAEGLFRRALEENV-AFVPGGPFFANGGGENTLRLSYAT-L-D 375 (397)
T ss_dssp HHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST-TCCHHHHHHHHHHTTE-EEEESGGGCTTSCCTTEEEEECSS-S-C
T ss_pred HHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC-CCCHHHHHHHHHHCCC-EEechHHhcCCCCCCCeEEEEcCC-C-C
Confidence 99999999987 57 6887655555667777753 2235689999998984 444432 2 135689997754 3 7
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy3048 334 QCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 334 ~edid~li~~l~~~~~~~~ 352 (367)
++|+++++++|+++++++.
T Consensus 376 ~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 376 REGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
No 77
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.83 E-value=3.6e-19 Score=170.62 Aligned_cols=268 Identities=15% Similarity=0.092 Sum_probs=172.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.+|.+...+++..|++++.+++++++.+|+++|++++++.. ..+.+|++++ ++|...|+++|.++|
T Consensus 72 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~ 145 (394)
T 1o69_A 72 DDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEIC 145 (394)
T ss_dssp TCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHH
T ss_pred CCEEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHH
Confidence 3467788899999999999999999999998789999999999997621 0123666664 799999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
++||+++++|++|+.+..+.+.. ...+..+|+++++.||.+. |.++|+++.++++...........+. ....
T Consensus 146 ~~~~~~li~Dea~~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~-~~~~--- 217 (394)
T 1o69_A 146 KENDIVLIEDAAEALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQAR-ENCL--- 217 (394)
T ss_dssp HHTTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCC-CSSS---
T ss_pred HHcCCEEEEECcCcccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhcc-ccCc---
Confidence 99999999999998443332210 0112346999999999776 67899998865444332211111100 0000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
.+ . ....+.++....+.+++.....+.+++..++..++++++.+.|
T Consensus 218 ----~~-----------------~-------------~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L 263 (394)
T 1o69_A 218 ----HY-----------------E-------------HLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFL 263 (394)
T ss_dssp ----SC-----------------C-------------CSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ----cc-----------------c-------------ccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0 0000000111122222221123446778889999999999999
Q ss_pred cCCCCeEEeCCC-----CceeEEEEEcCC--------------------chHHHHHHHHHhccCcEEEEEeE--------
Q psy3048 270 EKDDRFELVCPP-----SMGLVCFRLKGD--------------------NDLTNQLYERLMSHKQIYIIKAS-------- 316 (367)
Q Consensus 270 ~~~~g~~~~~~~-----~~~~v~f~~~~~--------------------~~~~~~l~~~L~~~g~~~~~~~~-------- 316 (367)
+++ +++..++ .+.++.+.++.. .....++.+.|.++|+. +.+..
T Consensus 264 ~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~-v~~~~~~~~~~p~ 340 (394)
T 1o69_A 264 GEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIE-TRPLWKAMHTQEV 340 (394)
T ss_dssp TTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCC-CBCCCCCGGGCGG
T ss_pred ccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCc-ccccCCccccchh
Confidence 887 6665432 223577777631 12456899999888853 32220
Q ss_pred ECC----e---------eEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 317 FQG----R---------PFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 317 ~~~----~---------~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
+.. . ..+|+ ++++++|++|+++++++|+++.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 341 FKGAKAYLNGNSELFFQKGICL-PSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp GTTCEEEECSHHHHHHHHEEEE-CCCTTCCHHHHHHHHHHHHHHHC
T ss_pred hhccCCCCChHHHHHhcCeEEc-cCCCCCCHHHHHHHHHHHHHHHh
Confidence 000 0 34555 34789999999999999998754
No 78
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.83 E-value=2.5e-19 Score=168.73 Aligned_cols=250 Identities=11% Similarity=-0.004 Sum_probs=174.2
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHH--HHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVK--EDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~--~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
-.|+++..+|.++...++..|++++.++.++++.+|+++|+++++ +.+ .+|++++++|++|.+.|++++.++
T Consensus 93 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~------~~v~l~~p~nptG~~~~~~~l~~l 166 (354)
T 3ly1_A 93 AQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGP------SIVYLVNPNNPTGTITPADVIEPW 166 (354)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSC------EEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCC------CEEEEeCCCCCcCCCcCHHHHHHH
Confidence 456678899999999999999999999998789999999999997 443 578889999999999998888888
Q ss_pred Hhh--cCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 109 CQE--YNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 109 ~~~--~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++. ||+++++|++|+.+.+... ............++++.+.+|+++ .+.++|+++.. +............
T Consensus 167 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~---- 241 (354)
T 3ly1_A 167 IASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-PTVIALMGRYVAG---- 241 (354)
T ss_dssp HHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-HHHHHHHGGGTTC----
T ss_pred HHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-HHHHHHHHHhcCC----
Confidence 887 9999999999986544221 000001111023688889999997 44667888773 3333221110000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~la 262 (367)
+ + ...+...++...+ ..+.+++..++..+++
T Consensus 242 -----------~-------------------------------~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 273 (354)
T 3ly1_A 242 -----------E-------------------------------K------INFSGVDAALASMNDSAFITYSKKSNDVSR 273 (354)
T ss_dssp -----------S-------------------------------C------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -----------C-------------------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 0 0 0012222222222 2356788888899999
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-CCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-QGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~lRi~~~~~~~~~edid~li 341 (367)
+++.+.|+++ |+.+. ++..+.+++.++. ...++.+.|.++|+. +. +.+ ....++|+++. +++|+++++
T Consensus 274 ~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~gi~-v~-g~~~~~~~~iRis~~----~~~~i~~~~ 342 (354)
T 3ly1_A 274 QILLKALEDL-KLPYL-PSEGNFVFHQLVV---PLKDYQTHMADAGVL-IG-RAFPPADNWCRISLG----TPQEMQWVA 342 (354)
T ss_dssp HHHHHHHHHH-TCCBC-CCCSSEEEEECSS---CHHHHHHHHHHTTEE-CC-CCCTTCTTEEEEECC----CHHHHHHHH
T ss_pred HHHHHHHHHC-CCeEC-CCCceEEEEECCC---CHHHHHHHHHHCCEE-Ee-ecCCCCCCEEEEEcC----CHHHHHHHH
Confidence 9999999887 77665 4455567777754 356888889888843 43 322 24679999753 699999999
Q ss_pred HHHHHHHHH
Q psy3048 342 NEISHQSSE 350 (367)
Q Consensus 342 ~~l~~~~~~ 350 (367)
++|++++++
T Consensus 343 ~~l~~~l~~ 351 (354)
T 3ly1_A 343 DTMREFRKK 351 (354)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998764
No 79
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.83 E-value=1.6e-20 Score=183.28 Aligned_cols=252 Identities=13% Similarity=0.046 Sum_probs=167.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec--CCC----CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDN----GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~----~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
+-.|++++.+|.+...++...|++++++++ +++ +.+|+++| +.+.+ .+|++++ +|++|.+.|++
T Consensus 96 gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~~------~~v~~~~-~n~~G~~~~l~ 165 (446)
T 2x3l_A 96 KGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NNDGH------KLVVLTY-PNYYGETFNVE 165 (446)
T ss_dssp SSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------C------CEEEEES-SCTTSCCCCHH
T ss_pred CCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCCCc------eEEEEEC-CCCCeEecCHH
Confidence 456778899999999999999999999998 654 67898888 33333 4777777 56699999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhh-hhccCCccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLT-NTFFTDRVYLK 182 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~-~~~~~~~~yl~ 182 (367)
+|.++|++||+++++|+||++...+.+. ....... .+|+++.++||++.++.|+|++++++.. +. ..+.......
T Consensus 166 ~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~-g~Di~~~S~~K~l~~~~g~g~l~~~~~~-i~~~~~~~~~~~~- 241 (446)
T 2x3l_A 166 EVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY-QADYVVQSFHKTLPALTMGSVLYIHKNA-PYRENIIEYLSYF- 241 (446)
T ss_dssp HHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG-TCSEEEECHHHHSSSCTTCEEEEEETTC-TTHHHHHHHHHHH-
T ss_pred HHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc-CCCEEEECCccccccccccEEEEEcCCc-CCHHHHHHHHHHH-
Confidence 9999999999999999999873222221 1101111 2599999999999999999999996542 11 0000000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. ..++++ ....++.++++.+...|.+++.++..+++
T Consensus 242 ~------~~s~~~--------------------------------------~~~aal~~a~~~l~~~g~~~~~~~~~~l~ 277 (446)
T 2x3l_A 242 Q------TSSPSY--------------------------------------LIMASLESAAQFYKTYDSTLFFAKRAQLI 277 (446)
T ss_dssp S------CSSCCH--------------------------------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred c------CCCchH--------------------------------------HHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 0 001111 11234444555555556566788888999
Q ss_pred HHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHH
Q psy3048 263 KKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWN 342 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~ 342 (367)
++++++ |++++.+.....+++.+++ ....++.+.|.++|+ .+. ..+..++|+++ ..+++++|+ ++++
T Consensus 278 ~~l~~~-----g~~~~~~~~~~~l~i~~~~--~~~~~l~~~L~~~GI-~v~---~~g~~~iRi~~-~~~~t~e~i-~l~~ 344 (446)
T 2x3l_A 278 ECLENK-----GFEMLQVDDPLKLLIKYEG--FTGHDIQNWFMNAHI-YLE---LADDYQALAIL-PLWHHDDTY-LFDS 344 (446)
T ss_dssp HHHHHH-----TCEEEECSSTTEEEEECTT--SCHHHHHHHHHHTTE-EES---EECSSCEEEEC-CCCCTTCCC-CHHH
T ss_pred HHHHHc-----CCEECcCCCCeEEEEEeCC--cCHHHHHHHHHHCCC-EEE---ecCCCEEEEEe-ecCCCHHHH-HHHH
Confidence 998887 6777754333356676653 235678888988874 332 12346899976 567789999 9999
Q ss_pred HHHHHHHHhh
Q psy3048 343 EISHQSSEMN 352 (367)
Q Consensus 343 ~l~~~~~~~~ 352 (367)
+|+++.+++.
T Consensus 345 aL~~~~~~~~ 354 (446)
T 2x3l_A 345 LLRKIEDMIL 354 (446)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhhc
Confidence 9999977653
No 80
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.83 E-value=6.2e-19 Score=171.08 Aligned_cols=270 Identities=11% Similarity=0.051 Sum_probs=178.9
Q ss_pred ceEEEecCCcchhHHHHHH-hCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAI-IGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~-~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
.-.|++++.+|.++..++. ..|++++.+++++ ++.+|+++|++++++..+++..+.+|++++++|++|.+.| ++
T Consensus 135 gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 214 (435)
T 3piu_A 135 GEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 214 (435)
T ss_dssp TCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHH
Confidence 3467778889999998888 6899999999864 4678999999999886544445678899999999999854 58
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhh---hhhhCC--C------CCcceeeeccccccc-cCCcceeEEEecchhhh
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEY---AHLKRG--L------EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLT 171 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~---~~~~~~--~------~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~ 171 (367)
+|+++|++||+++++|++|+.+.+..... ...... + ....+++.+.+|+++ .+..+|+++..++....
T Consensus 215 ~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~ 294 (435)
T 3piu_A 215 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVA 294 (435)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHH
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHH
Confidence 88899999999999999998754432110 000010 0 111377889999997 44568888875543322
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh--HH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG--LK 249 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~ 249 (367)
. +.....+.. ........+.+.+.... .+
T Consensus 295 ~-~~~~~~~~~------------------------------------------------~~~~~~~~~~~~l~~~~~~~~ 325 (435)
T 3piu_A 295 A-ATKMSSFGL------------------------------------------------VSSQTQHLLSAMLSDKKLTKN 325 (435)
T ss_dssp H-HHHHGGGSC------------------------------------------------CCHHHHHHHHHHHHCHHHHHH
T ss_pred H-HHHHhhcCC------------------------------------------------CCHHHHHHHHHHhcChHHHHH
Confidence 1 100000000 00011112222232211 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-----hHHHHHHHHHhcc-CcEEEEEeEE---CCe
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN-----DLTNQLYERLMSH-KQIYIIKASF---QGR 320 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----~~~~~l~~~L~~~-g~~~~~~~~~---~~~ 320 (367)
.+++..++..++.+++.+.|+++ |+++..+.....+.+.++... ....++.++|.++ | +.+.++.. .++
T Consensus 326 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~ 403 (435)
T 3piu_A 326 YIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVH-LNISPGSSCHCTEP 403 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSC-EECEEGGGGTCSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCC-EEEeCCcccCCCCC
Confidence 45677778889999999999987 888765544456677665310 0345788888877 6 44544322 346
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.++|+++. .. +++|+++++++|+++++++.
T Consensus 404 ~~iRi~~~-~~-~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 404 GWFRVCFA-NL-PERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp TEEEEECS-SS-CHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEee-CC-CHHHHHHHHHHHHHHHHHHh
Confidence 79999763 33 79999999999999988754
No 81
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.83 E-value=2.7e-19 Score=173.22 Aligned_cols=266 Identities=13% Similarity=0.059 Sum_probs=174.6
Q ss_pred eEEEecCCcchhHHHHHH-hCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 31 LVAYASDQSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~-~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
-.|++++.+|.++...+. ..|++++.++.+ +++.+|+++|++++++...++..+.+|++++++|++|.+.| +++
T Consensus 133 d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 212 (428)
T 1iay_A 133 DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKS 212 (428)
T ss_dssp CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHH
Confidence 467777888998877554 689999999886 35689999999999865333333567888999999999988 999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh---hhhhhhCC-----CCCcc--eeeeccccccccC-CcceeEEEecchhhhhh
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRG-----LEYVD--SFAFNAHKWLLTN-HDCSAMWVKNANHLTNT 173 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~~~-----~~~~D--~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~ 173 (367)
|+++|++||+++++|++|+.+.+... ........ . ..| +++.+.||+++.| ..+|+++..++......
T Consensus 213 l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~ 291 (428)
T 1iay_A 213 VLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYC-NKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCA 291 (428)
T ss_dssp HHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTS-CTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHH
T ss_pred HHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccC-CCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHH
Confidence 99999999999999999987544211 11111111 0 136 7889999999643 44688887544433221
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHH
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGL 251 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~ 251 (367)
... ..+ + + ...+....+..++... ..+.+
T Consensus 292 ~~~-~~~--------------~-------------------------------~---~~~~~~~a~~~~l~~~~~~~~~~ 322 (428)
T 1iay_A 292 RKM-SSF--------------G-------------------------------L---VSTQTQYFLAAMLSDEKFVDNFL 322 (428)
T ss_dssp HHH-HTT--------------S-------------------------------C---CCHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHH-Hhc--------------c-------------------------------c---CCHHHHHHHHHHhcChHHHHHHH
Confidence 100 000 0 0 0001111222222211 12356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-----hHHHHHHHHHhcc-CcEEEEEeE-EC--CeeE
Q psy3048 252 QAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN-----DLTNQLYERLMSH-KQIYIIKAS-FQ--GRPF 322 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----~~~~~l~~~L~~~-g~~~~~~~~-~~--~~~~ 322 (367)
++..++..++++++.+.|+++ |+++..+...+.++++++... ....++.+.|.++ |+ .+.+.. +. +..+
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi-~v~~~~~~~~~~~~~ 400 (428)
T 1iay_A 323 RESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKL-NVSPGSSFECQEPGW 400 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCE-ECEEGGGGTCSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCE-EEeCchhhCCCCCCE
Confidence 777888889999999999987 777654434556677775311 2345788888877 74 444432 11 2468
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+|+++. .++++|+++++++|++++++
T Consensus 401 iRis~~--~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 401 FRVCFA--NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp EEEECS--SSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEe--cCCHHHHHHHHHHHHHHHhc
Confidence 999764 46899999999999998764
No 82
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.83 E-value=1.2e-19 Score=175.85 Aligned_cols=266 Identities=12% Similarity=0.012 Sum_probs=181.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|..+...++..|++++.++.+ .++.+|+++|++++++.+ .+|++++++|++|.+.| +++
T Consensus 142 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~~ 215 (427)
T 3dyd_A 142 GQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKT------ACLIVNNPSNPCGSVFSKRHLQK 215 (427)
T ss_dssp TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCC------CEEEEECCCCCCCCCCCHHHHHH
Confidence 3467777889999999999999999999885 467899999999986644 47888999999999999 999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhh-hhCCCCCcceeeeccccccccC-CcceeEEEecch-----hhhhhccCC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNAN-----HLTNTFFTD 177 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~-----~~~~~~~~~ 177 (367)
|+++|++||+++++|++|+.+.+....... ...+.....+++.+.+|.++.| ..+|+++.++.. .+...+.
T Consensus 216 i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~-- 293 (427)
T 3dyd_A 216 ILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLV-- 293 (427)
T ss_dssp HHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHH--
T ss_pred HHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHH--
Confidence 999999999999999999876543211100 0011111125566899986543 568998887531 1111000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
.+... ......+.+..+..++.....+.+++..++
T Consensus 294 -~~~~~--------------------------------------------~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~ 328 (427)
T 3dyd_A 294 -KLSQR--------------------------------------------ILGPCTIVQGALKSILCRTPGEFYHNTLSF 328 (427)
T ss_dssp -HHHHH--------------------------------------------HCCSCHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred -HHHhc--------------------------------------------cCCCCHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 00000 000011222344444554456778888899
Q ss_pred HHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC----chHHHHHHHHHh-ccCcEEEEEe-EECCeeEEEEEecCCC
Q psy3048 258 HISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD----NDLTNQLYERLM-SHKQIYIIKA-SFQGRPFLRFVVTSPE 331 (367)
Q Consensus 258 ~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~----~~~~~~l~~~L~-~~g~~~~~~~-~~~~~~~lRi~~~~~~ 331 (367)
..++++++.+.|+++||+.+..+.....+.+.++.. .....++.++|. ++|+ ++.++ .+..+.++|+++.
T Consensus 329 ~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV-~v~~g~~~~~~~~iRis~~--- 404 (427)
T 3dyd_A 329 LKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSV-HCLPATCFEYPNFIRVVIT--- 404 (427)
T ss_dssp HHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCE-ECEEGGGGTCTTEEEEESC---
T ss_pred HHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCE-EEECCcccCCCCeEEEEEC---
Confidence 999999999999999999887665555666666420 123467888886 5664 44443 3334579999753
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy3048 332 TNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~ 352 (367)
++++++++++++|+++++++.
T Consensus 405 ~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 405 VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp SCHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 589999999999999988764
No 83
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.83 E-value=1.2e-19 Score=174.84 Aligned_cols=269 Identities=11% Similarity=0.005 Sum_probs=180.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.++ ++.+|+++|++++++.+ .++++++++|++|.+.| +++
T Consensus 128 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~~ 201 (416)
T 1bw0_A 128 GDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKT------KLLIVTNPSNPCGSNFSRKHVED 201 (416)
T ss_dssp TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCC------eEEEEeCCCCCCCcccCHHHHHH
Confidence 34567777899999999999999999998853 47799999999987544 47888889999999988 999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh----hhhhhhCCCCC--cceeeeccccccccC-CcceeEEEecc-hhhhhhccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP----EYAHLKRGLEY--VDSFAFNAHKWLLTN-HDCSAMWVKNA-NHLTNTFFT 176 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~----~~~~~~~~~~~--~D~~~~~~hK~l~~p-~g~g~l~~~~~-~~~~~~~~~ 176 (367)
|+++|++||+++++|++|+.+.+... ... .+..+.. .++++.+.+|+++.| ..+|+++.+++ ..+......
T Consensus 202 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~ 280 (416)
T 1bw0_A 202 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT-SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEG 280 (416)
T ss_dssp HHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC-CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHH
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCCCCcc-CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHH
Confidence 99999999999999999987543221 110 1111211 146677899998654 45889888664 222211000
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
...+. .. .++ ...+....+..+++....+++++..+
T Consensus 281 ~~~~~-~~----------------------------------------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~ 316 (416)
T 1bw0_A 281 LKRVG-ML----------------------------------------VCG---PCTVVQAALGEALLNTPQEHLDQIVA 316 (416)
T ss_dssp HHHHH-HH----------------------------------------HTC---SCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred HHHHh-cc----------------------------------------ccC---CCcHHHHHHHHHHhcccHHHHHHHHH
Confidence 00000 00 000 01112233344454434677888999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC----chHHHHHHHHHh-ccCcEEEEEe-EECCeeEEEEEecCC
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD----NDLTNQLYERLM-SHKQIYIIKA-SFQGRPFLRFVVTSP 330 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~----~~~~~~l~~~L~-~~g~~~~~~~-~~~~~~~lRi~~~~~ 330 (367)
+..++++++.+.|+++||+.+..+.....+.++++.. .....++.+.|. ++|+ .+.++ .+....++|+++.
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~f~~~~~iRis~~-- 393 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENV-QVLPGTIFHAPGFTRLTTT-- 393 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCE-ECEEGGGGTCTTEEEEECC--
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCE-EEecccccCCCCeEEEEec--
Confidence 9999999999999998899876554455566666421 123567888875 6774 44433 2223468999763
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~~ 353 (367)
+++++++.+++.|++++++..+
T Consensus 394 -~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 394 -RPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHBC
T ss_pred -CCHHHHHHHHHHHHHHHHHhhc
Confidence 5799999999999999887543
No 84
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.83 E-value=1e-19 Score=176.35 Aligned_cols=275 Identities=11% Similarity=0.035 Sum_probs=175.6
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHH-HHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAV-KEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l-~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|+++..+|.++..+++..|++++.++.+ +++.+|+++|++++ ++.+ .+|++++++|++|.+.| +++|+
T Consensus 135 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~------~~v~l~~p~nptG~~~~~~~l~~i~ 208 (437)
T 3g0t_A 135 GTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQF------CSIIYSNPNNPTWQCMTDEELRIIG 208 (437)
T ss_dssp CEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCC------CEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCc------eEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 57777899999999999999999999985 45679999999999 4433 47778899999999976 77789
Q ss_pred HHHhhcCcEEEEecccccccccChhhh-------hhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhh-hhccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYA-------HLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLT-NTFFTD 177 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~-~~~~~~ 177 (367)
++|++||+++++|++|+.+.+...... ..+.+....++++.+.+|+++ .+.++|+++.++ .... ......
T Consensus 209 ~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~ 287 (437)
T 3g0t_A 209 ELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG-KLYEREYPDLE 287 (437)
T ss_dssp HHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH-HHHHCBCGGGH
T ss_pred HHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH-HHhhhhhhccc
Confidence 999999999999999986443210000 011111234688899999997 446688888753 2222 100000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH---HHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG---LQAY 254 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g---~~~~ 254 (367)
..+..... .+ .++... ..........+....+..++.. ...+ +++.
T Consensus 288 ~~~~~~~~--------~~---~~~~~~-------------------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 336 (437)
T 3g0t_A 288 ESFGRLRF--------GE---ALSSSA-------------------LYALSSGATHSAQWGMAAMLKA-CNDGEYNFRDS 336 (437)
T ss_dssp HHHSCSBH--------HH---HHHTTH-------------------HHHHHSSSCHHHHHHHHHHHHH-HHTTSCCHHHH
T ss_pred ccccccch--------hH---HHHHHH-------------------HhhhcCCCCHHHHHHHHHHHhC-cHhHHHHHHHH
Confidence 00000000 00 000000 0000000111112222233332 1122 7888
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEe------CC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECC---eeEEE
Q psy3048 255 LRKHISLAKKFADLVEKDDRFELV------CP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQG---RPFLR 324 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~g~~~~------~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---~~~lR 324 (367)
.++..++++++.+.|+++ |+++. .+ .....+++.+++ ....++.++|.++|+ .+.+....+ ..++|
T Consensus 337 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi-~v~~~~~~~~~~~~~iR 412 (437)
T 3g0t_A 337 VIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG--MDSSKLIEKFVRYGM-CAITLKTTGSKRNEAMR 412 (437)
T ss_dssp HHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETT--CCHHHHHHHHHHTTE-ECEESTTTTCCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCC--CCHHHHHHHHHHcCe-EEeeccccCCCCCCEEE
Confidence 899999999999999998 89887 34 455667777763 236789999998884 444432211 25799
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
++++ +++++|+++++++|++++++
T Consensus 413 is~~--~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 413 ICTS--LLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EECS--SSCGGGHHHHHHHHHHHHHH
T ss_pred EEEe--cCCHHHHHHHHHHHHHHHhc
Confidence 9764 44899999999999998764
No 85
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.83 E-value=6.1e-20 Score=177.52 Aligned_cols=263 Identities=13% Similarity=0.072 Sum_probs=177.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCccccc---CCh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAF---DNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i---~dl 102 (367)
.-.|++...+|.++..++...|.+++.++.+ .++.+|+++|++++++ .+ .+|++++++|++|.+ +++
T Consensus 143 gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~------~~vil~~p~nptG~~~~~~~l 216 (421)
T 3l8a_A 143 GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNV------KIYLLCSPHNPGGRVWDNDDL 216 (421)
T ss_dssp EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTE------EEEEEESSBTTTTBCCCHHHH
T ss_pred CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCC------eEEEECCCCCCCCCcCCHHHH
Confidence 3467778889999999999999999999874 2357899999999973 44 578889999999998 789
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChh---hhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
++|+++|++||+++++|++|+.+.+.... +.....+....++.+.+.+|+++ .+.++|+++.++++.......
T Consensus 217 ~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~--- 293 (421)
T 3l8a_A 217 IKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQY--- 293 (421)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHH---
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHH---
Confidence 99999999999999999999875442211 10000011123577888999997 446678888864443322100
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKH 258 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 258 (367)
.... +....++.+...++.+++.. +.+.+++..++.
T Consensus 294 -~~~~------------------------------------------~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~ 329 (421)
T 3l8a_A 294 -RQLA------------------------------------------NNQHEVPTVGMIATQAAFQY-GKPWLEELKTVI 329 (421)
T ss_dssp -HHHH------------------------------------------TTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred -HHHh------------------------------------------cccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHH
Confidence 0000 00000111222333444443 456678888899
Q ss_pred HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---CCeeEEEEEecCCCCCH
Q psy3048 259 ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 259 ~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~lRi~~~~~~~~~ 334 (367)
.++.+++.+.|+++|++.+..+.....+++.++.......++.++|.++ | +.+.++.. .+..++|+++. +++
T Consensus 330 ~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~g-i~v~~g~~f~~~~~~~iRi~~~---~~~ 405 (421)
T 3l8a_A 330 EGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAK-VVLNDGAHFGKEGKYFARLNVA---TPK 405 (421)
T ss_dssp HHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTC-EECEEGGGGCGGGTTEEEEECC---SCH
T ss_pred HHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCC-EEEECchhhCCCCCCEEEEEec---CCH
Confidence 9999999999988788988765544444466643112345788888755 6 44544322 23579999764 479
Q ss_pred HHHHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQSS 349 (367)
Q Consensus 335 edid~li~~l~~~~~ 349 (367)
++++++++.|+++++
T Consensus 406 ~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 406 NTVQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 86
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.83 E-value=2.3e-19 Score=173.29 Aligned_cols=281 Identities=10% Similarity=0.021 Sum_probs=176.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...++...|++++.+++++ ++.+|+++|++++++.+ .+|+++ +++|.+.|+++|.++
T Consensus 82 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~~~---~~~G~~~~~~~i~~~ 152 (418)
T 2c81_A 82 GDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKT------KAIIPV---HLFGSMANMDEINEI 152 (418)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTE------EEECCB---CCTTCCCCHHHHHHH
T ss_pred cCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCC------eEEEEe---CCcCCcccHHHHHHH
Confidence 34677888999999999999999999999975 78999999999987544 355544 478999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
|++||+++++|++|+.+...... . ......++++++++||+++.+ .+|+++.+++.......... .+-.......
T Consensus 153 ~~~~~~~li~D~a~~~~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~-~~~~~~~~~~ 227 (418)
T 2c81_A 153 AQEHNLFVIEDCAQSHGSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLR-ADSRVYCDDS 227 (418)
T ss_dssp HHHTTCEEEEECTTCTTCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHH-BTTEEECSCG
T ss_pred HHHCCCEEEEECcccccCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHH-HhCccccccc
Confidence 99999999999999877522111 0 111223467777779999873 66666664444332221000 0000000000
Q ss_pred CCCCCCchhhhhhcccCCCcchhcc-CCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLN-CSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
......| .. .+. + .......+.. .+.+++.....++++++.++..++++++.+
T Consensus 228 ~~~~~~~----------------~~~~~~-~-------~~~g~~~~~~--~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~ 281 (418)
T 2c81_A 228 SELMHGD----------------MQLVKK-G-------DIQGSNYCLS--EFQSAILLDQLQELDDKNAIREKNAMFLND 281 (418)
T ss_dssp GGCCTTC----------------BSEEEC-C-------SSCCCBCCCC--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cccccch----------------hhcccc-c-------cccCcCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001 00 000 0 0000011111 222233333445678888899999999999
Q ss_pred HhcCCCCeEEeCCCCc------eeEEEEEcC---CchHHHHHHHHHhcc-CcEE--EEEeEEC-----------------
Q psy3048 268 LVEKDDRFELVCPPSM------GLVCFRLKG---DNDLTNQLYERLMSH-KQIY--IIKASFQ----------------- 318 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~------~~v~f~~~~---~~~~~~~l~~~L~~~-g~~~--~~~~~~~----------------- 318 (367)
.|++++|+++..++.. .++.+.++. ......++.+.|.++ |+.. +.+....
T Consensus 282 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~ 361 (418)
T 2c81_A 282 ALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLK 361 (418)
T ss_dssp HHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCH
T ss_pred HhccCCCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccc
Confidence 9999999998754321 245567652 012356888999888 8540 3322100
Q ss_pred -----------C---------eeEEEEEecCCCC-CHHHHHHHHHHHHHHHHHh
Q psy3048 319 -----------G---------RPFLRFVVTSPET-NQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 319 -----------~---------~~~lRi~~~~~~~-~~edid~li~~l~~~~~~~ 351 (367)
+ ...+|+++ ++++ |++||++++++|+++++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 362 SVRKTEAYWRGLHYPVSERASGQSIVIHH-AILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HHHCCHHHHHTCCCHHHHHHHHHEEEEEG-GGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccCCChHHHHHHhCEEEecC-CccCCCHHHHHHHHHHHHHHHHhh
Confidence 1 25899964 6788 9999999999999998764
No 87
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=5.3e-20 Score=177.18 Aligned_cols=260 Identities=9% Similarity=-0.017 Sum_probs=176.5
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.++ ++.+ +++|++++++.+ .+|++++++|++|.+. ++++
T Consensus 126 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~ 198 (409)
T 2gb3_A 126 GDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERT------KGIVLSNPCNPTGVVYGKDEMRY 198 (409)
T ss_dssp TCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCC------eEEEECCCCCCCCCCcCHHHHHH
Confidence 34677788899999999999999999999864 4455 888988886543 5778889999999984 5899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
|.++|++||+++++|++|+.+.+....... +.++...|+++.+.||+++.| ..+|+++.++++...........+
T Consensus 199 i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~--- 274 (409)
T 2gb3_A 199 LVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGR--- 274 (409)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHS---
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhcc---
Confidence 999999999999999999876542211111 223334589999999999633 348888876523332211000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. ....+....+.++++. +.+++++..++..++++
T Consensus 275 -------------------------------------------~--~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~ 308 (409)
T 2gb3_A 275 -------------------------------------------L--APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVE 308 (409)
T ss_dssp -------------------------------------------C--CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------C--CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHH
Confidence 0 0000111223333322 45678888888999999
Q ss_pred HHHHHhcCCCCeEE-eCCCCceeEEEEEcCCchHHHHHHHHHhcc------CcEEEEEeE-E-----CCeeEEEEEecCC
Q psy3048 264 KFADLVEKDDRFEL-VCPPSMGLVCFRLKGDNDLTNQLYERLMSH------KQIYIIKAS-F-----QGRPFLRFVVTSP 330 (367)
Q Consensus 264 ~l~~~L~~~~g~~~-~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~------g~~~~~~~~-~-----~~~~~lRi~~~~~ 330 (367)
++.+.|+++ |+++ ..+.....+.+++++ ....++.+.|.++ |+ .+.+.. + .+..++|+++.
T Consensus 309 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~~gi-~v~~g~~f~~~~~~~~~~iRis~~-- 382 (409)
T 2gb3_A 309 TVLKKLEEH-GLKRFTKPSGAFYITAELPV--EDAEEFARWMLTDFNMDGETT-MVAPLRGFYLTPGLGKKEIRIACV-- 382 (409)
T ss_dssp HHHHHHHHT-TCCCBCCCSBSSEEEEECSS--SCHHHHHHHHHHSCCBTTEEE-ECEEGGGGCSSTTTTSSEEEEECC--
T ss_pred HHHHHHHHc-CceeeeCCCeeEEEEEEeCC--CCHHHHHHHHHhccccccCcE-EEeCchHhCCCCCCCCCEEEEEeC--
Confidence 999999987 8877 443333344446642 2356888888877 74 444432 1 13579999754
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~~ 353 (367)
++++|+++++++|+++++++..
T Consensus 383 -~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 383 -LEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHHHHHHHhhh
Confidence 6899999999999999887654
No 88
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.83 E-value=8.8e-20 Score=175.20 Aligned_cols=267 Identities=16% Similarity=0.096 Sum_probs=173.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEE-EEecCCCcccccCChh---hHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL-VATLGTTGTCAFDNLE---ELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~v-v~~~~~t~~G~i~dl~---~I~ 106 (367)
-.|++++.+|.++...++..|++++.++.++++ +|+++|+++++.....+..+.+| ++.+++|++|.+.|++ +|+
T Consensus 123 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~ 201 (407)
T 2zc0_A 123 DVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALL 201 (407)
T ss_dssp CEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 456677889999999999999999999987655 99999999997321111123454 5778899999998887 999
Q ss_pred HHHhhcCcEEEEecccccccccChh---hhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++||+++++|++|+.+.+.... ... + +....++++.+.+|+++.+..+|+++.+ ++...........+
T Consensus 202 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~--- 275 (407)
T 2zc0_A 202 EIASKYDLLIIEDTAYNFMRYEGGDIVPLKA-L-DNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEILKKVLMQKQPI--- 275 (407)
T ss_dssp HHHHHHTCEEEEECTTTTSBSSCSSCCCGGG-G-CSSCCEEEEEESTTTTCTTSCCEEEECC-HHHHHHHHHHHTTT---
T ss_pred HHHHHcCCEEEEECCCcccccCCCCCCChhh-c-CCCCCEEEEcccccccCCCcceEEEecC-HHHHHHHHHHHHhh---
Confidence 9999999999999999876542211 111 1 1111256777889999833358888875 33332211000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-H-HHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-L-KGLQAYLRKHISL 261 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~g~~~~~~~~~~l 261 (367)
.+ . +..+....+..+++... . +.+++..++..++
T Consensus 276 ----------~~-------------------------------~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 311 (407)
T 2zc0_A 276 ----------DF-------------------------------C---APAISQYIALEYLKRGYFEKYHLEGALLGYKEK 311 (407)
T ss_dssp ----------TS-------------------------------S---SCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHH
T ss_pred ----------cC-------------------------------C---CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 00 0 00011122233333221 2 4566777788889
Q ss_pred HHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeE-E----CCeeEEEEEecCCCCCH
Q psy3048 262 AKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKAS-F----QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 262 a~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~----~~~~~lRi~~~~~~~~~ 334 (367)
++++.+.|++ .+++++..+.....+.++++. .....++.+.|.++ |+ .+.++. + .+..++|+++... ++
T Consensus 312 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi-~v~~g~~~~~~~~~~~~iRis~~~~--~~ 387 (407)
T 2zc0_A 312 RDIMLKALENHLPNAEFTKPIAGMFVMFFLPE-GADGISFANELMEREGV-VVVPGKPFYTDESGKNAIRLNFSRP--SK 387 (407)
T ss_dssp HHHHHHHHHHHCTTSCBCCCSBSSEEEEECST-TCCHHHHHHHHHHHTCE-ECBCSGGGCSSSCCTTEEEEECSSS--CT
T ss_pred HHHHHHHHHHhCCCCEEecCCCcEEEEEEcCC-CCCHHHHHHHHHHhCCe-EEECchhccCCCCCCCeEEEEeCCC--CH
Confidence 9999999977 577776555445567777753 22356888999888 74 443321 1 1346899976433 79
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy3048 335 CDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 335 edid~li~~l~~~~~~~~ 352 (367)
+|+++++++|+++++++.
T Consensus 388 ~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 388 EEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988763
No 89
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.82 E-value=1e-19 Score=173.74 Aligned_cols=262 Identities=11% Similarity=0.026 Sum_probs=174.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+. ++++
T Consensus 111 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~~~~l~~ 184 (389)
T 1gd9_A 111 GEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT------RALIINSPCNPTGAVLTKKDLEE 184 (389)
T ss_dssp TCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCc------eEEEEECCCCCCCcCCCHHHHHH
Confidence 44677788899999999999999999999864 57899999999986543 4777889999999986 5999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhh-h-hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEY-A-HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+..... . ..+.+....|+++.+.||+++.| ..+|+++.++ ........ ..
T Consensus 185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~----~~ 259 (389)
T 1gd9_A 185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WIIERMVK----FQ 259 (389)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHH----HH
T ss_pred HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHHHHHHH----HH
Confidence 9999999999999999998765532100 0 01112234589999999998633 3478888753 32222110 00
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH--HHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK--GLQAYLRKHI 259 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~~ 259 (367)
... .+ + ...+....+..+++. +.. +++++.++..
T Consensus 260 ~~~---------~~-------------------------------~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~ 295 (389)
T 1gd9_A 260 MYN---------AT-------------------------------C---PVTFIQYAAAKALKD-ERSWKAVEEMRKEYD 295 (389)
T ss_dssp TTT---------TC-------------------------------S---CCHHHHHHHHHHHTC-HHHHHHHHHHHHHHH
T ss_pred hhh---------cc-------------------------------C---CCHHHHHHHHHHHhC-CCcchHHHHHHHHHH
Confidence 000 00 0 000111222333332 233 6788888899
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeEE-C--CeeEEEEEecCCCCCHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKASF-Q--GRPFLRFVVTSPETNQC 335 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~-~--~~~~lRi~~~~~~~~~e 335 (367)
++++++.+.|+++ |+++..+.....+++.++.......++.+.|. ++|+ .+.++.. . +..++|+++.. +++
T Consensus 296 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRi~~~~---~~~ 370 (389)
T 1gd9_A 296 RRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARV-AVVPGSAFGKAGEGYVRISYAT---AYE 370 (389)
T ss_dssp HHHHHHHHHHHHT-TCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCE-ECEEGGGGCGGGTTBEEEECCS---CHH
T ss_pred HHHHHHHHHHHHc-CCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCE-EEeCchhhCCCCCCeEEEEecC---CHH
Confidence 9999999999987 77765443333445555420123567888887 6774 4444321 1 24689997642 799
Q ss_pred HHHHHHHHHHHHHHHh
Q psy3048 336 DVAFAWNEISHQSSEM 351 (367)
Q Consensus 336 did~li~~l~~~~~~~ 351 (367)
+++++++.|++++++.
T Consensus 371 ~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 371 KLEEAMDRMERVLKER 386 (389)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988753
No 90
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.82 E-value=6.7e-20 Score=175.85 Aligned_cols=261 Identities=12% Similarity=0.030 Sum_probs=173.5
Q ss_pred ceEEEecCCcchhH---HHHHHhCCcceEEEec--C-CCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCCh
Q psy3048 30 RLVAYASDQSNSSV---EKSAIIGDVPVRQLRS--D-DNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~---~~~~~~~g~~v~~v~~--~-~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
+-.|++++.+|.+. ..+++..|..++.++. + +++.+|+++|++++++ .+ .+|+++.+++ |.+.|+
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~------~~v~~~~p~~--~~~~~l 180 (407)
T 2dkj_A 109 GDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRP------KVIVAGASAY--PRFWDF 180 (407)
T ss_dssp TCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCC------SEEEECCSSC--CSCCCH
T ss_pred CCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCC------eEEEEecccc--CCCCCH
Confidence 34677778888776 3444555664445544 3 3688999999999975 33 3666665655 478899
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++|.++|++||+++++|++|+.+....+... ...+..|+++.++||++.+|.+ |+++.++++...........+.
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~- 255 (407)
T 2dkj_A 181 KAFREIADEVGAYLVVDMAHFAGLVAAGLHP---NPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGI- 255 (407)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTCSC---CCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTT-
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCccC---CccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhcccc-
Confidence 9999999999999999999987544322111 1122369999999999988876 8888864443322110000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. .. .......++.+++.....++++++.++..+++
T Consensus 256 ---~----~~--------------------------------------~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (407)
T 2dkj_A 256 ---Q----GG--------------------------------------PLEHVIAGKAVAFFEALQPEFKEYSRLVVENA 290 (407)
T ss_dssp ---C----SS--------------------------------------CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred ---c----CC--------------------------------------CcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 0 00 00011124445566554578899999999999
Q ss_pred HHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-------CCeeEEEEEecCC---C
Q psy3048 263 KKFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-------QGRPFLRFVVTSP---E 331 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-------~~~~~lRi~~~~~---~ 331 (367)
+++.+.|+++ |++++.+ ...+.+++.++.......++.+.|.++|+ .+.+... ....++|++++.. .
T Consensus 291 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 368 (407)
T 2dkj_A 291 KRLAEELARR-GYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGI-TVNKNAIPFDPKPPRVTSGIRIGTPAITTRG 368 (407)
T ss_dssp HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTE-ECEECCCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHHHHHhC-CceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCc-eecCCcCccccccccCCCceeeecccccccC
Confidence 9999999998 8888753 45677778775311135678888888884 4443321 1246899976321 3
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy3048 332 TNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~ 350 (367)
.+++|+++++++|++++++
T Consensus 369 ~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 369 FTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CCGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6899999999999999876
No 91
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=7.8e-20 Score=174.85 Aligned_cols=253 Identities=11% Similarity=0.015 Sum_probs=171.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|.++..+++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.| +++
T Consensus 125 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~ 198 (389)
T 1o4s_A 125 GDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKT------KAVLINSPNNPTGVVYRREFLEG 198 (389)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCc------eEEEEcCCCCCCCCCCCHHHHHH
Confidence 34677788899999999999999999999864 57899999999986543 47778899999999966 999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+... ... .+.+....|+++.+.||+++.| ..+|+++.++ +...........+
T Consensus 199 l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~-~~~~~l~~~~~~~- 275 (389)
T 1o4s_A 199 LVRLAKKRNFYIISDEVYDSLVYTDEFTSIL-DVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE-KVATAVSKIQSHT- 275 (389)
T ss_dssp HHHHHHHHTCEEEEECTTTTSBCSSCCCCHH-HHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCCHh-hcCCCCCcEEEEeechhhcCCcccceEEEEeCH-HHHHHHHHHhhhc-
Confidence 99999999999999999987654211 111 1121224599999999999632 3388888743 3222110000000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
. +. ...+...+++..+.. ++++..++..++
T Consensus 276 ---~----------------------------------------~~------~~~~~~~a~~~~l~~-~~~~~~~~~~~~ 305 (389)
T 1o4s_A 276 ---T----------------------------------------SC------INTVAQYAALKALEV-DNSYMVQTFKER 305 (389)
T ss_dssp ---T----------------------------------------CS------CCHHHHHHHHHHTTC-CCHHHHHHHHHH
T ss_pred ---c----------------------------------------cC------CCHHHHHHHHHHHhc-cHHHHHHHHHHH
Confidence 0 00 011233333333322 367778888899
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
++++.+.|+++ |+++..+.....+++.++ ....++.+.|. ++|+ .+.+. .+...+++|+++. ++++++++
T Consensus 306 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~~~gi-~v~~g~~f~~~~~~Ris~~---~~~~~l~~ 377 (389)
T 1o4s_A 306 KNFVVERLKKM-GVKFVEPEGAFYLFFKVR---GDDVKFCERLLEEKKV-ALVPGSAFLKPGFVRLSFA---TSIERLTE 377 (389)
T ss_dssp HHHHHHHHHHT-TCCCCCCSBSSEEEEECS---SCHHHHHHHHHHHHCE-ECEEGGGGTCTTEEEEECC---SCHHHHHH
T ss_pred HHHHHHHHHhc-CCeeecCCcceEEEEeCC---CCHHHHHHHHHHHCCE-EEeCchhcCCCCeEEEEEe---CCHHHHHH
Confidence 99999999887 777654433334455554 12567888887 6774 44433 2222358999764 37999999
Q ss_pred HHHHHHHHHH
Q psy3048 340 AWNEISHQSS 349 (367)
Q Consensus 340 li~~l~~~~~ 349 (367)
+++.|+++++
T Consensus 378 ~l~~l~~~l~ 387 (389)
T 1o4s_A 378 ALDRIEDFLN 387 (389)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 92
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.82 E-value=2e-19 Score=172.20 Aligned_cols=265 Identities=8% Similarity=-0.063 Sum_probs=176.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-C--CCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCcccccCC---h
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-D--NGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGTCAFDN---L 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~--~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~G~i~d---l 102 (367)
.-.|++++.+|.++..+++..|++++.++.+ + ++.+|+++|+++++ +. +.+|++++++|++|.+.| +
T Consensus 113 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~------~~~v~~~~~~nptG~~~~~~~l 186 (399)
T 1c7n_A 113 GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKN------NKALLFCSPHNPVGRVWKKDEL 186 (399)
T ss_dssp TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTT------EEEEEEESSBTTTTBCCCHHHH
T ss_pred CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCC------CcEEEEcCCCCCCCcCcCHHHH
Confidence 3467778899999999999999999999874 3 24699999999996 33 347778999999999988 9
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC----CCcceeeeccccccccC-CcceeEEEecchhhhhhccCC
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~ 177 (367)
++|+++|++||+++++|++|+.+.+....... +..+ ...++++.+.+|+++.| ..+|+++.++++.........
T Consensus 187 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~ 265 (399)
T 1c7n_A 187 QKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSR 265 (399)
T ss_dssp HHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999875432110000 0111 12257888999999733 457888886544333211000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
..+ +......+....+.+++.. +.+.+++..++
T Consensus 266 ~~~----------------------------------------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 298 (399)
T 1c7n_A 266 DAT----------------------------------------------SGMPFTTLGYKACEICYKE-CGKWLDGCIKV 298 (399)
T ss_dssp HHT----------------------------------------------TCCCCCHHHHHHHHHHHHH-CHHHHHHHHHH
T ss_pred hhc----------------------------------------------ccCCCCHHHHHHHHHHHhC-ChHHHHHHHHH
Confidence 000 0000010112222333432 34567888888
Q ss_pred HHHHHHHHHHHhcC-CCCeEEeCCCCceeE-EEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-EC--CeeEEEEEecCCC
Q psy3048 258 HISLAKKFADLVEK-DDRFELVCPPSMGLV-CFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-FQ--GRPFLRFVVTSPE 331 (367)
Q Consensus 258 ~~~la~~l~~~L~~-~~g~~~~~~~~~~~v-~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~--~~~~lRi~~~~~~ 331 (367)
..++++++.+.|++ +||+.+..+ ..+.+ ++.++.......++.+.|. +.|+. +.++. +. +..++|+++..
T Consensus 299 ~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~iRis~~~-- 374 (399)
T 1c7n_A 299 IDKNQRIVKDFFEVNHPEIKAPLI-EGTYLQWIDFRALKMDHKAMEEFMIHKAQIF-FDEGYIFGDGGIGFERINLAA-- 374 (399)
T ss_dssp HHHHHHHHHHHHHHHCTTSBCCCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCCC-CEEGGGGCGGGTTEEEEECCS--
T ss_pred HHHHHHHHHHHHHhhCCCCeEecC-CceEEEEEEcccCCCCHHHHHHHHHHhCCEE-EeCccccCCCCCCeEEEEecc--
Confidence 99999999999988 788876544 34444 4666531123567888887 67754 43332 21 34689997643
Q ss_pred CCHHHHHHHHHHHHHHHHHhhC
Q psy3048 332 TNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~~ 353 (367)
.+++++++++.|+++++++.+
T Consensus 375 -~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 375 -PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp -CHHHHHHHHHHHHHHHHHHC-
T ss_pred -CHHHHHHHHHHHHHHHHHHHh
Confidence 378999999999999887753
No 93
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=2.9e-19 Score=172.93 Aligned_cols=270 Identities=10% Similarity=-0.006 Sum_probs=176.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhC--CCccEEE-EEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK--GLIPCCL-VATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~--~~~~~~v-v~~~~~t~~G~i~d---l~ 103 (367)
.-.|++.+.+|.++...++..|++++.++.++++ +|+++|++++++..++ +..+.+| ++++++|++|.+.| ++
T Consensus 133 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~ 211 (425)
T 1vp4_A 133 ESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211 (425)
T ss_dssp TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHH
Confidence 3456777889999999999999999999987655 8999999999862110 1113455 57889999999965 67
Q ss_pred hHHHHHhhcCcEEEEecccccccccCh---hhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|+++|++||+++++|++|+.+.+... .... +. ....++++.+.+|+++.+..+|+++.+ ++...........+
T Consensus 212 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~ 288 (425)
T 1vp4_A 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPERVVLLNTFSKVLAPGLRIGMVAGS-KEFIRKIVQAKQSA 288 (425)
T ss_dssp HHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTTTEEEEEESTTTTCGGGCEEEEECC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCCCEEEEeccccccccccceEEEeeC-HHHHHHHHHHhhhh
Confidence 899999999999999999987554211 1111 11 112368888999999833447888875 33332211000000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-hHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-GLKGLQAYLRKHI 259 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~ 259 (367)
.++ .+.+....+..+++.. ..+.+++..++..
T Consensus 289 --------------------------------------------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (425)
T 1vp4_A 289 --------------------------------------------DLC---SPAITHRLAARYLERYDLLEQLKPTIELYR 321 (425)
T ss_dssp --------------------------------------------HSS---CCHHHHHHHHHHHHHSCHHHHTHHHHHHHH
T ss_pred --------------------------------------------cCC---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 000 0111122233333332 1345677777788
Q ss_pred HHHHHHHHHhcCC-C---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E----CCeeEEEEEecCC
Q psy3048 260 SLAKKFADLVEKD-D---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F----QGRPFLRFVVTSP 330 (367)
Q Consensus 260 ~la~~l~~~L~~~-~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~----~~~~~lRi~~~~~ 330 (367)
++++++.+.|++. + |+.+..+.....++++++. .....++.+.|.++|+ .+.++. + .+..++|+++..
T Consensus 322 ~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~g~~f~~~~~~~~~iRis~~~- 398 (425)
T 1vp4_A 322 RKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE-GFDTWEMFEYAKRKKV-FYVPGRVFKVYDEPSPSMRLSFCL- 398 (425)
T ss_dssp HHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCT-TCCTTTTHHHHHHHTE-ECEEGGGGCTTCCCCSEEEEECSS-
T ss_pred HHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCC-CCCHHHHHHHHHHCCC-EEECchhhcCCCCCCCeEEEEeCC-
Confidence 8899999998773 5 6887655555667777753 1224568888888874 444432 2 135699997743
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 331 ETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~~~~~~~ 354 (367)
.+++|+++++++|+++++++.++
T Consensus 399 -~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 399 -PPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhh
Confidence 37999999999999998876543
No 94
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.82 E-value=9.1e-20 Score=173.67 Aligned_cols=257 Identities=12% Similarity=0.027 Sum_probs=171.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC---CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~---~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
+-.|++++.+|.++...++..|++++.++.+ +++.+|+++|++++++.+ .+|++++++|++|.+.| ++
T Consensus 102 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~~~~l~ 175 (381)
T 1v2d_A 102 GDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRT------RALLLNTPMNPTGLVFGERELE 175 (381)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCC------EEEEECCCCCCCCCccCHHHHH
Confidence 3467777889999999999999999999986 568899999999886543 57788899999999865 89
Q ss_pred hHHHHHhhcCcEEEEecccccccccC--hhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLL--PEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~--~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|+++|++||+++++|++|+.+.+.. ..... + ....|+++.+.||+++.| ..+|+++.++ +..+.... ...+
T Consensus 176 ~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~-~--~~~~~~~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~-~~~~ 250 (381)
T 1v2d_A 176 AIARLARAHDLFLISDEVYDELYYGERPRRLRE-F--APERTFTVGSAGKRLEATGYRVGWIVGPK-EFMPRLAG-MRQW 250 (381)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHH-H--CTTTEEEEEEHHHHTTCGGGCCEEEECCT-TTHHHHHH-HHHH
T ss_pred HHHHHHHHcCCEEEEEcCccccccCCCCCCHHH-h--cCCCEEEEeechhhcCCcccceEEEEeCH-HHHHHHHH-HHhh
Confidence 99999999999999999998764410 01111 1 123599999999998633 3388888743 22221100 0000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHI 259 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~ 259 (367)
. .++ ........+..+++... .+++++..++..
T Consensus 251 ~-------------------------------------------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 284 (381)
T 1v2d_A 251 T-------------------------------------------SFS---APTPLQAGVAEALKLARREGFYEALREGYR 284 (381)
T ss_dssp H-------------------------------------------TSS---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred c-------------------------------------------ccC---CCcHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 0 000 00011223334444321 456788888999
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-EC----CeeEEEEEecCCCCCH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQ----GRPFLRFVVTSPETNQ 334 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~----~~~~lRi~~~~~~~~~ 334 (367)
++++++.+.|++. |+++..+.....+++.++.. + +.+.|.++|+ .+.+.. +. +..++|+++.. ++
T Consensus 285 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~----~-~~~~l~~~gi-~v~~g~~~~~~~~~~~~iRi~~~~---~~ 354 (381)
T 1v2d_A 285 RRRDLLAGGLRAM-GLRVYVPEGTYFLMAELPGW----D-AFRLVEEARV-ALIPASAFYLEDPPKDLFRFAFCK---TE 354 (381)
T ss_dssp HHHHHHHHHHHHT-TCCEECCSBSSEEEEECTTC----C-HHHHHHHTCE-ECEEGGGGCSSSCCTTEEEEECCS---CH
T ss_pred HHHHHHHHHHHHC-CCEecCCCcceEEEEecChH----h-HHHHHHhCCE-EEecchHhCCCCCCCCEEEEEeCC---CH
Confidence 9999999999885 88877654444566666542 1 5555666774 444332 11 35699997643 79
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q psy3048 335 CDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 335 edid~li~~l~~~~~~~~~ 353 (367)
+|++++++.|++++++.+.
T Consensus 355 ~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 355 EELHLALERLGRVVNSPRE 373 (381)
T ss_dssp HHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHhhccc
Confidence 9999999999998776543
No 95
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.82 E-value=4.4e-19 Score=167.86 Aligned_cols=249 Identities=11% Similarity=0.032 Sum_probs=174.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEec-CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.++...++..|++++.++. ++++ +|+++|++++++.+ .+|++++++|++|.+.|++++.++
T Consensus 106 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~l 178 (365)
T 3get_A 106 KNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEI------KLIFLCLPNNPLGECLDASEATEF 178 (365)
T ss_dssp TCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTE------EEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCC------CEEEEcCCCCCCCCCcCHHHHHHH
Confidence 346777889999999999999999999998 5678 99999999997554 478889999999999999988888
Q ss_pred Hh--hcCcEEEEecccccccc--c----ChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcc
Q psy3048 109 CQ--EYNIWLHVDAAYAGSAL--L----LPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 109 ~~--~~gi~l~vD~a~~~~~~--~----~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
++ ++|+++++|++|+.+.+ . .+.... . +....++++.+.+|+++ .+.++|+++. +++...........
T Consensus 179 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~ 255 (365)
T 3get_A 179 IKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCEL-I-KEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAP 255 (365)
T ss_dssp HHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHH-H-HHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCT
T ss_pred HHhCCCCcEEEEeCccHHHhcccCCcccccHhHH-h-ccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCC
Confidence 88 77999999999986542 1 111111 0 01123688889999996 4456888887 33333221110000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+ . ...+....+..+++ ..+.+++..++..
T Consensus 256 ---------------~-------------------------------~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~ 284 (365)
T 3get_A 256 ---------------F-------------------------------N---VSNLALKAAVAAMD--DDEFTEKTLENNF 284 (365)
T ss_dssp ---------------T-------------------------------C---SCHHHHHHHHHHHT--CHHHHHHHHHHHH
T ss_pred ---------------C-------------------------------C---cCHHHHHHHHHHhC--CHHHHHHHHHHHH
Confidence 0 0 00011223333333 2366888888999
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
++++++.+.|+++ |+++. ++..+.+.+.++.. ...++.+.|.++|+ .+.++...+..++|+++. +++|+++
T Consensus 285 ~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~--~~~~~~~~l~~~gi-~v~~g~~~~~~~iRis~~----~~~~i~~ 355 (365)
T 3get_A 285 SQMELYKEFAKKH-NIKII-DSYTNFITYFFDEK--NSTDLSEKLLKKGI-IIRNLKSYGLNAIRITIG----TSYENEK 355 (365)
T ss_dssp HHHHHHHHHHHHT-TCEEC-CCSSSEEEEECSSS--CHHHHHHHHHTTTE-ECEECGGGTCSEEEEECC----CHHHHHH
T ss_pred HHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCC--CHHHHHHHHHHCCE-EEEECccCCCCEEEEEcC----CHHHHHH
Confidence 9999999999998 88875 44455677777642 46789999998884 444332222579999753 7999999
Q ss_pred HHHHHHHHH
Q psy3048 340 AWNEISHQS 348 (367)
Q Consensus 340 li~~l~~~~ 348 (367)
++++|++++
T Consensus 356 l~~~l~~~l 364 (365)
T 3get_A 356 FFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 96
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.82 E-value=1.8e-19 Score=171.02 Aligned_cols=258 Identities=10% Similarity=-0.007 Sum_probs=172.5
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~~ 107 (367)
-.|+++..+|.++...++..|++++.++.+++ +|+++|++++++.+ .++++++++|++|.+. ++++|++
T Consensus 106 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~~l~~ 177 (377)
T 3fdb_A 106 SKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQAGA------RSILLCNPYNPLGMVFAPEWLNELCD 177 (377)
T ss_dssp CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTC------CEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccCC------CEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 34666778999999999999999999998766 99999999998754 4888899999999986 4677777
Q ss_pred HHhhcCcEEEEecccccccccC-hhhhhhhCCC--CCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGL--EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~--~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|++||+++++|++|+.+.+.. .... .+..+ ...++++.+.+|+++ .+..+|++++.++.......... .+..
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~~~- 254 (377)
T 3fdb_A 178 LAHRYDARVLVDEIHAPLVFDGQHTVA-AGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLS-PVIK- 254 (377)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSCCCCG-GGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSC-HHHH-
T ss_pred HHHHcCCEEEEEcccchhhcCCCCCcc-cHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHH-Hhhc-
Confidence 8999999999999998755432 1110 01111 112477888999995 34567877775544333211100 0000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
.....+....+..++.. +.+.+++..++..++.+
T Consensus 255 ---------------------------------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~ 288 (377)
T 3fdb_A 255 ---------------------------------------------DGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHD 288 (377)
T ss_dssp ---------------------------------------------CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHH
Confidence 00010112222333332 24567888889999999
Q ss_pred HHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEEC---CeeEEEEEecCCCCCHHHHH
Q psy3048 264 KFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASFQ---GRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 264 ~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~~lRi~~~~~~~~~edid 338 (367)
++.+.|++ +||+++..+.....+++.++.. ....++.+.|.++ | +.+.++... +..++|+++. +++++++
T Consensus 289 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~~Ris~~---~~~e~i~ 363 (377)
T 3fdb_A 289 FLLHEIPKRIPGAKITPMQATYLMWIDFRDT-TIEGSPSEFFIEKAK-VAMNDGAWFGEDGTGFCRLNFA---TSREVLE 363 (377)
T ss_dssp HHHHHHHHHSTTCEECCCSBCSEEEEECTTS-CCCSCHHHHHHHHHC-EECEEGGGGCGGGTTEEEEECC---SCHHHHH
T ss_pred HHHHHHHhhCCCceEecCCeeEEEEEECccc-CCCHHHHHHHHHhCC-EEecCChhccCCCCCEEEEEeC---CCHHHHH
Confidence 99999988 7899887554433445666541 1234667777766 6 445443221 2579999764 3799999
Q ss_pred HHHHHHHHHHHH
Q psy3048 339 FAWNEISHQSSE 350 (367)
Q Consensus 339 ~li~~l~~~~~~ 350 (367)
+++++|++++++
T Consensus 364 ~~l~~l~~~l~~ 375 (377)
T 3fdb_A 364 EAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 97
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.82 E-value=1.5e-19 Score=170.92 Aligned_cols=257 Identities=12% Similarity=0.018 Sum_probs=166.3
Q ss_pred ceEEEecCCcchhH--HHHHHhCCcceEEEecC--C--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc-CCh
Q psy3048 30 RLVAYASDQSNSSV--EKSAIIGDVPVRQLRSD--D--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF-DNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~--~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i-~dl 102 (367)
+.+++ ....|++. ...++..| +++.++.+ . +..+|.++++ +++. +.+|++++++|++|.+ .|+
T Consensus 93 d~vl~-~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~------t~~v~~~~~~n~tG~~~~~l 162 (362)
T 2c0r_A 93 QTANY-VMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDN------AAYLHLTSNETIEGAQFKAF 162 (362)
T ss_dssp CEEEE-EECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTT------EEEEEEESEETTTTEECSSC
T ss_pred CeEEE-EecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCC------cCEEEEeCCcCccceecccc
Confidence 44444 44566663 45666779 99999886 2 2235666554 4333 3588999999999995 888
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++| +|+++++|++|+.+....+ +...|+++.++|||++ |.|+|+++.+++ .+.......+.++.
T Consensus 163 ~~i------~~~~vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~~~~~-~~~~l~~~~~~~~~ 226 (362)
T 2c0r_A 163 PDT------GSVPLIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVIVRED-LVAESPKHLPTMLR 226 (362)
T ss_dssp CCC------TTSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEEEEGG-GSSSCCTTSCGGGC
T ss_pred ccc------CCCEEEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEEEcHH-HHhhccccCchHHh
Confidence 887 8999999999987654322 2223999999999995 889999998653 22211111111110
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISL 261 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~l 261 (367)
.. .. ......+ ++ ...+...++.++++.+... +++++.++..++
T Consensus 227 ~~-----------------~~--------~~~~~~~-------~t---~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 271 (362)
T 2c0r_A 227 YD-----------------TY--------VKNNSLY-------NT---PPSFGIYMVNEVLKWIEERGGLEGVQQANRKK 271 (362)
T ss_dssp HH-----------------HH--------HHTTTCS-------SC---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HH-----------------HH--------hhccCcC-------CC---chHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 00 00 0000000 00 1112335556667665555 789999999999
Q ss_pred HHHHHHHhcCCCCe-EEeCCC---CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHH
Q psy3048 262 AKKFADLVEKDDRF-ELVCPP---SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 262 a~~l~~~L~~~~g~-~~~~~~---~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edi 337 (367)
++++.+.|++++++ ++..++ ..++++|.++. .....++.+.|.++|+. +.++. ...+.+|+|+ ..+++++|+
T Consensus 272 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gi~-~~~g~-~~~~~iRis~-~~~~~~e~i 347 (362)
T 2c0r_A 272 ASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-EELEKEFVKASEQEGFV-GLKGH-RSVGGLRASI-YNAVPYESC 347 (362)
T ss_dssp HHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-HHHHHHHHHHHHHTTEE-SCBCC-TTTCSEEEEC-CTTSCHHHH
T ss_pred HHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-cchHHHHHHHHHHCCCe-eccCC-CCCCEEEEEC-CCCCCHHHH
Confidence 99999999998546 775432 34567777753 34467888999888853 32221 1134699976 567789999
Q ss_pred HHHHHHHHHHHHHh
Q psy3048 338 AFAWNEISHQSSEM 351 (367)
Q Consensus 338 d~li~~l~~~~~~~ 351 (367)
++++++|++++++.
T Consensus 348 ~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 348 EALVQFMEHFKRSR 361 (362)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987653
No 98
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.82 E-value=4.2e-19 Score=168.79 Aligned_cols=259 Identities=10% Similarity=-0.008 Sum_probs=171.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
.-.|+++..+|.++...++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|.+.| ++
T Consensus 106 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~ 179 (383)
T 3kax_A 106 NESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGV------KLMLLCSPHNPIGRVWKKEELT 179 (383)
T ss_dssp TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTC------CEEEEESSBTTTTBCCCHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCC------eEEEEeCCCCCCCcCcCHHHHH
Confidence 34677888999999999999999999998853 35699999999995444 47778999999999966 56
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCC----CCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDR 178 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~ 178 (367)
+|.++|++||+++++|++|+.+.+........ ..+ ...++++.+.+|+++ .+.++|+++..++...........
T Consensus 180 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 258 (383)
T 3kax_A 180 KLGSLCTKYNVIVVADEIHSDIIYADHTHTPF-ASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQY 258 (383)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG-GGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCceeH-hhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHh
Confidence 66666999999999999998754422100000 001 022578889999997 445678887754443322110000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh--hHHHHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY--GLKGLQAYLR 256 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g~~~~~~ 256 (367)
.+ ..... ..+...++...+ ..+.+++..+
T Consensus 259 ~~----------------------------------------------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~ 289 (383)
T 3kax_A 259 RQ----------------------------------------------GFHGL---NIFAYTAMQSAYTECNDWLNEIRF 289 (383)
T ss_dssp HT----------------------------------------------TCCCC---CHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hc----------------------------------------------ccCCC---CHHHHHHHHHHHHhhHHHHHHHHH
Confidence 00 00000 112222222222 3455788888
Q ss_pred HHHHHHHHHHHHhcC-CCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeEE---CCeeEEEEEecCCC
Q psy3048 257 KHISLAKKFADLVEK-DDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKASF---QGRPFLRFVVTSPE 331 (367)
Q Consensus 257 ~~~~la~~l~~~L~~-~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~---~~~~~lRi~~~~~~ 331 (367)
+..++++++.+.|++ +||+++..+.....+++.++.......++.+.|. +.| +.+.++.. .+..++|++++
T Consensus 290 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~iRi~~~--- 365 (383)
T 3kax_A 290 YIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGK-IIVEPGEKYGLGGEEHIGINIG--- 365 (383)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSC-EECEESGGGCTTCTTEEEEECS---
T ss_pred HHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhhCC-EEeECchhhcCCCCCeEEEEEc---
Confidence 899999999999988 7899887544333334666531123668889897 567 44544321 23579999764
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy3048 332 TNQCDVAFAWNEISHQS 348 (367)
Q Consensus 332 ~~~edid~li~~l~~~~ 348 (367)
++++|+++++++|++++
T Consensus 366 ~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 366 CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 47999999999998864
No 99
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=3.2e-20 Score=175.11 Aligned_cols=258 Identities=13% Similarity=0.005 Sum_probs=169.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHH-HHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLT-AVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~-~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
-+|+++..+|++.. .++..| +++.+++++ ++.+|+++|++ ++++.+ .+|++++++|++|.+.| +|
T Consensus 95 ~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~------k~v~~~~~~nptG~~~~-----~i 161 (360)
T 1w23_A 95 NYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLNEND------AYLHITSNNTIYGTQYQ-----NF 161 (360)
T ss_dssp EEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTE------EEEEEESEETTTTEECS-----SC
T ss_pred cEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccCCCC------CEEEEeCCCCCcceecc-----cc
Confidence 36777888887743 356679 999999874 56789999998 775444 58888999999999865 33
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+++||+++++|++|+.+....+ +...|++++++||+++ |.|+|+++++++ .+.......+.++...
T Consensus 162 ~~~~~~~li~D~a~~~~~~~~~--------~~~~di~~~s~sK~~~-~~G~G~~~~~~~-~~~~~~~~~~~~~~~~---- 227 (360)
T 1w23_A 162 PEINHAPLIADMSSDILSRPLK--------VNQFGMIYAGAQKNLG-PSGVTVVIVKKD-LLNTKVEQVPTMLQYA---- 227 (360)
T ss_dssp CCCCSSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTS-CTTCEEEEEEHH-HHCSCCTTCCGGGCHH----
T ss_pred cccCCceEEEechhhcCCCCcC--------cccCCEEEEEcccccC-CCCcEEEEEcHH-HHhhcccCCcchhhhh----
Confidence 4489999999999987654322 1112899999999886 779999998643 2222111111111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~la~~l~~ 267 (367)
.+. ... +............+..+++.+... +++++.++..++++++.+
T Consensus 228 ----------~~~-----------~~~----------~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~ 276 (360)
T 1w23_A 228 ----------THI-----------KSD----------SLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYD 276 (360)
T ss_dssp ----------HHH-----------HTT----------TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ----------hhh-----------hcc----------CCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 000 000 000001112224455566655555 789999999999999999
Q ss_pred HhcCCCCe-EEeCCC--Cce-eEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRF-ELVCPP--SMG-LVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~-~~~~~~--~~~-~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|++++++ .+..++ ..+ +++|++++ .....++.+.|.++|+.. .+.. ....++|+++ ..+++++|+++++++
T Consensus 277 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~-~~~~-~~~~~iRis~-~~~~~~~~i~~~~~~ 352 (360)
T 1w23_A 277 TIDESNGFYVGHAEKGSRSLMNVTFNLRN-EELNQQFLAKAKEQGFVG-LNGH-RSVGGCRASI-YNAVPIDACIALREL 352 (360)
T ss_dssp HHHTTTTSSEESSCGGGBCSSEEEEECSS-HHHHHHHHHHHHHTTEES-CBCC-TTTCSEEEEC-CTTSCHHHHHHHHHH
T ss_pred HHHHccCcccccCCchhccCcEEEEEcCC-CccHHHHHHHHHHCCeee-ecCC-CCCCeEEEEe-cCCCCHHHHHHHHHH
Confidence 99998765 554222 334 77787754 234567888888888543 2221 1235899976 567789999999999
Q ss_pred HHHHHHH
Q psy3048 344 ISHQSSE 350 (367)
Q Consensus 344 l~~~~~~ 350 (367)
|++++++
T Consensus 353 l~~~~~~ 359 (360)
T 1w23_A 353 MIQFKEN 359 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998765
No 100
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.82 E-value=2.9e-18 Score=162.65 Aligned_cols=249 Identities=12% Similarity=0.011 Sum_probs=173.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|++++.+|.++..+++..|++++.++.++++.+|+++|++++++ .+ .+|++++++|++|.+.|++++.++
T Consensus 116 gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~~~~l~~l 189 (369)
T 3cq5_A 116 GRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQP------DIVFVTTPNNPTGDVTSLDDVERI 189 (369)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCC------SEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCC------CEEEEeCCCCCCCCCCCHHHHHHH
Confidence 34677778899999999999999999999887789999999999986 33 367789999999999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
|+.+++++++|++|+.+....+... ........++++.+.||+++.| ..+|+++.++ +...........
T Consensus 190 ~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~-------- 259 (369)
T 3cq5_A 190 INVAPGIVIVDEAYAEFSPSPSATT-LLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP-AFIDAVMLVRLP-------- 259 (369)
T ss_dssp HHHCSSEEEEECTTGGGCCSCCGGG-GTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT-HHHHHHHTTSCT--------
T ss_pred HHhCCCEEEEECCchhhcCCcchHH-HHhhCCCCEEEEEechHhcCCcccceEEEEeCH-HHHHHHHHcCCC--------
Confidence 9999999999999987654211111 1111111368889999999743 4578888854 333221110000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
| + ...+....+..+++. .+.+++..++..++++++.+
T Consensus 260 -------~-------------------------------~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~ 296 (369)
T 3cq5_A 260 -------Y-------------------------------H---LSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAA 296 (369)
T ss_dssp -------T-------------------------------C---SCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHH
T ss_pred -------C-------------------------------C---CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000111222333332 34577788888899999999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.|++. |+++. ++..+.+.+.++. ...++.+.|.++|+ .+.+. ..+.++|+++. +++|+++++++|+++
T Consensus 297 ~L~~~-g~~~~-~~~~~~~~~~~~~---~~~~l~~~l~~~gi-~v~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 297 RLEEL-GYAVV-PSESNFVFFGDFS---DQHAAWQAFLDRGV-LIRDV--GIAGHLRTTIG----VPEENDAFLDAAAEI 364 (369)
T ss_dssp HHHHH-TCEEE-CCSSSEEEEECCS---SHHHHHHHHHHTTE-ECBCC--SCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred HHHhC-CCEEC-CCCCeEEEEECCC---CHHHHHHHHHHCCE-EEEEC--CCCCeEEEEeC----CHHHHHHHHHHHHHH
Confidence 99884 88876 4555667776641 25678888888884 44333 22468999763 689999999999987
Q ss_pred HH
Q psy3048 348 SS 349 (367)
Q Consensus 348 ~~ 349 (367)
++
T Consensus 365 ~~ 366 (369)
T 3cq5_A 365 IK 366 (369)
T ss_dssp HT
T ss_pred Hh
Confidence 53
No 101
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.81 E-value=2.8e-19 Score=170.56 Aligned_cols=256 Identities=11% Similarity=0.004 Sum_probs=172.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
.-.|++++.+|.++...++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|.+.| +++|
T Consensus 115 gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~~~~~~l~~i 188 (386)
T 1u08_A 115 GDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERT------RLVILNTPHNPSATVWQQADFAAL 188 (386)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccC------EEEEEeCCCCCCCccCCHHHHHHH
Confidence 34677778899999999999999999999865 58899999999986443 57778899999999864 7999
Q ss_pred HHHHhhcCcEEEEecccccccccCh---hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
+++|++||+++++|++|+.+.+... .... +.+....|+++.+.||+++.| ..+|+++.++ +....... ...+.
T Consensus 189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~-~~~~~ 265 (386)
T 1u08_A 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLA-HPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA-PISAEIRK-VHQYL 265 (386)
T ss_dssp HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGG-SHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH-HHHHHHHH-HHHHH
T ss_pred HHHHHHcCcEEEEEccccccccCCCCCcChhc-ccCccCcEEEEecchhhcCCcccceEEEEcCH-HHHHHHHH-HHHhh
Confidence 9999999999999999987544221 1100 000112489999999998733 3488888753 32222100 00000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
.++ ........+..+++.. .+.+++..++..++
T Consensus 266 -------------------------------------------~~~---~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~ 298 (386)
T 1u08_A 266 -------------------------------------------TFS---VNTPAQLALADMLRAE-PEHYLALPDFYRQK 298 (386)
T ss_dssp -------------------------------------------TSS---CCHHHHHHHHHHHHHC-THHHHTHHHHHHHH
T ss_pred -------------------------------------------ccC---CChHHHHHHHHHHhCC-cHHHHHHHHHHHHH
Confidence 000 0001122333444432 55678888899999
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-hHHHHHHHHHh-ccCcEEEEEeE-E----CCeeEEEEEecCCCCCH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN-DLTNQLYERLM-SHKQIYIIKAS-F----QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~-~~g~~~~~~~~-~----~~~~~lRi~~~~~~~~~ 334 (367)
++++.+.|+++ |+++..+.....++++++... ....++.+.|. +.|+ .+.++. + .+..++|+++. +++
T Consensus 299 ~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~f~~~~~~~~~iRis~~---~~~ 373 (386)
T 1u08_A 299 RDILVNALNES-RLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGV-AAIPLSVFCADPFPHKLIRLCFA---KKE 373 (386)
T ss_dssp HHHHHHHTTSS-SCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCE-ECEEGGGGCSSCCCSCEEEEECC---SCH
T ss_pred HHHHHHHHHHC-CCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCE-EEeCchHhCCCCCCCCEEEEEEc---CCH
Confidence 99999999987 888765544456777775310 23567888876 4574 444332 2 24579999764 379
Q ss_pred HHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISH 346 (367)
Q Consensus 335 edid~li~~l~~ 346 (367)
+|+++++++|++
T Consensus 374 ~~i~~~~~~l~~ 385 (386)
T 1u08_A 374 STLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999998864
No 102
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.81 E-value=9.5e-19 Score=167.14 Aligned_cols=263 Identities=11% Similarity=-0.012 Sum_probs=172.0
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
-.|++.+.+|.++...++..|++++.++.+. ++.+|+++|++++++.. +.+|++++++|++|.+.| +++
T Consensus 112 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~l~~p~nptG~~~~~~~l~~ 186 (390)
T 1d2f_A 112 EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE-----CKIMLLCSPQNPTGKVWTCDELEI 186 (390)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTT-----EEEEEEESSCTTTCCCCCTTHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCC-----CeEEEEeCCCCCCCcCcCHHHHHH
Confidence 4667778899999999999999999998853 24689999999996421 357777899999999966 899
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCC-C-cceeeeccccccc-cCCcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-Y-VDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~-~-~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+....... +..+. . .|. +.+.+|+++ .+..+|+++++++......... .
T Consensus 187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~----~ 260 (390)
T 1d2f_A 187 MADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSA----L 260 (390)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHH----H
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHH----H
Confidence 999999999999999999876542211100 11121 1 256 888999997 3345788888654433221100 0
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
... . .+. ....+....+.++++. +.+.+++..++..++
T Consensus 261 ~~~-~--------------------------------------~~~--~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~ 298 (390)
T 1d2f_A 261 KGR-D--------------------------------------GLS--SPSVLALTAHIAAYQQ-GAPWLDALRIYLKDN 298 (390)
T ss_dssp HTT-S--------------------------------------CCC--SCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHH
T ss_pred hhh-c--------------------------------------ccC--CCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 000 0 000 0000111222333432 345678888888999
Q ss_pred HHHHHHHhcC-CCCeEEeCCCCceeE-EEEEcCCchHHHHHHHHHh-ccCcEEEEEeEE-C--CeeEEEEEecCCCCCHH
Q psy3048 262 AKKFADLVEK-DDRFELVCPPSMGLV-CFRLKGDNDLTNQLYERLM-SHKQIYIIKASF-Q--GRPFLRFVVTSPETNQC 335 (367)
Q Consensus 262 a~~l~~~L~~-~~g~~~~~~~~~~~v-~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~-~--~~~~lRi~~~~~~~~~e 335 (367)
.+++.+.|++ +||+.+..+ ..+.+ .+.++.......++.+.|. +.|+ .+.++.. . +..++|+++.. +++
T Consensus 299 ~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi-~v~~g~~f~~~~~~~~Ris~~~---~~~ 373 (390)
T 1d2f_A 299 LTYIADKMNAAFPELNWQIP-QSTYLAWLDLRPLNIDDNALQKALIEQEKV-AIMPGYTYGEEGRGFVRLNAGC---PRS 373 (390)
T ss_dssp HHHHHHHHHHHCSSCCCCCC-SBCSEEEEECGGGCCCHHHHHHHHHHTTCE-ECEEGGGGCGGGTTEEEEECCS---CHH
T ss_pred HHHHHHHHHhhCCCCEEecC-CccEEEEEEccccCCCHHHHHHHHHHHcCE-EeeCccccCCCCCCeEEEEecC---CHH
Confidence 9999999988 788876543 34443 5666531123567888888 5674 4444322 1 34689997643 488
Q ss_pred HHHHHHHHHHHHHHHh
Q psy3048 336 DVAFAWNEISHQSSEM 351 (367)
Q Consensus 336 did~li~~l~~~~~~~ 351 (367)
+++.+++.|+++++++
T Consensus 374 ~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 374 KLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 103
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.81 E-value=1.6e-18 Score=169.12 Aligned_cols=270 Identities=11% Similarity=0.025 Sum_probs=175.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEE-EEecCCCcccccCC---hhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL-VATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~v-v~~~~~t~~G~i~d---l~~I 105 (367)
.-.|++.+.+|.++..+++..|++++.++.++++ +|+++|+++++.....+..+.+| ++.+++|++|.+.| +++|
T Consensus 164 Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i 242 (448)
T 3aow_A 164 GDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYL 242 (448)
T ss_dssp TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHH
Confidence 3456777889999999999999999999987655 99999999997321111124455 56788999999865 5799
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
.++|++||+++++|++|+.+.+....... .+ +....++...+.+|+++.+..+|+++.++ +..+........+
T Consensus 243 ~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~-~~~~~vi~~~S~SK~~~~GlriG~v~~~~-~l~~~l~~~~~~~--- 317 (448)
T 3aow_A 243 LELASEYDFIVVEDDPYGELRYSGNPEKKIKAL-DNEGRVIYLGTFSKILAPGFRIGWMVGDP-GIIRKMEIAKQST--- 317 (448)
T ss_dssp HHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG-CTTSCEEEEEESTTTTCGGGCCEEEEECH-HHHHHHHHHHHHH---
T ss_pred HHHHHHcCCEEEEECCCccccCCCCCCcCHHhc-CCCCCEEEEccchhhccccccEEEEEeCH-HHHHHHHHHHHHh---
Confidence 99999999999999999876542211000 01 11123678888999998333489988853 3332211000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la 262 (367)
.++ ...+....+..+|+..+ .+.++++.++..+++
T Consensus 318 -----------------------------------------~~~---~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 353 (448)
T 3aow_A 318 -----------------------------------------DLC---TNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRR 353 (448)
T ss_dssp -----------------------------------------HSS---CCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cCC---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 000 01111222333333211 344677777777889
Q ss_pred HHHHHHhcC-CC-CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E----CCeeEEEEEecCCCCCHH
Q psy3048 263 KKFADLVEK-DD-RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F----QGRPFLRFVVTSPETNQC 335 (367)
Q Consensus 263 ~~l~~~L~~-~~-g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~----~~~~~lRi~~~~~~~~~e 335 (367)
+++.+.|++ +| |+++..|.....++++++. .....++.++|.++|+. +.++. + .+..++|+++.. .+++
T Consensus 354 ~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~-~~~~~~l~~~l~~~gV~-v~pg~~f~~~~~~~~~iRls~~~--~~~e 429 (448)
T 3aow_A 354 DAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLERAIKKGVA-YVPGEAFYAHRDVKNTMRLNFTY--VDED 429 (448)
T ss_dssp HHHHHHHHHHCCTTCEECCCSBSSEEEEECST-TCCHHHHHHHHHHTTEE-CEEGGGGSTTCCCCSEEEEECSS--SCTH
T ss_pred HHHHHHHHHhCCCCeEEeCCCccEEEEEEcCC-CCCHHHHHHHHHHCCcE-EEcchhhcCCCCCCCEEEEEeCC--CCHH
Confidence 999999986 57 6887655555566777753 22356889999989854 44332 2 235799997643 3789
Q ss_pred HHHHHHHHHHHHHHHhhC
Q psy3048 336 DVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 336 did~li~~l~~~~~~~~~ 353 (367)
||+.++++|.+++++..+
T Consensus 430 ~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 430 KIMEGIKRLAETIKEELK 447 (448)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999887643
No 104
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.80 E-value=1.7e-18 Score=167.05 Aligned_cols=267 Identities=12% Similarity=0.093 Sum_probs=166.0
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++.+|.+....+ +..|++++.++. |+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 95 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~~~~------~~v~~~~~~n~~G~~~~l~~i 162 (412)
T 2cb1_A 95 GDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP------EPEAVREALSAKT------RAVFVETVANPALLVPDLEAL 162 (412)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhccCC------eEEEEeCCCCCCcccccHHHH
Confidence 346777888999877764 347889998875 3899999887654 488889999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecchh-hhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNANH-LTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~~~-~~~~~~~~~~yl~~ 183 (367)
+++|++||+++++|++|+.+.+...... . .+|+++.++||++++|.+ .|++++.++.. ..+.....++....
T Consensus 163 ~~l~~~~~~~li~D~~~~~~~~~~~~~~---~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 163 ATLAEEAGVALVVDNTFGAAGALCRPLA---W---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp HHHHHHHTCEEEEECGGGTTTTSCCGGG---G---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred HHHHHHcCCEEEEECCCccccccCCccc---c---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 9999999999999999987622222111 1 359999999999998876 78888765331 10000000111100
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccc-ccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQ-TPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
... ...+.-..+... + +.+. ...+....+...+..+. +.+.+.++.++..+++
T Consensus 237 ~~~-----~~~~~~~~~~~~-------~------------r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~~~~~~~~~~ 290 (412)
T 2cb1_A 237 QIP-----WEALRARCFPER-------V------------RTLGLSLCGMALSPFNAYLLFQ--GLETVALRVARMSETA 290 (412)
T ss_dssp --------HHHHGGGHHHHH-------H------------HHHHTTTTCCCCCHHHHHHHHH--HGGGHHHHHHHHHHHH
T ss_pred cch-----hhccchHHHHHH-------H------------HHHHHHhcCCCCChHHhHHHHc--CCchHHHHHHHHHHHH
Confidence 000 000000000000 0 0000 00011112233333332 3445667777788999
Q ss_pred HHHHHHhcCCCCeEEe-CC----------------CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe--------EE
Q psy3048 263 KKFADLVEKDDRFELV-CP----------------PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA--------SF 317 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~-~~----------------~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--------~~ 317 (367)
+++.+.|.+++++.++ .| ...++++|.+ + + .+.+...|.+.|++. ..+ ..
T Consensus 291 ~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~--~~~~~~~l~~~~i~~-~~s~g~~~sl~~~ 365 (412)
T 2cb1_A 291 RFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-D--LERASRFLGAIRLLK-AANLGDARTLLVH 365 (412)
T ss_dssp HHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-S--HHHHHHHHHHCSSEE-CSCCSCSSCEEEC
T ss_pred HHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-C--HHHHHHHHHhCCeee-ecccCCCcceeec
Confidence 9999999999998855 22 1346888988 4 2 345555666666543 221 11
Q ss_pred C----------------C--eeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 318 Q----------------G--RPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 318 ~----------------~--~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
. | ++.+|+|+ ..++++++|+.++++|++
T Consensus 366 ~~~~~~~~~~~~~~~~~g~~~~~iR~s~-g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 366 PWTTTHSRLKEEARLQAGVTPGLVRVSV-GLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TTTTTTTTSCHHHHHHTTCCTTEEEEEC-CSSCHHHHHHHHHHHHHC
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEe-ccCCHHHHHHHHHHHHhh
Confidence 1 1 46899976 678889999999999864
No 105
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.2e-19 Score=174.65 Aligned_cols=262 Identities=13% Similarity=0.014 Sum_probs=173.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC---CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~---~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~ 103 (367)
.-.|++++.+|.++..+++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|.+.| ++
T Consensus 110 gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~------~~v~l~~~~nptG~~~~~~~l~ 183 (411)
T 2o0r_A 110 GSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRT------RALIINSPHNPTGAVLSATELA 183 (411)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCc------eEEEEeCCCCCCCCCCCHHHHH
Confidence 34677788899999999999999999998864 46799999999986543 57778899999999865 59
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhh-hh-hhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEY-AH-LKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+|+++|++||+++++|++|+.+.+..... .. .+.+....|+++.+.+|+++ ++| +|+++.+ ++....... ...
T Consensus 184 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~-~~~~~~l~~-~~~ 260 (411)
T 2o0r_A 184 AIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN-CTGWKIGWACGP-AELIAGVRA-AKQ 260 (411)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT-CTTTCEEEEECC-HHHHHHHHH-HHH
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC-CccceEEEEeeC-HHHHHHHHH-HHh
Confidence 99999999999999999998765421110 00 01111245899999999886 345 8888874 333322110 000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+.. ++ .......++..+++. +.+.+++..++..
T Consensus 261 ~~~-------------------------------------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~ 293 (411)
T 2o0r_A 261 YLS-------------------------------------------YV---GGAPFQPAVALALDT-EDAWVAALRNSLR 293 (411)
T ss_dssp HHT-------------------------------------------SC---CCTTHHHHHHHHHHH-CHHHHHHHHHHHH
T ss_pred hcc-------------------------------------------CC---CChHHHHHHHHHHhC-ChHHHHHHHHHHH
Confidence 000 00 000112333444443 2566788888899
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC-chHHHHHHHHHh-ccCcEEEEEe-EE---C----------CeeEE
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD-NDLTNQLYERLM-SHKQIYIIKA-SF---Q----------GRPFL 323 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~-~~g~~~~~~~-~~---~----------~~~~l 323 (367)
++++++.+.|+++ |+++..+.....+++.++.. .....++.++|. +.|+ .+.++ .+ . +..++
T Consensus 294 ~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~f~~~~~~~~~~~~~~~~~~i 371 (411)
T 2o0r_A 294 ARRDRLAAGLTEI-GFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGV-AAIPMSAFCDPAAGQASQQADVWNHLV 371 (411)
T ss_dssp HHHHHHHHHHHHH-TCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSE-ECEEGGGGSCCC--------CCGGGCE
T ss_pred HHHHHHHHHHHHc-CCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCE-EEcChhhhCCCccccccccccCCCCeE
Confidence 9999999999887 88876544333667777531 012567888776 4574 44432 11 1 35689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
|+++. ++++|++++++.|++++++..
T Consensus 372 Ris~~---~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 372 RFTFC---KRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp EEECC---SCHHHHHHHHHHHGGGGC---
T ss_pred EEEec---CCHHHHHHHHHHHHHHHhccC
Confidence 99763 379999999999998765543
No 106
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.80 E-value=8.6e-19 Score=167.40 Aligned_cols=275 Identities=12% Similarity=0.063 Sum_probs=171.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|++++.+|.+...+++..|++++.++.++ ++.+|+++|++++++.+ .+|+++ +++|.+.|+++|.++
T Consensus 79 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~~~---~~~G~~~~~~~i~~l 149 (393)
T 1mdo_A 79 GDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQT------KAIIPV---HYAGAPADLDAIYAL 149 (393)
T ss_dssp TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTE------EEECCB---CGGGCCCCHHHHHHH
T ss_pred CCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCc------eEEEEe---CCCCCcCCHHHHHHH
Confidence 34677889999999999999999999999875 47899999999987543 355554 479999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++++|++|+.+...... . .+. .|++++++| |++.++ .+|+++.++++..................
T Consensus 150 ~~~~~~~li~D~a~~~g~~~~~~--~--~~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (393)
T 1mdo_A 150 GERYGIPVIEDAAHATGTSYKGR--H--IGA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAW 222 (393)
T ss_dssp HHHHTCCBCEECTTCTTCEETTE--E--TTS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC--
T ss_pred HHHcCCeEEEECccccCCeECCe--e--cCC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccch
Confidence 99999999999999865432211 1 121 599999999 999754 56666665444333221100000000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
. .+ .. ..|.. ++.. ......+...+ .+++.....+++++..++..++++++.
T Consensus 223 ---~---~~-----~~---~~~~~-~~~~-----------~~g~~~~~~~~--~~a~~~~~l~~~~~~~~~~~~~~~~l~ 274 (393)
T 1mdo_A 223 ---D---RQ-----SG---GRAPQ-AEVL-----------APGYKYNLPDL--NAAIALAQLQKLDALNARRAAIAAQYH 274 (393)
T ss_dssp -----------------------C-CEES-----------SCCCBCCCCHH--HHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ---h---hh-----cc---ccccc-cccc-----------ccCccCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 00000 0000 00000011222 222222234567888888999999999
Q ss_pred HHhcCCCCeEEeCCC------CceeEEEEEcCC--chHHHHHHHHHhccCcEEEEEeEEC--------------------
Q psy3048 267 DLVEKDDRFELVCPP------SMGLVCFRLKGD--NDLTNQLYERLMSHKQIYIIKASFQ-------------------- 318 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~------~~~~v~f~~~~~--~~~~~~l~~~L~~~g~~~~~~~~~~-------------------- 318 (367)
+.|++++ +++..++ ....+.++++.. .....++.+.|.++|+. +.+....
T Consensus 275 ~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (393)
T 1mdo_A 275 QAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIG-TGLHFRAAHTQKYYRERFPTLTLPDTE 352 (393)
T ss_dssp HHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBC-CBCCCCCGGGSHHHHHHSTTCCCHHHH
T ss_pred HHHhcCC-cccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCC-cccccCccccChhhhccCCccCChhHH
Confidence 9999985 7775422 223567776520 11356888999888853 3322111
Q ss_pred --CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 319 --GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 319 --~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
...++|+++ ..+++++|+++++++|+++++..
T Consensus 353 ~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 353 WNSERICSLPL-FPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp HHHTTEEEECC-CTTCCHHHHHHHHHHHHHHHC--
T ss_pred HHHhCEEEecC-CCCCCHHHHHHHHHHHHHHHhcC
Confidence 023799954 67889999999999999987654
No 107
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.80 E-value=3.3e-19 Score=170.89 Aligned_cols=262 Identities=12% Similarity=0.036 Sum_probs=170.8
Q ss_pred ceEEEecCCcchhHHH-H--HHhCCc--ceEEEecC-CCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCCh
Q psy3048 30 RLVAYASDQSNSSVEK-S--AIIGDV--PVRQLRSD-DNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~-~--~~~~g~--~v~~v~~~-~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl 102 (367)
+-.|++++.+|.+... . +...|. +++.++++ +++.+|+++|++++++ .+ .+|+++ + +..|...|+
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~------~~v~~~-~-~~~~~~~~l 180 (405)
T 2vi8_A 109 GDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRP------KLIVAA-A-AAYPRIIDF 180 (405)
T ss_dssp TCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCC------SEEEEC-C-SSCCSCCCH
T ss_pred CCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCC------eEEEEe-C-CCCCccCCH
Confidence 3456667788877643 1 123343 66777765 5788999999999976 33 255443 3 335777799
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++|.++|++||+++++|++|+.+....+... ..+..+|+++.++||++++|.| |+++.+ ++...........+..
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~~~ 255 (405)
T 2vi8_A 181 AKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPGIQ 255 (405)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhccccc
Confidence 9999999999999999999985433222111 1123469999999999998888 888875 3333221000000000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
. .+ ......++.+++.....++++++.++..+++
T Consensus 256 ~--------~~--------------------------------------~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~ 289 (405)
T 2vi8_A 256 G--------GP--------------------------------------LMHVIAAKAVAFGEALQDDFKAYAKRVVDNA 289 (405)
T ss_dssp S--------SC--------------------------------------CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred C--------CC--------------------------------------CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 0 00 0011233345555554568889999999999
Q ss_pred HHHHHHhcCCCCeEEeCCC-CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-------ECCeeEEEEEecC---CC
Q psy3048 263 KKFADLVEKDDRFELVCPP-SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-------FQGRPFLRFVVTS---PE 331 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-------~~~~~~lRi~~~~---~~ 331 (367)
+++.+.|+++ |+++..++ ..+.+.+.++.......++.+.|.++|+ .+.++. ..+..++|+++.. +.
T Consensus 290 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~ 367 (405)
T 2vi8_A 290 KRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGI-TVNKNTIPYDPESPFVTSGIRIGTAAVTTRG 367 (405)
T ss_dssp HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTE-ECEEECCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHHHHHhC-CCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCc-eeccCcCccccCCCCCCCceEEeeeeeeecC
Confidence 9999999998 89887643 4667777775311135678888888884 444332 1134579997642 24
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy3048 332 TNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~ 352 (367)
.+++|+++++++|+++++++.
T Consensus 368 ~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 368 FGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CCHHHHHHHHHHHHHHHTCTT
T ss_pred CCHHHHHHHHHHHHHHHhccc
Confidence 679999999999999876543
No 108
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.80 E-value=3.6e-19 Score=167.21 Aligned_cols=257 Identities=15% Similarity=0.089 Sum_probs=158.0
Q ss_pred eEEEecCCcchhHHH---HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-cccCC---hh
Q psy3048 31 LVAYASDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAFDN---LE 103 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~---~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i~d---l~ 103 (367)
-.|++++.+|.+... .+...|++++.+ .++++.+|+++|++++++.......+.+|++++++|++ |.+.| ++
T Consensus 78 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~ 156 (347)
T 1jg8_A 78 DEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 156 (347)
T ss_dssp CEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred CEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHH
Confidence 356667889987653 566789999988 55678899999999986410000123578889999999 99855 57
Q ss_pred hHHHHHhhcCcEEEEecccccccc---cChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSAL---LLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~---~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|+++|++||+++++|++|..+.+ ..+. ..... .+|.+++++||+++.| .|++++.+++.+.+..... .+
T Consensus 157 ~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~---~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~~~~~~-~~ 229 (347)
T 1jg8_A 157 EICTIAKEHGINVHIDGARIFNASIASGVPV-KEYAG---YADSVMFCLSKGLCAP--VGSVVVGDRDFIERARKAR-KM 229 (347)
T ss_dssp HHHHHHHHHTCEEEEEETTHHHHHHHHCCCH-HHHHH---TCSEEEEESSSTTCCS--SCEEEEECHHHHHHHHHHH-HH
T ss_pred HHHHHHHHCCCEEEeehhhhhcchhhcCCCh-HHhcc---cccEEEEecccccCCC--ceEEEEcCHHHHHHHHHHH-HH
Confidence 889999999999999998743211 1111 11111 3488889999999876 4544444444333211000 00
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
...... ... ..+.....+++.. .+..++..+
T Consensus 230 ~~~~~~-------------------------------------------~~~-~~~~~~~~~l~~~-----~~~~~~~~~ 260 (347)
T 1jg8_A 230 LGGGMR-------------------------------------------QAG-VLAAAGIIALTKM-----VDRLKEDHE 260 (347)
T ss_dssp HTCCCS-------------------------------------------STH-HHHHHHHHHHHHS-----STTHHHHHH
T ss_pred cCCchh-------------------------------------------HHH-HHHHHHHHHHHHH-----HHHHHHHHH
Confidence 100000 000 0011111223221 112233445
Q ss_pred HHHHHHHHhcCCCCeEEe-CCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHH
Q psy3048 261 LAKKFADLVEKDDRFELV-CPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAF 339 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~ 339 (367)
.++++.+.|+++ |+++. .++..+.++++++.......++.++|.++|+. +.+. +..++|+++ +.+++++|+++
T Consensus 261 ~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~~---~~~~iRl~~-~~~~~~e~i~~ 334 (347)
T 1jg8_A 261 NARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVL-ANAV---SDTEIRLVT-HKDVSRNDIEE 334 (347)
T ss_dssp HHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEE-CEEE---ETTEEEEEC-CTTSCHHHHHH
T ss_pred HHHHHHHHHHhc-CceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCE-EecC---CCCeEEEEe-CCCCCHHHHHH
Confidence 677888888777 77653 24556777787753122356888999888844 3332 135899965 56789999999
Q ss_pred HHHHHHHHHHH
Q psy3048 340 AWNEISHQSSE 350 (367)
Q Consensus 340 li~~l~~~~~~ 350 (367)
++++|++++++
T Consensus 335 ~~~~l~~~l~~ 345 (347)
T 1jg8_A 335 ALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998765
No 109
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.80 E-value=7.3e-19 Score=167.73 Aligned_cols=264 Identities=11% Similarity=0.030 Sum_probs=168.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHH-HHH--hhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAV-KED--LAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l-~~~--~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|+++..+|.++..++...|+++++++++ +++.+|+++|++++ ++. + .+|+ +++++|.+.|+++|
T Consensus 78 Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~t------k~v~---~~~~~G~~~~~~~i 148 (377)
T 3ju7_A 78 GKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEV------AIVV---PYATFGSWMNLEEY 148 (377)
T ss_dssp CCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGE------EEEC---CBCGGGBCCCCHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCc------eEEE---EECCCCCccCHHHH
Confidence 3467778899999999999999999999997 57899999999998 555 4 2444 45679999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhh-CCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLK-RGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
.++|+ ||+++++|++|+.+...... . . ......+++++++||++++ ...|++++++++...+.... ...+
T Consensus 149 ~~la~-~~~~vi~D~a~a~g~~~~~~--~-~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~----~~~g 219 (377)
T 3ju7_A 149 EELEK-KGVPVVVDAAPGFGLMNGGM--H-YGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRM----GNFG 219 (377)
T ss_dssp HHHHH-TTCCBEEECTTCTTCEETTE--E-TTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHH----TBTT
T ss_pred HHHHh-cCCEEEEECCCccCCeECCE--e-ccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHH----HhcC
Confidence 99999 99999999999866442211 0 1 0112346777778999987 45666666665443322100 0000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ..+ . ....+.++....+.+++...+.+.++++.++.++++++
T Consensus 220 ~~------~~~----------------------------~--~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~ 263 (377)
T 3ju7_A 220 FD------TNR----------------------------E--CTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEW 263 (377)
T ss_dssp BC------TTS----------------------------C--BCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CC------CCC----------------------------c--eeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0 00001111122333444444556788889999999999
Q ss_pred HHHHhcCCCCeEE-eCCC----Cc-eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE---------EC-----------
Q psy3048 265 FADLVEKDDRFEL-VCPP----SM-GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS---------FQ----------- 318 (367)
Q Consensus 265 l~~~L~~~~g~~~-~~~~----~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---------~~----------- 318 (367)
+.+.|++++++.+ +.++ .. ..+.+.++. ....+++.+.|.++|+. +.... +.
T Consensus 264 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~-~~~~~~~~~~~~~~~~~~~~~~~p~~~ 341 (377)
T 3ju7_A 264 YKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-EVRNKQVIEDLKKQKIE-ARLYFSPSCHQQVLFRNYKSTDLTRTN 341 (377)
T ss_dssp HHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT-TSCHHHHHHHHHTTTBC-CBCTTSSCGGGSGGGTTSCBSCCHHHH
T ss_pred HHHHhcCCCCccccccCCCCCcceEEEEEEEeCC-hhhHHHHHHHHHHCCCc-eecccCCccccchhhhcCCCCCCHHHH
Confidence 9999998865422 1111 11 123444442 22256899999998843 21110 00
Q ss_pred --CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 319 --GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 319 --~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
....+|+ +.++.++++|++++++.|+++++.
T Consensus 342 ~~~~~~l~l-p~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 342 KIAKRIVSL-PLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHEEEE-CCCTTCCHHHHHHHHHHHTC----
T ss_pred HHHhCEEEC-CCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1347999 567889999999999999887664
No 110
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.80 E-value=3e-18 Score=161.95 Aligned_cols=245 Identities=11% Similarity=0.030 Sum_probs=165.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH---HH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL---GP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I---~~ 107 (367)
-.|++++.+|.++...++..|++++.++.++++.+|+++|+++++ .+ .+|++++++|++|.+.|.++| ++
T Consensus 101 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~------~~v~l~~p~nptG~~~~~~~l~~l~~ 173 (356)
T 1fg7_A 101 DAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-GV------KVVYVCSPNNPTGQLINPQDFRTLLE 173 (356)
T ss_dssp CEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TE------EEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CC------CEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 467778899999999999999999999988778899999998885 33 578888999999999775555 55
Q ss_pred HHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
+|+ +|+++++|++|+.+... ..... +.+....+++..+.+|+++ .+..+|+++.+ ++...........|
T Consensus 174 ~~~-~~~~li~De~~~~~~~~-~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~------ 243 (356)
T 1fg7_A 174 LTR-GKAIVVADEAYIEFCPQ-ASLAG-WLAEYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAPY------ 243 (356)
T ss_dssp HHT-TTCEEEEECTTGGGSGG-GCSGG-GTTTCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSS------
T ss_pred hCC-CCCEEEEEccchhhcCC-CcHHH-HHhhCCCEEEEecchHhhcCchhhhEEEEeC-HHHHHHHHHhcCCC------
Confidence 566 99999999999865411 11000 1011123688889999986 33457888884 33332211100000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH---HHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG---LQAYLRKHISLAK 263 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g---~~~~~~~~~~la~ 263 (367)
+ ...+...+++..+...+ +++..++..++++
T Consensus 244 ----------------------------------------~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 277 (356)
T 1fg7_A 244 ----------------------------------------P------LSTPVADIAAQALSPQGIVAMRERVAQIIAERE 277 (356)
T ss_dssp ----------------------------------------C------SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------C------CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 0 01133344444444433 6778888889999
Q ss_pred HHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-eEECC-eeEEEEEecCCCCCHHHHHHHH
Q psy3048 264 KFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-ASFQG-RPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~-~~~lRi~~~~~~~~~edid~li 341 (367)
++.+.|++++++....++..+.+.++++ ...++.+.|.++|+ .+.+ +...+ .+++|+++. +++|+++++
T Consensus 278 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~gI-~v~~~g~~~~~~~~iRis~~----~~~e~~~~~ 348 (356)
T 1fg7_A 278 YLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLWDQGI-ILRDQNKQPSLSGCLRITVG----TREESQRVI 348 (356)
T ss_dssp HHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHHHHTTE-ECEECTTSTTCTTEEEEECC----CHHHHHHHH
T ss_pred HHHHHHHhCCCceEECCCCCeEEEEECC----CHHHHHHHHHHCCE-EEEECCCCCCCCCeEEEEeC----CHHHHHHHH
Confidence 9999999887654444556667777775 25678888987884 4444 32222 358999763 589999999
Q ss_pred HHHHHH
Q psy3048 342 NEISHQ 347 (367)
Q Consensus 342 ~~l~~~ 347 (367)
++|+++
T Consensus 349 ~~l~~~ 354 (356)
T 1fg7_A 349 DALRAE 354 (356)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 998764
No 111
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.80 E-value=1.3e-18 Score=167.04 Aligned_cols=264 Identities=11% Similarity=0.051 Sum_probs=169.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.++..+++..|++++.++.++ ++.+|+++|++++++.+ .+|+ +++++|.+.|+++|.++
T Consensus 103 gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~l~~i~~l 173 (399)
T 2oga_A 103 GDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRT------RALL---PVHLYGHPADMDALREL 173 (399)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTE------EEEC---CBCGGGCCCCHHHHHHH
T ss_pred cCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCC------eEEE---EeCCcCCccCHHHHHHH
Confidence 34677788899999999999999999999875 58899999999987543 3444 35789999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|+++|+++++|++|+.+...... . .+ ...|++++++| |+++.|..+|+++.++++....... +...+..
T Consensus 174 ~~~~~~~li~Dea~~~g~~~~~~--~--~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~----~~~~g~~ 244 (399)
T 2oga_A 174 ADRHGLHIVEDAAQAHGARYRGR--R--IG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRM----LRNYGSR 244 (399)
T ss_dssp HHHHTCEECEECTTCTTCEETTE--E--TT-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHH----HHBTTCS
T ss_pred HHHcCCEEEEECcccccCccCCe--e--cc-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHH----HHhcCcc
Confidence 99999999999999865332111 1 11 12488999985 9997644456666654443322110 0000000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..| .............+..++++.. .+.++++.++..++++++.
T Consensus 245 ------~~~----------------------------~~~~~g~~~~~~~~~~a~~~~~--l~~~~~~~~~~~~~~~~l~ 288 (399)
T 2oga_A 245 ------QKY----------------------------SHETKGTNSRLDEMQAAVLRIR--LAHLDSWNGRRSALAAEYL 288 (399)
T ss_dssp ------STT----------------------------CCCSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHH
T ss_pred ------ccc----------------------------cccccccCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 001 0000000001122333332222 2345667778889999999
Q ss_pred HHhcCCCCeEEeCCC-Cce-e-EEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC-----------C-------------
Q psy3048 267 DLVEKDDRFELVCPP-SMG-L-VCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ-----------G------------- 319 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-~~~-~-v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----------~------------- 319 (367)
+.|++++|+++...+ ..+ . +.|.+... ...++.+.|.++|+. +.+.... +
T Consensus 289 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 365 (399)
T 2oga_A 289 SGLAGLPGIGLPVTAPDTDPVWHLFTVRTE--RRDELRSHLDARGID-TLTHYPVPVHLSPAYAGEAPPEGSLPRAESFA 365 (399)
T ss_dssp HHTTTCTTCBCCCCCTTEECCCSSEEEECS--SHHHHHHHHHHTTBC-CBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHH
T ss_pred HHhccCCCccccCCCCCCcceeEEEEEECC--CHHHHHHHHHHCCCc-eecCCCCccccchhhcccCCCCCCChhHHHHH
Confidence 999999888765433 222 1 12443321 256788889888853 3221100 0
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
..++|+++ +.+++++|+++++++|+++++++
T Consensus 366 ~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 366 RQVLSLPI-GPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHEEEECC-STTCCHHHHHHHHHHHHHHHHSC
T ss_pred hCEEEccC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 25899964 67889999999999999998754
No 112
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.80 E-value=8.7e-19 Score=166.55 Aligned_cols=257 Identities=14% Similarity=0.032 Sum_probs=170.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.-.|++.+.+|.++...++..|++++.++.++++.+|+++|++++++.+ .+|++++++|++|.+.| +++|+
T Consensus 111 gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~~~~~~l~~l~ 184 (376)
T 2dou_A 111 EDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREA------KVLLLNYPNNPTGAVADWGYFEEAL 184 (376)
T ss_dssp TCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHE------EEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCc------eEEEECCCCCCcCccCCHHHHHHHH
Confidence 3457778889999999999999999999985566799999999997654 47778889999999865 78899
Q ss_pred HHHhhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|++||+++++|++|+.+.+...... ....+....++++.+.+|+++.| ..+|+++.+ ++...........+
T Consensus 185 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~---- 259 (376)
T 2dou_A 185 GLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALARLERVKGVI---- 259 (376)
T ss_dssp HHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHHHHHHHHHHH----
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHHHHHHHHHhc----
Confidence 999999999999999987654211000 00111112367888999999643 457888764 33332211000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ....+....+..+++. +.+.+++..++..+++++
T Consensus 260 ------------------------------------------~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~ 295 (376)
T 2dou_A 260 ------------------------------------------DF-NQYAGVLRMGVEALKT-PKEVVRGYARVYRERALG 295 (376)
T ss_dssp ------------------------------------------CC-CSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cc-CCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHH
Confidence 00 0000111223333332 245678888888999999
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-C--CeeEEEEEecCCCCCHHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-Q--GRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~--~~~~lRi~~~~~~~~~edid~li 341 (367)
+.+.|+++ +++..+.....+.++++. .....++.+.|.++|+ .+.+... . +..++|+++.. +++++++++
T Consensus 296 l~~~L~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi-~v~~g~~f~~~~~~~~Ris~~~---~~~~i~~~l 368 (376)
T 2dou_A 296 MAEALKGV--LSLLPPRATMYLWGRLPE-GVDDLEFGLRLVERGV-ALAPGRGFGPGGKGFVRIALVR---PLEELLEAA 368 (376)
T ss_dssp HHHHHTTT--SEECCCCBSSEEEEECCT-TCCHHHHHHHHHHTTE-ECEEGGGGCGGGTTEEEEECCS---CHHHHHHHH
T ss_pred HHHHHHHh--cCccCCCeeEEEEEECCC-CCCHHHHHHHHHHCCE-EEcCchhhCCCCCCeEEEEecC---CHHHHHHHH
Confidence 99999886 666544333346677753 2234678889988874 4443322 1 24689997642 689999999
Q ss_pred HHHHHHH
Q psy3048 342 NEISHQS 348 (367)
Q Consensus 342 ~~l~~~~ 348 (367)
+.|++++
T Consensus 369 ~~l~~~l 375 (376)
T 2dou_A 369 KRIREAL 375 (376)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9998753
No 113
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=4.2e-18 Score=164.89 Aligned_cols=266 Identities=9% Similarity=-0.006 Sum_probs=173.6
Q ss_pred eEEEecCCcchhHHHHHHh-CCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAII-GDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~-~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++++.+|.++...++. .|++++.++.++ ++.+|+++|++++++.. ..+.++++++++|++|.+.| +++|
T Consensus 138 d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i 214 (430)
T 2x5f_A 138 DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN---KDKVIMILNYPNNPTGYTPTHKEVTTI 214 (430)
T ss_dssp CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC---SSEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC---CCCEEEEEcCCCCCCCCcCCHHHHHHH
Confidence 4567778899999999999 999999999864 47899999999997621 11357888999999999988 8999
Q ss_pred HHHHhh-----cCcEEEEecccccccccCh---hhhhhhCCCCCc---ceeeeccccccccC-CcceeEEE--ecchhhh
Q psy3048 106 GPICQE-----YNIWLHVDAAYAGSALLLP---EYAHLKRGLEYV---DSFAFNAHKWLLTN-HDCSAMWV--KNANHLT 171 (367)
Q Consensus 106 ~~l~~~-----~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~---D~~~~~~hK~l~~p-~g~g~l~~--~~~~~~~ 171 (367)
+++|++ ||+++++|++|+.+.+... .....+.+.... ++++.+.+|+++.| ..+|+++. +++....
T Consensus 215 ~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~ 294 (430)
T 2x5f_A 215 VEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKE 294 (430)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHH
T ss_pred HHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHH
Confidence 999999 9999999999987654321 111011122223 56688899999644 44788888 2333332
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHH-Hh-hHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLR-SY-GLK 249 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~ 249 (367)
.............. + ....+....+..+++ .. ..+
T Consensus 295 ~l~~~~~~~~~~~~---------~----------------------------------~~~~~~~~a~~~~l~~~~~~~~ 331 (430)
T 2x5f_A 295 VLEAKVKGLIRSNI---------S----------------------------------SGPLPTQSAVKHVLKNNKQFDK 331 (430)
T ss_dssp HHHHHHHHHHHTTT---------S----------------------------------SCCHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHhhhhhccc---------C----------------------------------CCChHHHHHHHHHHccChHHHH
Confidence 21100000000000 0 001111222333333 21 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEECCeeEEE
Q psy3048 250 GLQAYLRKHISLAKKFADLVE----KDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASFQGRPFLR 324 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~----~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~lR 324 (367)
.+++..++..++.+++.+.|+ ++ |+++..+.....+++.+++ ....++.+.|.+ +|+ .+.++ +..++|
T Consensus 332 ~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~gi-~v~~g---~~~~iR 404 (430)
T 2x5f_A 332 EIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGYFMAIKVHD--VDPEALRKHLIDKYSI-GVIAL---NATDIR 404 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSSEEEEEESS--SCHHHHHHHHHHHHCE-ECEEC---SSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceEEEEeCCCC--CCHHHHHHHHHHhCCE-EEecC---CCCeEE
Confidence 344477788889999999998 55 7877644333346677752 235688888887 774 44443 456899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+++.. ++++|+++++++|+++++++
T Consensus 405 is~~~--~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 405 IAFSC--VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp EEGGG--SCGGGHHHHHHHHHHHHHHH
T ss_pred EEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 97642 48999999999999998764
No 114
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.80 E-value=9.3e-19 Score=167.12 Aligned_cols=258 Identities=11% Similarity=-0.026 Sum_probs=168.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|+++..+|.++...++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|+||.+.+ +++
T Consensus 115 gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~~~~~l~~ 188 (385)
T 1b5p_A 115 GDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRT------KALVVNSPNNPTGAVYPKEVLEA 188 (385)
T ss_dssp TCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCC------EEEEEeCCCCCCCCCcCHHHHHH
Confidence 34567777899999999999999999999863 57899999999886544 47888899999999854 999
Q ss_pred HHHHHhhcCcEEEEecccccccccCh--hhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+..+ .... +.. ..+++..+.+|+++.| ..+|+++.++ +........ .
T Consensus 189 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~~~~l~~~----~ 260 (385)
T 1b5p_A 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFSPGR-VAP--EHTLTVNGAAKAFAMTGWRIGYACGPK-EVIKAMASV----S 260 (385)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG-TCT--TTEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHHH----H
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCCHHH-cCC--CCEEEEEechhhcCCcccceEEEEeCH-HHHHHHHHH----H
Confidence 99999999999999999986544211 1111 111 2367888999998743 3488888743 322221100 0
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH--hhHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS--YGLKGLQAYLRKHI 259 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~g~~~~~~~~~ 259 (367)
..... . ...+....+..++.. .+.+.+++..++..
T Consensus 261 ~~~~~----------------------------------------~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 297 (385)
T 1b5p_A 261 RQSTT----------------------------------------S---PDTIAQWATLEALTNQEASRAFVEMAREAYR 297 (385)
T ss_dssp HTTTC----------------------------------------S---CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hhccC----------------------------------------C---CCHHHHHHHHHHHhCCCcchHHHHHHHHHHH
Confidence 00000 0 000111222223322 03445777788888
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EECCeeEEEEEecCCCCCHHHHH
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~edid 338 (367)
+..+++.+.|+++ |+++..+.....++..++.......++.+.|.++|+ .+.++ .+...+++|+++. +++++++
T Consensus 298 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv-~v~~g~~f~~~~~iRis~~---~~~~~i~ 372 (385)
T 1b5p_A 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGV-AVVPGTDFAAFGHVRLSYA---TSEENLR 372 (385)
T ss_dssp HHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTE-ECEESGGGTCTTEEEEECC---SCHHHHH
T ss_pred HHHHHHHHHHHHC-CCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCe-EEecccccCCCCeEEEEec---CCHHHHH
Confidence 8999999999887 777654443334444554211235678888887774 44433 2222468999763 6789999
Q ss_pred HHHHHHHHHHH
Q psy3048 339 FAWNEISHQSS 349 (367)
Q Consensus 339 ~li~~l~~~~~ 349 (367)
++++.|+++++
T Consensus 373 ~~l~~l~~~l~ 383 (385)
T 1b5p_A 373 KALERFARVLG 383 (385)
T ss_dssp HHHHHGGGGC-
T ss_pred HHHHHHHHHHh
Confidence 99998877643
No 115
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.79 E-value=1.3e-18 Score=166.42 Aligned_cols=257 Identities=10% Similarity=0.026 Sum_probs=168.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
-.|++++.+|.++...++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.| +++|+
T Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~l~ 198 (398)
T 3ele_A 125 DEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHT------RGVIINSPNNPSGTVYSEETIKKLS 198 (398)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTE------EEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCC------CEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 4677788899999999999999999999874 67999999999987644 47888899999999977 77777
Q ss_pred HHHhh------cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchh----hhhhcc
Q psy3048 107 PICQE------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANH----LTNTFF 175 (367)
Q Consensus 107 ~l~~~------~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~----~~~~~~ 175 (367)
++|++ ||+++++|++|+.+.+........ ......++++.+.+|+++ .+.++|+++.++... +...+.
T Consensus 199 ~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 277 (398)
T 3ele_A 199 DLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVC 277 (398)
T ss_dssp HHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG-GGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHH
T ss_pred HHHHhhhhccCCCeEEEEeccccccccCCCCcCCh-HhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHH
Confidence 99999 999999999998754422111110 111123688889999997 556789988765411 100000
Q ss_pred CCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHH
Q psy3048 176 TDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYL 255 (367)
Q Consensus 176 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 255 (367)
.+...... + . ...+...++...+.... ..
T Consensus 278 ---~~~~~~~~--------~----------------------------------~---~~~~~~~a~~~~l~~~~---~~ 306 (398)
T 3ele_A 278 ---GAGRALGY--------V----------------------------------C---APSLFQKMIVKCQGATG---DI 306 (398)
T ss_dssp ---HHHHHTTC--------C----------------------------------C---SCHHHHHHHTTCTTCCC---CH
T ss_pred ---HHhhhccc--------c----------------------------------C---CCHHHHHHHHHHhcCHH---HH
Confidence 00000000 0 0 00112222211111111 23
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEe-EECCeeEEEEEecCCCCCH
Q psy3048 256 RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKA-SFQGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~lRi~~~~~~~~~ 334 (367)
++..++++++.+.|+++ |+++..+.....+++.++.. ...++.+.|.++|+ .+.++ .+..+.++|+++. +++
T Consensus 307 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi-~v~~g~~~~~~~~iRis~~---~~~ 379 (398)
T 3ele_A 307 NAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALED--DSNAFCEKAKEEDV-LIVAADGFGCPGWVRISYC---VDR 379 (398)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSS--CHHHHHHHHHTTTE-ECEESGGGTCTTEEEEECC---SCH
T ss_pred HHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCC--CHHHHHHHHHHCCE-EEeCccccCCCCeEEEEec---CCH
Confidence 45667778888888776 77776554434466776542 36688888888885 44433 2233569999763 589
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy3048 335 CDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 335 edid~li~~l~~~~~~~~ 352 (367)
+|+++++++|+++++++.
T Consensus 380 e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 380 EMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999988764
No 116
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.79 E-value=6.7e-19 Score=166.98 Aligned_cols=248 Identities=8% Similarity=0.026 Sum_probs=166.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.+|.++...++..|++++.++ +|+++|++++++.+ .+|++++++|++|.+.|++ |.++|
T Consensus 113 gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~-l~~~~ 179 (370)
T 2z61_A 113 GDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSDKT------KAIIINSPSNPLGEVIDRE-IYEFA 179 (370)
T ss_dssp TCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCSSE------EEEEEESSCTTTCCCCCHH-HHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcccCc------eEEEEcCCCCCcCcccCHH-HHHHH
Confidence 34677788999999999999999998887 69999999886533 4777889999999999999 99999
Q ss_pred hhcCcEEEEecccccccccChhhh-hhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+.+...... ..+.+....|+++.+.||+++.| ..+|+++.++ +...........+.
T Consensus 180 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~------ 252 (370)
T 2z61_A 180 YENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND-EIIEAILKLQQNLF------ 252 (370)
T ss_dssp HHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHHHHHHHT------
T ss_pred HHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-HHHHHHHHHHhhcc------
Confidence 999999999999987654211000 01111224589999999999633 3388888754 32221100000000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY---GLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~g~~~~~~~~~~la~~ 264 (367)
++ . ..+...++...+ +.+.+++..++..++.++
T Consensus 253 --------------------------------------~~---~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 288 (370)
T 2z61_A 253 --------------------------------------IS---A---PTISQYAALKAFEKETEREINSMIKEFDRRRRL 288 (370)
T ss_dssp --------------------------------------SS---S---CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------cC---C---CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 00 0 012222222222 355677888889999999
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-EC--CeeEEEEEecCCCCCHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-FQ--GRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~edid~l 340 (367)
+.+.|+++ |+++..+.....+.+.++. ...++.+.|. ++|+ .+.+.. +. +..++|+++. +++++++++
T Consensus 289 l~~~L~~~-g~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~gi-~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~ 360 (370)
T 2z61_A 289 VLKYVKDF-GWEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFV-ALTPGIGFGSKGKNYIRISYA---NSYENIKEG 360 (370)
T ss_dssp HHHHHHHT-TCBCCCCCBTTEECCBCSS---CHHHHHHHHHHHHCE-ECEEGGGGCGGGSSBEEEECC---SCHHHHHHH
T ss_pred HHHHHHHc-CCeecCCCcceEEEEecCC---CHHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEEe---CCHHHHHHH
Confidence 99999887 7776544332334445542 3567888887 5674 444332 11 2568999764 589999999
Q ss_pred HHHHHHHHH
Q psy3048 341 WNEISHQSS 349 (367)
Q Consensus 341 i~~l~~~~~ 349 (367)
++.|+++++
T Consensus 361 ~~~l~~~l~ 369 (370)
T 2z61_A 361 LERIKEFLN 369 (370)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999988754
No 117
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.79 E-value=7.9e-18 Score=165.21 Aligned_cols=263 Identities=12% Similarity=0.056 Sum_probs=156.7
Q ss_pred CceEEEecCCcchhHHH--------HHHhCCcceE--EEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 29 SRLVAYASDQSNSSVEK--------SAIIGDVPVR--QLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~--------~~~~~g~~v~--~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.-.|++++..|.+... .+...|..++ .++++ +++.+|+++|++++++.. |.+|+++.++ .|
T Consensus 143 pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~-----~klIi~~~s~--~~ 215 (490)
T 2a7v_A 143 PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIAGTSA--YA 215 (490)
T ss_dssp SCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHC-----CSEEEECCSS--CC
T ss_pred CCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcC-----CcEEEEcCCC--CC
Confidence 34466777777654211 2345565443 44444 468999999999997532 3466555433 46
Q ss_pred ccCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchh--------
Q psy3048 98 AFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANH-------- 169 (367)
Q Consensus 98 ~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~-------- 169 (367)
...|+++|+++|++||+++++|+||+.+.+..+..... +..+|++++++||+|.+|.| |+++.++...
T Consensus 216 ~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~---~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~ 291 (490)
T 2a7v_A 216 RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP---FKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGR 291 (490)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCG---GGTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEE
T ss_pred CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCC---CCCCCEEEECCcccCccccc-hheeeccchhcccccccc
Confidence 67899999999999999999999997654432211111 12469999999999988876 8888765310
Q ss_pred -----hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccc-cHHHHHHHH
Q psy3048 170 -----LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRF-RALKLWMTL 243 (367)
Q Consensus 170 -----~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 243 (367)
+.+.+ ...++.+. ++++.. ...++.+++
T Consensus 292 ~~~~~l~~~i---~~~~~~g~-------------------------------------------qggp~~~~iaAla~Al 325 (490)
T 2a7v_A 292 EIPYTFEDRI---NFAVFPSL-------------------------------------------QGGPHNHAIAAVAVAL 325 (490)
T ss_dssp EEECCCHHHH---HHHHTTTT-------------------------------------------CCSCCHHHHHHHHHHH
T ss_pred hhhHHHHHHH---HHHhcccC-------------------------------------------CCCchHHHHHHHHHHH
Confidence 00000 00011100 011111 123334455
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-----
Q psy3048 244 RSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF----- 317 (367)
Q Consensus 244 ~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----- 317 (367)
.....+.++++.++..++++++.+.|++. |++++.+ ...+++.+.+........++.+.|.+.|+ .+.....
T Consensus 326 ~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI-~v~~~~~p~d~~ 403 (490)
T 2a7v_A 326 KQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSI-TANKNTCPGDRS 403 (490)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTE-ECEEECCTTCCC
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCe-EEecCccCCCCC
Confidence 55444566888889999999999999986 9998753 35677777775432235677778877774 4443211
Q ss_pred -CCeeEEEEEe---cCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 318 -QGRPFLRFVV---TSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 318 -~~~~~lRi~~---~~~~~~~edid~li~~l~~~~~~ 350 (367)
..+..+|++. ++...+++|++++++.|.++++.
T Consensus 404 p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 404 AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 1245799954 23456899999999999988764
No 118
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.79 E-value=8.1e-19 Score=168.76 Aligned_cols=259 Identities=9% Similarity=-0.032 Sum_probs=170.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
-.|++++.+|.++...++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.| +++|+
T Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~~~~~~l~~l~ 207 (404)
T 2o1b_A 134 DYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKT------KLIYLTYPNNPTGSTATKEVFDEAI 207 (404)
T ss_dssp CEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHE------EEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCc------eEEEEcCCCCCCCccCCHHHHHHHH
Confidence 4566778899999999999999999999875 56689999999997654 47777889999999964 78999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhh-hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|++||+++++|++|+.+.+....... ...+....++++.+.+|+++.| ..+|+++.+ ++......... .+..
T Consensus 208 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~-~~~~-- 283 (404)
T 2o1b_A 208 AKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQALKKYQ-THTN-- 283 (404)
T ss_dssp HHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHH-HHHC--
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHHHHHHHH-hhcc--
Confidence 9999999999999999875432110000 0000112378899999999743 457888764 33332211000 0000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
++ ...+....+..+++. +.+.+++..++..++.++
T Consensus 284 -----------------------------------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~ 318 (404)
T 2o1b_A 284 -----------------------------------------AG---MFGALQDAAIYALNH-YDDFLEEQSNVFKTRRDR 318 (404)
T ss_dssp -----------------------------------------CC---CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CC---CCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Confidence 00 000111222333333 245678888888999999
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-EC--CeeEEEEEecCCCCCHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-FQ--GRPFLRFVVTSPETNQCDVAFA 340 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~edid~l 340 (367)
+.+.|+++ |+++..+.....++++++. .....++.++|.+ .|+ .+.++. +. +..++|+++.. ++++++.+
T Consensus 319 l~~~L~~~-g~~~~~~~~g~~~~~~~~~-~~~~~~l~~~l~~~~gi-~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~ 392 (404)
T 2o1b_A 319 FEAMLAKA-DLPFVHAKGGIYVWLETPP-GYDSEQFEQFLVQEKSI-LVAPGKPFGENGNRYVRISLAL---DDQKLDEA 392 (404)
T ss_dssp HHHHHHHT-TCCEECCCBSSEEEEECCT-TCCHHHHHHHHHHHHCE-ECEESGGGCGGGTTEEEEECCS---CTTHHHHH
T ss_pred HHHHHHhc-CCeecCCCcceEEEEeCCC-CCCHHHHHHHHHHHCCE-EEeCchhhCcCCCCeEEEEEcC---CHHHHHHH
Confidence 99999887 7877644332346666653 2234678888774 574 444432 11 24689997643 67899999
Q ss_pred HHHHHHHHHH
Q psy3048 341 WNEISHQSSE 350 (367)
Q Consensus 341 i~~l~~~~~~ 350 (367)
++.|++++++
T Consensus 393 l~~l~~~l~~ 402 (404)
T 2o1b_A 393 AIRLTELAYL 402 (404)
T ss_dssp HHHHHGGGGG
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 119
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.79 E-value=9.7e-19 Score=169.27 Aligned_cols=258 Identities=11% Similarity=0.011 Sum_probs=173.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC----------CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~----------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
-.|++++.+|.++...++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|.+.
T Consensus 126 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~ 199 (429)
T 1yiz_A 126 DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT------KMIIINTPHNPLGKVM 199 (429)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTE------EEEEEESSCTTTCCCC
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCc------eEEEECCCCCCCCccC
Confidence 4567777899999999999999999999864 46799999999986443 5777889999999997
Q ss_pred C---hhhHHHHHhhcCcEEEEecccccccccChhhh-h-hhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhh
Q psy3048 101 N---LEELGPICQEYNIWLHVDAAYAGSALLLPEYA-H-LKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNT 173 (367)
Q Consensus 101 d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~ 173 (367)
| +++|+++|++||+++++|++|+.+.+...... . .+.+....|+++.+.+|+++ ++| +|+++.++ +.....
T Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~-~~G~r~G~~~~~~-~~~~~l 277 (429)
T 1yiz_A 200 DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFS-LTGWKIGWAYGPE-ALLKNL 277 (429)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHT-CGGGCCEEEESCH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccC-CCCcceEEEEeCH-HHHHHH
Confidence 4 99999999999999999999987544221100 0 01112235899999999887 335 89888753 333221
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh----h--
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY----G-- 247 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-- 247 (367)
... ..+. .+ + ...+....+..+++.. +
T Consensus 278 ~~~-~~~~------------~~-------------------------------~---~~~~~~~a~~~~l~~~~~~~~~~ 310 (429)
T 1yiz_A 278 QMV-HQNC------------VY-------------------------------T---CATPIQEAIAVGFETELKRLKSP 310 (429)
T ss_dssp HHH-HHTT------------TC-------------------------------C---CCHHHHHHHHHHHHHHHTTTTST
T ss_pred HHH-Hhhc------------cc-------------------------------C---CChHHHHHHHHHHhcccccccch
Confidence 100 0000 00 0 0001122333444431 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc-----------hHHHHHHHHHh-ccCcEEEEEe
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN-----------DLTNQLYERLM-SHKQIYIIKA 315 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----------~~~~~l~~~L~-~~g~~~~~~~ 315 (367)
.+.+++..++..++++++.+.|+++ |+++..+.....++++++... ....++.++|. ++|+ .+.++
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv-~v~~g 388 (429)
T 1yiz_A 311 ECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGL-QGIPP 388 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSE-ECBCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCE-EEeCc
Confidence 4457888888899999999999887 788765544456777775420 23567888886 5674 44432
Q ss_pred -EEC-------CeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 316 -SFQ-------GRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 316 -~~~-------~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
.+. +..++|+++. ++++||++++++|++++
T Consensus 389 ~~f~~~~~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 389 SAFYSEPNKHLGEDFVRYCFF---KKDENLQKAAEILRKWK 426 (429)
T ss_dssp GGGSCGGGGGGTTTEEEEECC---SCHHHHHHHHHHHHHHS
T ss_pred hHhCCCcccCCCCCeEEEEec---CCHHHHHHHHHHHHHhc
Confidence 121 1469999764 37999999999998874
No 120
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.79 E-value=2.6e-18 Score=164.13 Aligned_cols=256 Identities=13% Similarity=0.011 Sum_probs=169.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|+++..+|.++...++..|++++.++.+. ++.+|+++|+++ . +.+|++++++|++|.+.| +++|
T Consensus 116 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~~~~~l~~l 186 (391)
T 3h14_A 116 DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTMLDHAAMGAL 186 (391)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccCCHHHHHHH
Confidence 4566778899999999999999999999874 357899999877 2 247888899999999977 8999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
+++|++||+++++|++|+.+.+....... ......++++.+.+|+++ .+.++|+++.+++ ....... .....
T Consensus 187 ~~~~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~----~~~~~ 259 (391)
T 3h14_A 187 IEAAQAQGASFISDEIYHGIEYEAKAVTA--LELTDECYVINSFSKYFSMTGWRVGWMVVPED-QVRVVER----IAQNM 259 (391)
T ss_dssp HHHHHHTTCEEEEECTTTTCBSSSCCCCG--GGTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GHHHHHH----HHHHT
T ss_pred HHHHHHcCCEEEEECcchhcccCCCCcCh--hhcCCCEEEEEechhccCCccceeEEEEeCHH-HHHHHHH----HHhhh
Confidence 99999999999999999875542211100 111223677778999996 4566788777432 2221100 00000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
.. ....+....+.+++. ..+.+++..++..++.++
T Consensus 260 ------------------------------------------~~-~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~ 294 (391)
T 3h14_A 260 ------------------------------------------FI-CAPHASQVAALAALD--CDAELQANLDVYKANRKL 294 (391)
T ss_dssp ------------------------------------------TC-CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cc-CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHH
Confidence 00 000011122223333 456788888899999999
Q ss_pred HHHHhcCCCCeEEeCCCCc-eeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE----CCeeEEEEEecCCCCCHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSM-GLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF----QGRPFLRFVVTSPETNQCDVA 338 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~-~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----~~~~~lRi~~~~~~~~~edid 338 (367)
+.+.|+++ ++....++.. ..+.+.++.......++.+.|.++ | +.+.++.. .+..++|+++.. +++|++
T Consensus 295 l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~~iRis~~~---~~~~i~ 369 (391)
T 3h14_A 295 MLERLPKA-GFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAG-VAVTPGLDFDPERGAGTLRFSYAR---ATADIE 369 (391)
T ss_dssp HHHHHHHH-TCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHC-EECEEGGGTCTTTGGGEEEEECCS---CHHHHH
T ss_pred HHHHHHHc-CCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCC-EEEcCchhhCCCCCCCeEEEEecC---CHHHHH
Confidence 99999887 4444333433 445555643223356888888776 7 44544322 235799997643 689999
Q ss_pred HHHHHHHHHHHHhh
Q psy3048 339 FAWNEISHQSSEMN 352 (367)
Q Consensus 339 ~li~~l~~~~~~~~ 352 (367)
.++++|++++++..
T Consensus 370 ~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 370 EGLDRLEAFMQARG 383 (391)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988654
No 121
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.79 E-value=8.3e-19 Score=168.21 Aligned_cols=260 Identities=10% Similarity=-0.017 Sum_probs=166.0
Q ss_pred EEecCCcchh-HHHHHHhC--CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 33 AYASDQSNSS-VEKSAIIG--DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 33 v~~s~~~H~s-~~~~~~~~--g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
+.++...|.. +...+... |++++.|+.+++...+. + +.+. +.+|++++++|++|.+.|+++|.++
T Consensus 123 ~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-~----i~~~------~~~v~~~~~~nptG~~~~~~~i~~~- 190 (398)
T 2fyf_A 123 LHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-Q----TDPS------VDVIAWAHNETSTGVAVAVRRPEGS- 190 (398)
T ss_dssp EEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-C----CCTT------CSEEEEESEETTTTEECCCCCCTTC-
T ss_pred EEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-c----ccCC------CCEEEEeCcCCCcceecchHHhhhh-
Confidence 3345555532 22234445 88999999874333332 1 2222 3578888999999999999999998
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhcc------CCcccccc
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFF------TDRVYLKH 183 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~------~~~~yl~~ 183 (367)
+|+++++|++|+.+....+ +..+|++++++||+++.|.|+|+++.+++ .+..... ..++|+..
T Consensus 191 --~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~ 259 (398)
T 2fyf_A 191 --DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLAIMSPA-ALSRIEAIAATGRWVPDFLSL 259 (398)
T ss_dssp --C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEEEECHH-HHHHHHHHHHTTCCCCGGGCH
T ss_pred --cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEEEECHH-HHHHhhcccccCCCCCcEEeh
Confidence 8999999999987654322 11359999999999998877888887543 3322110 00122211
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLA 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la 262 (367)
+.. ..+ +.. .+...........++.++++.+...| ++++.++..+++
T Consensus 260 ~~~-----------~~~-----------~~~----------~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 260 PIA-----------VEN-----------SLK----------NQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp HHH-----------HHH-----------HTT----------TCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHH-----------hhh-----------ccc----------CCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 100 000 000 00000011112345566676666666 899999999999
Q ss_pred HHHHHHhcCCCCeEEeC-CC--Cce-eEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHH
Q psy3048 263 KKFADLVEKDDRFELVC-PP--SMG-LVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDV 337 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~-~~--~~~-~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edi 337 (367)
+++.+.|++++|+++.. +| ..+ .++|+++. .....++.+.|.++|+. +.+.. ..+..++|+++ ..+++++|+
T Consensus 308 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~-v~~g~~~~~~~~iRis~-~~~~t~e~i 384 (398)
T 2fyf_A 308 QRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD-DVDAGTVAKILRANGIV-DTEPYRKLGRNQLRVAM-FPAVEPDDV 384 (398)
T ss_dssp HHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT-TSCHHHHHHHHHHTTCB-CCSCCTTTCSSEEEEEC-CTTSCHHHH
T ss_pred HHHHHHHHHcCCceeccCChhhcCCcEEEEECCC-CCCHHHHHHHHHHCCcE-EecCcccCCCCEEEEEe-cCCCCHHHH
Confidence 99999999988999874 23 355 78888853 22357899999988854 32221 11246899976 568899999
Q ss_pred HHHHHHHHHHHHH
Q psy3048 338 AFAWNEISHQSSE 350 (367)
Q Consensus 338 d~li~~l~~~~~~ 350 (367)
++++++|++++++
T Consensus 385 ~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 385 SALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 122
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=9.1e-18 Score=161.46 Aligned_cols=262 Identities=11% Similarity=0.032 Sum_probs=161.4
Q ss_pred ceEEEecCCcchhHHH---HHHhCC--cceEEEecCCCCCcCHHHHHHHHHH-HhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSSVEK---SAIIGD--VPVRQLRSDDNGVLRGDALLTAVKE-DLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~---~~~~~g--~~v~~v~~~~~~~~d~~~L~~~l~~-~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.-.|++++.+|.+... .....| ..++.++.++++.+|+++|++++++ .+ .+|++++++ .|.+.|++
T Consensus 111 gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~------~~v~~~~~~--~G~~~~l~ 182 (417)
T 3n0l_A 111 GDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKP------KLIVCGASA--YARVIDFA 182 (417)
T ss_dssp TCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCC------SEEEECCSS--CCSCCCHH
T ss_pred CCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCC------eEEEECCcc--cCccCCHH
Confidence 3456677788877544 333334 4455566667788999999999984 33 366666655 39999999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|.++|++||+++++|++|+.+....+.... .+..+|+++.++||++.+|.| |+++.+++........ ....
T Consensus 183 ~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~----~~~~ 254 (417)
T 3n0l_A 183 KFREIADEIGAYLFADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINS----AIFP 254 (417)
T ss_dssp HHHHHHHHHTCEEEEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHH----HHTT
T ss_pred HHHHHHHHcCCEEEEECccchhhhhcccCCC---ccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhh----hhCC
Confidence 9999999999999999998765443222111 122459999999999977764 8887764443322110 0000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
... ..+ ......++.+++.....++++++.++..++++
T Consensus 255 ~~~----~~~--------------------------------------~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~ 292 (417)
T 3n0l_A 255 GIQ----GGP--------------------------------------LMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQ 292 (417)
T ss_dssp TTC----SSC--------------------------------------CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred ccc----CCc--------------------------------------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 000 000 00112333444554445677888999999999
Q ss_pred HHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-------CCeeEEEEEec---CCCC
Q psy3048 264 KFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-------QGRPFLRFVVT---SPET 332 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-------~~~~~lRi~~~---~~~~ 332 (367)
++.+.|++ .|+++..+ ...+.+.+.+.+.......+.+.|.+.|+ .+.+... .....+|++.. ....
T Consensus 293 ~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 370 (417)
T 3n0l_A 293 VLANVLMD-RKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGI-TANKNTVPGEIRSPFITSGLRLGTPALTARGF 370 (417)
T ss_dssp HHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTE-ECEECCCTTCCSCTTTCSEEEEECHHHHHTTC
T ss_pred HHHHHHHh-CCceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCe-EEeccccCCCCcccCCCCeeEecCHHHhhCCC
Confidence 99999988 58887652 34456666664322235677777877784 4432211 12356999652 2235
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy3048 333 NQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~~ 351 (367)
+++|++++++.|++++++.
T Consensus 371 ~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 371 KEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 7899999999999988753
No 123
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.79 E-value=3.4e-18 Score=161.87 Aligned_cols=251 Identities=12% Similarity=0.072 Sum_probs=164.8
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcC-HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLR-GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d-~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~ 107 (367)
.|++.+.+|.++...++..|++++.++.+.+..++ ++++.+++.+. +.+|++++++|++|.+.| +++|++
T Consensus 100 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~ 173 (364)
T 1lc5_A 100 RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD------LDCLFLCTPNNPTGLLPERPLLQAIAD 173 (364)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred eEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccCC------CCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 56667789999999999999999999986422233 34444444222 246778899999999988 999999
Q ss_pred HHhhcCcEEEEecccccccccC-hhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCC
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLL-PEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
+|++||+++++|++|+.+.+.. +... ..+....++++.+.||+++.| ..+|++++.+++...........
T Consensus 174 ~~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~------ 245 (364)
T 1lc5_A 174 RCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP------ 245 (364)
T ss_dssp HHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT------
T ss_pred HhhhcCcEEEEECcChhhccCccchhh--HhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC------
Confidence 9999999999999998754321 1111 011123478899999999744 45788883344433321100000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHHHHHHHHHHHHHHHH
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKGLQAYLRKHISLAKK 264 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~~~~la~~ 264 (367)
+ + ...+...++...+. .+.+++..++..+++++
T Consensus 246 ---------~-------------------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 279 (364)
T 1lc5_A 246 ---------W-------------------------------S------VNALAALAGEVALQDSAWQQATWHWLREEGAR 279 (364)
T ss_dssp ---------T-------------------------------C------SCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHH
T ss_pred ---------C-------------------------------C------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 0 0 01123333333332 24577888888899999
Q ss_pred HHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-E--CCeeEEEEEecCCCCCHHHHHHHH
Q psy3048 265 FADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-F--QGRPFLRFVVTSPETNQCDVAFAW 341 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~--~~~~~lRi~~~~~~~~~edid~li 341 (367)
+.+.|+++||+++. ++..+.+.+.++. . ..++.+.|.++|+ .+.+.. + .+..++|+++. +++|+++++
T Consensus 280 l~~~L~~~~~~~~~-~~~g~~~~~~~~~-~--~~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~ 350 (364)
T 1lc5_A 280 FYQALCQLPLLTVY-PGRANYLLLRCER-E--DIDLQRRLLTQRI-LIRSCANYPGLDSRYYRVAIR----SAAQNERLL 350 (364)
T ss_dssp HHHHHHTSTTEEEC-CCSSSEEEEEESC-T--TCCHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHH
T ss_pred HHHHHhcCCCCEEC-CCCCeEEEEECCC-c--HHHHHHHHHHCCc-EEeeCcccCCCCCCEEEEEeC----CHHHHHHHH
Confidence 99999998899875 4555667777753 2 3468888888874 444432 2 12469999753 589999999
Q ss_pred HHHHHHHHHh
Q psy3048 342 NEISHQSSEM 351 (367)
Q Consensus 342 ~~l~~~~~~~ 351 (367)
++|+++++++
T Consensus 351 ~~l~~~~~~~ 360 (364)
T 1lc5_A 351 AALRNVLTGI 360 (364)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHhhcc
Confidence 9999987654
No 124
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.3e-18 Score=167.59 Aligned_cols=263 Identities=11% Similarity=0.026 Sum_probs=171.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~ 104 (367)
.-.|++++.+|.++...++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.| +++
T Consensus 123 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~l~~p~nptG~~~~~~~l~~ 196 (412)
T 2x5d_A 123 GDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP------RMMILGFPSNPTAQCVELDFFER 196 (412)
T ss_dssp TCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCC------SEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCc------eEEEECCCCCCCCCcCCHHHHHH
Confidence 34677778899999999999999999999875 34578999998886433 36777899999999865 688
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhh--hhhCCCCCcceeeecccccccc-CCcceeEEEecchhhhhhccCCcccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~--~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
|+++|++||+++++|++|+.+.+...... ..+.+....|+++.+.||+++. +..+|+++.+ ++....... ...+.
T Consensus 197 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~-~~~~~ 274 (412)
T 2x5d_A 197 VVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELVSALAR-IKSYH 274 (412)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHHHHHHH-HHHHH
T ss_pred HHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHHHHHHH-HHhhh
Confidence 99999999999999999987654221100 0011112348899999999973 3457998874 333322110 00000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
. ++ ...+....+..++.. +.+.+++..++..++
T Consensus 275 ~-------------------------------------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 275 D-------------------------------------------YG---TFTPLQVAAIAALEG-DQQCVRDIARQYQQR 307 (412)
T ss_dssp C-------------------------------------------CC---CCHHHHHHHHHHHHS-CSHHHHHHHHHHHHH
T ss_pred c-------------------------------------------cC---CCHHHHHHHHHHHhC-CHHHHHHHHHHHHHH
Confidence 0 00 000111222333332 245678888889999
Q ss_pred HHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc--hHHHHHHHHHhc-cCcEEEEEeEE-C--CeeEEEEEecCCCCCHH
Q psy3048 262 AKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN--DLTNQLYERLMS-HKQIYIIKASF-Q--GRPFLRFVVTSPETNQC 335 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~--~~~~~l~~~L~~-~g~~~~~~~~~-~--~~~~lRi~~~~~~~~~e 335 (367)
++++.+.|+++ |+++..+.....++++++... ....++.+.|.+ .|+ .+.++.. . +..++|+++.. +++
T Consensus 308 ~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~f~~~~~~~iRis~~~---~~~ 382 (412)
T 2x5d_A 308 RDVLVKGLREA-GWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKV-SVSPGIGFGDYGDDHVRFALIE---NRD 382 (412)
T ss_dssp HHHHHHHHHHH-TCCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEECCS---CHH
T ss_pred HHHHHHHHHHC-CCEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCE-EEeCchhhCCCCCCeEEEEecC---CHH
Confidence 99999999887 777654332334666764311 035678888865 574 4443321 1 24689997643 799
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy3048 336 DVAFAWNEISHQSSEMN 352 (367)
Q Consensus 336 did~li~~l~~~~~~~~ 352 (367)
+++.+++.|+++++++.
T Consensus 383 ~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 383 RLRQAVRGIKAMFRADG 399 (412)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999988754
No 125
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.78 E-value=8.3e-18 Score=162.65 Aligned_cols=264 Identities=11% Similarity=-0.002 Sum_probs=170.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
-.|++++.+|.+...++...|++++.+++++ ++.+|+++|++++++.+ .+|+++ +++|.+.|+++|.++|
T Consensus 91 d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~------~~v~~~---~~tG~~~~l~~i~~la 161 (424)
T 2po3_A 91 GEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRT------SAVVGV---HLWGRPCAADQLRKVA 161 (424)
T ss_dssp SEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTE------EEEEEE---CGGGCCCCHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCC------cEEEEE---CCCCCcCCHHHHHHHH
Confidence 4577788999999999999999999999875 78899999999886543 355555 3799999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccc--cccccCCcceeEEEecchhhhhhccCCccccccCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAH--KWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAP 187 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 187 (367)
++||+++++|++|+.+...... . +. ...|+++.+.| |++.+ ..+|+++.++++....... +......
T Consensus 162 ~~~~~~li~Dea~~~g~~~~~~--~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~----~~~~~~~- 230 (424)
T 2po3_A 162 DEHGLRLYFDAAHALGCAVDGR--P-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRA----LHNFGFD- 230 (424)
T ss_dssp HHTTCEEEEECTTCTTCEETTE--E-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHH----HHBTTTT-
T ss_pred HHcCCEEEEECccccCCeECCe--e-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHH----HHhcCcc-
Confidence 9999999999999843332111 1 11 12377777766 98875 5677777754443332210 0000000
Q ss_pred CCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy3048 188 MNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFAD 267 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~ 267 (367)
..... . ......++..+....++. ..++++++.++..++++++.+
T Consensus 231 ---~~~~~----------------------------~--~~g~~~~~~~~~aa~~l~--~~~~~~~~~~~~~~~~~~l~~ 275 (424)
T 2po3_A 231 ---LPGGS----------------------------P--AGGTNAKMSEAAAAMGLT--SLDAFPEVIDRNRRNHAAYRE 275 (424)
T ss_dssp ---CTTCC----------------------------T--TCCCBCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccc----------------------------c--ccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 000000122233333332 345678888899999999999
Q ss_pred HhcCCCCeEEeCCC-C----ceeEEEEEcCC--chHHHHHHHHHhccCcEEEEEeEECC---------------ee----
Q psy3048 268 LVEKDDRFELVCPP-S----MGLVCFRLKGD--NDLTNQLYERLMSHKQIYIIKASFQG---------------RP---- 321 (367)
Q Consensus 268 ~L~~~~g~~~~~~~-~----~~~v~f~~~~~--~~~~~~l~~~L~~~g~~~~~~~~~~~---------------~~---- 321 (367)
.|++++|+++..++ . ..++.+.++.. .....++.+.|.++|+ .+.+..... +.
T Consensus 276 ~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI-~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~ 354 (424)
T 2po3_A 276 HLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGV-HTRAYFSPGCHELEPYRGQPHAPLPHTERL 354 (424)
T ss_dssp HTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTE-ECBCTTCSCGGGSTTTTTSCCCCCHHHHHH
T ss_pred HhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCC-ceecccCCccccchhhhhcCCCCChhHHHH
Confidence 99999899887632 1 24555666420 1125678888888884 333211000 11
Q ss_pred ---EEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 322 ---FLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 322 ---~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.+|++ .+.+++++|+++++++|++++++.
T Consensus 355 ~~~~l~l~-~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 355 AARVLSLP-TGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HTTEEEEC-CSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hcCEEEee-CCCCCCHHHHHHHHHHHHHHHhhh
Confidence 27773 468889999999999999887653
No 126
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.78 E-value=5.3e-18 Score=162.09 Aligned_cols=271 Identities=12% Similarity=0.039 Sum_probs=164.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...+++..|++++.++++++ +.+|+++|++++++.+ .+|+++ +++|...|+++|.++
T Consensus 80 g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~~~---~~~g~~~~~~~i~~l 150 (390)
T 3b8x_A 80 GDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDST------KAILTV---NLLGNPNNFDEINKI 150 (390)
T ss_dssp TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTE------EEEEEE---CGGGCCCCHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCC------eEEEEE---CCccChhhHHHHHHH
Confidence 446788899999999999999999999999765 8999999999997644 366665 367999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCC-CCcceeeeccccccccCCcceeEEEecchhhhhhccCC-ccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD-RVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~yl~~~~~ 186 (367)
|++||+++|+|++|+.+...... ..+. ....+++..+.|.+.+|.| |+++.+++.......... ..+......
T Consensus 151 ~~~~~~~li~D~a~~~g~~~~~~----~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~ 225 (390)
T 3b8x_A 151 IGGRDIILLEDNCESMGATFNNK----CAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPK 225 (390)
T ss_dssp HTTSCCEEEEECTTCTTCEETTE----ETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCS
T ss_pred HHHcCCEEEEECcCcccCEECCc----ccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccc
Confidence 99999999999999865443211 1121 1123344334444555555 777776544322111000 000000000
Q ss_pred C---C-CCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc--ccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 187 P---M-NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR--FRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 187 ~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
. . ......+ ..+ ..+.. .+.+ ...+....++.. .+.++++.++..+
T Consensus 226 ~~~~~~~~~~~~~----------~~~---------------~~~~~-~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~ 277 (390)
T 3b8x_A 226 KNKVTGVKSDDQF----------EES---------------FKFVL-PGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRK 277 (390)
T ss_dssp EETTTEECCSCTT----------TSS---------------SCBCS-CCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred ccccccccccccc----------ccc---------------cceec-cccccCcCHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 0 0 0000000 000 00000 0101 122333333333 3567888999999
Q ss_pred HHHHHHHHhcCCCCeEEeCCC-Ccee--EEEEEcCC-chHHHHHHHHHhccCcEEEEE----e---E-E--C-------C
Q psy3048 261 LAKKFADLVEKDDRFELVCPP-SMGL--VCFRLKGD-NDLTNQLYERLMSHKQIYIIK----A---S-F--Q-------G 319 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~-~~~~--v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~----~---~-~--~-------~ 319 (367)
+++++.+.|++++|+++..++ ..+. +.+.++.. .....++.+.|.++|+. +.. . . . . .
T Consensus 278 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~ 356 (390)
T 3b8x_A 278 NAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIE-CRPIVTGNFLKNTDVLKYFDYTVHN 356 (390)
T ss_dssp HHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBC-CBCSTTSSGGGCHHHHTTCEEEESS
T ss_pred HHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCC-eeeecCCchhhcchhhhcCCCCCcC
Confidence 999999999999999886543 2332 44455421 12356788888888743 221 0 0 0 0 0
Q ss_pred ---------eeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 320 ---------RPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 320 ---------~~~lRi~~~~~~~~~edid~li~~l 344 (367)
...+|++ .++++|++||++++++|
T Consensus 357 ~~~~~~~~~~~~l~l~-~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 357 NVDNAEYLDKNGLFVG-NHQIELFDEIDYLREVL 389 (390)
T ss_dssp CCHHHHHHHHHEEEEE-CCSSCCHHHHHHHHHHT
T ss_pred CChHHHHHhcCEEEee-CCCCCCHHHHHHHHHhh
Confidence 1369995 57899999999999886
No 127
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.78 E-value=1.9e-18 Score=161.37 Aligned_cols=122 Identities=15% Similarity=0.065 Sum_probs=97.1
Q ss_pred eEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++.+|.+....+ ...|++++.++. .|+++|++++++.+ .+|++++++|++|.+.|+++|.
T Consensus 38 ~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~~~i~ 106 (331)
T 1pff_A 38 DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPGNIEKHLKPNT------RIVYFETPANPTLKVIDIEDAV 106 (331)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTTHHHHTCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHhhcCCC------eEEEEECCCCCcCcccCHHHHH
Confidence 45777888999987765 347999998876 38889998887544 5888899999999999999999
Q ss_pred HHHhh-cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhh
Q psy3048 107 PICQE-YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHL 170 (367)
Q Consensus 107 ~l~~~-~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~ 170 (367)
++|++ ||+++++|++|+.+.+..+. . .+ .|+++.++||++++|.+ +|+++.++++..
T Consensus 107 ~~~~~~~~~~li~D~a~~~~~~~~~~-~---~~---~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~ 166 (331)
T 1pff_A 107 KQARKQKDILVIVDNTFASPILTNPL-D---LG---VDIVVHSATKYINGHTDVVAGLVCSRADIIA 166 (331)
T ss_dssp HHHTTSSSCEEEEECTTTHHHHCCGG-G---GT---CSEEEEETTTTTSSSSSCCCEEEEECHHHHH
T ss_pred HHHhhhcCCEEEEECCCcccccCChh-h---cC---CcEEEEECccccCCCCCceEEEEEeCcHHHH
Confidence 99999 99999999999876553221 1 12 49999999999998876 788877652433
No 128
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.78 E-value=4.3e-17 Score=155.64 Aligned_cols=243 Identities=16% Similarity=0.139 Sum_probs=162.3
Q ss_pred ceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+-.|++++.+|.++... ++..|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 91 g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i 159 (386)
T 1cs1_A 91 GDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-----DEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKI 159 (386)
T ss_dssp TCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT-----CHHHHHHHHHTCC------SEEEEECSCTTTCCCCCHHHH
T ss_pred CCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-----CHHHHHHhhccCC------cEEEEeCCCCCCCcccCHHHH
Confidence 34567778899886654 35678999988864 8999999998654 478889999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc--eeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC--SAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
.++|++||+++++|++|+.+.+..+. . . ..|+++.+.||++++|.+. |+++.++++....... +...
T Consensus 160 ~~l~~~~~~~li~De~~~~~~~~~~~-~---~---~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~----~~~~ 228 (386)
T 1cs1_A 160 CHLAREVGAVSVVDNTFLSPALQNPL-A---L---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW----WANN 228 (386)
T ss_dssp HHHHHHTTCEEEEECTTTCTTTCCGG-G---G---TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH----HHHH
T ss_pred HHHHHHcCCEEEEECCCcccccCCcc-c---c---CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH----HHHh
Confidence 99999999999999999877653221 1 1 2499999999999988764 8888865333322110 0000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+.. . ...+..++++.. .+.+.+..++..+.++
T Consensus 229 ------------------------------------------~~~-~---~~~~~~~~~~~~--l~~~~~~~~~~~~~~~ 260 (386)
T 1cs1_A 229 ------------------------------------------IGV-T---GGAFDSYLLLRG--LRTLVPRMELAQRNAQ 260 (386)
T ss_dssp ------------------------------------------HTC-B---CCHHHHHHHHHH--HTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cCC-C---CCHHHHHHHHhc--ccHHHHHHHHHHHHHH
Confidence 000 0 011222322222 2234556666777888
Q ss_pred HHHHHhcCCCCeEEe-CCC----------------CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--------
Q psy3048 264 KFADLVEKDDRFELV-CPP----------------SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ-------- 318 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~-~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-------- 318 (367)
++.+.|++++++.-. .+. ..+++.|.+.+ . ...+.+.|.+.|++ +.+....
T Consensus 261 ~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~gi~-~~~~~~g~~~sl~~~ 336 (386)
T 1cs1_A 261 AIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-D--EQTLRRFLGGLSLF-TLAESLGGVESLISH 336 (386)
T ss_dssp HHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-C--HHHHHHHHHTCSSS-EEBSCCCSSSCEEEE
T ss_pred HHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-C--HHHHHHHHHhCCcc-eEcccCCCcceeeec
Confidence 888888887766432 221 25778888764 2 45677778777753 3321010
Q ss_pred -------------------CeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 319 -------------------GRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 319 -------------------~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...++|+++. ..+++++++.+.++|+++
T Consensus 337 ~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 337 AATMTHAGMAPEARAAAGISETLLRISTG-IEDGEDLIADLENGFRAA 383 (386)
T ss_dssp GGGTTTTTSCHHHHHHHTCCTTEEEEECC-SSCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCHHHHHhcCCCCCeEEEEEc-cCCHHHHHHHHHHHHHHh
Confidence 1369999874 577788888888888765
No 129
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.78 E-value=1.2e-17 Score=162.42 Aligned_cols=245 Identities=14% Similarity=0.087 Sum_probs=163.0
Q ss_pred eEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+.... +...|+++++++.+ |+++|++++++++ +.+|++.+++|++|.+.|+++|+
T Consensus 154 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~ 223 (445)
T 1qgn_A 154 GHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-----DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVS 223 (445)
T ss_dssp CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHH
Confidence 3566677888887664 45579999999874 8999999998765 24888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC--cceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH--DCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++||+||+++++|++|+.+....+ . .. .+|+++.++||+++++. .+|+++.++ +.+.... .+...
T Consensus 224 ~la~~~g~~livD~a~~~~~~~~~-~-----~~-g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~----~~~~~- 290 (445)
T 1qgn_A 224 KLCHEKGALVCIDGTFATPLNQKA-L-----AL-GADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIR----NLHHI- 290 (445)
T ss_dssp HHHHHTTCEEEEECTTTCTTTCCT-T-----TT-TCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHH----HHHHH-
T ss_pred HHHHHcCCEEEEECCCcccccCCc-c-----cc-CCEEEEECCcccccccccceEEEEEECH-HHHHHHH----HHHHH-
Confidence 999999999999999986543221 1 11 35999999999998542 278877754 3332211 00000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
+. .....+..+..++ +.+.+..++++..+.+++
T Consensus 291 -----------------------------------------~g----~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~ 323 (445)
T 1qgn_A 291 -----------------------------------------LG----GALNPNAAYLIIR--GMKTLHLRVQQQNSTALR 323 (445)
T ss_dssp -----------------------------------------HC----CCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHH
T ss_pred -----------------------------------------hC----CCCCHHHHHHHHH--hHHHHHHHHHHHHHHHHH
Confidence 00 0001123333333 334456667777888999
Q ss_pred HHHHhcCCCCe-EEeCCC----------------CceeEEEEEcCCchHHHHHHHHHhccCc------EE---EEEeE--
Q psy3048 265 FADLVEKDDRF-ELVCPP----------------SMGLVCFRLKGDNDLTNQLYERLMSHKQ------IY---IIKAS-- 316 (367)
Q Consensus 265 l~~~L~~~~g~-~~~~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~------~~---~~~~~-- 316 (367)
+.+.|+++|++ .+..|. ..++++|.+++.......+.+.|...+. .. ..+..
T Consensus 324 l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~ 403 (445)
T 1qgn_A 324 MAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMS 403 (445)
T ss_dssp HHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHH
T ss_pred HHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccc
Confidence 99999999988 555441 3578899997632335567776642221 10 00000
Q ss_pred ----------EC--CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 317 ----------FQ--GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 317 ----------~~--~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.. ..+.+|+|+. .||+|.+++.|+++++.
T Consensus 404 h~~~~~~~~~~~g~~~~~iRlSvG-----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 404 YWDLSQSDRAKYGIMDNLVRFSFG-----VEDFDDLKADILQALDS 444 (445)
T ss_dssp STTSCHHHHHTTTCCSSEEEEECC-----SSCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHHHhh
Confidence 01 1469999764 46899999999998764
No 130
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.78 E-value=1.3e-17 Score=159.96 Aligned_cols=244 Identities=14% Similarity=0.105 Sum_probs=160.3
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++..|.+....+ ...|++++.++.+ |+++|++++++.+ .+|++.+++|++|.+.|+++|
T Consensus 105 gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i 173 (392)
T 3qhx_A 105 GDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRPTT------RLIWVETPTNPLLSIADIAGI 173 (392)
T ss_dssp TCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCCCC------eEEEEECCCCCCcEEecHHHH
Confidence 346777888998877665 5578999999875 8999999997655 488899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+++|++||+++|+|++|+.+... .... . .+|+++.+.||+++++.+ +|+++.+++........ +...
T Consensus 174 ~~la~~~g~~li~D~~~~~~~~~-~~~~---~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~----~~~~ 242 (392)
T 3qhx_A 174 AQLGADSSAKVLVDNTFASPALQ-QPLS---L---GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF----LQNG 242 (392)
T ss_dssp HHHHHHHTCEEEEECTTTCTTTC-CGGG---G---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH----HHHH
T ss_pred HHHHHHcCCEEEEECCCcccccC-ChHH---h---CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH----HHHh
Confidence 99999999999999999865332 2111 1 349999999999987643 77777765443322110 0000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+. .....+..+..++. .+.+..++++..++++
T Consensus 243 ------------------------------------------~g----~~~~~~~~~~~~~~--l~~l~~~~~~~~~~~~ 274 (392)
T 3qhx_A 243 ------------------------------------------AG----AVPGPFDAYLTMRG--LKTLVLRMQRHSENAA 274 (392)
T ss_dssp ------------------------------------------HC----CCCCHHHHHHHHHH--HTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cC----CCCCHHHHHHHHhh--hhHHHHHHHHHHHHHH
Confidence 00 00112333443332 3345667788889999
Q ss_pred HHHHHhcCCCCeEEeCCCC-----------------ceeEEEEEcCCchHHHHHHHHHhccCcEE---------EEEeEE
Q psy3048 264 KFADLVEKDDRFELVCPPS-----------------MGLVCFRLKGDNDLTNQLYERLMSHKQIY---------IIKASF 317 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~-----------------~~~v~f~~~~~~~~~~~l~~~L~~~g~~~---------~~~~~~ 317 (367)
++.+.|+++|++.-+..|. .++++|.+++.....+.+.+.|...+... +.+...
T Consensus 275 ~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~ 354 (392)
T 3qhx_A 275 AVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAM 354 (392)
T ss_dssp HHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGT
T ss_pred HHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccc
Confidence 9999999998875442221 45788998763344567777776544110 111000
Q ss_pred -----------CCeeEEEEEecCCCCCHHHHHHHHHHH
Q psy3048 318 -----------QGRPFLRFVVTSPETNQCDVAFAWNEI 344 (367)
Q Consensus 318 -----------~~~~~lRi~~~~~~~~~edid~li~~l 344 (367)
..+..+|+|+ ...+++++|+.+.++|
T Consensus 355 ~~~~~~~~~~g~~~~~iRlSv-g~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 355 THASTAGSQLEVPDDLVRLSV-GIEDVADLLDDLKQAL 391 (392)
T ss_dssp SCGGGBTTBCCCCTTEEEEEC-CSSCHHHHHHHHHHHH
T ss_pred cccccCHHHcCCCCCeEEEEe-ccCCHHHHHHHHHHHh
Confidence 1245899977 4555566666655554
No 131
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.78 E-value=8.8e-18 Score=161.59 Aligned_cols=263 Identities=11% Similarity=0.051 Sum_probs=162.5
Q ss_pred ceEEEecCCcchhHH---HHHHhCCc--ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVE---KSAIIGDV--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~---~~~~~~g~--~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
.-.|++++..|.+.. ......|. .++.++.++++.+|+++|++++++.. +.+|+++.+++ |...|+++
T Consensus 116 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~ 188 (420)
T 3gbx_A 116 GDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAK 188 (420)
T ss_dssp TCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHH
T ss_pred CCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHH
Confidence 345666777887743 22223344 44455667778999999999998752 24677766554 56889999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecc--hhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNA--NHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~--~~~~~~~~~~~~yl~ 182 (367)
|.++|++||+++++|++|+.+....+.... .+..+|+++.++||++++|.| |+++.++. ....... .+..
T Consensus 189 l~~l~~~~~~~li~De~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~----~~~~ 260 (420)
T 3gbx_A 189 MREIADSIGAYLFVDMAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLN----SAVF 260 (420)
T ss_dssp HHHHHHHTTCEEEEECTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHH----HHHC
T ss_pred HHHHHHHcCCEEEEECCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhh----hhcC
Confidence 999999999999999998765442221111 123469999999999987775 77776541 2222110 0010
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.... .........++..++.....++++++.++..+++
T Consensus 261 ~~~~------------------------------------------~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 298 (420)
T 3gbx_A 261 PSAQ------------------------------------------GGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNA 298 (420)
T ss_dssp ----------------------------------------------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred CCCC------------------------------------------CCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 1000 0000011233344454444567788899999999
Q ss_pred HHHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-------eEECCeeEEEEEecC---CC
Q psy3048 263 KKFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-------ASFQGRPFLRFVVTS---PE 331 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-------~~~~~~~~lRi~~~~---~~ 331 (367)
+++.+.|++ .|++++.+ +..+.+.+.+.........+.+.|.++|+ .+.+ ....+...+|+++.. ..
T Consensus 299 ~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~ 376 (420)
T 3gbx_A 299 KAMVEVFLN-RGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANI-TVNKNSVPNDPKSPFVTSGIRIGSPAVTRRG 376 (420)
T ss_dssp HHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTE-ECEEECCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHHHHHh-cCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCc-EeccccCCCCccccCCCcceEEecchhcccC
Confidence 999999988 48888754 35566666664322234567777877785 4443 111233469997632 22
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy3048 332 TNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~ 351 (367)
.+++|++++++.|++++++.
T Consensus 377 ~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 377 FKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CCHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhCc
Confidence 46899999999999987653
No 132
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.78 E-value=2.5e-18 Score=165.85 Aligned_cols=262 Identities=9% Similarity=0.006 Sum_probs=173.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC------------CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD------------NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~------------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
.-.|++++.+|.++...+...|.+++.++.+. ++.+|+++|++++++.+ .+|++++++|++|
T Consensus 115 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~nptG 188 (422)
T 3fvs_A 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRT------KALVLNTPNNPLG 188 (422)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTE------EEEEEESSCTTTC
T ss_pred CCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCc------eEEEECCCCCCCC
Confidence 34566778899999999999999999999864 45799999999987544 4788889999999
Q ss_pred ccC---ChhhHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhh
Q psy3048 98 AFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLT 171 (367)
Q Consensus 98 ~i~---dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~ 171 (367)
.+. ++++|+++|++||+++++|++|+.+.+....... .+.+....+++..+.+|.++ .+.++|+++.++ ..+.
T Consensus 189 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~ 267 (422)
T 3fvs_A 189 KVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD-HIMK 267 (422)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH-HHHH
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCH-HHHH
Confidence 997 6999999999999999999999875442211000 01111123577888999997 346688887743 2222
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH------
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS------ 245 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 245 (367)
.... ..... . ++ ...+....+..++..
T Consensus 268 ~~~~----~~~~~---------~-------------------------------~~---~~~~~~~a~~~~l~~~~~~~~ 300 (422)
T 3fvs_A 268 HLRT----VHQNS---------V-------------------------------FH---CPTQSQAAVAESFEREQLLFR 300 (422)
T ss_dssp HHHH----HHHTT---------T-------------------------------CC---CCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHH----HHhhc---------c-------------------------------CC---CCcHHHHHHHHHHhhcccccc
Confidence 1100 00000 0 00 000112233333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCch------------HHHHHHHHHhc-cCcEEE
Q psy3048 246 YGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDND------------LTNQLYERLMS-HKQIYI 312 (367)
Q Consensus 246 ~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~------------~~~~l~~~L~~-~g~~~~ 312 (367)
...+.+++..++..++++++.+.|+++ |+++..+.....+++.+..... ...++.+.+.+ .| +++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-v~v 378 (422)
T 3fvs_A 301 QPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG-LVA 378 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHC-EEC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcC-EEE
Confidence 124567888889999999999999998 8887766555555665532000 03467777655 46 444
Q ss_pred EEeE-E-------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 313 IKAS-F-------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 313 ~~~~-~-------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.++. + .+.+++|+++.. ++++++.++++|++++++
T Consensus 379 ~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 379 IPVSIFYSVPHQKHFDHYIRFCFVK---DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEGGGGSCHHHHTTSCSEEEEECCC---CHHHHHHHHHHHHHHHHC
T ss_pred eCcHHhcCCcCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHhh
Confidence 4432 2 246799997643 899999999999998764
No 133
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.77 E-value=3.1e-17 Score=157.89 Aligned_cols=245 Identities=13% Similarity=0.109 Sum_probs=161.3
Q ss_pred eEEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+... .++..|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|+
T Consensus 102 d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~t------~~v~l~~p~NptG~v~~l~~i~ 170 (404)
T 1e5e_A 102 DHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPNT------KIVYFETPANPTLKIIDMERVC 170 (404)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCC------cEEEEECCCCCCCcccCHHHHH
Confidence 456778889999888 677789999999875 8899999987654 5888999999999999999999
Q ss_pred HHHhh-cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcccccc
Q psy3048 107 PICQE-YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~-~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++ ||+++++|++|+.+.+..+ .. . .+|+++.++||++++|.+ +|+++.+++ .+.+.+.....+..
T Consensus 171 ~la~~~~~~~li~De~~~~~~~~~~-~~---~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~~- 241 (404)
T 1e5e_A 171 KDAHSQEGVLVIADNTFCSPMITNP-VD---F---GVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDIT- 241 (404)
T ss_dssp HHHHTSTTCEEEEECTTTCTTTCCG-GG---G---TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCCC-
T ss_pred HHHHhhcCCEEEEECCCchhhhCCc-cc---c---CCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhCC-
Confidence 99999 9999999999987654322 11 1 249999999999998866 688887543 33311111000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
... ...+..++++..+. .+..+.++..++++
T Consensus 242 -------------------------------------------g~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~ 272 (404)
T 1e5e_A 242 -------------------------------------------GSV----ISPHDAWLITRGLS--TLNIRMKAESENAM 272 (404)
T ss_dssp -------------------------------------------CCC----CCHHHHHHHHHHHT--THHHHHHHHHHHHH
T ss_pred -------------------------------------------CCC----CCHHHHHHHHHhHh--HHHHHHHHHHHHHH
Confidence 000 01233343333332 23445556667777
Q ss_pred HHHHHhcCCCCeE-EeCC------------C----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------
Q psy3048 264 KFADLVEKDDRFE-LVCP------------P----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF--------- 317 (367)
Q Consensus 264 ~l~~~L~~~~g~~-~~~~------------~----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------- 317 (367)
++.+.|++.+.+. ++.+ + ..+++.|.+++ . ..++.+.|.+.|. +.....+
T Consensus 273 ~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~-~--~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~ 348 (404)
T 1e5e_A 273 KVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS-G--FEGAKKLLDNLKL-ITLAVSLGGCESLIQH 348 (404)
T ss_dssp HHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT-H--HHHHHHHHHTCSS-SEESSCCCSSSCEEEC
T ss_pred HHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC-C--HHHHHHHHHhCCC-ceeccCCCCcceeeec
Confidence 7777776665443 2221 1 26778888764 1 2344455555564 2222111
Q ss_pred ----------------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 318 ----------------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 318 ----------------~~--~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.| ++++|+++.. ||++.+++.|+++++.+.+
T Consensus 349 ~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-----e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 349 PASMTHAVVPKEEREAAGITDGMIRLSVGI-----EDADELIADFKQGLDALLR 397 (404)
T ss_dssp GGGTTTTTSCHHHHHHTTCCTTEEEEECCS-----SCHHHHHHHHHHHHHHHHC
T ss_pred ccccccccCCHHHHHhcCCCCCeEEEEeCC-----CCHHHHHHHHHHHHHHHHH
Confidence 12 4699997643 7899999999999887654
No 134
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.77 E-value=7.5e-18 Score=158.87 Aligned_cols=251 Identities=12% Similarity=0.046 Sum_probs=161.4
Q ss_pred EEEecCCcchhHHH---HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-cccC---Chhh
Q psy3048 32 VAYASDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAFD---NLEE 104 (367)
Q Consensus 32 ~v~~s~~~H~s~~~---~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i~---dl~~ 104 (367)
+|+++...|++... .+...|++++.++. +++.+|+++|+++. .+ .+|+++.++|++ |.+. ++++
T Consensus 90 ~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~~--~~------~~v~~~~p~np~~G~~~~~~~l~~ 160 (357)
T 3lws_A 90 TVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKALP--DI------ACLLLELPQREIGGVAPAFSELET 160 (357)
T ss_dssp EEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTCC--SC------SEEEEESSBGGGTSBCCCHHHHHH
T ss_pred EEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcCc--Cc------ceEEEEcccccCCceeCCHHHHHH
Confidence 77888889888765 34567899988885 56789999999872 13 478889999888 8876 4899
Q ss_pred HHHHHhhcCcEEEEecccccccc--cChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccc
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~--~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
|+++|++||+++|+|++|..... ......... ..+|.++.++||++++|.| |+++. +++.+....... ....
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~~~-~~~~~~~~~~~~-~~~~ 234 (357)
T 3lws_A 161 ISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGGIAG-AILAG-PAAFCQTARIWK-RRYG 234 (357)
T ss_dssp HHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCCSSC-EEEEE-CHHHHHHHHHHH-HHTT
T ss_pred HHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCCCce-EEEEc-CHHHHHHHHHHH-HHhc
Confidence 99999999999999999862111 111111111 2358889999999988877 66655 444333221000 0000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
... . . .. ..+.....+++. ..+..++..+++
T Consensus 235 ~~~--------------------------------------~--~---~~-~~~~~~~~~l~~-----~~~~~~~~~~~~ 265 (357)
T 3lws_A 235 GDL--------------------------------------I--S---LY-PYIVSADYYYEL-----RKDRMGQYYEQA 265 (357)
T ss_dssp CCC--------------------------------------S--C---CH-HHHHHHHHHHHH-----HTTCHHHHHHHH
T ss_pred CCc--------------------------------------c--c---ch-HHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence 000 0 0 00 001111122322 223344567788
Q ss_pred HHHHHHhcCCCCeEEe-CCCCceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEe-EE-CCeeEEEEEecCCC--CCHHH
Q psy3048 263 KKFADLVEKDDRFELV-CPPSMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKA-SF-QGRPFLRFVVTSPE--TNQCD 336 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~-~~-~~~~~lRi~~~~~~--~~~ed 336 (367)
+++.+.|++++|+++. .++..+.+.++++... ....++.+.|.++|+. +.+. .. .+..++|+++...+ .++++
T Consensus 266 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~g~~~~~~~~~~r~~i~~~~~~~~~~~ 344 (357)
T 3lws_A 266 KQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLG-FVGYLVDKDGYCSTEISVGDAYGELDQQT 344 (357)
T ss_dssp HHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEE-SCSCCEECSSEEEEEEEBCTTGGGSCHHH
T ss_pred HHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeE-EecccccCCCceEEEEEecchhhhcCHHH
Confidence 9999999999999985 5677888888886532 2256788889888854 3322 11 35669999775332 56888
Q ss_pred HHHHHHHHHHH
Q psy3048 337 VAFAWNEISHQ 347 (367)
Q Consensus 337 id~li~~l~~~ 347 (367)
++..++.|.+.
T Consensus 345 l~~al~~l~~a 355 (357)
T 3lws_A 345 RDAGFARLRQA 355 (357)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888765
No 135
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=1.5e-17 Score=155.29 Aligned_cols=244 Identities=11% Similarity=0.048 Sum_probs=166.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPIC 109 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~ 109 (367)
.-.|++++.+|.++...++..|++++.++.++++.+|+++|+++ .. +.++++++++|++|.+.|+++|.++|
T Consensus 90 gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~------~~~v~i~~p~nptG~~~~~~~l~~l~ 161 (337)
T 3p1t_A 90 SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SR------DDCVVLANPSNPTGQALSAGELDQLR 161 (337)
T ss_dssp TSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC--CT------TEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh--cC------CCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 34677788999999999999999999999988899999999876 22 35889999999999999999999999
Q ss_pred hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 110 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 110 ~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
+++++ +++|++|+.+...... . ......++++.+.+|+++ .+.++|+++... ......... ..
T Consensus 162 ~~~~~-~ivDea~~~~~~~~~~-~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~l~~~--------~~-- 225 (337)
T 3p1t_A 162 QRAGK-LLIDETYVDYSSFRAR-G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS-ELIAAMKRK--------QW-- 225 (337)
T ss_dssp HHCSE-EEEECTTGGGSSCSSS-C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH-HHHHHHHTT--------SC--
T ss_pred HhCCc-EEEECCChhhcccccc-c---cccCCCEEEEeeCchhccCcchheEEEEeCH-HHHHHHHhh--------cC--
Confidence 99997 6669999754322110 0 112234788999999996 456678877643 333221110 00
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADL 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~ 268 (367)
.+ + ...+....+..+++. .+.+++..++..+.++++.+.
T Consensus 226 -----~~-------------------------------~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~ 264 (337)
T 3p1t_A 226 -----FC-------------------------------N---VGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADA 264 (337)
T ss_dssp -----TT-------------------------------C---SCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CC-------------------------------C---CCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 000111222222221 234667777888888999999
Q ss_pred hcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 269 VEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 269 L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
|+++ |+++. ++..+.+.+.... ..++.+.|.++|+ .+.++. +...+++|+++. +++|+++++++|+++
T Consensus 265 L~~~-g~~~~-~~~~~~~~~~~~~----~~~~~~~l~~~gi-~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 265 LRGL-GYRVA-SSEANFVLVENAA----GERTLRFLRERGI-QVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEY 333 (337)
T ss_dssp HHHT-TCCBC-CCSSSEEEEECTT----THHHHHHHHHTTE-ECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHH
T ss_pred HHHC-cCEEC-CCCCeEEEEEcCC----HHHHHHHHHHCCe-EEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHH
Confidence 9887 77654 4455666666543 3467777888884 444332 233569999764 699999999999987
Q ss_pred HH
Q psy3048 348 SS 349 (367)
Q Consensus 348 ~~ 349 (367)
.+
T Consensus 334 ~~ 335 (337)
T 3p1t_A 334 SD 335 (337)
T ss_dssp TC
T ss_pred hh
Confidence 43
No 136
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.77 E-value=4.6e-17 Score=157.50 Aligned_cols=267 Identities=12% Similarity=0.098 Sum_probs=168.8
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHh------hCCCccEEEE-EecCCCcccccCCh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL------AKGLIPCCLV-ATLGTTGTCAFDNL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~------~~~~~~~~vv-~~~~~t~~G~i~dl 102 (367)
.-.|++.+.+|.++...++..|++++.++.+++ .+|+++|+++++... .....+.+|+ ..+++|++|.+.|.
T Consensus 132 gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~ 210 (425)
T 2r2n_A 132 GDNVLLDEPAYSGTLQSLHPLGCNIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTS 210 (425)
T ss_dssp TCEEEEESSCCHHHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCH
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCH
Confidence 346777788999999999999999999998655 489999999986311 0001133554 46889999999776
Q ss_pred h---hHHHHHhhcCcEEEEecccccccccCh---hhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccC
Q psy3048 103 E---ELGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT 176 (367)
Q Consensus 103 ~---~I~~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~ 176 (367)
+ +|+++|++||+++++|++|+.+.+... .... + +....++++.+.+|+++.+..+|+++.++. .......
T Consensus 211 ~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~-~-~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~~~l~~- 286 (425)
T 2r2n_A 211 ERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS-M-DVDGRVIRADSFSKIISSGLRIGFLTGPKP-LIERVIL- 286 (425)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGG-G-CTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HHHHHHH-
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccc-c-CCCCCEEEEccchhhccCccceEEEecCHH-HHHHHHH-
Confidence 5 999999999999999999986544221 1110 1 111235778899999973344799888542 2222110
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH----HHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL----KGLQ 252 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~g~~ 252 (367)
..... .++ ...+....+..++...+. +.++
T Consensus 287 ---~~~~~----------------------------------------~~~---~~~~~q~a~~~~l~~~~~~~~~~~~~ 320 (425)
T 2r2n_A 287 ---HIQVS----------------------------------------TLH---PSTFNQLMISQLLHEWGEEGFMAHVD 320 (425)
T ss_dssp ---HHHTT----------------------------------------TCS---SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHh----------------------------------------cCC---CCHHHHHHHHHHHHhcccchHHHHHH
Confidence 00000 000 011112233344443322 3456
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCeE-EeCCCCceeEEEEEcCCchHHHH-HHHHHhccCcEEEEEeE-EC-----CeeEE
Q psy3048 253 AYLRKHISLAKKFADLVEK-DDRFE-LVCPPSMGLVCFRLKGDNDLTNQ-LYERLMSHKQIYIIKAS-FQ-----GRPFL 323 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~-~~g~~-~~~~~~~~~v~f~~~~~~~~~~~-l~~~L~~~g~~~~~~~~-~~-----~~~~l 323 (367)
+..++..+..+++.+.|++ ++|+. +..+.....++++++.. ....+ +.+.|.++|+. +.++. +. +..++
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-~~~~~~~~~~l~~~gv~-v~pg~~f~~~~~~~~~~i 398 (425)
T 2r2n_A 321 RVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-NDVKELIEEKAVKMGVL-MLPGNAFYVDSSAPSPYL 398 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-SCCHHHHHTHHHHTTEE-CEEGGGGSSSTTSCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-CCHHHHHHHHHHHCCcE-EechhhhcCCCCCCCCEE
Confidence 6667777888888888887 57764 44444555667777642 12334 57778878854 44432 21 24699
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
|++++ ..+++++++++++|++++++.
T Consensus 399 Ris~~--~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 399 RASFS--SASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EEECS--SCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeC--CCCHHHHHHHHHHHHHHHHHh
Confidence 99764 248999999999999988754
No 137
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=3.4e-17 Score=157.76 Aligned_cols=263 Identities=11% Similarity=0.028 Sum_probs=159.5
Q ss_pred ceEEEecCCcchh-HHHHHH--hCCcc--eEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 30 RLVAYASDQSNSS-VEKSAI--IGDVP--VRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s-~~~~~~--~~g~~--v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
.-.|++++.+|.+ ....+. ..|.. ++.++.+ +++.+|+++|++++++.. +.+|+++++++ |...+++
T Consensus 118 gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~ 190 (425)
T 3ecd_A 118 GDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFA 190 (425)
T ss_dssp TCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHH
T ss_pred CCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHH
Confidence 4467777888887 223322 44554 4455554 458999999999997432 23666665544 7889999
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
+|.++|++||+++++|++|+.+.+..+.... .+..+|+++.++||++.+|. .|+++.+++....... .....
T Consensus 191 ~i~~l~~~~~~~li~De~~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~----~~~~~ 262 (425)
T 3ecd_A 191 RFRAIADSVGAKLMVDMAHIAGVIAAGRHAN---PVEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKIN----SAVFP 262 (425)
T ss_dssp HHHHHHHHHTCEEEEECGGGHHHHHTTSSCC---GGGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHH----HHHC-
T ss_pred HHHHHHHHcCCEEEEECcChHhhhhcccccC---chhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHH----hhhCc
Confidence 9999999999999999998766543322111 12235999999999997664 5777776443322110 00101
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
... .. .......++.+++.....++++++.++..++++
T Consensus 263 ~~~----~~--------------------------------------~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 300 (425)
T 3ecd_A 263 GLQ----GG--------------------------------------PLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQ 300 (425)
T ss_dssp --------C--------------------------------------CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred ccc----CC--------------------------------------ccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 000 00 000112334444544455678889999999999
Q ss_pred HHHHHhcCCCCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE-------CCeeEEEEEe---cCCCC
Q psy3048 264 KFADLVEKDDRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF-------QGRPFLRFVV---TSPET 332 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-------~~~~~lRi~~---~~~~~ 332 (367)
++.+.|++. |+++..+ ...+.+.+.+.+.......+.+.|.++|+. +.+... .....+|+++ +....
T Consensus 301 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~ 378 (425)
T 3ecd_A 301 ALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGIT-CNKNGIPFDPEKPTITSGIRLGTPAGTTRGF 378 (425)
T ss_dssp HHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEE-CEECCCTTCSSCTTTCSEEEEESHHHHHTTC
T ss_pred HHHHHHHhC-CCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCE-ecccccCCCCCCCCCccceeccchhheeccC
Confidence 999999885 8888754 355666776653222345777788777843 432111 1234799963 22344
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy3048 333 NQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 333 ~~edid~li~~l~~~~~~~ 351 (367)
+++|++++++.|++++++.
T Consensus 379 ~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 379 GAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 5999999999999998876
No 138
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.77 E-value=1.1e-18 Score=165.59 Aligned_cols=257 Identities=10% Similarity=0.038 Sum_probs=163.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCCC-CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...++...|+++++++.+++ +.+|+++|++++++++ .+|+ +++++|...|+++|.++
T Consensus 75 gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~------~~v~---~~~~~G~~~~~~~i~~l 145 (367)
T 3nyt_A 75 GDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRT------KAII---PVSLYGQCADFDAINAI 145 (367)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHH
T ss_pred cCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCC------cEEE---eeCCccChhhHHHHHHH
Confidence 446788889999999999999999999999754 8999999999986544 3444 66789999999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeec--cccccccCCcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFN--AHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
|++||+++++|++|+.+....... .+. ..|+++++ +||+++++...|+++.+++.......... ..+..
T Consensus 146 a~~~~~~li~D~a~~~g~~~~~~~----~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~----~~g~~ 216 (367)
T 3nyt_A 146 ASKYGIPVIEDAAQSFGASYKGKR----SCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIA----RHGQD 216 (367)
T ss_dssp HHHTTCCBEEECTTTTTCEETTEE----TTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHT----BTTEE
T ss_pred HHHcCCEEEEECccccCCeECCee----ccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHH----hcCCC
Confidence 999999999999998654422111 111 12777777 69999864446666665554332221100 00000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFA 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~ 266 (367)
..| .........+...+...+++ ...+.+++..++.+++++++.
T Consensus 217 ------~~~----------------------------~~~~~g~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~ 260 (367)
T 3nyt_A 217 ------RRY----------------------------HHIRVGVNSRLDTLQAAILL--PKLEIFEEEIALRQKVAAEYD 260 (367)
T ss_dssp ------ETT----------------------------EECSCCCBCCCCHHHHHHHH--HHHHTHHHHHHHHHHHHHHHH
T ss_pred ------cCc----------------------------eeeccCcCCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000000011122222222 234456778888999999999
Q ss_pred HHhcCCCCeEEeCCC-----CceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE---------C------------Ce
Q psy3048 267 DLVEKDDRFELVCPP-----SMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF---------Q------------GR 320 (367)
Q Consensus 267 ~~L~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---------~------------~~ 320 (367)
+.|+++ ++.+...+ ....+.+..+ ..+++.+.|.++|+. +..... . ..
T Consensus 261 ~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~GI~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (367)
T 3nyt_A 261 LSLKQV-GIGTPFIEVNNISVYAQYTVRMD----NRESVQASLKAAGVP-TAVHYPIPLNKQPAVADEKAKLPVGDKAAT 334 (367)
T ss_dssp HHHHHT-TCCCCCCCTTEECCCSSEEEECS----SHHHHHHHHHHHTCC-CBCSCSSCGGGSGGGCCTTCCCHHHHHHHH
T ss_pred HHhccC-CeeccCCCCCCceeeEEEEEEeC----CHHHHHHHHHHCCCc-eeccCCCccccChhhhccCCCChHHHHHHh
Confidence 999987 55543321 1223344433 256788888888853 221110 0 13
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
..+|+ +.++.+|++||+++++.|++.
T Consensus 335 ~~l~l-p~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 335 QVMSL-PMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HEEEE-CCCTTCCHHHHHHHHHHHHC-
T ss_pred CeEEc-cCCCCCCHHHHHHHHHHHHHH
Confidence 47899 568899999999999999765
No 139
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.77 E-value=1.6e-17 Score=159.39 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=97.6
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++..|.++...+ ...|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 103 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i 171 (398)
T 2rfv_A 103 GDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPET------KVVYIETPANPTLSLVDIETV 171 (398)
T ss_dssp TCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTTE------EEEEEESSBTTTTBCCCHHHH
T ss_pred CCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHH
Confidence 346777889999988876 6789999999875 8999999987644 588889999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEec
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKN 166 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~ 166 (367)
.++|++||+++++|++|+.+.+..+ .. .+ +|+++.++||++++|.+ +|+++.++
T Consensus 172 ~~l~~~~~~~li~De~~~~~~~~~~-~~---~~---~di~~~s~sK~~~~~g~~~~G~~~~~~ 227 (398)
T 2rfv_A 172 AGIAHQQGALLVVDNTFMSPYCQQP-LQ---LG---ADIVVHSVTKYINGHGDVIGGIIVGKQ 227 (398)
T ss_dssp HHHHHHTTCEEEEECTTTCTTTCCG-GG---GT---CSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred HHHHHHcCCEEEEECCCcccccCCc-hh---hC---CcEEEEeCcccccCCCCceEEEEEECH
Confidence 9999999999999999987655322 11 12 49999999999988866 58887754
No 140
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.76 E-value=1.8e-17 Score=163.83 Aligned_cols=271 Identities=11% Similarity=0.025 Sum_probs=170.6
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---Chh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~ 103 (367)
+.-.|++++.+|.++..+++..|++++.+++++ ++.+|+++|++++++..+++..+.+|++++++|+||.+- +++
T Consensus 181 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~ 260 (500)
T 3tcm_A 181 EKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQY 260 (500)
T ss_dssp TTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHH
Confidence 455788889999999999999999999999864 469999999999998655544567888889999999994 577
Q ss_pred hHHHHHhhcCcEEEEecccccccccCh----hhhhhhCCC----CCcc-eeeeccccccccC--CcceeEEEe--cchhh
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLP----EYAHLKRGL----EYVD-SFAFNAHKWLLTN--HDCSAMWVK--NANHL 170 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~----~~~~~~~~~----~~~D-~~~~~~hK~l~~p--~g~g~l~~~--~~~~~ 170 (367)
+|+++|++||+++++|++|+.+.+..+ .+......+ .... ++..+.+|.+.++ ..+|+++.. +++..
T Consensus 261 ~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 340 (500)
T 3tcm_A 261 DIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR 340 (500)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH
T ss_pred HHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH
Confidence 777789999999999999987555221 111000111 1122 4455889998433 456777763 33333
Q ss_pred hhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH-----
Q psy3048 171 TNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS----- 245 (367)
Q Consensus 171 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 245 (367)
.........+. . +.......+..++..
T Consensus 341 ~~l~~~~~~~~----------~--------------------------------------~~~~~q~~~~~~l~~~~~~~ 372 (500)
T 3tcm_A 341 EQIYKIASVNL----------C--------------------------------------SNITGQILASLVMNPPKASD 372 (500)
T ss_dssp HHHHHHHHTTC----------C--------------------------------------CCHHHHHHHHHHHSCCCSSS
T ss_pred HHHHHHHhccc----------C--------------------------------------CCHHHHHHHHHHhcCccccc
Confidence 22110000000 0 000011111112210
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCCch-----------HHHHHH-HHHhccC
Q psy3048 246 ----YGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCF-RLKGDND-----------LTNQLY-ERLMSHK 308 (367)
Q Consensus 246 ----~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~~-----------~~~~l~-~~L~~~g 308 (367)
...+..+++.++..++++++.+.|++++|+++..+ +.+++.| ++..... ....++ +.|.+.|
T Consensus 373 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~g 451 (500)
T 3tcm_A 373 ESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEA-EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTG 451 (500)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecC-CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCC
Confidence 01233566677788999999999999999987654 3444333 3332111 012223 4455567
Q ss_pred cEEEEEeEE----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 309 QIYIIKASF----QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 309 ~~~~~~~~~----~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+ ++.++.. .+..++|+++. ++++++++++++|+++++++.
T Consensus 452 I-~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 452 I-VVVPGSGFGQVPGTWHFRCTIL---PQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp E-ECEESTTTCCCTTCCBEEEESC---SCTTTHHHHHHHHHHHHHHHH
T ss_pred E-EEEeCcccCCCCCCCEEEEEEC---CCHHHHHHHHHHHHHHHHHHH
Confidence 4 4444321 34568999764 578999999999999988764
No 141
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.76 E-value=3.8e-17 Score=156.81 Aligned_cols=245 Identities=15% Similarity=0.110 Sum_probs=157.2
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++..|.+....+ ...|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 104 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i 172 (398)
T 1gc0_A 104 GDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPAT------RVIYFESPANPNMHMADIAGV 172 (398)
T ss_dssp TCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCCCCcccccHHHH
Confidence 346777888999987775 5578999988764 8999999987644 588889999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
.++|++||+++++|++|+.+.+..+. . . .+|+++.++||++++|.+ .|+++.+++ .+...+.....++..
T Consensus 173 ~~l~~~~~~~li~D~~~~~~~~~~~~-~---~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~ 244 (398)
T 1gc0_A 173 AKIARKHGATVVVDNTYCTPYLQRPL-E---L---GADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQGLKDMTG 244 (398)
T ss_dssp HHHHGGGTCEEEEECTTTHHHHCCGG-G---G---TCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTHHHHHTC
T ss_pred HHHHHHcCCEEEEECCCcccccCCch-h---h---CceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHHhhccCC
Confidence 99999999999999999876553321 1 1 259999999999998866 577777543 232111100000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
. . ...+..+++++. .+.+..+.++..++++
T Consensus 245 ~-------~-----------------------------------------~~~~~~~~~~~~--l~~~~~~~~~~~~~~~ 274 (398)
T 1gc0_A 245 A-------V-----------------------------------------LSPHDAALLMRG--IKTLNLRMDRHCANAQ 274 (398)
T ss_dssp C-------C-----------------------------------------CCHHHHHHHHHH--HTTHHHHHHHHHHHHH
T ss_pred C-------C-----------------------------------------CCHHHHHHHHhc--cchHHHHHHHHHHHHH
Confidence 0 0 011233333332 2234555666677777
Q ss_pred HHHHHhcCCCCeE--------------EeCC---CCceeEEEEEcCCchHHHHHHHHHhccCcEEEE------------E
Q psy3048 264 KFADLVEKDDRFE--------------LVCP---PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII------------K 314 (367)
Q Consensus 264 ~l~~~L~~~~g~~--------------~~~~---~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~------------~ 314 (367)
++.+.|++++++. +..+ ...++++|.+++ . .....+.+.+.+..... +
T Consensus 275 ~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 351 (398)
T 1gc0_A 275 VLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-G--IGAGRRFMNALQLFSRAVSLGDAESLAQHP 351 (398)
T ss_dssp HHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-H--HHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred HHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-C--HHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence 7777777765543 2221 246788888864 1 22333444444432211 0
Q ss_pred e--E----------ECC--eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 315 A--S----------FQG--RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 315 ~--~----------~~~--~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
. . ..| +.++|+|+ ...+++++|+.+.++|+++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~iRis~-g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 352 ASMTHSSYTPEERAHYGISEGLVRLSV-GLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp GGTTTSSSCHHHHHHTTCCTTEEEEEC-CSSCHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEe-CcCCHHHHHHHHHHHHHhc
Confidence 0 0 001 36999987 4678899999999988765
No 142
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=1.4e-17 Score=157.26 Aligned_cols=246 Identities=11% Similarity=0.003 Sum_probs=165.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|++++.+|.++...++..|++++.++.++++.+ ++++++++ +.++++++++|++|.+.|+++|.++|+
T Consensus 107 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~~~--------~~~v~i~~p~nptG~~~~~~~l~~l~~ 176 (360)
T 3hdo_A 107 EEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPERYE--------GKVFFLTTPNAPLGPSFPLEYIDELAR 176 (360)
T ss_dssp CEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSSBC--------SSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhhcC--------CCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 35667889999999999999999999999776666 44433221 247888999999999999999999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
++|+++++|++|+.+... ..... .. ....++++.+.+|+++ .+.++|+++. +++...........
T Consensus 177 ~~~~~li~De~~~~~~~~-~~~~~-~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~---------- 242 (360)
T 3hdo_A 177 RCAGMLVLDETYAEFAES-NALEL-VR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDH---------- 242 (360)
T ss_dssp HBSSEEEEECTTGGGSSC-CCTHH-HH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCS----------
T ss_pred HCCCEEEEECChHhhCCc-chhHH-hc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCC----------
Confidence 999999999999863211 11110 00 0122577889999986 3456788777 33333221100000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
+ . ...+....+..+++. .+.+++..++..++++++.+.|
T Consensus 243 -----~-------------------------------~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L 281 (360)
T 3hdo_A 243 -----Y-------------------------------N---LDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTEL 281 (360)
T ss_dssp -----C-------------------------------C---SCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----C-------------------------------C---CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000112233333432 4457888889999999999999
Q ss_pred cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 270 EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 270 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
+++ |+.+. ++..+.+.+.+++ ....++.+.|.++|+ .+.+.. .....++|+++. +++|+|+++++|+++.
T Consensus 282 ~~~-~~~~~-~~~~~~~~~~~~~--~~~~~l~~~l~~~gi-~v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 282 RSI-GYDVI-PSQGNYLFATPPD--RDGKRVYDGLYARKV-LVRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIG 352 (360)
T ss_dssp HHT-TCEEC-CCSSSEEEEECTT--CCHHHHHHHHHHTTE-ECBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHH
T ss_pred HHC-CCEEc-CCCccEEEEECCC--CCHHHHHHHHHHCCE-EEEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 988 88865 4555667776653 235788889988884 343322 223568999763 7999999999999886
Q ss_pred HH
Q psy3048 349 SE 350 (367)
Q Consensus 349 ~~ 350 (367)
+.
T Consensus 353 ~~ 354 (360)
T 3hdo_A 353 EG 354 (360)
T ss_dssp C-
T ss_pred cc
Confidence 53
No 143
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.5e-18 Score=166.53 Aligned_cols=260 Identities=12% Similarity=0.055 Sum_probs=171.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC------------CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD------------NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~------------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
.-.|++.+..|.++...++..|++++.++.+. ++.+|+++|++++++.+ .+|++++++|++|
T Consensus 142 gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG 215 (447)
T 3b46_A 142 GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKT------KAVIINTPHNPIG 215 (447)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTE------EEEEEESSCTTTC
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCC------eEEEEeCCCCCCC
Confidence 34566677899999999999999999998753 46899999999886543 4778889999999
Q ss_pred cc---CChhhHHHHHhhcCcEEEEecccccccccCh--hhhhhhCCCCCcceeeecccccccc-CCcceeEEEecchhhh
Q psy3048 98 AF---DNLEELGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANHLT 171 (367)
Q Consensus 98 ~i---~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~~~ 171 (367)
.+ +++++|+++|++||+++++|++|+.+.+..+ .......+....++++.+.+|+++. +..+|+++.++++.+.
T Consensus 216 ~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~ 295 (447)
T 3b46_A 216 KVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLS 295 (447)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHH
T ss_pred cccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHH
Confidence 98 5799999999999999999999987544211 1100000011248999999999873 3458988873333332
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-HHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-LKG 250 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g 250 (367)
..... ..+. .++ .......++..+|.... .+.
T Consensus 296 ~l~~~-~~~~-------------------------------------------~~~---~~~~~~~a~~~aL~~~~~~~~ 328 (447)
T 3b46_A 296 YAAKA-HTRI-------------------------------------------CFA---SPSPLQEACANSINDALKIGY 328 (447)
T ss_dssp HHHHH-HHHH-------------------------------------------TSS---CCHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHH-Hhhc-------------------------------------------cCC---CChHHHHHHHHHHhCCcchHH
Confidence 21100 0000 000 01111223334444322 345
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC--------------chHHHHHHHHHhc-cCcEEEEEe
Q psy3048 251 LQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD--------------NDLTNQLYERLMS-HKQIYIIKA 315 (367)
Q Consensus 251 ~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--------------~~~~~~l~~~L~~-~g~~~~~~~ 315 (367)
+++..++..++++++.+.|+++ |+++..+.....+++.++.. .....++.+.|.+ .|+ .+.+.
T Consensus 329 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV-~v~pg 406 (447)
T 3b46_A 329 FEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGV-VAIPP 406 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCE-ECBCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCE-EEECc
Confidence 7778888999999999999887 78776554445566666531 1235578888875 564 44332
Q ss_pred -EEC-------CeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 316 -SFQ-------GRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 316 -~~~-------~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.+. +..++|+++. .++++++.+++.|+++
T Consensus 407 ~~f~~~~~~~~~~~~iRls~~---~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 407 TEFYIKEHEKAAENLLRFAVC---KDDAYLENAVERLKLL 443 (447)
T ss_dssp GGGSCGGGGGGGTTEEEEECC---SCHHHHHHHHHHGGGG
T ss_pred hHhCCCCccCCCCCEEEEEEe---CCHHHHHHHHHHHHHH
Confidence 111 1469999764 2799999999998764
No 144
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.75 E-value=1.7e-17 Score=157.46 Aligned_cols=250 Identities=9% Similarity=-0.064 Sum_probs=164.2
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELGP 107 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~~ 107 (367)
-.|++++.+|.++...++..|++++.++.+++..+++ +|++++.+.++ +|++++++|++|.+.| +++|++
T Consensus 109 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~~~------~v~~~~p~nptG~~~~~~~l~~i~~ 181 (376)
T 3ezs_A 109 PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQEVD------LVILNSPNNPTGRTLSLEELISWVK 181 (376)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHHCS------EEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccCCC------EEEEcCCCCCcCCCCCHHHHHHHHH
Confidence 4667778899999999999999999999876545565 78888877653 7778899999999966 677778
Q ss_pred HHhhcCcEEEEecccccccccCh---hhhhhh-C--CCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccc
Q psy3048 108 ICQEYNIWLHVDAAYAGSALLLP---EYAHLK-R--GLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 108 l~~~~gi~l~vD~a~~~~~~~~~---~~~~~~-~--~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|++||+++++|++|+.+.+... ...... . .....++++.+.+|+++ .+.++|+++.. ++....... .
T Consensus 182 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~----~ 256 (376)
T 3ezs_A 182 LALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD-SRLLEKYKA----F 256 (376)
T ss_dssp HHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHH----H
T ss_pred HHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC-HHHHHHHHH----H
Confidence 89999999999999987554221 111000 0 01123788899999995 44667887763 332222100 0
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
. ... .+ + .+.+....+..++.. .+.+++..++..+
T Consensus 257 ~-~~~--------~~-------------------------------~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~ 291 (376)
T 3ezs_A 257 R-AYL--------GY-------------------------------T---SANAIQKASEAAWLD--DRHAEFFRNIYAN 291 (376)
T ss_dssp H-TTT--------CC-------------------------------C---CCHHHHHHHHHHHHC--SHHHHHHHHHHHH
T ss_pred H-hhh--------cC-------------------------------C---CChHHHHHHHHHHhC--cHHHHHHHHHHHH
Confidence 0 000 00 0 000112233333332 3447788888889
Q ss_pred HHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-E----CCeeEEEEEecCCCCCH
Q psy3048 261 LAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-F----QGRPFLRFVVTSPETNQ 334 (367)
Q Consensus 261 la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~----~~~~~lRi~~~~~~~~~ 334 (367)
+.+++.+.|+ ++. .+.....+.+.++ ...++.++|.+ +|+. +.++. + .+..++|+++.. ++
T Consensus 292 ~~~~l~~~l~---~~~--~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~~iRis~~~---~~ 358 (376)
T 3ezs_A 292 NLKLARKIFK---NTL--IYPYSFYVYLPVQ----NGENFAKTLYQNEGII-TLPALYLGRNRIGADYVRLALVY---DT 358 (376)
T ss_dssp HHHHHHHHST---TCC--CCSBSSEEEEECS----CHHHHHHHHHHHHCCB-CEEGGGGCSTTTTTTEEEEECCS---CH
T ss_pred HHHHHHHHhc---CCC--CCCcceEEEEECC----CHHHHHHHHHHhCCEE-EeCcHHhCCCCCCCCeEEEEEcC---CH
Confidence 9999999987 544 3334455566664 25678888887 6754 44332 1 245799997642 89
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQSSE 350 (367)
Q Consensus 335 edid~li~~l~~~~~~ 350 (367)
+|+++++++|++++++
T Consensus 359 ~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 359 PLLEKPLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 145
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.75 E-value=4.8e-17 Score=153.32 Aligned_cols=253 Identities=12% Similarity=0.041 Sum_probs=159.1
Q ss_pred eEEEecCCcchhHHHH---HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-cccCChhhH-
Q psy3048 31 LVAYASDQSNSSVEKS---AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAFDNLEEL- 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~---~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i~dl~~I- 105 (367)
.+|+++...|++.... +...|++++.++. +++.+|+++|+++ .+. +.+|+++.++|++ |.+.|.+++
T Consensus 90 ~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~~------~~~v~~~~p~n~~~G~~~~~~~l~ 161 (359)
T 3pj0_A 90 RRVAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-REP------VSSVLIELPQREIGGQLPAFEELE 161 (359)
T ss_dssp CEEEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SSC------CSEEEEESSBGGGTSBCCCHHHHH
T ss_pred cEEEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-cCC------ceEEEEEecccCCCcccCCHHHHH
Confidence 4677788888776432 2456999999987 5689999999987 332 3578888888877 688665555
Q ss_pred --HHHHhhcCcEEEEecccccccccC--hhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccc
Q psy3048 106 --GPICQEYNIWLHVDAAYAGSALLL--PEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYL 181 (367)
Q Consensus 106 --~~l~~~~gi~l~vD~a~~~~~~~~--~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 181 (367)
.++|++||+++++|++|..+.... ....... ..+|+++.+.||++++|.| |+++. +++......... ...
T Consensus 162 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~~~-~~~l~~~~~~~~-~~~ 235 (359)
T 3pj0_A 162 KISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AILAG-NDDFVQEAKIWK-RRY 235 (359)
T ss_dssp HHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEEEE-CHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEEEC-CHHHHHHHHHHH-HHh
Confidence 999999999999999986443210 0111111 2359999999999988855 55444 444333221000 000
Q ss_pred ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3048 182 KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l 261 (367)
... . + . .. ..+.....++... .+.+++..++
T Consensus 236 ~~~-~--------~-------------------------------~---~~-~~~~a~~~~l~~~-----~~~~~~~~~~ 266 (359)
T 3pj0_A 236 GGD-L--------I-------------------------------S---LY-PYILSADYYFEKR-----IGKMAEYFEA 266 (359)
T ss_dssp TCC-C--------S-------------------------------C---CH-HHHHHHHHHHHHH-----GGGHHHHHHH
T ss_pred CCC-c--------c-------------------------------h---hH-HHHHHHHHHHHHH-----HHHhHHHHHH
Confidence 000 0 0 0 00 0011111222221 2445567788
Q ss_pred HHHHHHHhcCCCCeEEe-CCCCceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEe---EECCeeEEEEEecCC--CCCH
Q psy3048 262 AKKFADLVEKDDRFELV-CPPSMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKA---SFQGRPFLRFVVTSP--ETNQ 334 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~---~~~~~~~lRi~~~~~--~~~~ 334 (367)
++++.+.|++++|+++. .++..+.+.++++... ....++.+.|.++|+. +.++ ...+..++|+++... ..+.
T Consensus 267 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~-v~~g~~~~~~~~~~~r~~i~~~~~~~~~ 345 (359)
T 3pj0_A 267 AKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVG-ISGYLQEKSADVCAFEVSVGDAFAEIPA 345 (359)
T ss_dssp HHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEE-CCSCCEEEETTEEEEEEECCTTGGGSCH
T ss_pred HHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcE-ecCCccccCCCceEEEEEecCccccCCH
Confidence 89999999999999986 4667788888886432 2356888889888854 3322 224677999976433 3467
Q ss_pred HHHHHHHHHHHHH
Q psy3048 335 CDVAFAWNEISHQ 347 (367)
Q Consensus 335 edid~li~~l~~~ 347 (367)
++++..++.|.+.
T Consensus 346 e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 346 KNLELVFRCLEKE 358 (359)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 8888888877654
No 146
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.75 E-value=2.6e-17 Score=157.21 Aligned_cols=254 Identities=9% Similarity=0.008 Sum_probs=165.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh---HH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE---LG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~---I~ 106 (367)
-.|+++..+|.++...++..|++++.++.++ ++.+|+++|++++++.+ .+|++++++|++|.+.|.++ |+
T Consensus 121 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~nptG~~~~~~~l~~i~ 194 (396)
T 3jtx_A 121 PAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRT------KLVFVCSPNNPSGSVLDLDGWKEVF 194 (396)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTE------EEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCc------EEEEEECCCCCCCCcCCHHHHHHHH
Confidence 4677788899999999999999999999854 56789999999998754 47778899999999966555 99
Q ss_pred HHHhhcCcEEEEecccccccccC----hhhhhh--hCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCcc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLL----PEYAHL--KRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~----~~~~~~--~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
++|++||+++++|++|+.+.+.. ...... +..-...++++.+.+|.++ .+.++|+++.. ++........ ..
T Consensus 195 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~-~~ 272 (396)
T 3jtx_A 195 DLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGD-AELLKNFLLY-RT 272 (396)
T ss_dssp HHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEEC-HHHHHHHHHH-HH
T ss_pred HHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeC-HHHHHHHHHH-Hh
Confidence 99999999999999998754422 110000 0000133788889999654 34567887653 3333221100 00
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI 259 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 259 (367)
+. . + ..+.+....+..++.. .+.+++..++..
T Consensus 273 ~~-~------------------------------------------~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~ 304 (396)
T 3jtx_A 273 YH-G------------------------------------------S---AMSIPVQRASIAAWDD--EQHVIDNRRLYQ 304 (396)
T ss_dssp HH-T------------------------------------------C---CCCHHHHHHHHHHHHC--CHHHHHHHHHHH
T ss_pred hc-c------------------------------------------c---CCCHHHHHHHHHHhCC--HHHHHHHHHHHH
Confidence 00 0 0 0000111222333332 456778888888
Q ss_pred HHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---------CCeeEEEEEecC
Q psy3048 260 SLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---------QGRPFLRFVVTS 329 (367)
Q Consensus 260 ~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---------~~~~~lRi~~~~ 329 (367)
++.+++.+.|+++ +.+..+.....+++.++. ....++.++|.++ | +.+.++.. .+..++|+++..
T Consensus 305 ~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~~~~~~~iRis~~~ 379 (396)
T 3jtx_A 305 EKFERVIPILQQV--FDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAA-IQVLPGRFLARDTEQGNPGEGYVRIALVA 379 (396)
T ss_dssp HHHHHHHHHHTTT--SCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHC-EECEEGGGGCCCCTTCCTTTTEEEEECCS
T ss_pred HHHHHHHHHHHhc--CCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCC-EEEeCChHhCCcccccCCCCCeEEEEEcC
Confidence 9999999999876 233333344456666653 2356788888654 6 44544322 235799997643
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~ 348 (367)
+++++++++++|++++
T Consensus 380 ---~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 380 ---DVATCVKAAEDIVSLY 395 (396)
T ss_dssp ---CHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHHHh
Confidence 7999999999998763
No 147
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.75 E-value=7.2e-17 Score=157.39 Aligned_cols=266 Identities=10% Similarity=0.053 Sum_probs=163.8
Q ss_pred EecCCcc-hhHHHHHHhCCcceEEEecCC----------CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCC-cccccCC
Q psy3048 34 YASDQSN-SSVEKSAIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTT-GTCAFDN 101 (367)
Q Consensus 34 ~~s~~~H-~s~~~~~~~~g~~v~~v~~~~----------~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t-~~G~i~d 101 (367)
+++..+| .++..++...|++++.+++++ ++.+|+++|++++++.++ ..+.+|+++.++| ++|.+.|
T Consensus 116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~ 193 (456)
T 2ez2_A 116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVS 193 (456)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCC
T ss_pred EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCC
Confidence 4456677 777888889999999998762 378999999999987652 1135778887887 8998876
Q ss_pred ---hhhHHHHHhhcCcEEEEecccccc---------cccChh-hhh---hhCCCCCcceeeeccccccccCCcceeEEEe
Q psy3048 102 ---LEELGPICQEYNIWLHVDAAYAGS---------ALLLPE-YAH---LKRGLEYVDSFAFNAHKWLLTNHDCSAMWVK 165 (367)
Q Consensus 102 ---l~~I~~l~~~~gi~l~vD~a~~~~---------~~~~~~-~~~---~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~ 165 (367)
+++|+++|++||+++++|++|+.+ ....+. ... .. + ...|++++++||+++.| ..|+++.+
T Consensus 194 ~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~d~~~~S~kk~~~~~-~gG~~~~~ 270 (456)
T 2ez2_A 194 MANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEM-F-SYADGCTMSGKKDCLVN-IGGFLCMN 270 (456)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHH-H-TTCSEEEEETTTTTCCS-SCEEEEES
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhh-c-ccCCEEEEeCcccCCCC-ceeEEEEC
Confidence 999999999999999999999864 111111 000 00 1 13488888899997744 46777764
Q ss_pred cchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHH-HHH
Q psy3048 166 NANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWM-TLR 244 (367)
Q Consensus 166 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 244 (367)
+++...........+. +.. .+ .+... ..+.+ ++.
T Consensus 271 ~~~~~~~~~~~~~~~~--~~~-------~~----------------------------------~~~~~--~~~~a~a~~ 305 (456)
T 2ez2_A 271 DDEMFSSAKELVVVYE--GMP-------SY----------------------------------GGLAG--RDMEAMAIG 305 (456)
T ss_dssp CHHHHHHHHHHHHHHT--CCT-------TT----------------------------------TTCCH--HHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcc--Ccc-------cc----------------------------------cCcch--hHHHHHHHH
Confidence 5443332111000000 000 00 00000 01111 111
Q ss_pred HhhHHHH-HHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEc----CC--chH-HHHHHHHH-hccCcEEEEEe
Q psy3048 245 SYGLKGL-QAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLK----GD--NDL-TNQLYERL-MSHKQIYIIKA 315 (367)
Q Consensus 245 ~~~~~g~-~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~----~~--~~~-~~~l~~~L-~~~g~~~~~~~ 315 (367)
.. +.+ ++..++..++++++.+.|++. |+++..|.....+.+.+. +. ... ...+.+.| .++|+..+..+
T Consensus 306 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g 382 (456)
T 2ez2_A 306 LR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERG 382 (456)
T ss_dssp HH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEES
T ss_pred HH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeeccc
Confidence 11 223 466677788899999999885 777665555555666542 11 122 33446677 46674333322
Q ss_pred E-------------ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 316 S-------------FQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 316 ~-------------~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. ..+..++|+++....++++|+++++++|++++++..
T Consensus 383 ~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 383 IISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp HHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred ccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 1 112368999775433789999999999999988654
No 148
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.75 E-value=4.2e-17 Score=157.79 Aligned_cols=270 Identities=16% Similarity=0.143 Sum_probs=162.9
Q ss_pred ceEEEecCCcchhHHHHH----HhCCcceEEE-ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVEKSA----IIGDVPVRQL-RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~----~~~g~~v~~v-~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+-.|+++..+|.+....+ +..|++++.+ +.+ |+++|++++++.+ .+|++++++|++|.+.|+++
T Consensus 97 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~~~------~~v~~~~~~n~~G~~~~l~~ 165 (421)
T 2ctz_A 97 GDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEKT------RAWWVESIGNPALNIPDLEA 165 (421)
T ss_dssp TCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-----CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHH
Confidence 446778889999987775 6689999998 764 8999999997655 47888999999999999999
Q ss_pred HHHHHhhcCcEEEEeccc-ccccccChhhhhhhCCCCCcceeeeccccccccCCc-ceeEEEecc--hh----hhhhccC
Q psy3048 105 LGPICQEYNIWLHVDAAY-AGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD-CSAMWVKNA--NH----LTNTFFT 176 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~-~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~~~~~--~~----~~~~~~~ 176 (367)
|.++|++||+++++|++| +.+. ...... . .+|++++++||++++|.+ .|++++.++ +. +......
T Consensus 166 i~~~a~~~g~~livD~~~~~~g~-~~~~~~---~---~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~ 238 (421)
T 2ctz_A 166 LAQAAREKGVALIVDNTFGMGGY-LLRPLA---W---GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEP 238 (421)
T ss_dssp HHHHHHHHTCEEEEECGGGGGGT-SCCGGG---G---TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSC
T ss_pred HHHHHHHcCCEEEEECCcccccc-cCCccc---c---CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccc
Confidence 999999999999999999 6553 222211 1 359999999999998753 787777531 11 1111111
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
...+... .+ ...+- +..+.. ..+ .......+.....+..+..+. +.+.+..+++
T Consensus 239 ~~g~~g~----------~~-~~~~~------~~~~~~-~~r------~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~ 292 (421)
T 2ctz_A 239 QPGYHGL----------RL-TEAFG------ELAFIV-KAR------VDGLRDQGQALGPFEAWVVLL--GMETLSLRAE 292 (421)
T ss_dssp BGGGTTB----------CH-HHHHG------GGHHHH-HHH------HTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHH
T ss_pred cchhhhh----------hh-hhhcc------hhHHHH-HHH------HHHHHhcCCCCCHHHHHHHHc--CcchHHHHHH
Confidence 0111000 00 00000 000000 000 000000011122333333332 3444566677
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeC-C-----------------CCceeEEEEEcCCchHHHHHHHHHhccCcE--------
Q psy3048 257 KHISLAKKFADLVEKDDRFELVC-P-----------------PSMGLVCFRLKGDNDLTNQLYERLMSHKQI-------- 310 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~-~-----------------~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~-------- 310 (367)
+..++++++.+.|+++|++..+. | ...++++|.+.+.......+.+.+...+..
T Consensus 293 ~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~s 372 (421)
T 2ctz_A 293 RHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRT 372 (421)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSC
T ss_pred HHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCc
Confidence 78899999999999999998763 2 135688999865212334555555332210
Q ss_pred -EEEEe--EE------------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 311 -YIIKA--SF------------QGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 311 -~~~~~--~~------------~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
...+. .+ -.++.+|+|+. .+|+|.+++.|++.+
T Consensus 373 l~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g-----~e~~~~li~~l~~al 420 (421)
T 2ctz_A 373 LAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVG-----LEHVEDLKAELKEAL 420 (421)
T ss_dssp EEECGGGTTTTTSCHHHHHHHTCCTTEEEEECC-----SSCHHHHHHHHHHHT
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeC-----CCCHHHHHHHHHHHh
Confidence 01110 00 01368999763 357888888888764
No 149
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.75 E-value=2.7e-17 Score=159.33 Aligned_cols=263 Identities=14% Similarity=0.138 Sum_probs=163.3
Q ss_pred ceEEEecCCcchhHHH----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++..|.+... .+...|+++++++.+ |+++|++++++.+ .+|++.+++|++|.+.|+++|
T Consensus 121 Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~~t------~~v~~e~p~NptG~~~dl~~i 189 (430)
T 3ri6_A 121 GDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDETT------KLLFLETISNPQLQVADLEAL 189 (430)
T ss_dssp TCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCCCC------eEEEEECCCCCCCeecCHHHH
Confidence 3456778889988877 556789999999875 8999999997755 488899999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-cceeEEE-ecchhhhhhccCCcccccc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSAMWV-KNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~~-~~~~~~~~~~~~~~~yl~~ 183 (367)
+++|+++|+++++|++|+.+.+..+. ..+ +|+++.+++|++++|. +.|.+++ +........ ..-+.+...
T Consensus 190 ~~la~~~g~~livD~a~~~~~~~~~~----~~g---~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~-~~~~~l~~~ 261 (430)
T 3ri6_A 190 SKVVHAKGIPLVVDTTMTPPYLLEAK----RLG---VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSL-PSLAPYYAK 261 (430)
T ss_dssp HHHHHTTTCCEEEECTTSCTTTCCGG----GGT---CSEEEEECCCEEETTEEECCEEEEECSCSCGGGS-TTTHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcccccCChH----HcC---CEEEEECCcccccCCCCceEEEEEECChHHhhhc-cchhhhhhh
Confidence 99999999999999999876552221 123 4999999999998762 2444444 322111000 000000000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
.. ...+ +... . ..+....+.....+..|..+ .+.+.+..++++..++++
T Consensus 262 ~g------~~~~-i~~~-~---------------------~~~~~~~g~~~~~~~a~l~l--~~l~~l~~r~~~~~~na~ 310 (430)
T 3ri6_A 262 AG------PMAF-LYKA-R---------------------KEVFQNLGPSLSPHNAYLQS--LGLETMALRIERSCQNAQ 310 (430)
T ss_dssp HG------GGHH-HHHH-H---------------------HTHHHHHCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred hc------hhhH-HHHH-H---------------------HHHHHhcCCCCCHHHHHHHH--hhhhhHHHHHHHHHHHHH
Confidence 00 0000 0000 0 00000001112223334333 356677888889999999
Q ss_pred HHHHHhcCCCCeEEeCCCC----------------ce-eEEEEEcCCchHHHHHHHHHhccCc---------EEEEE---
Q psy3048 264 KFADLVEKDDRFELVCPPS----------------MG-LVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIK--- 314 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~~~~~----------------~~-~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~--- 314 (367)
++.+.|+++|+++-+..|. .+ +++|.+++ .....++.+.|...+. ..+.|
T Consensus 311 ~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~ 389 (430)
T 3ri6_A 311 ELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDALKLIRRATNIHDNKSLILSPYHV 389 (430)
T ss_dssp HHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHCSSSEECSCCSCSSCEEECTGGG
T ss_pred HHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhCCcceecCCCCCCCceeeCCccc
Confidence 9999999999887443222 34 89999874 4455677777653321 00100
Q ss_pred --e-----EE----CCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 315 --A-----SF----QGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 315 --~-----~~----~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
. .. ..+.++|+|+. .||++.+++.|++.+
T Consensus 390 ~h~~~~~~~~~~~g~~~~liRlsvG-----~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 390 IYALNSHEERLKLEISPAMMRLSVG-----IEEIEDLKEDILQAL 429 (430)
T ss_dssp C---------CGGGSCTTEEEEECC-----SSCHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHHHHHhh
Confidence 0 00 12468999763 367888888888764
No 150
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.74 E-value=1.3e-17 Score=163.14 Aligned_cols=120 Identities=14% Similarity=0.153 Sum_probs=96.2
Q ss_pred eEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+.... ++..|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|+
T Consensus 172 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~t------k~v~l~~p~NptG~v~~l~~i~ 240 (464)
T 1ibj_A 172 EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIS 240 (464)
T ss_dssp CEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSSE------EEEEECSSCTTTCCCCCHHHHH
T ss_pred CEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCc------eEEEEeCCCCCCCEeecHHHHH
Confidence 3566778889888764 45679999999874 8999999987554 5888999999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc--eeEEEecch
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC--SAMWVKNAN 168 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~l~~~~~~ 168 (367)
++|++||+++++|++|+.+....+ .. . .+|+++.++||++++|.|+ |+++.+++.
T Consensus 241 ~la~~~gi~livDea~~~g~~~~~-~~---~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~~ 297 (464)
T 1ibj_A 241 EMAHAQGALVLVDNSIMSPVLSRP-LE---L---GADIVMHSATKFIAGHSDVMAGVLAVKGEK 297 (464)
T ss_dssp HHHHTTTCEEEEECTTTCTTTCCG-GG---T---TCSEEEEETTTTTTCSSCCCCEEEEECSHH
T ss_pred HHHHHcCCEEEEECCCcccccCCh-hh---c---CCEEEEECCcccccCCCCCcEEEEEEChHH
Confidence 999999999999999976543211 11 1 3599999999999998876 888886544
No 151
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.74 E-value=1.1e-16 Score=154.30 Aligned_cols=262 Identities=11% Similarity=0.053 Sum_probs=163.6
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecC-CCcccccCChhhHH-
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAFDNLEELG- 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i~dl~~I~- 106 (367)
.-.|++++.+|.++...++..|++++.++++ +++.+|+++|++++++..... ...+++++++ +|++|.+.|.+++.
T Consensus 126 gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~ 204 (418)
T 3rq1_A 126 GDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDS 204 (418)
T ss_dssp TCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred CCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHH
Confidence 3457778889999999999999999999984 567999999999998632100 1237778888 89999997765555
Q ss_pred --HHHh------hcCcEEEEecccccccccChhhhhh---hCCCCCcc---eeeecccccccc-CCcceeEEE--ecchh
Q psy3048 107 --PICQ------EYNIWLHVDAAYAGSALLLPEYAHL---KRGLEYVD---SFAFNAHKWLLT-NHDCSAMWV--KNANH 169 (367)
Q Consensus 107 --~l~~------~~gi~l~vD~a~~~~~~~~~~~~~~---~~~~~~~D---~~~~~~hK~l~~-p~g~g~l~~--~~~~~ 169 (367)
++|+ +||+++++|++|..+.+........ ..++. .| +++.+.+|.++. +..+|+++. ++++.
T Consensus 205 l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~ 283 (418)
T 3rq1_A 205 ILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLP-KEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEI 283 (418)
T ss_dssp HHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCC-TTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHH
T ss_pred HHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcC-CCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHH
Confidence 5555 8999999999997654322111111 11121 12 666789999864 356788776 23333
Q ss_pred hhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh--
Q psy3048 170 LTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-- 247 (367)
Q Consensus 170 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 247 (367)
....... ..+..... |. . ...+...++...+.
T Consensus 284 ~~~~~~~-~~~~~~~~----------------------------------------~~--~---~~~~~~~a~~~~l~~~ 317 (418)
T 3rq1_A 284 ADEFFEV-NKSTSRAT----------------------------------------WS--N---ICRPAMRTMANIVADP 317 (418)
T ss_dssp HHHHHHH-HHHHHHHH----------------------------------------TS--S---CCHHHHHHHHHHHTCH
T ss_pred HHHHHHH-HHHHHhhc----------------------------------------cC--C---CchHHHHHHHHHhCCH
Confidence 3221100 00000000 00 0 01122222222221
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeE-EEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe
Q psy3048 248 ------LKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLV-CFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR 320 (367)
Q Consensus 248 ------~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v-~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 320 (367)
.+..+++.++..++.+++.+.|+++ |+++..+ ..+.+ ++.+. ...++.+.|.++|+ ++.+ +.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi-~v~~----g~ 386 (418)
T 3rq1_A 318 AKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPY-RGGFFITIPTD----SANAICEELKKEHI-YVIA----LA 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCC-CSSSEEEEECT----THHHHHHHHHHTTE-ECEE----CS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCC-CceEEEEcCCC----CHHHHHHHHHhCCE-EEec----CC
Confidence 1233455667778888888888887 7776543 33433 33332 25678888888884 4443 24
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.++|+++. ..+++++++++++|+++++++.
T Consensus 387 ~~iRis~~--~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 387 NGIRIAAC--GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp SEEEEEGG--GSCHHHHTTHHHHHHHHHHHTT
T ss_pred CCeEEEEe--cCCHHHHHHHHHHHHHHHHHHh
Confidence 58999753 4579999999999999988764
No 152
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.74 E-value=2.4e-17 Score=158.61 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=96.6
Q ss_pred eEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+.... ++..|++++.++.+ |+++|++++++.+ .+|++++++|++|.+.|+++|+
T Consensus 106 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~t------~~v~~~~p~nptG~~~~l~~i~ 174 (403)
T 3cog_A 106 DQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPET------KLVWIETPTNPTQKVIDIEGCA 174 (403)
T ss_dssp CEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcCC------eEEEEECCCCCCCeeeCHHHHH
Confidence 3577778899886554 34679999999875 8999999987654 4888899999999999999999
Q ss_pred HHHhhcC-cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchh
Q psy3048 107 PICQEYN-IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANH 169 (367)
Q Consensus 107 ~l~~~~g-i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~ 169 (367)
++|++|| +++++|++|+.+.+..+ .. . .+|+++.+.||++++|.+ +|+++.+++..
T Consensus 175 ~la~~~g~~~livD~~~~~~~~~~~-~~-----~-~~div~~S~sK~~~g~~~~~~G~v~~~~~~l 233 (403)
T 3cog_A 175 HIVHKHGDIILVVDNTFMSPYFQRP-LA-----L-GADISMYSATKYMNGHSDVVMGLVSVNCESL 233 (403)
T ss_dssp HHHTSSSCCEEEEECTTTCTTTCCT-TT-----T-TCSEEEEETTTTTTCSSCCCCEEEEECCHHH
T ss_pred HHHHHcCCCEEEEECCCcccccCCc-cc-----c-CCeEEEEcChhhccCCCCCeEEEEEECcHHH
Confidence 9999999 99999999987654221 11 1 359999999999998876 48888765443
No 153
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.74 E-value=4.3e-17 Score=159.39 Aligned_cols=269 Identities=14% Similarity=0.128 Sum_probs=157.6
Q ss_pred EEecCCcchh-HHHHHHhCCcceEEEecC----------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc-
Q psy3048 33 AYASDQSNSS-VEKSAIIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF- 99 (367)
Q Consensus 33 v~~s~~~H~s-~~~~~~~~g~~v~~v~~~----------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i- 99 (367)
|+++ ..|+. +..++...|.+++.++.+ .++.+|+++|++++++... ..+.+|+++.++|++ |.+
T Consensus 125 viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~--~~~~~vi~~~~~np~gG~~~ 201 (467)
T 1ax4_A 125 VFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA--DNIVAIVSTVTCNSAGGQPV 201 (467)
T ss_dssp EEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCC
T ss_pred EEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCC--CCeeEEEEeccccCCCccCC
Confidence 4445 56644 466777788888876532 1467999999999986320 013588888899999 776
Q ss_pred --CChhhHHHHHhhcCcEEEEeccccc-cccc--------Ch-hhhhhhCC-CCCcceeeeccccccccCCcceeEEEec
Q psy3048 100 --DNLEELGPICQEYNIWLHVDAAYAG-SALL--------LP-EYAHLKRG-LEYVDSFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 100 --~dl~~I~~l~~~~gi~l~vD~a~~~-~~~~--------~~-~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
+++++|+++|++||+++|+|++|+. +.++ .+ ........ ...+|+++++.||+++.|.| |+++.++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d 280 (467)
T 1ax4_A 202 SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRD 280 (467)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESS
T ss_pred ChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCC
Confidence 5678999999999999999998764 1110 00 00000000 02358899999999987644 5555553
Q ss_pred c-hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH
Q psy3048 167 A-NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS 245 (367)
Q Consensus 167 ~-~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (367)
+ +...........+ .+.. .+ .. .......++..++..
T Consensus 281 ~~~l~~~~~~~~~~~--~~~~-------~~-------------------------------~~--~~~~~~~a~~~~l~~ 318 (467)
T 1ax4_A 281 NEEIFTLARQRCVPM--EGFV-------TY-------------------------------GG--LAGRDMAAMVQGLEE 318 (467)
T ss_dssp CHHHHHHHHHHHHHH--TCST-------TT-------------------------------TT--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc--cccc-------cc-------------------------------CC--ccchHHHHHHHHHHH
Confidence 4 4433221100001 1000 00 00 000001112223332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEE-------EcCCchHHHHHHHHH-hccCcEEEEE-eE
Q psy3048 246 YGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFR-------LKGDNDLTNQLYERL-MSHKQIYIIK-AS 316 (367)
Q Consensus 246 ~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~-------~~~~~~~~~~l~~~L-~~~g~~~~~~-~~ 316 (367)
... ++..++..++++++.+.|++ +|+++..+.....+.+. +........++.++| .++|+ .+.+ +.
T Consensus 319 ~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv-~v~~~g~ 393 (467)
T 1ax4_A 319 GTE---EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGV-RAVEIGS 393 (467)
T ss_dssp TTC---HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCE-ECEEESH
T ss_pred hhh---hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCc-eeeecCc
Confidence 211 22344455777888888877 57776655555566666 321112356788888 77774 4433 21
Q ss_pred E--------C-----CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 317 F--------Q-----GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 317 ~--------~-----~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
. . ...++|+++....++++|++++++.|++++++..
T Consensus 394 ~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 394 FLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp HHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 1 0 1369999775445889999999999999988753
No 154
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.74 E-value=1.3e-17 Score=160.06 Aligned_cols=258 Identities=8% Similarity=-0.034 Sum_probs=168.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-----------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-----------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-----------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
.-.|++...+|.++...+...|.+++.++.+ .++.+|+++|++++++.+ .+|++++++|++|.
T Consensus 109 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~nptG~ 182 (410)
T 3e2y_A 109 GDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKT------KAIILNTPHNPLGK 182 (410)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTE------EEEEEESSCTTTCC
T ss_pred CCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCc------eEEEEeCCCCCCCc
Confidence 3456677889999999999999999999875 356789999999886544 57888899999999
Q ss_pred c---CChhhHHHHHhhcCcEEEEecccccccccChhhhh--hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhh
Q psy3048 99 F---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 99 i---~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~ 172 (367)
+ +++++|+++|++||+++++|++|+.+.+....... ...+....+++..+.+|.++ .+.++|+++.+. +.+..
T Consensus 183 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~ 261 (410)
T 3e2y_A 183 VYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA-HLIKH 261 (410)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH-HHHHH
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH-HHHHH
Confidence 9 68999999999999999999999865442211000 01111122477788899997 446688877643 22221
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH------h
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS------Y 246 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~ 246 (367)
.. ....... ++ ...+....+..++.. .
T Consensus 262 ~~----~~~~~~~----------------------------------------~~---~~~~~~~a~~~~l~~~~~~~~~ 294 (410)
T 3e2y_A 262 LQ----TVQQNSF----------------------------------------YT---CATPLQAALAEAFWIDIKRMDD 294 (410)
T ss_dssp HH----HHHHTTT----------------------------------------CC---CCHHHHHHHHHHHHHHHTTTTS
T ss_pred HH----HHHHhhc----------------------------------------cC---CChHHHHHHHHHHHhhhccccc
Confidence 10 0000000 00 000112233333332 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc----------hHHHHHHHHHh-ccCcEEEEEe
Q psy3048 247 GLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN----------DLTNQLYERLM-SHKQIYIIKA 315 (367)
Q Consensus 247 ~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~----------~~~~~l~~~L~-~~g~~~~~~~ 315 (367)
..+.+++..++..++++++.+.|+++ |+.+..+.....+++.+.... ....++.+++. +.| +++.++
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-v~v~~g 372 (410)
T 3e2y_A 295 PECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKK-LTAIPV 372 (410)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHS-EECEEG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcC-EEEeCc
Confidence 24567888888999999999999998 888776655555556553210 01236666665 456 455443
Q ss_pred E-EC-------CeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 316 S-FQ-------GRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 316 ~-~~-------~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
. +. +.+++|+++.. +++++++++++|++
T Consensus 373 ~~f~~~~~~~~~~~~iRis~~~---~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 373 SAFCDSKSKPHFEKLVRFCFIK---KDSTLDAAEEIFRA 408 (410)
T ss_dssp GGGSCTTTHHHHTTEEEEECCC---CHHHHHHHHHHHHT
T ss_pred hhhCCCCCCCCCCCEEEEEEcC---CHHHHHHHHHHHHh
Confidence 2 21 24699997643 89999999999875
No 155
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.74 E-value=1.1e-16 Score=154.44 Aligned_cols=264 Identities=9% Similarity=-0.035 Sum_probs=164.4
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEE-EecCCCcccccCChh---hHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLV-ATLGTTGTCAFDNLE---ELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv-~~~~~t~~G~i~dl~---~I~ 106 (367)
-.|++.+.+|..+...++..|++++.++.++++ +|+++|++++++.. .+.+|+ ..+++|++|.+.|.+ +|+
T Consensus 125 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~ 199 (423)
T 3ez1_A 125 PKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTDP----SVKGILFVPTYSNPGGETISLEKARRLA 199 (423)
T ss_dssp CEEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSCT----TEEEEEECSSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhCC----CceEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 466778889999999999999999999997664 99999999995211 123554 447899999997776 899
Q ss_pred HHH-hhcCcEEEEecccccccccC-h-----hhhhhh--CCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 107 PIC-QEYNIWLHVDAAYAGSALLL-P-----EYAHLK--RGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 107 ~l~-~~~gi~l~vD~a~~~~~~~~-~-----~~~~~~--~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
++| ++||+++++|++|+...+.. + ...... .+....+++..+.+|++..+.++|+++... +........
T Consensus 200 ~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~~~~~~~~~- 277 (423)
T 3ez1_A 200 GLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE-DNIRWLSKY- 277 (423)
T ss_dssp TCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH-HHHHHHHHH-
T ss_pred HHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH-HHHHHHHHH-
Confidence 999 99999999999998533321 0 010000 011233688889999977678888887743 222211000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH-hh--HHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS-YG--LKGLQAY 254 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~g~~~~ 254 (367)
...... ....+....+..++.. .+ .+.+++.
T Consensus 278 ~~~~~~----------------------------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (423)
T 3ez1_A 278 LGAQSI----------------------------------------------GPNKVEQARHVKFLTEYPGGLEGLMRDH 311 (423)
T ss_dssp HHHSCS----------------------------------------------CCCHHHHHHHHHHHHHSTTHHHHHHHHH
T ss_pred Hhhhcc----------------------------------------------CCCHHHHHHHHHHHHhccchHHHHHHHH
Confidence 000000 0000111122222222 01 1222222
Q ss_pred ----HHHHHHHHHHHHHHhcCCC-CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-eE-E-----CCeeE
Q psy3048 255 ----LRKHISLAKKFADLVEKDD-RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-AS-F-----QGRPF 322 (367)
Q Consensus 255 ----~~~~~~la~~l~~~L~~~~-g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~-~-----~~~~~ 322 (367)
.++...+.+.+.+.|.+++ ++.+..+.....+++.++.. ...++.+.|.++|+ .+.+ +. + .+..+
T Consensus 312 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~~ 388 (423)
T 3ez1_A 312 AAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKLAEAAGV-SLTPAGATYPAGQDPHNRN 388 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHHHHHTTE-ECCCTTTTSSTTCCSSSCE
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHHHHHCCc-EEecCcccccCCCCCCCCe
Confidence 2334445555666666665 47776665666777887652 35678888888884 4433 21 1 23579
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 323 LRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 323 lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+|+++. ..+++++++++++|+++++++.
T Consensus 389 iRis~~--~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 389 LRLAPT--RPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp EEECCS--SSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 999763 2389999999999999988764
No 156
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.73 E-value=1e-16 Score=153.26 Aligned_cols=245 Identities=14% Similarity=0.069 Sum_probs=154.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.+|+.+...|.+...++...|.+ +..++. .|+++|++++++.+ .+|+++.+++++|
T Consensus 131 ~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~------~~v~~~~~~~~tG 199 (395)
T 1vef_A 131 KKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEET------AAVILEPVQGEGG 199 (395)
T ss_dssp CEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTE------EEEEECSEETTTT
T ss_pred CeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccCE------EEEEEeCccCCCC
Confidence 455665555555666666666664 333332 48999999987543 4677777677899
Q ss_pred ccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhh
Q psy3048 98 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNT 173 (367)
Q Consensus 98 ~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 173 (367)
.+.| +++|.++|++||+++++|++|+++............++ ..|++ +.+|++++|.++|+++.+++ ....
T Consensus 200 ~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~--s~sK~~~~g~~~G~~~~~~~-~~~~- 274 (395)
T 1vef_A 200 VRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDIL--TLAKALGGGVPLGVAVMREE-VARS- 274 (395)
T ss_dssp SEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECGGGGTTSSCEEEEEEHH-HHHT-
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEE--EEcccccCCCceEEEEehHH-HHhh-
Confidence 8877 99999999999999999999984322111111111122 34766 45999998888999998653 3322
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHH
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQA 253 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 253 (367)
+.. ... ...+ . ...+.+..+.++++.+.. ++
T Consensus 275 l~~-------~~~-----~~~~-------------------------------~---~~~~~~~a~~~al~~~~~---~~ 305 (395)
T 1vef_A 275 MPK-------GGH-----GTTF-------------------------------G---GNPLAMAAGVAAIRYLER---TR 305 (395)
T ss_dssp SCT-------TSS-----CCSS-------------------------------T---TCHHHHHHHHHHHHHHHH---HT
T ss_pred hcc-------CCc-----CCCc-------------------------------C---CCHHHHHHHHHHHHHHHh---CC
Confidence 111 000 0000 0 011122334444554432 34
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--eEEeCCCCceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeEECCeeEEEEEecCC
Q psy3048 254 YLRKHISLAKKFADLVEKDDR--FELVCPPSMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKASFQGRPFLRFVVTSP 330 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~~g--~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~ 330 (367)
+.++..++++++.+.|++++. +.. .++..+.+.+.++. + ..++.+.|. ++|+ .+.+ .+..++|+++ +.
T Consensus 306 ~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~g~~~~~~~~~-~--~~~l~~~l~~~~gi-~v~~---~~~~~iRi~~-~~ 376 (395)
T 1vef_A 306 LWERAAELGPWFMEKLRAIPSPKIRE-VRGMGLMVGLELKE-K--AAPYIARLEKEHRV-LALQ---AGPTVIRFLP-PL 376 (395)
T ss_dssp THHHHHHHHHHHHHHHHTSCCTTEEE-EEEETTEEEEEESS-C--SHHHHHHHHHHHCE-ECEE---SSTTEEEECC-CT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCceEE-EEEEEEEEEEEEcC-h--HHHHHHHHHHHCCe-EEec---CCCCEEEEeC-CC
Confidence 567788899999999988742 211 12334567777754 2 567888888 7884 3433 2456999965 56
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy3048 331 ETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~ 348 (367)
.++++|+++++++|++++
T Consensus 377 ~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 377 VIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 788999999999998874
No 157
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.73 E-value=7.6e-17 Score=157.16 Aligned_cols=262 Identities=13% Similarity=-0.015 Sum_probs=160.0
Q ss_pred eEEEecCCcchh-HHHH--HHhC--CcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 31 LVAYASDQSNSS-VEKS--AIIG--DVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s-~~~~--~~~~--g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
-.|++++.+|.+ ...+ .... +..++.++.+ +++.+|+++|++++++.. +.+|+++.++++++. |+++
T Consensus 132 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~ 204 (447)
T 3h7f_A 132 ERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAA 204 (447)
T ss_dssp CEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHH
T ss_pred CEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHH
Confidence 356666777755 1111 1122 3345555554 568899999999997542 246777667776655 9999
Q ss_pred HHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
|.++|++||+++++|++|+.+....+.... .+..+|+++.+.||++.+|.| |+++.++ +..........++...
T Consensus 205 i~~l~~~~g~lli~Dea~~~g~~~~g~~~~---~~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~~~~~~- 278 (447)
T 3h7f_A 205 FRSIADEVGAKLLVDMAHFAGLVAAGLHPS---PVPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAKAINSAVFPGQQG- 278 (447)
T ss_dssp HHHHHHHHTCEEEEECTTTHHHHHTTSSCC---STTTCSEEEEESSGGGCCCSC-EEEEECG-GGHHHHHHHHTTTTCS-
T ss_pred HHHHHHHcCCEEEEECCchhhhhcCCCCCC---CCCCCcEEEecCCcCCCCCCe-EEEEECH-HHHHHHhhhcCCcccC-
Confidence 999999999999999998665432221111 123469999999999987766 7777654 2222110000000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
. .......++.+++.....++++++.++..+++++
T Consensus 279 -------~--------------------------------------~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 313 (447)
T 3h7f_A 279 -------G--------------------------------------PLMHVIAGKAVALKIAATPEFADRQRRTLSGARI 313 (447)
T ss_dssp -------S--------------------------------------CCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred -------C--------------------------------------ccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 0 0001123444455555555778888999999999
Q ss_pred HHHHhcCC----CCeEEeCC-CCceeEEEEEcCCchHHHHHHHHHhccCcEEEE----Ee---EECCeeEEEEEecC---
Q psy3048 265 FADLVEKD----DRFELVCP-PSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII----KA---SFQGRPFLRFVVTS--- 329 (367)
Q Consensus 265 l~~~L~~~----~g~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~----~~---~~~~~~~lRi~~~~--- 329 (367)
+.+.|++. +|++++.+ ...+.+.+.+.+.......+.+.|.+.|+. +. +. ....+..+|++...
T Consensus 314 l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~-v~~~~i~~~~~~p~~~~~lRig~~~~~~ 392 (447)
T 3h7f_A 314 IADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGIT-VNRNAVPNDPRPPMVTSGLRIGTPALAT 392 (447)
T ss_dssp HHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEE-CBC-------------CEEEEECHHHHH
T ss_pred HHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeE-EecccCCCCCCCCCCCCceeccCHHHhh
Confidence 99999886 58888653 345566666644222244555666666743 32 11 11234579996521
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~ 351 (367)
...+++|++++++.|++++++.
T Consensus 393 ~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 393 RGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp HTCCHHHHHHHHHHHHHHHHSG
T ss_pred CCCCHHHHHHHHHHHHHHHhcc
Confidence 2257999999999999987754
No 158
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.73 E-value=1.3e-16 Score=162.25 Aligned_cols=268 Identities=17% Similarity=0.130 Sum_probs=172.4
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCC----c-----CHHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGV----L-----RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~----~-----d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
+.-.|++++.+|.|+..++...|+++++++++. .+. + |+++|++++++.++ .+.|.+++++++ |++|.
T Consensus 234 pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~ 311 (715)
T 3n75_A 234 AGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGL 311 (715)
T ss_dssp TTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSE
T ss_pred CCCEEEECCCccHHHHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCc
Confidence 345677899999999999999999999998752 233 3 89999999987532 112457888888 89999
Q ss_pred cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC---Cccee---eeccccccccCCcceeEEEecchhhhh
Q psy3048 99 FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE---YVDSF---AFNAHKWLLTNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~---~~D~~---~~~~hK~l~~p~g~g~l~~~~~~~~~~ 172 (367)
+.|+++|+++|++++ +++|+||+++..+.+.... ...+. .+|.+ +.++||++.++.++|++++++.....
T Consensus 312 v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~-~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~- 387 (715)
T 3n75_A 312 LYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG-KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEE- 387 (715)
T ss_dssp EECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT-SSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHH-
T ss_pred cCCHHHHHHHhCcCc--EEEccccccccccCCcccc-ccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHH-
Confidence 999999999999774 7999999987644443321 01121 25765 89999999999999999997641111
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHH
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQ 252 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 252 (367)
.+.....++. +++++| ....++-++++.+..+.-.
T Consensus 388 ~~~~~~~~~~-------STSpsy--------------------------------------~~~AsldaA~~~~~~~~g~ 422 (715)
T 3n75_A 388 TFNEAYMMHT-------TTSPHY--------------------------------------GIVASTETAAAMMKGNAGK 422 (715)
T ss_dssp HHHHHHHHTS-------CSSCCH--------------------------------------HHHHHHHHHHHHHSHHHHH
T ss_pred HHHHHHHhhc-------CCCchH--------------------------------------HHHHHHHHHHHHHHhhccH
Confidence 1111111111 112222 1123444555555432225
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC------eEEeCCCC-----------------------------ceeEEEEEcCC----
Q psy3048 253 AYLRKHISLAKKFADLVEKDDR------FELVCPPS-----------------------------MGLVCFRLKGD---- 293 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g------~~~~~~~~-----------------------------~~~v~f~~~~~---- 293 (367)
+++++..+++++++++|+++++ ++++.+.. ..-+++..++.
T Consensus 423 ~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G 502 (715)
T 3n75_A 423 RLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDG 502 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCC
Confidence 5778899999999999988754 56654321 12233443321
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
.....++.+.|.+.| +.+..+... ..+ + +.++..+++++++++++|.++.+...
T Consensus 503 ~~~~~Gi~g~~~~~~L~~~~-I~~E~~d~~--~vl-~-l~s~g~~~~~~~~L~~aL~~~~~~~~ 561 (715)
T 3n75_A 503 TMSDFGIPASIVAKYLDEHG-IVVEKTGPY--NLL-F-LFSIGIDKTKALSLLRALTDFKRAFD 561 (715)
T ss_dssp CBCSSCCCHHHHHHHHHHTT-CCCSEEETT--EEE-E-ECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcHHHHHHHHHHCC-CEEEecCCC--cEE-E-EeCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 112346777776666 444333222 223 2 35678899999999999999876543
No 159
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=2.5e-16 Score=150.41 Aligned_cols=245 Identities=12% Similarity=0.070 Sum_probs=152.8
Q ss_pred ceEEEecCCcchhHHHHH-HhCCc------------ceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc
Q psy3048 30 RLVAYASDQSNSSVEKSA-IIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT 96 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~-~~~g~------------~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~ 96 (367)
+-.|++...+|.+....+ ...+. .+..++.+ |+++|++++++.+ .+|++++++|++
T Consensus 127 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~------~~v~~~~~~npt 195 (392)
T 3ruy_A 127 RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPNT------AAFILEPIQGEA 195 (392)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTTE------EEEEECSSBSTT
T ss_pred CcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhccCe------EEEEEeCccCCC
Confidence 445666666765544433 32221 24444432 8999999997544 588888999999
Q ss_pred cccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhh
Q psy3048 97 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLT 171 (367)
Q Consensus 97 G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~ 171 (367)
|.+.| +++|.++|++||+++++|++|+++............++ ..|+++++ |++.++ ..+|+++.++ +...
T Consensus 196 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~~ 271 (392)
T 3ruy_A 196 GINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANR-DILG 271 (392)
T ss_dssp TSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHHT
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHHh
Confidence 99988 99999999999999999999975432211111111222 34777775 987653 4588887743 3222
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGL 251 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 251 (367)
. +. .... ... ++ ...+.+..+.++++.+..
T Consensus 272 ~-~~-------~~~~-----~~~-------------------------------~~---~~~~~~~a~~~~l~~~~~--- 301 (392)
T 3ruy_A 272 V-FE-------PGSH-----GST-------------------------------FG---GNPLACAVSIAALEVLEE--- 301 (392)
T ss_dssp T-CC-------TTSS-----CCS-------------------------------ST---TCHHHHHHHHHHHHHHHH---
T ss_pred h-hc-------cCCc-----CCC-------------------------------CC---CCHHHHHHHHHHHHHHHh---
Confidence 1 10 0000 000 00 011122333344443322
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 252 QAYLRKHISLAKKFADLVEKD--DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~--~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
++..++..++++++.+.|+++ +.+... ++..+.+.+.+++ ...++.+.|.++|+ .+.+. +..++|+++ .
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~---~~~~l~~~l~~~gi-~v~~~---~~~~iRi~~-~ 372 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNE---PARPYCEQLKAAGL-LCKET---HENVIRIAP-P 372 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESS---CSHHHHHHHHTTTE-ECCCB---TTTEEEECC-C
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcc---hHHHHHHHHHHCCc-EEecC---CCCEEEEEC-C
Confidence 567778889999999999887 334433 2345566666653 35688899998884 34322 346999965 5
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~ 348 (367)
..++++|+++++++|++++
T Consensus 373 ~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 373 LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 6778999999999999875
No 160
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.73 E-value=5.1e-17 Score=157.05 Aligned_cols=259 Identities=9% Similarity=-0.029 Sum_probs=161.4
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEE-EecCCCcccccCChh---hHHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLV-ATLGTTGTCAFDNLE---ELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv-~~~~~t~~G~i~dl~---~I~~ 107 (367)
.|++.+.+|..+...++..|++++.++.++++ +|+++|++++++.. +.+|+ +++++|+||.+.|.+ +|++
T Consensus 133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~-----~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDPQ-----VKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTSTT-----EEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcCC-----CeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 57777889999999999999999999987665 99999999986421 23544 678999999997776 8888
Q ss_pred HHh-hcCcEEEEecccccccccCh-----hhhhh--hCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcc
Q psy3048 108 ICQ-EYNIWLHVDAAYAGSALLLP-----EYAHL--KRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRV 179 (367)
Q Consensus 108 l~~-~~gi~l~vD~a~~~~~~~~~-----~~~~~--~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 179 (367)
+|+ +||+++++|++|+.+.+..+ ..... ..+....+++..+.+|++..+.++|+++.+ ++.+....... .
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~-~~l~~~l~~~~-~ 284 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASS-KENIEWYASHA-N 284 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECC-HHHHHHHHHHH-H
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeC-HHHHHHHHHHH-H
Confidence 898 99999999999974222111 11000 011222368888899995444568888875 33232211000 0
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-----HHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-----KGLQAY 254 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~~~~ 254 (367)
... ++ . ..+...++...+.. +.+++.
T Consensus 285 ~~~-------------------------------------------~~---~---~~~~q~a~~~~l~~~~~~~~~~~~~ 315 (422)
T 3d6k_A 285 VRG-------------------------------------------IG---P---NKLNQLAHAQFFGDVAGLKAHMLKH 315 (422)
T ss_dssp HHC-------------------------------------------SC---C---CHHHHHHHHHHHCSHHHHHHHHHHH
T ss_pred hhc-------------------------------------------CC---C---CHHHHHHHHHHHhCcchHHHHHHHH
Confidence 000 00 0 01222222222222 223444
Q ss_pred HHHHHHHHHHHHHHh----cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-eE-E-----CCeeEE
Q psy3048 255 LRKHISLAKKFADLV----EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-AS-F-----QGRPFL 323 (367)
Q Consensus 255 ~~~~~~la~~l~~~L----~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~-~-----~~~~~l 323 (367)
.++..+..+++.+.| .+++++.+..|.....++++++.. ...++.+.|.++|+ .+.+ +. + .+..++
T Consensus 316 ~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gV-~v~~~g~~f~~~~~~~~~~i 392 (422)
T 3d6k_A 316 AASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVELAKEAGI-ALTGAGSSFPLHNDPNNENI 392 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHHHHHHCCe-EEEcCccccCCCCCCCCCeE
Confidence 444444444444444 445456765555556677777642 24567777888884 4444 22 2 135799
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 324 RFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 324 Ri~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
|+++. . ++++++++++++|+++++++.
T Consensus 393 Ris~~-~-~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 393 RLAPS-L-PPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp EECCS-S-SCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecC-C-CCHHHHHHHHHHHHHHHHHHH
Confidence 99764 3 789999999999999988764
No 161
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.73 E-value=9.5e-17 Score=155.28 Aligned_cols=259 Identities=10% Similarity=-0.048 Sum_probs=162.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHH-HHhhCCCccEEEEEe-cCCCcccccCChh---hH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVK-EDLAKGLIPCCLVAT-LGTTGTCAFDNLE---EL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~-~~~t~~G~i~dl~---~I 105 (367)
-.|++.+.+|.++...++..|++++.+++++++ +|+++|+++++ +.+ .+|+++ +++|+||.+-|.+ +|
T Consensus 134 d~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~------~~v~~~p~~~NPtG~~~~~~~~~~l 206 (427)
T 3ppl_A 134 VKWICPVPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNPQV------KGMWVVPVFSNPTGFTVTEDVAKRL 206 (427)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTSTTE------EEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcCCC------eEEEECCCCCCCCCccCCHHHHHHH
Confidence 456677889999999999999999999997665 99999999984 233 355544 7899999997777 89
Q ss_pred HHHH-hhcCcEEEEecccccccccChh-----hhhhh--CCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 106 GPIC-QEYNIWLHVDAAYAGSALLLPE-----YAHLK--RGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 106 ~~l~-~~~gi~l~vD~a~~~~~~~~~~-----~~~~~--~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
+++| ++||+++++|++|+.+.+.... ..... .+....++++.+.+|++..+.++|+++... .........
T Consensus 207 ~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~-~l~~~~~~~- 284 (427)
T 3ppl_A 207 SAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA-ENRKWYTGH- 284 (427)
T ss_dssp HHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH-HHHHHHHHH-
T ss_pred HHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH-HHHHHHHHH-
Confidence 9999 9999999999999875442211 11000 012234788889999976667788777642 222211000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-----HHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-----KGLQ 252 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~~ 252 (367)
..+... .. ..+...++...+.. +.++
T Consensus 285 ~~~~~~----------------------------------------------~~---~~~~q~~~~~~l~~~~~~~~~~~ 315 (427)
T 3ppl_A 285 AGIRGI----------------------------------------------GP---NKVNQLAHARYFGDAEGVRAVMR 315 (427)
T ss_dssp HHHHCS----------------------------------------------CC---CHHHHHHHHHHHCSHHHHHHHHH
T ss_pred hhcccC----------------------------------------------CC---CHHHHHHHHHHHhChhhHHHHHH
Confidence 000000 00 01122222222211 2233
Q ss_pred HHHHHH----HHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEE-eE-E-----CCee
Q psy3048 253 AYLRKH----ISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIK-AS-F-----QGRP 321 (367)
Q Consensus 253 ~~~~~~----~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~-~-----~~~~ 321 (367)
+..++. ..+.+.+.+.+..++++.+..|.....++++++.. ...++.+.|.++|+ .+.+ +. + .+..
T Consensus 316 ~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~ 392 (427)
T 3ppl_A 316 KHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELAKEAGI-ALTGAGSSYPLRQDPENK 392 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHHHHCCC-EEecCcCcCCCCCCCCCC
Confidence 333333 34444445555555567766665666677777642 35678888888884 4433 21 1 2467
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
++|+++. ..++++++.++++|.++++++.
T Consensus 393 ~~Ris~~--~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 393 NLRLAPS--LPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp EEEECCS--SSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999763 3379999999999999988753
No 162
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.73 E-value=1.4e-16 Score=157.48 Aligned_cols=269 Identities=12% Similarity=0.009 Sum_probs=168.0
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|+++...|.++..++...|++++.+++++ ++.+|+++|++++++...+ ..+.+|++++++|+||.+ +++++|
T Consensus 182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v~s~~~l~~i 260 (498)
T 3ihj_A 182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDV 260 (498)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCcCCHHHHHHH
Confidence 4788889999999999999999999999864 5799999999999875321 124577888999999999 457789
Q ss_pred HHHHhhcCcEEEEecccccccccCh----hhhhhhCCC-----CCcc-eeeeccccccc--cCCcceeEEE--ecchhhh
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP----EYAHLKRGL-----EYVD-SFAFNAHKWLL--TNHDCSAMWV--KNANHLT 171 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~----~~~~~~~~~-----~~~D-~~~~~~hK~l~--~p~g~g~l~~--~~~~~~~ 171 (367)
+++|++||+++++|++|+.+.+... .+......+ .... ++..+.+|.+. ....+|++.+ .++....
T Consensus 261 ~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~ 340 (498)
T 3ihj_A 261 IHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKG 340 (498)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHH
T ss_pred HHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHH
Confidence 9999999999999999987655321 111111000 0112 45567899995 4466777765 3443332
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH------
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS------ 245 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 245 (367)
........+. . +.......+..++..
T Consensus 341 ~l~~~~~~~~----------~--------------------------------------~~~~~q~a~~~~l~~~~~g~~ 372 (498)
T 3ihj_A 341 QLVKLLSVRL----------C--------------------------------------PPVSGQAAMDIVVNPPVAGEE 372 (498)
T ss_dssp HHHHHHHHSC----------C--------------------------------------CCHHHHHHHHHHTCCCCTTST
T ss_pred HHHHHHhccC----------C--------------------------------------CCHHHHHHHHHHhcCCccCcc
Confidence 2110000000 0 000001111111110
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEE-EEcCCch----------HHHH--HHHHHhccCc
Q psy3048 246 ---YGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCF-RLKGDND----------LTNQ--LYERLMSHKQ 309 (367)
Q Consensus 246 ---~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f-~~~~~~~----------~~~~--l~~~L~~~g~ 309 (367)
...+...++.++..+.++++.+.|+++||+++..+ ..+++.| ++..... ...+ +.+.|.+.|+
T Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p-~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI 451 (498)
T 3ihj_A 373 SFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPL-QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGI 451 (498)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCB
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCC-CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCE
Confidence 00122355667788999999999999999987644 4444443 4432111 1233 3444556775
Q ss_pred EEEEEeEE---CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 310 IYIIKASF---QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 310 ~~~~~~~~---~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
....++.+ .+..++|+++. .++++++.++++|.+++++..
T Consensus 452 ~v~pG~~f~~~~~~~~~Ris~~---~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 452 CVVPGSGFGQREGTYHFRMTIL---PPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp CCEEGGGTCCCTTCCBEEEECC---SCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcccCCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHHH
Confidence 44332221 34568999763 579999999999999988764
No 163
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.72 E-value=6.9e-17 Score=157.22 Aligned_cols=260 Identities=13% Similarity=0.017 Sum_probs=165.2
Q ss_pred eEEEecCCcchhHHHHHHhCCcc----------eEEEecCCC--CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVP----------VRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~----------v~~v~~~~~--~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
-.|++++.+|.++..+++..|.+ ++.++++++ ...+++++ +. +.+|++++++|++|.
T Consensus 156 d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~v~l~~p~NPtG~ 224 (449)
T 3qgu_A 156 PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KR------TDIIFFCSPNNPTGA 224 (449)
T ss_dssp SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CC------CSEEEEESSCTTTCC
T ss_pred CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CC------CCEEEEeCCCCCCCC
Confidence 35667789999999999999988 999998643 34443221 12 347777899999999
Q ss_pred cCC---hhhHHHHHhhcCcEEEEecccccccccChh-hhh-hhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhh
Q psy3048 99 FDN---LEELGPICQEYNIWLHVDAAYAGSALLLPE-YAH-LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 99 i~d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~-~~~-~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~ 172 (367)
+.+ +++|+++|++||+++++|++|+.+.+.... ... .+.+....++++.+.+|+++ .+.++|+++.++.. ...
T Consensus 225 ~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~-~~~ 303 (449)
T 3qgu_A 225 AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKAL-KYA 303 (449)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTC-BCT
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHH-Hhh
Confidence 854 888889999999999999999875443210 000 01111234788999999997 55678888875431 110
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh---hHH
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY---GLK 249 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~ 249 (367)
. ..... . .|... ........ ..+...+++..+ +.+
T Consensus 304 ~---~~~~~-~---------------~~~~~--------------------~~~~~~~~---~~~~~~a~~~~l~~~~~~ 341 (449)
T 3qgu_A 304 N---GEPVH-A---------------DWNRV--------------------MTTCFNGA---SNIVQAGGLACLQPEGLK 341 (449)
T ss_dssp T---SCBHH-H---------------HHHHH--------------------HHHSCCCC---CHHHHHHHHHHTSHHHHH
T ss_pred h---hhhHH-H---------------HHHHH--------------------hhcccCCC---CHHHHHHHHHHHhhcCHH
Confidence 0 00000 0 00000 00000001 112333333333 335
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---CCeeEEEE
Q psy3048 250 GLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF---QGRPFLRF 325 (367)
Q Consensus 250 g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~lRi 325 (367)
.+++..++..++++++.+.|+++ |+++..+.....+.+.++ .....++.++|.++ | +++.++.. .+..++|+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g-I~v~pg~~f~~~~~~~iRi 417 (449)
T 3qgu_A 342 EMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFP--GKPSWDVFAEILERCN-IVTTPGSGYGPAGEGFVRA 417 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECT--TSCHHHHHHHHHHHHC-EECEEGGGGCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECC--CCCHHHHHHHHHHHCC-EEEecchHhCCCCCCeEEE
Confidence 67788888999999999999987 888776555666777765 22356888888876 6 45544322 23579999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 326 VVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 326 ~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
++. .+++|+++++++|++++++-
T Consensus 418 s~~---~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 418 SAF---GSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp ECC---SCHHHHHHHHHHHHHHHC--
T ss_pred Eec---CCHHHHHHHHHHHHHHHHhc
Confidence 743 38999999999999987653
No 164
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.72 E-value=1e-16 Score=153.48 Aligned_cols=248 Identities=14% Similarity=0.134 Sum_probs=158.4
Q ss_pred ceEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.+|+.+...|.+...++...|.+ ++.++.+ |+++|++++++.+ .+|++++++|++|
T Consensus 129 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~~------~~v~~~~~~nptG 197 (397)
T 2ord_A 129 YRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSEDV------CAVFLEPIQGESG 197 (397)
T ss_dssp CEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTTE------EEEEECSEECTTT
T ss_pred ceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcCe------EEEEEecccCCCC
Confidence 456666666777777677777765 6667653 8999999987543 5888899999999
Q ss_pred c----cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhh
Q psy3048 98 A----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNT 173 (367)
Q Consensus 98 ~----i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 173 (367)
. .+++++|.++|++||+++++|++|++.............+. ..|++++ +|+++++.++|+++.+++. . .
T Consensus 198 ~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~ 271 (397)
T 2ord_A 198 IVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--V 271 (397)
T ss_dssp CEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--C
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--c
Confidence 8 37899999999999999999999975322211111111122 2476654 7999977779998886531 1 1
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHH
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQA 253 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 253 (367)
+. .... ...| . ...+.+..+.++++.+.. ++
T Consensus 272 l~-------~~~~-----~~~~-------------------------------~---~~~~~~~a~~~~l~~~~~---~~ 302 (397)
T 2ord_A 272 LE-------PGDH-----GTTF-------------------------------G---GNPLACRAGVTVIKELTK---EG 302 (397)
T ss_dssp CC-------TTSS-----CCSS-------------------------------T---TCHHHHHHHHHHHHHHTS---TT
T ss_pred cC-------CCCc-----CCCC-------------------------------C---CCHHHHHHHHHHHHHHHh---CC
Confidence 10 0000 0000 0 011222334445554433 34
Q ss_pred HHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 254 YLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
..++..++++++.+.|+++ +.+... ++..+.+.+.++. .....++.+.|.++|+ .+.+. ++.++|+++ .
T Consensus 303 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~---~~~~iRis~-~ 375 (397)
T 2ord_A 303 FLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFRE-EVSNREVATKCFENKL-LVVPA---GNNTIRFLP-P 375 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECT-TSCHHHHHHHHHHTTE-ECEEE---TTTEEEECC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECC-hHHHHHHHHHHHHCCC-EEccC---CCCEEEEEC-C
Confidence 5667778888888888664 322211 2334566777754 2235688889988884 34333 356899965 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~ 350 (367)
..++++|+++++++|++++++
T Consensus 376 ~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 376 LTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhh
Confidence 567899999999999998764
No 165
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.72 E-value=1e-16 Score=155.73 Aligned_cols=288 Identities=11% Similarity=0.009 Sum_probs=160.2
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
.-.|+++..+|.+...++...|++++.++.+. ++.+|+++|++++++.+ .+|++++ ++|...|+++|.++
T Consensus 110 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~------~~v~~~~---~~g~~~~~~~i~~l 180 (437)
T 3bb8_A 110 GDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKT------KAIMIAH---TLGNLFDLAEVRRV 180 (437)
T ss_dssp TCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTE------EEEEEEC---GGGCCCCHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCC------eEEEEeC---CCCChhcHHHHHHH
Confidence 34678889999999999999999999999875 78999999999987654 4666664 57888999999999
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCcccccc---C-
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKH---T- 184 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~---~- 184 (367)
|++||+++++|++|+.+..... .. .+ ...|+++.+.+|....|.|.|.+++.++..+.........+-.. +
T Consensus 181 ~~~~~~~li~D~a~~~g~~~~~--~~--~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (437)
T 3bb8_A 181 ADKYNLWLIEDCCDALGSTYDG--KM--AG-TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAP 255 (437)
T ss_dssp HHHHTCEEEEECTTCTTCEETT--EE--TT-SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----
T ss_pred HHHcCCEEEEECccccCceECC--ee--cc-cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccc
Confidence 9999999999999986544311 11 11 12477666532222123344444444433332211100011000 0
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
..+. .....+ .+ .....|..+.+ .++. .......+...+...+++.. .+.+.+..++.++++++
T Consensus 256 ~~~~-~~~~~~---~~--~~~~~~~~~~~----~~~~----~~~g~~~~~~~~~aa~~l~~--l~~~~~~~~~~~~~~~~ 319 (437)
T 3bb8_A 256 GCDN-TCKKRF---GQ--QLGSLPFGYDH----KYTY----SHLGYNLKITDMQAACGLAQ--LERIEEFVEKRKANFKY 319 (437)
T ss_dssp ------------------CCSCCCTTCCG----GGCB----CSCCCBCCCBHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred cccc-cccccc---cc--ccccccccccc----cccc----cccCcccCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 0000 000000 00 00000000000 0000 00000001112232223332 23446677778899999
Q ss_pred HHHHhcCCCCeEEeCCC------CceeEEEEEcCC-chHHHHHHHHHhccCcEEEEEeEE----------------C---
Q psy3048 265 FADLVEKDDRFELVCPP------SMGLVCFRLKGD-NDLTNQLYERLMSHKQIYIIKASF----------------Q--- 318 (367)
Q Consensus 265 l~~~L~~~~g~~~~~~~------~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~----------------~--- 318 (367)
+.+.|++++|+.++... ....+.+.+... .....++.+.|.++|+. +..... .
T Consensus 320 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~-v~~~~~~~~~~~p~~~~~~~~~~~~~ 398 (437)
T 3bb8_A 320 LKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVG-TRLLFAGNLTRQPYFHDVKYRVVGEL 398 (437)
T ss_dssp HHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBC-CBCCTTSSGGGSGGGSSCCCEECSCC
T ss_pred HHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCc-eeccCCcccccCchhhccCccccCCC
Confidence 99999998887665321 111223333211 12356889999988853 221100 0
Q ss_pred ------CeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 319 ------GRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 319 ------~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
....+|++ .++++|++||++++++|+++++
T Consensus 399 ~~~~~~~~~~lrl~-~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 399 TNTDRIMNQTFWIG-IYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHHEEEEC-CSTTCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHhcCEEEec-CCCCCCHHHHHHHHHHHHHHHc
Confidence 01259995 5789999999999999998743
No 166
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.71 E-value=2.3e-16 Score=152.28 Aligned_cols=243 Identities=13% Similarity=0.077 Sum_probs=161.8
Q ss_pred eEEEecCCcchhHHHHHHh----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+....+.. .|+++++++.+ |+++|++++++.+ .+|++..++|++|.+.|+++|+
T Consensus 121 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~ 189 (414)
T 3ndn_A 121 DRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-----DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVT 189 (414)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHH
Confidence 3566677889887777654 89999999875 8999999997655 3788899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLKHT 184 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~ 184 (367)
++|++||+++++|++|+.+.+..+. ..+ +|+++.+.+|+++++.. +|+++.++. .+...+.......
T Consensus 190 ~la~~~g~~livDe~~~~~~~~~~~----~~g---~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~--- 258 (414)
T 3ndn_A 190 ELAHAAGAKVVLDNVFATPLLQQGF----PLG---VDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHT--- 258 (414)
T ss_dssp HHHHHTTCEEEEECTTTHHHHCCCG----GGT---CSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHH---
T ss_pred HHHHHcCCEEEEECCCcccccCCch----hcC---CCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHc---
Confidence 9999999999999999865433221 113 49999999999976432 677776443 2221110000000
Q ss_pred CCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy3048 185 DAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 264 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~ 264 (367)
+..+..+..+.+++ +.+.+..++++..+++++
T Consensus 259 ----------------------------------------------g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~ 290 (414)
T 3ndn_A 259 ----------------------------------------------GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQR 290 (414)
T ss_dssp ----------------------------------------------CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 00011233344333 455677788888999999
Q ss_pred HHHHhcCCCCeEEe-CCC----------------CceeEEEEEcCC----chHHHHHHHHHhccCcEE---------EEE
Q psy3048 265 FADLVEKDDRFELV-CPP----------------SMGLVCFRLKGD----NDLTNQLYERLMSHKQIY---------IIK 314 (367)
Q Consensus 265 l~~~L~~~~g~~~~-~~~----------------~~~~v~f~~~~~----~~~~~~l~~~L~~~g~~~---------~~~ 314 (367)
+.+.|+++|++.-+ .|. ..++++|.+++. .....++.+.|...+... ..|
T Consensus 291 l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p 370 (414)
T 3ndn_A 291 IAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHP 370 (414)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred HHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCc
Confidence 99999999887643 331 235788988763 334567777776444110 000
Q ss_pred eE--------------ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy3048 315 AS--------------FQGRPFLRFVVTSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 315 ~~--------------~~~~~~lRi~~~~~~~~~edid~li~~l~~~~ 348 (367)
.. -..+.++|+|+. .||++.+++.|++.+
T Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~iRlsvG-----~e~~~dli~dl~~al 413 (414)
T 3ndn_A 371 ATTTHRAMGPEGRAAIGLGDGVVRISVG-----LEDTDDLIADIDRAL 413 (414)
T ss_dssp GGTTTCTTHHHHHHHTTCCTTEEEEECC-----SSCHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeC-----cCCHHHHHHHHHHhh
Confidence 00 012458999764 367788888887764
No 167
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.71 E-value=6.2e-16 Score=147.98 Aligned_cols=119 Identities=16% Similarity=0.151 Sum_probs=96.6
Q ss_pred ceEEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
.-.|++++..|.+.... ++..|++++.++.. |+++|++++++.+ .+|++++++|++|.+.|+++|
T Consensus 98 gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i 166 (389)
T 3acz_A 98 GDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTS-----DVEKVKAAWKPNT------KMVYLESPANPTCKVSDIKGI 166 (389)
T ss_dssp TCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTT-----CHHHHHHTCCTTE------EEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCCCCCeecCHHHH
Confidence 34577778899987666 46689999999863 8999999987654 488889999999999999999
Q ss_pred HHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEec
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKN 166 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~ 166 (367)
.++|++||+++++|++|+.+....+ .. . .+|+++.+.||++++|.+ +|+++.++
T Consensus 167 ~~~~~~~~~~livD~~~~~~~~~~~-~~---~---~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 167 AVVCHERGARLVVDATFTSPCFLKP-LE---L---GADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp HHHHHHHTCEEEEECTTTCTTTCCG-GG---T---TCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred HHHHHHcCCEEEEECCCccccccCc-cc---c---CCeEEEECChhhccCCCCceeEEEEECc
Confidence 9999999999999999987643211 11 1 359999999999999877 68888765
No 168
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.71 E-value=3.2e-16 Score=148.55 Aligned_cols=211 Identities=13% Similarity=0.101 Sum_probs=136.1
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
+|+++|++++++.+ .+|++++++|++|.+.| +++|.++|++||+++++|++|+++............+.
T Consensus 160 ~d~~~l~~~l~~~~------~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~- 232 (375)
T 2eh6_A 160 NDIDSVYKLLDEET------AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNL- 232 (375)
T ss_dssp TCHHHHHTTCCTTE------EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-
T ss_pred chHHHHHHHhcCCe------EEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCC-
Confidence 48999999886543 57888889999999988 99999999999999999999985322111111111121
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
..|+++++ |++++|.++|++++++ +.... +. ... ..
T Consensus 233 ~~d~~s~S--K~~~~g~~~G~~~~~~-~~~~~-~~--~~~--~~------------------------------------ 268 (375)
T 2eh6_A 233 KPDVIALA--KGLGGGVPIGAILARE-EVAQS-FT--PGS--HG------------------------------------ 268 (375)
T ss_dssp CCSEEEEC--GGGGTTSCCEEEEEEH-HHHTT-CC--TTS--CC------------------------------------
T ss_pred CCCEEEEc--ccccCCCCeEEEEEcH-HHHhh-hc--CCC--CC------------------------------------
Confidence 35888766 9988888999999865 32221 11 000 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHH
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQL 300 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l 300 (367)
..+. ...+.+..+.++++... +..++..++++++.+.|++++...+ ++..+.+.+.++. + ..++
T Consensus 269 ---~~~~---~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~-~--~~~~ 332 (375)
T 2eh6_A 269 ---STFG---GNPLACRAGTVVVDEVE-----KLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELER-E--CKDY 332 (375)
T ss_dssp ---CSST---TCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSS-C--CHHH
T ss_pred ---CCCC---CCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcC-c--HHHH
Confidence 0000 01111122223333321 6677888999999999988754222 2344566777653 2 4678
Q ss_pred HHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 301 YERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 301 ~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.+.|.++|+ .+.+. +..++|+++ +..++++|+++++++|+++
T Consensus 333 ~~~l~~~gi-~~~~~---~~~~iRi~~-~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 333 VLKALEKGL-LINCT---AGKVLRFLP-PLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp HHHHHHTTE-ECEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-EEecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHh
Confidence 888888884 34332 356899965 4577899999999999875
No 169
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.71 E-value=1.6e-16 Score=153.31 Aligned_cols=244 Identities=14% Similarity=0.128 Sum_probs=159.2
Q ss_pred eEEEecCCcchhHHHHH----HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 31 LVAYASDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~----~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
-.|++++..|.+....+ ...|+++++++.+ |+++|++++++++ .+|++.+++|++|.+.|+++|+
T Consensus 122 d~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~~~t------klV~~e~~~NptG~v~dl~~I~ 190 (415)
T 2fq6_A 122 DHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIV 190 (415)
T ss_dssp CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhccCC------cEEEEECCCCCCCEeecHHHHH
Confidence 35666788998877654 3468999999764 8899999997765 4888899999999999999999
Q ss_pred HHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--ceeEEEecchhhhhhccCCccccc
Q psy3048 107 PICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--CSAMWVKNANHLTNTFFTDRVYLK 182 (367)
Q Consensus 107 ~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~ 182 (367)
++||+ ||+++++|++|+.+.... ... .+ +|+++.++||+++++.+ .|+++.++ ..+..... +..
T Consensus 191 ~la~~~~~g~~livD~a~a~~~~~~-p~~---~g---~Div~~S~sK~lg~~g~~~~G~l~~~~-~~~~~l~~----~~~ 258 (415)
T 2fq6_A 191 AAVRSVVPDAIIMIDNTWAAGVLFK-ALD---FG---IDVSIQAATKYLVGHSDAMIGTAVCNA-RCWEQLRE----NAY 258 (415)
T ss_dssp HHHHHHCTTCEEEEECTTTTTTSSC-GGG---GT---CSEEEEETTTTTTCSSSCCCEEEEECT-TTHHHHHH----HHH
T ss_pred HHHHhhcCCCEEEEECCCcccccCC-ccc---cC---CeEEEEeCccccCCCCCceEEEEEeCH-HHHHHHHH----HHH
Confidence 99999 999999999998653322 111 13 49999999999987754 57777654 33322110 000
Q ss_pred cCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3048 183 HTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLA 262 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la 262 (367)
.. ... ......+..++ +.+.+..++++..+++
T Consensus 259 ~~------------------------------------------G~~----~~~~~a~~~~~--~l~~l~~r~~~~~~n~ 290 (415)
T 2fq6_A 259 LM------------------------------------------GQM----VDADTAYITSR--GLRTLGVRLRQHHESS 290 (415)
T ss_dssp HT------------------------------------------TCC----CCHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred hc------------------------------------------CCC----CCHHHHHHHHh--hhhHHHHHHHHHHHHH
Confidence 00 000 01122233222 3345566777788888
Q ss_pred HHHHHHhcCCCCeEE-eCCC----------------CceeEEEEEcCC--chHHHHHHHHHhccC------c---EEEE-
Q psy3048 263 KKFADLVEKDDRFEL-VCPP----------------SMGLVCFRLKGD--NDLTNQLYERLMSHK------Q---IYII- 313 (367)
Q Consensus 263 ~~l~~~L~~~~g~~~-~~~~----------------~~~~v~f~~~~~--~~~~~~l~~~L~~~g------~---~~~~- 313 (367)
+++.+.|++.|.+.- ..|. ..++++|.+++. ......+.+.|...+ . ....
T Consensus 291 ~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~ 370 (415)
T 2fq6_A 291 LKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILAN 370 (415)
T ss_dssp HHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEE
T ss_pred HHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEec
Confidence 999999988877643 2221 357889998752 234456666553222 0 1111
Q ss_pred -E---eE------E-CCeeEEEEEecCCCCCHHHHHHHHHHHHH
Q psy3048 314 -K---AS------F-QGRPFLRFVVTSPETNQCDVAFAWNEISH 346 (367)
Q Consensus 314 -~---~~------~-~~~~~lRi~~~~~~~~~edid~li~~l~~ 346 (367)
| +. . ...+.+|+|+ ...+++++|+.+.++|++
T Consensus 371 ~p~~~s~~~~~~~~g~~~~~iRlS~-G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 371 QPEHIAAIRPQGEIDFSGTLIRLHI-GLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CHHHHHTTCTTCCCCCCSCEEEEEC-CSSCHHHHHHHHHHHHHT
T ss_pred CCCccccccchhhcCCCCCEEEEEe-cCCCHHHHHHHHHHHHHh
Confidence 1 00 0 1246999987 577788888888888864
No 170
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.71 E-value=1.6e-16 Score=152.28 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=155.6
Q ss_pred EEEecCCcchhHHHH----HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH
Q psy3048 32 VAYASDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP 107 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~----~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~ 107 (367)
.|+++...|.+.... ++..|++++.++++ | ++|++++++.+ .+|++.+++|++|.+.|+++|.+
T Consensus 95 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~~~t------~lv~~~~~~nptG~~~~l~~i~~ 162 (393)
T 1n8p_A 95 HAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-----L-NDLPQLIKENT------KLVWIETPTNPTLKVTDIQKVAD 162 (393)
T ss_dssp EEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH-----H-HHHHHHSCSSE------EEEEECSSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcccCc------eEEEEECCCCCcceecCHHHHHH
Confidence 456666788865553 45579999999875 7 88988886544 58888999999999999999999
Q ss_pred HHhhc----CcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCc--c-eeEEEecchhhhhhccCCccc
Q psy3048 108 ICQEY----NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHD--C-SAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 108 l~~~~----gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~-g~l~~~~~~~~~~~~~~~~~y 180 (367)
+|++| |+++++|++|+.+.+. +... .+ +|+++.++||+++. +| . |+++.+++..+....... ..
T Consensus 163 la~~~~~~~~~~livD~a~~~~~~~-~~~~---~~---~di~~~S~sK~~g~-~G~rigG~~~~~~~~~~~~l~~~~-~~ 233 (393)
T 1n8p_A 163 LIKKHAAGQDVILVVDNTFLSPYIS-NPLN---FG---ADIVVHSATKYING-HSDVVLGVLATNNKPLYERLQFLQ-NA 233 (393)
T ss_dssp HHHHHTTTTTCEEEEECTTTHHHHC-CGGG---GT---CSEEEEETTTTTTC-SSCCCCEEEEESCHHHHHHHHHHH-HH
T ss_pred HHHHhCCCCCCEEEEeCCccccccC-CHHH---cC---CeEEEEECcccccC-CCCceeEEEEeCCHHHHHHHHHHH-Hh
Confidence 99999 9999999999877653 2111 12 59999999999874 45 5 776665444333221000 00
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHIS 260 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~ 260 (367)
. + .. ......++.+.. .+.+....++..+
T Consensus 234 ~--g-------------------------------------------~~----~~~~~~~~~~~~--l~~~~~~~~~~~~ 262 (393)
T 1n8p_A 234 I--G-------------------------------------------AI----PSPFDAWLTHRG--LKTLHLRVRQAAL 262 (393)
T ss_dssp H--C-------------------------------------------CC----CCHHHHHHHHHH--HTTHHHHHHHHHH
T ss_pred c--C-------------------------------------------CC----CCHHHHHHHHhc--cchHHHHHHHHHH
Confidence 0 0 00 011222222222 2334556666777
Q ss_pred HHHHHHHHhcCCCC-eE-EeCC-----C------------C-ceeEEEEEcCCchHHHHHHHHHhccCcEE---------
Q psy3048 261 LAKKFADLVEKDDR-FE-LVCP-----P------------S-MGLVCFRLKGDNDLTNQLYERLMSHKQIY--------- 311 (367)
Q Consensus 261 la~~l~~~L~~~~g-~~-~~~~-----~------------~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~--------- 311 (367)
.++++.+.|++.+. +. +..| + . .++++|.+++.......+.+.|...+...
T Consensus 263 ~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~ 342 (393)
T 1n8p_A 263 SANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLL 342 (393)
T ss_dssp HHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEE
T ss_pred HHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCccee
Confidence 88888888888765 54 2222 1 2 56889998753234556777664322100
Q ss_pred EEE--eEE----------CC--eeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 312 IIK--ASF----------QG--RPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 312 ~~~--~~~----------~~--~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
..+ ..+ .| ++.+|+|+ ...+++++|+.+.++|+++
T Consensus 343 ~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~-g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 343 EVPAVMTHGGIPKEAREASGVFDDLVRISV-GIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp ECTTTTTSCSSCTTTTTTTSCCTTEEEEEC-CSSCHHHHHHHHHHHHHHH
T ss_pred eccccccccccCHHHHHhcCCCCCeEEEEE-ccCCHHHHHHHHHHHHHHh
Confidence 100 000 01 46899986 5788899999999998875
No 171
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.70 E-value=2.8e-16 Score=147.68 Aligned_cols=243 Identities=11% Similarity=0.025 Sum_probs=160.1
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEec-CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
.|+++..+|.++...++..|++++.++. ++...+++ +.+ .+|++++++|++|.+.|+++|.++++
T Consensus 91 ~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--------~~~------~~v~i~~p~nptG~~~~~~~l~~l~~ 156 (350)
T 3fkd_A 91 RSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF--------SNM------DFCWLCNPNNPDGRLLQRTEILRLLN 156 (350)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC--------TTC------SEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc--------CCC------CEEEEeCCCCCcCCCCCHHHHHHHHH
Confidence 5667778999999999999999999998 65445554 223 47788999999999999999999999
Q ss_pred hcC-cEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc-cCCcceeEEEecchhhhhhccCCccccccCCCCC
Q psy3048 111 EYN-IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPM 188 (367)
Q Consensus 111 ~~g-i~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 188 (367)
.++ .++++|++|+.+........... +....++++.+.+|+++ .+.++|+++. +++...........
T Consensus 157 ~~~~~~li~Dea~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~--------- 225 (350)
T 3fkd_A 157 DHPDTTFVLDQSYVSFTTEEVIRPADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTP--------- 225 (350)
T ss_dssp HCTTSEEEEECTTTTSCSSCCCCGGGG-TTCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCT---------
T ss_pred hCCCCEEEEECchhhhccCcchhhHHh-hcCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCC---------
Confidence 876 79999999976543221111111 11123578889999997 4467888887 44433322111000
Q ss_pred CCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHH
Q psy3048 189 NTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFAD 267 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~~ 267 (367)
+ . ...+...++...+.... +.+..++..++++++.+
T Consensus 226 ------~-------------------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 262 (350)
T 3fkd_A 226 ------W-------------------------------A------VNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFIT 262 (350)
T ss_dssp ------T-------------------------------C------SCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHH
T ss_pred ------C-------------------------------C------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00122222222222111 23333444488889999
Q ss_pred HhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeE-EC--CeeEEEEEecCCCCCHHHHHHHHHH
Q psy3048 268 LVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKAS-FQ--GRPFLRFVVTSPETNQCDVAFAWNE 343 (367)
Q Consensus 268 ~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~-~~--~~~~lRi~~~~~~~~~edid~li~~ 343 (367)
.|+++||+++. ++..+.+.++++.. ...++.+.|.+ +|+ .+.++. +. +..++|+++. +++|+++++++
T Consensus 263 ~L~~~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~L~~~~gi-~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~a 334 (350)
T 3fkd_A 263 ALNRLDGVEVH-PSGTTFFLLRLKKG--TAAELKKYMLEEYNM-LIRDASNFRGLDESYVRITTQ----RPAQNQLFIKA 334 (350)
T ss_dssp HHHHSTTEEEC-CCSSSEEEEEESSS--CHHHHHHHHHHTTCE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHHHH
T ss_pred HHhcCCCcEEC-CCCCcEEEEECCCC--CHHHHHHHHHHHCCE-EEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHH
Confidence 99888899875 45556667777652 46789999988 774 444432 21 2569999753 68999999999
Q ss_pred HHHHHHH
Q psy3048 344 ISHQSSE 350 (367)
Q Consensus 344 l~~~~~~ 350 (367)
|+++.++
T Consensus 335 l~~~~~~ 341 (350)
T 3fkd_A 335 LETFLEK 341 (350)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 9998664
No 172
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.70 E-value=2.9e-15 Score=144.46 Aligned_cols=263 Identities=13% Similarity=0.071 Sum_probs=154.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcc-------------eEEEecCC-----CCCcCHHHHHHHHHHHhhCCCccEEEEEec
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVP-------------VRQLRSDD-----NGVLRGDALLTAVKEDLAKGLIPCCLVATL 91 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~-------------v~~v~~~~-----~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~ 91 (367)
+.+|+.+...|.+...++...|.+ ++.++.+. ++.+|+++|++++++.. .+..+.+|+++.
T Consensus 129 ~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p 207 (426)
T 1sff_A 129 SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEP 207 (426)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECS
T ss_pred CeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEec
Confidence 345555666666666666666543 67777653 24579999999997410 001134555543
Q ss_pred CCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecc
Q psy3048 92 GTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNA 167 (367)
Q Consensus 92 ~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~ 167 (367)
..+++|.+.+ +++|.++|++||+++++|++|+++............++ ..|++ +.+|+++.+..+|+++.++
T Consensus 208 ~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~- 283 (426)
T 1sff_A 208 VQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRA- 283 (426)
T ss_dssp BCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEH-
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcH-
Confidence 3334997777 99999999999999999999985322111111111122 24665 5569998544479988864
Q ss_pred hhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh
Q psy3048 168 NHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG 247 (367)
Q Consensus 168 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 247 (367)
+.... +. . ... ...+ ....+....+.++++.+.
T Consensus 284 ~~~~~-l~--~-----~~~-----~~~~----------------------------------~~~~~~~~a~~aal~~~~ 316 (426)
T 1sff_A 284 EVMDA-VA--P-----GGL-----GGTY----------------------------------AGNPIACVAALEVLKVFE 316 (426)
T ss_dssp HHHTT-SC--T-----TSB-----CCSS----------------------------------SSCHHHHHHHHHHHHHHH
T ss_pred HHHhh-hc--c-----CCc-----CcCC----------------------------------CCCHHHHHHHHHHHHHHH
Confidence 32321 11 0 000 0000 011122234444555443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcC-------CchHHHHHHHHHhccCcEEEEEeE
Q psy3048 248 LKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKG-------DNDLTNQLYERLMSHKQIYIIKAS 316 (367)
Q Consensus 248 ~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~-------~~~~~~~l~~~L~~~g~~~~~~~~ 316 (367)
.+ ++.++..++++++.++|++ ++.+... ++..+.+.+.+.. ......++.+.|.++|+ .+.+..
T Consensus 317 ~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi-~v~~~~ 391 (426)
T 1sff_A 317 QE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGL-ILLSCG 391 (426)
T ss_dssp HT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTE-ECEEES
T ss_pred hc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCc-EEecCC
Confidence 32 3455667777777777765 4433322 2335667777742 12345678889988884 444332
Q ss_pred ECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 317 FQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 317 ~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
. ...++|+++ ...++++|+++++++|+++++++
T Consensus 392 ~-~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 392 P-YYNVLRILV-PLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp T-TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 2 246899965 45778999999999999998765
No 173
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.69 E-value=9e-16 Score=147.60 Aligned_cols=260 Identities=12% Similarity=-0.031 Sum_probs=156.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec-CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecC-CCcccccCChhhHH--
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAFDNLEELG-- 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i~dl~~I~-- 106 (367)
-.|++++.+|.++...++..|++++.++. ++++.+|+++|++++++....+ ...+++++++ +|++|.+.|.+++.
T Consensus 126 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l 204 (413)
T 3t18_A 126 DPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDS-DRIASLINSPGNNPTGYSLSDEEWDEV 204 (413)
T ss_dssp CEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcC-CCEEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 45667788999999999999999999998 4567999999999998631100 0137778888 89999997766555
Q ss_pred -HHHh------hcCcEEEEecccccccccChhhhh---hhCCCC-Cc-ceeeeccccccc-cCCcceeEEEe--cchhhh
Q psy3048 107 -PICQ------EYNIWLHVDAAYAGSALLLPEYAH---LKRGLE-YV-DSFAFNAHKWLL-TNHDCSAMWVK--NANHLT 171 (367)
Q Consensus 107 -~l~~------~~gi~l~vD~a~~~~~~~~~~~~~---~~~~~~-~~-D~~~~~~hK~l~-~p~g~g~l~~~--~~~~~~ 171 (367)
++|+ +||+++++|++|+.+.+....... ...++. +. .+++.+.+|.++ .+..+|+++.. +++...
T Consensus 205 ~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~ 284 (413)
T 3t18_A 205 ITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIE 284 (413)
T ss_dssp HHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHH
T ss_pred HHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHH
Confidence 5555 899999999999765543221111 111221 11 156678999998 44568888763 333332
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH---
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL--- 248 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 248 (367)
..... ..+..... |. . ...+...++...+..
T Consensus 285 ~~~~~-~~~~~~~~----------------------------------------~~--~---~~~~~~~a~~~~l~~~~~ 318 (413)
T 3t18_A 285 EFEAS-LAHSARCN----------------------------------------WS--N---GTHAAQNILIELERAENK 318 (413)
T ss_dssp HHHHH-HHHHHHHH----------------------------------------TS--S---CCHHHHHHHHHTTSHHHH
T ss_pred HHHHH-HHHhhhcc----------------------------------------cc--C---CChHHHHHHHHHhcChHH
Confidence 21100 00000000 00 0 011222332322221
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEE
Q psy3048 249 ----KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLR 324 (367)
Q Consensus 249 ----~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 324 (367)
+..+++.++..++.+++.+.|+++ |+++..+.....+++.+. ...++.+.|.++|+ .+.+ +..++|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gv-~v~~----g~~~iR 388 (413)
T 3t18_A 319 KIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTD----KAFDIVKDLEKENI-FTIP----SAKGIR 388 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECS----CHHHHHHHHHHTTE-ECEE----CSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCC----CHHHHHHHHHhCCE-EEec----CCCceE
Confidence 234456677788888999999887 777654433223333332 25678888888884 4443 346899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+++. .. +++++ ++.|.++++++.
T Consensus 389 is~~-~~-~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 389 VAIC-GV-GEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp ECTT-TS-CGGGH---HHHHHHHHHHHH
T ss_pred EEEe-eC-CHHHH---HHHHHHHHHHHh
Confidence 9754 22 34444 666666666554
No 174
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.69 E-value=3.3e-16 Score=152.12 Aligned_cols=266 Identities=14% Similarity=0.063 Sum_probs=153.3
Q ss_pred EEEecCCcchhHHHHH------HhCCcceEEEecCC-C----CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 32 VAYASDQSNSSVEKSA------IIGDVPVRQLRSDD-N----GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~------~~~g~~v~~v~~~~-~----~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
+|++...+|......+ ...|..++.++.+. + +.+|+++|+++++.... .+.+|++++++|++|.+.
T Consensus 147 vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~---~~~~v~i~~p~nptG~~~ 223 (444)
T 3if2_A 147 ILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG---RIGAICCSRPTNPTGNVL 223 (444)
T ss_dssp EEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT---CEEEEEEESSCTTTCCCC
T ss_pred EEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC---CceEEEeCCCCCCCCCcC
Confidence 4444466777665533 23567788888764 2 47999999998543221 135788889999999998
Q ss_pred C---hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCC
Q psy3048 101 N---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 101 d---l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
| +++|+++|++||+++|+|++|+.+.... .+..........++++.+.+|++..+.++|+++.. +..........
T Consensus 224 ~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~-~~l~~~~~~~~ 301 (444)
T 3if2_A 224 TDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVAD-AKVIEAVSAMN 301 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEEC-HHHHHHHHHHH
Confidence 8 8899999999999999999997421110 00000011123478899999985555667776653 22222110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHH-HH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQA-YL 255 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~~ 255 (367)
..+-.. +..+....+...+..... ....+ ..
T Consensus 302 ~~~~~~-----------------------------------------------~~~~~~~a~~~~l~~~~~~~~~~~~~~ 334 (444)
T 3if2_A 302 AVVNLA-----------------------------------------------PTRFGAAIATPLVANDRIKQLSDNEIK 334 (444)
T ss_dssp HHHHSS-----------------------------------------------CCCHHHHHHHHHHHTSHHHHHHHHTHH
T ss_pred HhccCC-----------------------------------------------CChHHHHHHHHHHHcCchhHHHHHHHH
Confidence 000000 000111122222222111 11111 23
Q ss_pred HHHHHHHHHHHHHhcC-CC--CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC-----------Cee
Q psy3048 256 RKHISLAKKFADLVEK-DD--RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ-----------GRP 321 (367)
Q Consensus 256 ~~~~~la~~l~~~L~~-~~--g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----------~~~ 321 (367)
++..+..+++.+.|.+ ++ ++.+..+.....+++.++.......++.+.|.++|+ .+.++... +..
T Consensus 335 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi-~v~~g~~~~~~~~~~~~~~~~~ 413 (444)
T 3if2_A 335 PFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGT-LIVPSEYFFPGVDVSDYQHAHE 413 (444)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTE-ECEEGGGSCTTCCCTTCSGGGS
T ss_pred HHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCe-EEecchhhcCCCCCcccccCCC
Confidence 3344444445444433 23 567665555556667775422235688888988884 44443221 125
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 322 FLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 322 ~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
++|+++.. +++||++++++|+++++++..
T Consensus 414 ~iRis~~~---~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 414 CIRMSIAA---DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp EEEEESSS---CHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeC---CHHHHHHHHHHHHHHHHHHHc
Confidence 89997643 899999999999999887653
No 175
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.69 E-value=9.3e-16 Score=148.19 Aligned_cols=250 Identities=14% Similarity=0.119 Sum_probs=154.1
Q ss_pred eEEEecCCcchhHHHHHHhCCcc------------eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~------------v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~ 98 (367)
.+|+.+...|.+...++...|.+ +..++.+ |+++|++++++.+ .+|+++.++++.|.
T Consensus 148 ~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~~------~~vi~~p~~~~gG~ 216 (420)
T 2pb2_A 148 KIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDHT------CAVVVEPIQGEGGV 216 (420)
T ss_dssp EEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTTE------EEEEECSEETTTTS
T ss_pred EEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccCc------eEEEEeCCcCCCCe
Confidence 45555566666666666655543 5555542 8999999987543 47777776666675
Q ss_pred ----cCChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhc
Q psy3048 99 ----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTF 174 (367)
Q Consensus 99 ----i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~ 174 (367)
.+++++|.++|++||+++++|++|+++......+.....++ ..|++++ +|+++++..+|+++.+++ ... .+
T Consensus 217 ~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~-l~~-~l 291 (420)
T 2pb2_A 217 QAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE-IAS-AF 291 (420)
T ss_dssp EECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HHT-TC
T ss_pred ecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH-HHH-hh
Confidence 37899999999999999999999965432211111111222 3487754 799997677999888643 222 11
Q ss_pred cCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHH
Q psy3048 175 FTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAY 254 (367)
Q Consensus 175 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 254 (367)
. . ... . ..+ .+..+.+..+.++|+.+.. +++
T Consensus 292 ~--~-----~~~-----~-------------------------------~t~---~~~~~~~aa~~a~L~~~~~---~~~ 322 (420)
T 2pb2_A 292 H--V-----GSH-----G-------------------------------STY---GGNPLACAVAGAAFDIINT---PEV 322 (420)
T ss_dssp C----------------C-------------------------------CEE---CCCHHHHHHHHHHHHHHSS---HHH
T ss_pred c--C-----CCc-----C-------------------------------ccc---CcCHHHHHHHHHHHHHHHh---ccH
Confidence 1 0 000 0 000 0111222344445554433 356
Q ss_pred HHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 255 LRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
.++..++.+++.+.|+++ +.+... ++..+++.+.++... ....++.+.|.++|++ +.+. +..++|+++ .
T Consensus 323 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~-v~~~---~~~~iRl~~-~ 396 (420)
T 2pb2_A 323 LQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKYKGRARDFLYAGAEAGVM-VLNA---GADVMRFAP-S 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGGTTCHHHHHHHHHHTTEE-CEES---STTEEEECC-C
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCchHHHHHHHHHHHHCCCE-EEeC---CCCEEEEEC-C
Confidence 677788888888888764 333322 233456667765311 1356888999988843 4332 356899965 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~ 351 (367)
..++++|++++++.|+++++++
T Consensus 397 ~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 397 LVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999998765
No 176
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.69 E-value=9.6e-16 Score=146.84 Aligned_cols=253 Identities=13% Similarity=0.120 Sum_probs=154.4
Q ss_pred ceEEEecCCcchhHHHHHHhCC------------cceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.+|+.+...|.....+....+ .++..++. .|+++|++++++.+ .+|+++ +++++|
T Consensus 129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~------~~v~~~-p~np~g 196 (406)
T 4adb_A 129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDST------CAVIVE-PIQGEG 196 (406)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTE------EEEEEC-SEETTT
T ss_pred cEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCCe------EEEEEe-CCcCCC
Confidence 5667777666666555555444 24444443 38999999887543 467777 788888
Q ss_pred cc-----CChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhh
Q psy3048 98 AF-----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTN 172 (367)
Q Consensus 98 ~i-----~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~ 172 (367)
.+ +++++|.++|++||+++++|++|+++......+.....++ ..|++++ +|+++++..+|+++.++ +....
T Consensus 197 ~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~-~~~~~ 272 (406)
T 4adb_A 197 GVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATE-ECARV 272 (406)
T ss_dssp TSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH-HHHHT
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcH-HHHhh
Confidence 54 5799999999999999999999975433221111111222 2477755 99999555688877743 32221
Q ss_pred hccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHH
Q psy3048 173 TFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQ 252 (367)
Q Consensus 173 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 252 (367)
+.. .. .. ..+ . ...+.+..+.++++.+.. +
T Consensus 273 -~~~---~~-~~--------~~~-------------------------------~---~~~~~~~a~~~~l~~~~~---~ 302 (406)
T 4adb_A 273 -MTV---GT-HG--------TTY-------------------------------G---GNPLASAVAGKVLELINT---P 302 (406)
T ss_dssp -CCT---TS-SC--------CSS-------------------------------T---TCHHHHHHHHHHHHHHSS---H
T ss_pred -hcc---CC-cC--------CCC-------------------------------C---CCHHHHHHHHHHHHHHHh---c
Confidence 100 00 00 000 0 011122333344443322 5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC-eEEeC--CCCceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEec
Q psy3048 253 AYLRKHISLAKKFADLVEKDDR-FELVC--PPSMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVT 328 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g-~~~~~--~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~ 328 (367)
+..++..++++++.+.|+++.. +.++. +.....+.+.++... ....++.+.|.++|+. +.+ .+..++|+++
T Consensus 303 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~---~~~~~iRi~~- 377 (406)
T 4adb_A 303 EMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVM-VLI---AGGNVVRFAP- 377 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEE-CEE---SSTTEEEECC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcE-Eee---cCCCeEEEEC-
Confidence 6667788888888888876421 11111 112345667665421 1367899999999843 333 3456999954
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 329 SPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+..++++|+++++++|+++++++..
T Consensus 378 ~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 378 ALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5677899999999999999988764
No 177
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.69 E-value=4.9e-16 Score=145.29 Aligned_cols=236 Identities=8% Similarity=-0.030 Sum_probs=159.6
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
-.|+++ .+|.++...++..|++++.++.++++.+|+++| +. +.+|++++++|++|.+.|.+++.++++
T Consensus 98 d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~------~~~v~l~~p~nptG~~~~~~~l~~l~~ 165 (335)
T 1uu1_A 98 RSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV-----GE------GDVVFIPNPNNPTGHVFEREEIERILK 165 (335)
T ss_dssp EEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC-----CT------TEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc-----CC------CCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 356777 899999999988999999999877778898887 22 357777999999999999999999999
Q ss_pred hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCC
Q psy3048 111 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMN 189 (367)
Q Consensus 111 ~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 189 (367)
..| ++++|++|+.+... +.... . +....++++.+.+|+++.| ..+|+++.+ ++...........|
T Consensus 166 ~~~-~li~De~~~~~~~~-~~~~~-~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~--------- 231 (335)
T 1uu1_A 166 TGA-FVALDEAYYEFHGE-SYVDF-L-KKYENLAVIRTFSKAFSLAAQRVGYVVAS-EKFIDAYNRVRLPF--------- 231 (335)
T ss_dssp TTC-EEEEECTTHHHHCC-CCGGG-G-GTCSSEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHSCTT---------
T ss_pred hCC-EEEEECcchhhcch-hHHHH-h-hhCCCEEEEecchhhcCCcccCeEEEEeC-HHHHHHHHHhcCCC---------
Confidence 989 99999999854321 10110 1 1112378889999998633 457898884 33332211100000
Q ss_pred CCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q psy3048 190 TQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L 269 (367)
. .+.+....+..+++. .+.+++..++..++++++.+.|
T Consensus 232 --~--------------------------------------~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L 269 (335)
T 1uu1_A 232 --N--------------------------------------VSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSAL 269 (335)
T ss_dssp --C--------------------------------------SCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C--------------------------------------cCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000111222333332 2457788888899999999999
Q ss_pred cCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 270 EKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 270 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
+++ |+++. ++..+.+.+.++. ....++.+.|.++|+ .+.+ +..++|+++. +++|+++++++|+++
T Consensus 270 ~~~-g~~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~gi-~v~~----~~~~iRis~~----~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 270 REM-GYRIT-DSRGNFVFVFMEK--EEKERLLEHLRTKNV-AVRS----FREGVRITIG----KREENDMILRELEVF 334 (335)
T ss_dssp HHH-TCCBC-CCCSSEEEEECCT--HHHHHHHHHHHHHTE-EEEE----ETTEEEEECC----CHHHHHHHHHHHHCC
T ss_pred HHC-CcEEc-CCCCeEEEEECCC--CCHHHHHHHHHHCCE-EEEE----CCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 887 77653 4455666776653 345678888888884 4444 2358999763 468899999998753
No 178
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.69 E-value=4.1e-15 Score=144.27 Aligned_cols=252 Identities=12% Similarity=0.046 Sum_probs=143.4
Q ss_pred ceEEEecCCcchhHHHHHHhCC------------cceEEEecCCCCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCcc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGT 96 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~ 96 (367)
+.+|+.+...|-+...++...| .+++.++.+ |+++|+++++ +. +.+|+++..++++
T Consensus 157 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~~------~~~vi~ep~~~~~ 225 (433)
T 1z7d_A 157 AKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDPN------VCAFIVEPIQGEA 225 (433)
T ss_dssp CEEEEETTC--------------------------CEEEECTT-----CHHHHHHHHTSTT------EEEEEECSSBSTT
T ss_pred CeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCCC------EEEEEEECCCCCC
Confidence 4455555556665555555444 345555543 8999999994 32 3466666555668
Q ss_pred cccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhh
Q psy3048 97 CAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLT 171 (367)
Q Consensus 97 G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~ 171 (367)
|.+. ++++|.++|++||+++++|++|+++......+.....++ ..|+++ ..|+++++ ..+|+++.++ +...
T Consensus 226 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~-~~~~ 301 (433)
T 1z7d_A 226 GVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAVLAND-DIML 301 (433)
T ss_dssp TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-HHHT
T ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEEEECH-HHHh
Confidence 8764 899999999999999999999975322111111111122 357764 46999865 4588888754 3222
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGL 251 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 251 (367)
. +. + ... ...| .++.+.+....++++.+..+
T Consensus 302 ~-l~--~-----~~~-----~~t~----------------------------------~~~~~~~aaa~aal~~~~~~-- 332 (433)
T 1z7d_A 302 V-IK--P-----GEH-----GSTY----------------------------------GGNPLAASICVEALNVLINE-- 332 (433)
T ss_dssp T-CC--T-----TCC-----CCTT----------------------------------TTCHHHHHHHHHHHHHHHHT--
T ss_pred h-hc--c-----ccc-----cccC----------------------------------CCCHHHHHHHHHHHHHHHhc--
Confidence 1 11 0 000 0000 01112223344455544332
Q ss_pred HHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEe
Q psy3048 252 QAYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVV 327 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~ 327 (367)
++.++..++.+++.++|+++ +.+... ++..+++.+.++.......++.+.|.++|++ +.+. +..++|+++
T Consensus 333 -~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~iRi~~ 406 (433)
T 1z7d_A 333 -KLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNELVNVLDICLKLKENGLI-TRDV---HDKTIRLTP 406 (433)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTTTCCHHHHHHHHHHTTEE-CCEE---TTTEEEECC
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccChhHHHHHHHHHHHCCeE-EecC---CCCEEEEEC
Confidence 45567778888888887653 332222 2234566777754212356888999988843 3332 346899965
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 328 TSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 328 ~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
...++++|+++++++|+++++++.
T Consensus 407 -~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 407 -PLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred -CcCCCHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999988764
No 179
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.69 E-value=3e-15 Score=143.06 Aligned_cols=250 Identities=10% Similarity=0.035 Sum_probs=147.9
Q ss_pred ceEEEecCCcchhHHHHHHhC------------CcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIG------------DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC 97 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~------------g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G 97 (367)
+.+|+.+..-|-....+.... +.++..++.+ |+++|++++++.+ .+|++..+++++|
T Consensus 125 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~------~~v~~~~~~~~~G 193 (395)
T 3nx3_A 125 GQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEKT------CAIILESVQGEGG 193 (395)
T ss_dssp CEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTTE------EEEEEESEECTTS
T ss_pred CEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCCe------EEEEEeCccCCCC
Confidence 455655655555544444332 2455666543 7999999986544 4677777778889
Q ss_pred ccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhh
Q psy3048 98 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNT 173 (367)
Q Consensus 98 ~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~ 173 (367)
.+.| +++|.++|++||+++++|++|+++......+.....++ ..|+++++ |.++++.++|+++.+++.... .
T Consensus 194 ~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~~~~~-~ 269 (395)
T 3nx3_A 194 INPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQKVASN-S 269 (395)
T ss_dssp CEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHHHHHH-H
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchhhhhh-h
Confidence 8877 99999999999999999999975432211111111222 24766654 888877788988875432122 1
Q ss_pred ccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHH
Q psy3048 174 FFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQA 253 (367)
Q Consensus 174 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 253 (367)
+. + ..... .| . ...+.+.+..++++.+.. ++
T Consensus 270 ~~--~-~~~~~---------~~-------------------------------~---~~~~~~~aa~aal~~~~~---~~ 300 (395)
T 3nx3_A 270 LE--A-GDHGS---------TY-------------------------------G---GNPLVCAGVNAVFEIFKE---EK 300 (395)
T ss_dssp SC--T-TCCSS---------CB-------------------------------S---CCHHHHHHHHHHHHHHHH---TT
T ss_pred cC--C-cccCC---------CC-------------------------------C---CCHHHHHHHHHHHHHHHh---hH
Confidence 11 0 00000 00 0 011122333344443322 23
Q ss_pred HHHHHHHHHHHHHHHhc----CCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 254 YLRKHISLAKKFADLVE----KDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~----~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
..++..++.+++++.|. +++.+... ++..+.+.+.+.. .....++.+.|.++|+. +.+. +..++|+++ .
T Consensus 301 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~l~~~Gi~-v~~~---~~~~iRi~~-~ 373 (395)
T 3nx3_A 301 ILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDK-SVKVAKVIQKCQENALL-LISC---GENDLRFLP-P 373 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECT-TSCHHHHHHHHHHTTEE-CEEE---TTTEEEECC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCC-cchHHHHHHHHHHCCCE-EecC---CCCEEEEEC-C
Confidence 34455555555555554 34544433 2234566677754 22467888999999854 3322 356999965 5
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~ 350 (367)
...+++|+++++++|++++++
T Consensus 374 ~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 374 LILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 667899999999999998764
No 180
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.68 E-value=7.5e-16 Score=147.97 Aligned_cols=243 Identities=19% Similarity=0.178 Sum_probs=157.3
Q ss_pred EEEecCCcchhHHHHHHh-----CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHH
Q psy3048 32 VAYASDQSNSSVEKSAII-----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~-----~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~ 106 (367)
.|++++..|.+....+.. .|+++++++.+ |+++|++++++.+ .+|++.+++|++|.+.|+++|+
T Consensus 107 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~------~~v~~e~~~np~G~~~~l~~i~ 175 (400)
T 3nmy_A 107 HVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRADT------KMVWIETPTNPMLKLVDIAAIA 175 (400)
T ss_dssp EEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHH
T ss_pred EEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccCC------CEEEEECCCCCCCeeecHHHHH
Confidence 566677888876665433 59999999875 8999999997655 4888899999999999999999
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC-ccee--EEEecchhhhhhccCCcccccc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH-DCSA--MWVKNANHLTNTFFTDRVYLKH 183 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~--l~~~~~~~~~~~~~~~~~yl~~ 183 (367)
++|++||+++++|++|+.+.+..+ .. .+ +|+++.+.+|++++|. ..|. ++.++++........ ..+.
T Consensus 176 ~la~~~g~~livDe~~~~~~~~~~-~~---~g---~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~-~~~~-- 245 (400)
T 3nmy_A 176 VIARKHGLLTVVDNTFASPMLQRP-LS---LG---ADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFL-QNSI-- 245 (400)
T ss_dssp HHHHHTTCEEEEECTTTHHHHCCG-GG---GT---CSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHH-HHHH--
T ss_pred HHHHHcCCEEEEECCCcccccCCh-hh---cC---CcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHH-HHhc--
Confidence 999999999999999986544322 11 13 5999999999999773 3444 444444333221100 0000
Q ss_pred CCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy3048 184 TDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAK 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~ 263 (367)
+.....+..+..++ +.+.+..++++..++++
T Consensus 246 -----------------------------------------------g~~~~~~~a~~~l~--~l~~l~~r~~~~~~~a~ 276 (400)
T 3nmy_A 246 -----------------------------------------------GGVQGPFDSFLALR--GLKTLPLRMRAHCENAL 276 (400)
T ss_dssp -----------------------------------------------CCBCCHHHHHHHHH--HHTTHHHHHHHHHHHHH
T ss_pred -----------------------------------------------CCCCCHHHHHHHHH--hHhHHHHHHHHHHHHHH
Confidence 00012234444444 34556778888999999
Q ss_pred HHHHHhcCCCCeEEe-CCC----------------CceeEEEEEcCCchHHHHHHHHHhccCc---------EEEEEeE-
Q psy3048 264 KFADLVEKDDRFELV-CPP----------------SMGLVCFRLKGDNDLTNQLYERLMSHKQ---------IYIIKAS- 316 (367)
Q Consensus 264 ~l~~~L~~~~g~~~~-~~~----------------~~~~v~f~~~~~~~~~~~l~~~L~~~g~---------~~~~~~~- 316 (367)
++.+.|+++|.+.-+ .|. ...+++|.+++.......+.+.|...+. +...|..
T Consensus 277 ~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~ 356 (400)
T 3nmy_A 277 ALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVM 356 (400)
T ss_dssp HHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTT
T ss_pred HHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCcccc
Confidence 999999999887644 331 1358889987522334566666543220 1111100
Q ss_pred -E------------CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 317 -F------------QGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 317 -~------------~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
+ -.+..+|+|+. . ||++.+++.|++.++
T Consensus 357 ~~~~~~~~~~~~~gi~~~liRlsvG-l----e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 357 THASIPVARREQLGISDALVRLSVG-I----EDLGDLRGDLERALV 397 (400)
T ss_dssp TTTTSCHHHHHHHTCCTTEEEEECC-S----SCHHHHHHHHHHHHC
T ss_pred ccccCCHHHHHhcCCCcCeEEEEeC-c----CCHHHHHHHHHHHHh
Confidence 0 02468999763 2 456666777776654
No 181
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.68 E-value=1.7e-16 Score=153.70 Aligned_cols=253 Identities=11% Similarity=0.002 Sum_probs=160.5
Q ss_pred ceEEEecCCcchhHHHHHHhCC------------cceEEEecCCC--CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTG 95 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~~--~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~ 95 (367)
.-.|++++.+|.++..+++..| .+++.++++++ ...|+ ++ .+. +.+|++++++|+
T Consensus 142 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~--~~~------~~~v~l~~p~NP 210 (432)
T 3ei9_A 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDL---ST--VGR------TDIIFFCSPNNP 210 (432)
T ss_dssp TCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCG---GG--CCC------CSEEEEESSCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCCh---hh--CCC------CCEEEEeCCCCC
Confidence 3456778899999999888776 37888888643 33443 22 111 347778899999
Q ss_pred ccccC---ChhhHHHHHhhcCcEEEEecccccccccChhhhh-hhCCCCCcceeeeccccccc-cCCcceeEEEecchhh
Q psy3048 96 TCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFAFNAHKWLL-TNHDCSAMWVKNANHL 170 (367)
Q Consensus 96 ~G~i~---dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~ 170 (367)
+|.+. ++++|+++|++||+++++|++|+.+.+....... ...+....++++.+.+|.++ .+..+|+++.++....
T Consensus 211 tG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~ 290 (432)
T 3ei9_A 211 TGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLY 290 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBC
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhh
Confidence 99985 4677777899999999999999875442111100 01112234688899999997 4466888887543210
Q ss_pred ------hhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHH
Q psy3048 171 ------TNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLR 244 (367)
Q Consensus 171 ------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (367)
...+.....+ .... ...+...+++.
T Consensus 291 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~---~~~~~~~a~~~ 321 (432)
T 3ei9_A 291 SDGFPVAKDFNRIICT----------------------------------------------CFNG---ASNISQAGALA 321 (432)
T ss_dssp TTSCBHHHHHHHHHHH----------------------------------------------SCCC---SCHHHHHHHHH
T ss_pred cchHHHHHHHHHHhcc----------------------------------------------ccCC---CCHHHHHHHHH
Confidence 0000000000 0000 01123333333
Q ss_pred Hh---hHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhcc-CcEEEEEeEE---
Q psy3048 245 SY---GLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSH-KQIYIIKASF--- 317 (367)
Q Consensus 245 ~~---~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~--- 317 (367)
.+ +.+.+++..++..++++++.+.|+++ |+++..++....+.+.+++ ....++.+.|.++ | +++.++..
T Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~g-v~v~~g~~f~~ 397 (432)
T 3ei9_A 322 CLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPN--QSSWDVFAEILEKTH-VVTTPGSGFGP 397 (432)
T ss_dssp HSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTT--SCHHHHHHHHHHHHC-EECEEGGGGCG
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCC--CCHHHHHHHHHHHCC-EEEeCchHhCC
Confidence 33 33457788888999999999999987 8887765566667777763 2356777777766 6 45544322
Q ss_pred CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 318 QGRPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 318 ~~~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
.+..++|+++ .+++++++++++.|++--.
T Consensus 398 ~~~~~iRis~---~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 398 GGEGFVRVSA---FGHRENILEACRRFKQLYK 426 (432)
T ss_dssp GGTTEEEEEC---CSCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEe---cCCHHHHHHHHHHHHHHhh
Confidence 2357999975 3489999999999987533
No 182
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.67 E-value=6.1e-15 Score=142.62 Aligned_cols=260 Identities=7% Similarity=-0.018 Sum_probs=154.0
Q ss_pred ceEEEecCCcchhHHHHHHhCC-------------cceEEEecCC-----C-CCcCHHHHHHHHHHHhhCCCccEEEEEe
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD-------------VPVRQLRSDD-----N-GVLRGDALLTAVKEDLAKGLIPCCLVAT 90 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g-------------~~v~~v~~~~-----~-~~~d~~~L~~~l~~~~~~~~~~~~vv~~ 90 (367)
+.+|+.+...|.+...++...| ..++.++.+. . +.+|+++|++++++... ...+|+++
T Consensus 135 ~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~vi~~ 211 (429)
T 1s0a_A 135 QRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH---EIAAVIIE 211 (429)
T ss_dssp CEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTT---TEEEEEEC
T ss_pred CeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCC---CEEEEEEe
Confidence 4555555566665554544322 1456666532 2 36899999999975311 12455555
Q ss_pred cC-CCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEE
Q psy3048 91 LG-TTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWV 164 (367)
Q Consensus 91 ~~-~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~ 164 (367)
.. ++++|.+.| +++|.++|++||+++|+|++|+++......+.....++ ..|+++++ |+++++ .++|+++.
T Consensus 212 p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~ 288 (429)
T 1s0a_A 212 PIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLT 288 (429)
T ss_dssp SSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEE
T ss_pred ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEe
Confidence 54 578998766 99999999999999999999975322111111111122 34777654 888877 78999887
Q ss_pred ecchhhhhhccCC-ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHH
Q psy3048 165 KNANHLTNTFFTD-RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTL 243 (367)
Q Consensus 165 ~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (367)
++ +......... ..+.... .+ ..+.+...++.+++
T Consensus 289 ~~-~~~~~l~~~~~~~~~~~~---------t~----------------------------------~~n~~~~~a~~aal 324 (429)
T 1s0a_A 289 TR-EVAETISNGEAGCFMHGP---------TF----------------------------------MGNPLACAAANASL 324 (429)
T ss_dssp CH-HHHHHHHTSTTSSCSCCC---------TT----------------------------------TTCHHHHHHHHHHH
T ss_pred CH-HHHHHhhcCCCcccccCC---------CC----------------------------------CCCHHHHHHHHHHH
Confidence 54 3332211100 0000000 00 01112223334445
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCe
Q psy3048 244 RSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGR 320 (367)
Q Consensus 244 ~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 320 (367)
+.+..+ +..++..++.+++.++|+++ +++..+. +..+++.+.++. .....++.+.|.++|+ .+.+. +
T Consensus 325 ~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~l~~~Gi-~v~~~---~- 394 (429)
T 1s0a_A 325 AILESG---DWQQQVADIEVQLREQLAPARDAEMVADVR-VLGAIGVVETTH-PVNMAALQKFFVEQGV-WIRPF---G- 394 (429)
T ss_dssp HHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEEE-EETTEEEEEESS-CBCHHHHHHHHHHTTE-ECCCB---T-
T ss_pred HHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-EeeEEEEEEECC-cccHHHHHHHHHHCCC-EEecc---C-
Confidence 443332 35567778888888888775 5664332 233456677753 1235678888888884 44331 2
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 321 PFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 321 ~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.++|+++ +..++++|+++++++|++++++
T Consensus 395 ~~iRis~-~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 395 KLIYLMP-PYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp TEEEECC-CTTCCHHHHHHHHHHHHHHTSS
T ss_pred CEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 5899965 4667899999999999988654
No 183
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.67 E-value=3e-15 Score=145.49 Aligned_cols=250 Identities=11% Similarity=-0.011 Sum_probs=154.6
Q ss_pred ceEEEecCCcchhHHHHHHhCC------------cceEEEecCCCCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCcc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGT 96 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g------------~~v~~v~~~~~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~ 96 (367)
+.+|+.+...|.+...++...| .+++.++.+ |+++|+++++ +. +.+|++...++++
T Consensus 168 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~~------~~~vi~ep~~~~~ 236 (439)
T 2oat_A 168 AKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDPN------VAAFMVEPIQGEA 236 (439)
T ss_dssp CEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTSTT------EEEEEECSSBTTT
T ss_pred CeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCCC------EEEEEEECCCCCC
Confidence 4566666666777666666655 466767653 8999999985 22 2466666555667
Q ss_pred cccC----ChhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhh
Q psy3048 97 CAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLT 171 (367)
Q Consensus 97 G~i~----dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~ 171 (367)
|.+. ++++|.++|++||+++++|++|.++......+.....++ ..|++ +..|+++++ ..+|+++.++ +...
T Consensus 237 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~-~~~~ 312 (439)
T 2oat_A 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDD-DIML 312 (439)
T ss_dssp TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECH-HHHT
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECH-HHHh
Confidence 8765 899999999999999999999965322111111111222 34766 556998865 4588888854 3222
Q ss_pred hhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHH
Q psy3048 172 NTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGL 251 (367)
Q Consensus 172 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 251 (367)
. +. + ... ...| .++.+.+....++++.+..+
T Consensus 313 ~-l~--~-----~~~-----~~t~----------------------------------~~~~~~~aaa~aal~~~~~~-- 343 (439)
T 2oat_A 313 T-IK--P-----GEH-----GSTY----------------------------------GGNPLGCRVAIAALEVLEEE-- 343 (439)
T ss_dssp T-SC--T-----TSS-----CCSS----------------------------------TTCHHHHHHHHHHHHHHHHT--
T ss_pred c-cC--C-----CCc-----ccCC----------------------------------CcCHHHHHHHHHHHHHHhhh--
Confidence 1 11 0 000 0000 01112223344455544332
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEe--CCCCceeEEEEEcCCc-hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEec
Q psy3048 252 QAYLRKHISLAKKFADLVEKDDRFELV--CPPSMGLVCFRLKGDN-DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVT 328 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~~g~~~~--~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~ 328 (367)
++.++..++.+++.+.|+++ ++.++ .++...++.+.+.... ....++.+.|.++|+ .+.+ .+..++|+++
T Consensus 344 -~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv-~v~~---~~~~~iRi~~- 416 (439)
T 2oat_A 344 -NLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGL-LAKP---THGDIIRFAP- 416 (439)
T ss_dssp -THHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTE-ECCB---SSSSEEEECC-
T ss_pred -hHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCe-EEec---CCCCEEEEEC-
Confidence 45678889999999999886 33221 1223455667765421 235688899998884 3332 2456899965
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy3048 329 SPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~~~ 350 (367)
...++++|+++++++|++++++
T Consensus 417 ~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 417 PLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHHHHHHHHh
Confidence 4577899999999999998764
No 184
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.67 E-value=2e-16 Score=151.07 Aligned_cols=254 Identities=13% Similarity=0.102 Sum_probs=156.9
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|++++.+|.++...++..|++++.++. ++++.+|+++|++++++.. ....++++++++|++|.+ +++++|
T Consensus 122 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l 198 (397)
T 3fsl_A 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ---AGSIVLLHPCCHNPTGADLTNDQWDAV 198 (397)
T ss_dssp CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC---TTCEEEECSSSCTTTCCCCCHHHHHHH
T ss_pred CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC---CCCEEEEeCCCCCCCCcCCCHHHHHHH
Confidence 35667889999999999999999999998 4578999999999997421 113588889999999999 566799
Q ss_pred HHHHhhcCcEEEEecccccccccCh----hhhhhhCCCCCcceeeecccccccc-CCcceeEEEe--cchhhhhhccCCc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP----EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVK--NANHLTNTFFTDR 178 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~----~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~--~~~~~~~~~~~~~ 178 (367)
+++|++||+++++|++|+.+.+..+ .... +.+.....++..+.+|.++. +.++|+++.. +...+.+......
T Consensus 199 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~ 277 (397)
T 3fsl_A 199 IEILKARELIPFLDIAYQGFGAGMEEDAYAIRA-IASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLK 277 (397)
T ss_dssp HHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH-HHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEEecCchhhccCcccccHHHHH-HHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHH
Confidence 9999999999999999987654311 1111 11111235777888999873 3557887753 3332322110000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH-----hhHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS-----YGLKGLQA 253 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~g~~~ 253 (367)
.+...... ....+.+..+...+.. ...+.+++
T Consensus 278 ~~~~~~~~-------------------------------------------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 314 (397)
T 3fsl_A 278 ATVRRNYS-------------------------------------------SPPNFGAQVVAAVLNDEALKASWLKEVEE 314 (397)
T ss_dssp HHHHTTTS-------------------------------------------SCCSHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHhccC-------------------------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 00000000 0000111111112221 11455777
Q ss_pred HHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEE-EEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 254 YLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCF-RLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f-~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
..++..++++++.+.|++++ |+.+..+ ..+.+.+ .+ . ...+.+.|.++| +++.++ . |+++.
T Consensus 315 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~---~--~~~~~~~l~~~g-i~v~~g----~---Ris~~- 379 (397)
T 3fsl_A 315 MRTRILAMRQELVKVLSTEMPERNFDYLLN-QRGMFSYTGL---S--AAQVDRLREEFG-VYLIAS----G---RMCVA- 379 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCTHHHH-CCSSEEECCC---C--HHHHHHHHHTTC-EECCTT----C---EEEGG-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeecC-CceEEEecCC---C--HHHHHHHHHhCC-EEECCC----C---eEEEE-
Confidence 88888999999999998864 5654433 2333322 22 1 344556666677 444322 1 88763
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy3048 330 PETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~ 347 (367)
.. +++||++++++|+++
T Consensus 380 ~~-~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 380 GL-NTANVQRVAKAFAAV 396 (397)
T ss_dssp GC-CTTTHHHHHHHHHHH
T ss_pred ec-CHhhHHHHHHHHHhh
Confidence 22 457799999999875
No 185
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.49 E-value=3.6e-18 Score=163.37 Aligned_cols=262 Identities=12% Similarity=0.035 Sum_probs=166.9
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC-C--CCCcCHHHHHHHHH-HHhhCCCccEEEEEecCCCcccccC---Ch
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD-D--NGVLRGDALLTAVK-EDLAKGLIPCCLVATLGTTGTCAFD---NL 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~-~--~~~~d~~~L~~~l~-~~~~~~~~~~~vv~~~~~t~~G~i~---dl 102 (367)
.-.|++.+.+|.++...++..|++++.++.+ + ++.+|+++|+++++ +.+ .+|++++++|++|.+. ++
T Consensus 113 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~l 186 (392)
T 3b1d_A 113 GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDV------KLYLLCNPHNPGGRVWEREVL 186 (392)
Confidence 3457778889999988888889999999884 3 35689999999997 333 3666788999999985 49
Q ss_pred hhHHHHHhhcCcEEEEecccccccccChhhhhhhCCC----CCcceeeeccccccc-cCCcceeEEEecchhhhhhccCC
Q psy3048 103 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFAFNAHKWLL-TNHDCSAMWVKNANHLTNTFFTD 177 (367)
Q Consensus 103 ~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~-~p~g~g~l~~~~~~~~~~~~~~~ 177 (367)
++|.++|++||+++++|++|+.+.+....... +..+ ...++++.+.+|+++ .+..+|+++..+++.........
T Consensus 187 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 265 (392)
T 3b1d_A 187 EQIGHLCQKHHVILVSDEIHQDLTLFGHEHVS-FNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQ 265 (392)
Confidence 99999999999999999999876543211111 0111 123577888999997 44568888875443332111000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK 257 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 257 (367)
..+ .......+....+.+++.. +.+.+++..++
T Consensus 266 ~~~----------------------------------------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 298 (392)
T 3b1d_A 266 LVN----------------------------------------------NHHEVSSLGYIATETAYRY-GKPWLVALKAV 298 (392)
Confidence 000 0000000111122223332 23456777778
Q ss_pred HHHHHHHHHHHhcC-CCCeEEeCCCCceeE-EEEEcCCchHHHHHHHHHh-ccCcEEEEEeEE--CCeeEEEEEecCCCC
Q psy3048 258 HISLAKKFADLVEK-DDRFELVCPPSMGLV-CFRLKGDNDLTNQLYERLM-SHKQIYIIKASF--QGRPFLRFVVTSPET 332 (367)
Q Consensus 258 ~~~la~~l~~~L~~-~~g~~~~~~~~~~~v-~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~~~~~lRi~~~~~~~ 332 (367)
..++.+++.+.|++ +|++.+..+ ..+.+ +++++.......++.+.|. +.|+.......+ .++.++|+++..
T Consensus 299 ~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--- 374 (392)
T 3b1d_A 299 LEENIQFAVEYFAQEAPRLKVMKP-QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA--- 374 (392)
Confidence 88899999999988 778876544 33333 3555431123457888886 567543322222 245689997643
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy3048 333 NQCDVAFAWNEISHQSS 349 (367)
Q Consensus 333 ~~edid~li~~l~~~~~ 349 (367)
++++++.++++|+++++
T Consensus 375 ~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 375 PKSLVEEICKRIVCCLP 391 (392)
Confidence 57899999999988754
No 186
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.67 E-value=2.2e-16 Score=151.37 Aligned_cols=257 Identities=11% Similarity=-0.024 Sum_probs=154.0
Q ss_pred eEEEecCCcchhHHHHHHhCCcc-eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVP-VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~-v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
-.|++.+.+|.++...++..|++ ++.++.++++.++. ++++. +. +.+|++++++|++|.+.| +++|+
T Consensus 119 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~l~~~--~~------~~~v~l~~p~nptG~~~~~~~l~~l~ 189 (400)
T 3asa_A 119 QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFP-EFPED--TH------IDILCLCSPNNPTGTVLNKDQLRAIV 189 (400)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCC-CCCTT--CC------CSEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCccc-Chhhc--cC------ccEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 35666778999999988889999 99999864322221 12221 11 347777899999999976 66789
Q ss_pred HHHhhcCcEEEEecccccccccChhhhhhhCCCC---Ccceeeecccccccc-CCcceeEEEecchh------hhhhccC
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE---YVDSFAFNAHKWLLT-NHDCSAMWVKNANH------LTNTFFT 176 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~---~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~------~~~~~~~ 176 (367)
++|++||+++++|++|+.+..... ....+..+. ..++++.+.+|+++. +..+|+++.++... +......
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~ 268 (400)
T 3asa_A 190 HYAIEHEILILFDAAYSTFISDPS-LPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWER 268 (400)
T ss_dssp HHHHHTTCEEEEECTTGGGCCCTT-SCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHcCCEEEEEchhhhhhcCCC-CCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHH
Confidence 999999999999999985433211 000011111 125778999999963 34578887754321 1111000
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLR 256 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 256 (367)
. ..........+....+..++.. ..+++..+
T Consensus 269 ------~----------------------------------------~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~ 299 (400)
T 3asa_A 269 ------F----------------------------------------LSTTFNGASIPAQEAGVAGLSI---LPQLEAIH 299 (400)
T ss_dssp ------H----------------------------------------HHHHCCCCCHHHHHHHHHHHHH---TTTCHHHH
T ss_pred ------H----------------------------------------hccCccCCChHHHHHHHHHhCc---HHHHHHHH
Confidence 0 0000000011111222223322 14667777
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEE-EcCCchHHHHHHHHHhcc-CcEEEEEeEE---CCeeEEEEEecCCC
Q psy3048 257 KHISLAKKFADLVEKDDRFELVCPPSMGLVCFR-LKGDNDLTNQLYERLMSH-KQIYIIKASF---QGRPFLRFVVTSPE 331 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~-~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~~~lRi~~~~~~ 331 (367)
+..++.+++.+.|+++ |+++..++..+.++++ ++. .....++.+.|.++ | +.+.++.. .+..++|+++ .
T Consensus 300 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g-v~v~~g~~f~~~~~~~iRis~---~ 373 (400)
T 3asa_A 300 YYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQA-NISDRDLFDFFLREYH-IAITPGIGFGRSGSGFVRFSS---L 373 (400)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCCT-TCCTTTHHHHHHHHHS-EECEEGGGGCGGGTTCEEEEC---C
T ss_pred HHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccCC-CCCHHHHHHHHHHhCC-EEEeChhHhCCCCCCEEEEEe---e
Confidence 8888999999999887 8887765555667777 543 11234677777655 6 44444321 1346899963 4
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy3048 332 TNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~ 352 (367)
++++++++++++|++++++.-
T Consensus 374 ~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 374 GKREDILAACERLQMAPALQS 394 (400)
T ss_dssp SCHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHHHHhhh
Confidence 689999999999999876543
No 187
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.67 E-value=3.7e-16 Score=150.22 Aligned_cols=258 Identities=12% Similarity=0.087 Sum_probs=160.6
Q ss_pred EEEecCCcchhHHHHHHhCCcc-eEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVP-VRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~-v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
.|+++..+|.++...++..|++ ++.++.+ +++.+|+++|++++++.. ...+++++++++|++|.+ +++++|
T Consensus 132 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l 208 (412)
T 1ajs_A 132 PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAP---EFSIFVLHACAHNPTGTDPTPEQWKQI 208 (412)
T ss_dssp CEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred eEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHH
Confidence 4666778999999999999999 9999883 568899999999997621 112577789999999998 456789
Q ss_pred HHHHhhcCcEEEEecccccccccC---h--hhhhhhCCCCCcceeeecccccccc-CCcceeEEEe--cchhhhhhccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLL---P--EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVK--NANHLTNTFFTD 177 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~---~--~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~--~~~~~~~~~~~~ 177 (367)
+++|++||+++++|++|+.+.+.. . .... +.....-++++.+.+|.++. +..+|+++.. +++.+.......
T Consensus 209 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~ 287 (412)
T 1ajs_A 209 ASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 287 (412)
T ss_dssp HHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHH
Confidence 999999999999999987654432 1 1111 11111114778899998875 2347888872 333211110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-----HHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-----LKGLQ 252 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~g~~ 252 (367)
..+.... ......+.+..+..+|+... .+.++
T Consensus 288 ~~~~~~~-------------------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 324 (412)
T 1ajs_A 288 QKIVRVT-------------------------------------------WSNPPAQGARIVARTLSDPELFHEWTGNVK 324 (412)
T ss_dssp HHHHHTT-------------------------------------------TSSCCSHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHhcc-------------------------------------------cCCCChHHHHHHHHHHcCcchhHHHHHHHH
Confidence 0000000 00001111223333343321 34678
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecC
Q psy3048 253 AYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTS 329 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 329 (367)
+..++..++.+++.+.|++++ ++++..+ ..+.+.+. +.. ...+...+.++|+ .+.+ .+|+++.
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~--~~~--~~~~~~~l~~~gv-~v~~-------~~Ris~~- 390 (412)
T 1ajs_A 325 TMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFSFT--GLN--PKQVEYLINQKHI-YLLP-------SGRINMC- 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEEEC--CCC--HHHHHHHHHTTCE-ECCT-------TSEEEGG-
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeeEEcC-CCceEEEe--CCC--HHHHHHHHHhCCE-EecC-------CcEEEee-
Confidence 888889999999999998874 3655433 33333331 111 2344444556674 4432 2699765
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy3048 330 PETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 330 ~~~~~edid~li~~l~~~~~~~ 351 (367)
..+++|+++++++|+++++++
T Consensus 391 -~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 391 -GLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp -GCCTTTHHHHHHHHHHHHHHC
T ss_pred -eCCHHHHHHHHHHHHHHHHhc
Confidence 247899999999999998764
No 188
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.66 E-value=1e-15 Score=152.40 Aligned_cols=290 Identities=7% Similarity=-0.014 Sum_probs=168.1
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC----CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh--
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD----DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE-- 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~----~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~-- 103 (367)
.-.|++++.+|.++..+++..|++++.++++ +++.+|+++|++++++.+ .+|++++++|++|.+.|.+
T Consensus 193 gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~------k~v~l~~p~NPtG~~~~~~~l 266 (533)
T 3f6t_A 193 GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSI------KALIVVNPTNPTSKEFDTNAL 266 (533)
T ss_dssp TCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTE------EEEEEESSCTTTCBCCCHHHH
T ss_pred cCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCC------eEEEEeCCCCCCccccCHHHH
Confidence 3467788899999999998999999999874 468999999999986554 4778889999999997666
Q ss_pred -hHHHHHh-hcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCcc-
Q psy3048 104 -ELGPICQ-EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRV- 179 (367)
Q Consensus 104 -~I~~l~~-~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~- 179 (367)
+|+++|+ +||+++++|++|+.+........... ...++++.+.+|.++.| ..+|+++.++...+.+....-++
T Consensus 267 ~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~---~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~ 343 (533)
T 3f6t_A 267 NAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVV---PYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKV 343 (533)
T ss_dssp HHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHS---GGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHH
T ss_pred HHHHHHHHhCCCCEEEEcCCccccccCccCHhhcC---CCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchh
Confidence 8888888 69999999999986544222221111 12368889999998733 44899888766433322211100
Q ss_pred --------ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH-HHHHHh----
Q psy3048 180 --------YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW-MTLRSY---- 246 (367)
Q Consensus 180 --------yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~---- 246 (367)
|-..... -....+ +-+... ..... ..+............+. .++..+
T Consensus 344 ~~~~~~~~~~~~~~~---p~~~~~-i~rl~~-----------~~~~~-----~~~~~~~~~~~~q~a~a~~a~~~L~~~~ 403 (533)
T 3f6t_A 344 ELRQLHKRYSSVVLD---PDKMKF-IDRLCA-----------DSRSI-----GLYHTAGLSTPQQIMEALFSMTHLLTST 403 (533)
T ss_dssp HHHHHHHHHHTTCSC---GGGCCH-HHHHHH-----------HHTTT-----TTGGGCSCCHHHHHHHHHHHHHHHTTCB
T ss_pred hHHHHHhhhhccccC---cchhhh-HHHHHH-----------HHHHH-----HHhcccCCChHHHHHHHHHHHHHHhhhc
Confidence 0000000 000000 000000 00000 00111111111111110 022222
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCcee-EEEEEcCC------c---------hHHHHHHHHHh-
Q psy3048 247 ----GLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGL-VCFRLKGD------N---------DLTNQLYERLM- 305 (367)
Q Consensus 247 ----~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~-v~f~~~~~------~---------~~~~~l~~~L~- 305 (367)
....+++..++..+..+++.+.|. + ++.+. ++..+. +.+.+... . ....++..++.
T Consensus 404 g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~ 480 (533)
T 3f6t_A 404 NGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAE 480 (533)
T ss_dssp GGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHH
Confidence 234567777788889999999997 5 55543 333333 33333210 0 01335555555
Q ss_pred ccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 306 SHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 306 ~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+.|+....+..+. +.+++|+++. ..+++|+++++++|.++++++..
T Consensus 481 ~~GV~v~pg~~f~~~~~~iRls~a--~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 481 KNGVVLVDGVGFGAKPGELRVSQA--NLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HTTSSSCTTEEECSSTTEEEEESS--SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEeCCcccCCCCCEEEEEEe--eCCHHHHHHHHHHHHHHHHHHHH
Confidence 4564332222222 3569999763 24689999999999999887653
No 189
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.66 E-value=3.5e-16 Score=148.93 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=151.0
Q ss_pred EEEecCC---cchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEE-EEEecCCCccc-ccCChhhHH
Q psy3048 32 VAYASDQ---SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCC-LVATLGTTGTC-AFDNLEELG 106 (367)
Q Consensus 32 ~v~~s~~---~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~-vv~~~~~t~~G-~i~dl~~I~ 106 (367)
.|++++. +|+++...++..|++++.+ .|+++|+++ ++. +.+ |++++++|++| ...|+++|.
T Consensus 100 ~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~~------~~~~v~~~~p~nptG~~~~~l~~i~ 165 (374)
T 2aeu_A 100 KVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-IDK------DTLVIITGSTMDLKVIELENFKKVI 165 (374)
T ss_dssp EEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CCT------TEEEEEECBCTTSCBCCHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CCC------ccEEEEEccCCCCCCCCcccHHHHH
Confidence 4555666 5666666777889999888 288999887 433 357 88889999999 889999999
Q ss_pred HHHhhcCcEEEEecccccccc-cChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCC
Q psy3048 107 PICQEYNIWLHVDAAYAGSAL-LLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTD 185 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~-~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 185 (367)
++|++||+++++|++|+.+.. ..........+ .|+++.++||++.+ +++|+++.++ +........ ......
T Consensus 166 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~l~g-~~~G~~~~~~-~~~~~l~~~-~~~~~~-- 237 (374)
T 2aeu_A 166 NTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKLMEG-PRGGLLAGKK-ELVDKIYIE-GTKFGL-- 237 (374)
T ss_dssp HHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSSSSS-CSCEEEEEEH-HHHHHHHHH-HHTTTC--
T ss_pred HHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCcccccC-cceEEEEECH-HHHHHHHHh-hccccC--
Confidence 999999999999999976531 11000010112 49999999999876 4889887754 333221100 000000
Q ss_pred CCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHH----
Q psy3048 186 APMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISL---- 261 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~l---- 261 (367)
....+.+..+..++..+..+.+++..++...+
T Consensus 238 --------------------------------------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~ 273 (374)
T 2aeu_A 238 --------------------------------------------EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSK 273 (374)
T ss_dssp --------------------------------------------BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
T ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 00001223334445544333445555555555
Q ss_pred HHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCchH----HHHHHHHHh-ccCcEEEEEeE--ECCeeEEEEEecCCC
Q psy3048 262 AKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDNDL----TNQLYERLM-SHKQIYIIKAS--FQGRPFLRFVVTSPE 331 (367)
Q Consensus 262 a~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~~----~~~l~~~L~-~~g~~~~~~~~--~~~~~~lRi~~~~~~ 331 (367)
.+.+.+.|..+ +|+.+..++. +.+.+........ ..++...+. ++|+ .+.++. ..+..++|++++...
T Consensus 274 ~~~l~~~L~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV-~v~~g~~~~~~~~~lRi~~~~~~ 351 (374)
T 2aeu_A 274 IEKLNKELKAIDDNINIVYERTPT-GFVIKRVYKDDTINIKKLIEIGFNLLKNYGI-ITITVAGMPGASKSLRIDLTSRD 351 (374)
T ss_dssp HHHHHHHHTTTCTTEEEEEEECSS-EEEEEEEESSHHHHHHHHHHHHHHHHHHHCE-ECSTTSSSCSSCCSEEEETTSGG
T ss_pred HHHHHHhhhhhhhccCcceeeCCc-eEEEEeecccccccccchHHHHHHHHHhCCE-EEecCCCCCCCCCeEEEEcCCch
Confidence 46666666665 4666544443 3333332221111 122554444 4674 333321 123458999875444
Q ss_pred CCHHHHHHHHHHHHHHHHHhhC
Q psy3048 332 TNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 332 ~~~edid~li~~l~~~~~~~~~ 353 (367)
.+++++++++++|++.++++.+
T Consensus 352 ~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 352 AERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4555699999999999988764
No 190
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.66 E-value=3.3e-16 Score=151.17 Aligned_cols=256 Identities=11% Similarity=0.041 Sum_probs=158.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I 105 (367)
-.|++++.+|.++...++..|++++.++. ++++.+|+++|++++++.. ....++++++++|+||.+ +++++|
T Consensus 144 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~i 220 (420)
T 4f4e_A 144 AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE---PGTIVVLHACCHNPTGVDLNDAQWAQV 220 (420)
T ss_dssp CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 35667788999999999999999999998 3578999999999997321 113688889999999998 457799
Q ss_pred HHHHhhcCcEEEEecccccccccCh----hhhhhhCCCCCcceeeecccccccc-CCcceeEEEe--cchhhhhhccCCc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP----EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWVK--NANHLTNTFFTDR 178 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~----~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~--~~~~~~~~~~~~~ 178 (367)
+++|++||+++++|++|+.+.+..+ .... ..+....++++.+.+|.++. +..+|+++.. +.....+......
T Consensus 221 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~ 299 (420)
T 4f4e_A 221 VEVVKARRLVPFLDIAYQGFGESIEADAAAVRL-FAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLK 299 (420)
T ss_dssp HHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHH-HHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHCCcEEEEccccccccCCcchhhHHHHH-HHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHH
Confidence 9999999999999999977655321 1111 11122236788889999973 4568887642 2332221110000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-----hHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-----GLKGLQA 253 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~g~~~ 253 (367)
....... ...+.+.+..+...+... ..+.+++
T Consensus 300 ~~~~~~~-------------------------------------------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 336 (420)
T 4f4e_A 300 RVIRTNY-------------------------------------------SNPPTHGGAIVAAVLASPELRASWVQELGE 336 (420)
T ss_dssp HHHHTTT-------------------------------------------SSCCSHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHhccc-------------------------------------------CCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 0000000 000001112222222221 1345677
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCC
Q psy3048 254 YLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSP 330 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 330 (367)
..++..++++++.+.|+++ +|+.+..+ ..+.+.+ + +.. ...+.+.+.+.| +++.+. .|+++.
T Consensus 337 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~-~-~~~--~~~~~~~l~~~g-I~v~~~-------~Ris~~-- 401 (420)
T 4f4e_A 337 MRDRIRAMRNGLVERLKAAGIERDFSFINA-QRGMFSY-S-GLT--SAQVDRLREEFG-IYAVST-------GRICVA-- 401 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-SCSSEEE-C-CCC--HHHHHHHHHHHC-EECCTT-------SEEEGG--
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeECC-CccEEEE-e-CCC--HHHHHHHHHhCC-EEecCC-------CeEEEe--
Confidence 8888889999999999886 35654433 3333333 1 111 345555566677 444321 288764
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy3048 331 ETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 331 ~~~~edid~li~~l~~~~ 348 (367)
..+++++++++++|++++
T Consensus 402 ~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 402 ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp GCCTTTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 235677999999999875
No 191
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.65 E-value=7.4e-16 Score=148.14 Aligned_cols=260 Identities=12% Similarity=0.073 Sum_probs=147.2
Q ss_pred EEEec-CCcchhHHHHHHh----C--CcceEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC--
Q psy3048 32 VAYAS-DQSNSSVEKSAII----G--DVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-- 101 (367)
Q Consensus 32 ~v~~s-~~~H~s~~~~~~~----~--g~~v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-- 101 (367)
.|+++ ..+|..+...+.. . +..+..++.+ .++.+|+++|+ +.+. +.+|++++++|++|.+-|
T Consensus 129 ~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~------~~~v~~~~p~NptG~~~~~~ 200 (417)
T 3g7q_A 129 KVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEE------TGMICVSRPTNPTGNVITDE 200 (417)
T ss_dssp EEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTT------EEEEEEESSCTTTCCCCCHH
T ss_pred eEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccC------ceEEEECCCCCCCCCccCHH
Confidence 55655 6677776555421 2 2333444432 14678999888 4333 358888999999999977
Q ss_pred -hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccc
Q psy3048 102 -LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVY 180 (367)
Q Consensus 102 -l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~y 180 (367)
+++|+++|++||+++++|++|+.+.-.. .+..........++++.+.+|++..+.++|+++.. ++...........+
T Consensus 201 ~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~ 278 (417)
T 3g7q_A 201 ELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAN-DKTITAIANMNGII 278 (417)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEeC-HHHHHHHHHhhcce
Confidence 8999999999999999999997421100 00000011123478888999965544567876663 33222211000000
Q ss_pred cccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH-HHHHH-HHHHH
Q psy3048 181 LKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL-KGLQA-YLRKH 258 (367)
Q Consensus 181 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~~~~~ 258 (367)
.. ....+....+...+..... +...+ +.++.
T Consensus 279 ----------------------------------------------~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 311 (417)
T 3g7q_A 279 ----------------------------------------------SL-APGGMGPAMMCEMIKRNDLLRLSETVIKPFY 311 (417)
T ss_dssp ----------------------------------------------CC-CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHH
T ss_pred ----------------------------------------------ee-CCCcHHHHHHHHHHcCcchHHHHHHHHHHHH
Confidence 00 0000111222222322111 11112 33444
Q ss_pred HHHHHHHHHHhcC-CC--CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeE-EC-C--------eeEEEE
Q psy3048 259 ISLAKKFADLVEK-DD--RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKAS-FQ-G--------RPFLRF 325 (367)
Q Consensus 259 ~~la~~l~~~L~~-~~--g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~-~--------~~~lRi 325 (367)
.+..+++.+.|.+ ++ ++.+..+.....+++.++.......++.+.|.++|+ .+.++. +. + ..++|+
T Consensus 312 ~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi-~v~~g~~f~~~~~~~~~~~~~~iRi 390 (417)
T 3g7q_A 312 YQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGV-LMVPGHYFFPGLDKPWPHTHQCMRM 390 (417)
T ss_dssp HHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTE-ECEEGGGGCTTBSSCCGGGGGEEEE
T ss_pred HHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCE-EEECchhhCCCCccccccCCCeEEE
Confidence 5555566666544 34 577766555556667765422336788888988884 444332 11 1 469999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 326 VVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 326 ~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
++. . +++|+++++++|+++++++.
T Consensus 391 s~~--~-~~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 391 NYV--P-EPDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp ESC--S-CHHHHHHHHHHHHHHHHHHH
T ss_pred Eec--C-CHHHHHHHHHHHHHHHHHHH
Confidence 764 2 89999999999999988764
No 192
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.64 E-value=3.6e-16 Score=150.31 Aligned_cols=252 Identities=12% Similarity=0.029 Sum_probs=157.5
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEec-C-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I~ 106 (367)
.|++++.+|.++...++..|++++.++. + +++.+|+++|++++++... ...++++++++|++|.+. ++++|+
T Consensus 126 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~~~~p~nPtG~~~~~~~l~~l~ 202 (412)
T 1yaa_A 126 LVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPE---GSIFVLHSCAHNPTGLDPTSEQWVQIV 202 (412)
T ss_dssp CEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCT---TCEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 4666778999999999999999999998 4 3688999999999976411 124666699999999985 567889
Q ss_pred HHHhhcCcEEEEecccccccccC---h--hhhhhhCCCCC---cceeeeccccccccCCc--ceeEE--E----ecch--
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLL---P--EYAHLKRGLEY---VDSFAFNAHKWLLTNHD--CSAMW--V----KNAN-- 168 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~---~--~~~~~~~~~~~---~D~~~~~~hK~l~~p~g--~g~l~--~----~~~~-- 168 (367)
++|++||+++++|++|+.+.+.. + .... +..... -++++.+.+|.++ |+| +|+++ . ++++
T Consensus 203 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~-~~GlriG~~~~~~~~~~~~~~~~ 280 (412)
T 1yaa_A 203 DAIASKNHIALFDTAYQGFATGDLDKDAYAVRL-GVEKLSTVSPVFVCQSFAKNAG-MYGERVGCFHLALTKQAQNKTIK 280 (412)
T ss_dssp HHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHH-HHHHTTTTCCEEEEEECTTTSC-CGGGCEEEEEEECCSCTTHHHHH
T ss_pred HHHHHCCCEEEEecccccccCCcccchhHHHHH-HHhcCCCCcceEEEeccCCCCC-CcCCcceEEEEEecCCCCCHHHH
Confidence 99999999999999997654321 1 1111 000111 2577888999887 445 68877 4 1333
Q ss_pred --hhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh
Q psy3048 169 --HLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY 246 (367)
Q Consensus 169 --~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 246 (367)
...... ....... .....+....+..++...
T Consensus 281 ~~l~~~l~----~~~~~~~-------------------------------------------~~~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 281 PAVTSQLA----KIIRSEV-------------------------------------------SNPPAYGAKIVAKLLETP 313 (412)
T ss_dssp HHHHHHHH----HHHHTTT-------------------------------------------SSCCHHHHHHHHHHHHSH
T ss_pred HHHHHHHH----HHHhhcc-------------------------------------------CCCChHHHHHHHHHhCCH
Confidence 221110 0000000 000001112223333322
Q ss_pred h-----HHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC
Q psy3048 247 G-----LKGLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ 318 (367)
Q Consensus 247 ~-----~~g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 318 (367)
. .+++++..++..++.+++.+.|++++ ++++.. +..+.+.+. +.+ ...+...+.+.| +.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~--~~~~~~~l~~~g-i~v~~---- 383 (412)
T 1yaa_A 314 ELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIV-NQCGMFSFT--GLT--PQMVKRLEETHA-VYLVA---- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH-HCCSSEEEC--CCC--HHHHHHHHHHHC-EECCT----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec-cCceEEEee--CCC--HHHHHHHHHhCC-EEecc----
Confidence 1 24678888888999999999998864 365543 333444331 212 344544444567 34432
Q ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 319 GRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 319 ~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
++|+++. ..+++|+++++++|+++++.
T Consensus 384 ---~~Ris~~--~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 ---SGRASIA--GLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ---TSEEEGG--GCCTTTHHHHHHHHHHHHHH
T ss_pred ---CcEEEEc--cCCHhHHHHHHHHHHHHHHh
Confidence 5799764 24799999999999998764
No 193
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.64 E-value=4.3e-14 Score=136.71 Aligned_cols=245 Identities=11% Similarity=0.034 Sum_probs=132.7
Q ss_pred ceEEEecCCC---CCcCHHHHHHHHHHHhhCCCccEEEEEecCCC-cccccCC----hhhHHHHHhhcCcEEEEeccccc
Q psy3048 53 PVRQLRSDDN---GVLRGDALLTAVKEDLAKGLIPCCLVATLGTT-GTCAFDN----LEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 53 ~v~~v~~~~~---~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t-~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
.+..++.++. +..|+++|++++++... ..+.+|+++..++ ++|.+.+ +++|.++|++||+++++|++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~ 236 (430)
T 3i4j_A 159 AWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSG 236 (430)
T ss_dssp GSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 4445554433 34577999999975310 1124566666666 7888777 99999999999999999999976
Q ss_pred ccccChhhhhhhC-CCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhc
Q psy3048 125 SALLLPEYAHLKR-GLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLG 202 (367)
Q Consensus 125 ~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 202 (367)
+......+..... ++ ..|++++ .|.+.++ ..+|+++.+ ++...........+.... .|
T Consensus 237 ~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~---------t~------- 296 (430)
T 3i4j_A 237 MGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLAA-PQVYETVMGGSGAFMHGF---------TY------- 296 (430)
T ss_dssp TTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEEC-HHHHHHHHHTTCBCCCCC---------TT-------
T ss_pred CCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEEC-HHHHHHHhccCCcccccC---------CC-------
Confidence 5332211111111 22 2466665 4998865 557888774 333322111111111000 00
Q ss_pred ccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEe
Q psy3048 203 KALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV----EKDDRFELV 278 (367)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L----~~~~g~~~~ 278 (367)
....+.+.+..++++.+..+ ++.++..++.+++++.| .+++++...
T Consensus 297 ---------------------------~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 297 ---------------------------AGHPVSVAAGLSVLDIVERE---DLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp ---------------------------TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred ---------------------------CCCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 01111223333444443232 33344444555554444 345666544
Q ss_pred CCCCceeEEEEEcCC--------chHHHHHHHHHhccCcEEEEEe-E--ECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 279 CPPSMGLVCFRLKGD--------NDLTNQLYERLMSHKQIYIIKA-S--FQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 279 ~~~~~~~v~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~-~--~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
. +..+.+.+.+.+. .....++.+.|.++|++..... . ..+..++|+++ ....+++|+++++++|+++
T Consensus 347 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~ 424 (430)
T 3i4j_A 347 R-GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGP-PLSITAAEVDGLLALLAGA 424 (430)
T ss_dssp E-EETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECC-CTTCCHHHHHHHHHHHHHH
T ss_pred E-EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHH
Confidence 3 2334555555321 0113578888998985432211 1 11356899965 4566899999999999999
Q ss_pred HHHh
Q psy3048 348 SSEM 351 (367)
Q Consensus 348 ~~~~ 351 (367)
++++
T Consensus 425 l~~~ 428 (430)
T 3i4j_A 425 LEDV 428 (430)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 194
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.64 E-value=2.4e-14 Score=138.15 Aligned_cols=255 Identities=9% Similarity=-0.063 Sum_probs=150.4
Q ss_pred CceEEEecCCcchhHHHHHHhCC-------------cceEEEecCCCCC----------------cCHHHHH-HHHHHHh
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGD-------------VPVRQLRSDDNGV----------------LRGDALL-TAVKEDL 78 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g-------------~~v~~v~~~~~~~----------------~d~~~L~-~~l~~~~ 78 (367)
++.+|+.+..-|.+...++...| .+++.++.+++++ +|+++|+ +++++..
T Consensus 129 ~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~ 208 (419)
T 2eo5_A 129 RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV 208 (419)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence 35566655566655555443322 3677888765443 4688999 8887420
Q ss_pred hCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccc
Q psy3048 79 AKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLL 154 (367)
Q Consensus 79 ~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~ 154 (367)
......+|+++..++++|.+.| +++|.++|++||+++++|++|+++......+.....++ ..|+++ ..|.++
T Consensus 209 -~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~ 284 (419)
T 2eo5_A 209 -PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALG 284 (419)
T ss_dssp -CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGG
T ss_pred -CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--eccccc
Confidence 0001235555544456898766 99999999999999999999985432211111111122 347665 458888
Q ss_pred cC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCcccccccccccc
Q psy3048 155 TN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRR 233 (367)
Q Consensus 155 ~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
++ .++|+++.+++- . .+ .... .. .| ..+.
T Consensus 285 ~G~~riG~~~~~~~~-~--~~--------~~~~---~~--t~----------------------------------~~n~ 314 (419)
T 2eo5_A 285 GGIMPIGATIFRKDL-D--FK--------PGMH---SN--TF----------------------------------GGNA 314 (419)
T ss_dssp TTTSCCEEEEEEGGG-C--CC-------------------CC----------------------------------CCCH
T ss_pred CCccceEEEEEchHh-h--cC--------Cccc---CC--CC----------------------------------CCCH
Confidence 76 788998885431 1 11 0000 00 00 0011
Q ss_pred ccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEE
Q psy3048 234 FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYII 313 (367)
Q Consensus 234 ~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~ 313 (367)
+...+..++++.. ++..++..++.+++.+.|+++ +..+ ++..+.+.+.+.+...... +.+.|.++|+. +.
T Consensus 315 ~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~-v~ 384 (419)
T 2eo5_A 315 LACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL--ADDV-RGIGLAWGLEYNEKKVRDR-IIGESFKRGLL-LL 384 (419)
T ss_dssp HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS--SSEE-EEETTEEEEECSCHHHHHH-HHHHHHHTTEE-CE
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh--hhhe-EeeeEEEEEEEecCccHHH-HHHHHHHCCCE-Ee
Confidence 1123333444432 226678889999999999876 2111 2334556666632112345 88888888854 43
Q ss_pred EeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 314 KASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 314 ~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+. +..++|+++ +...+++|+++++++|+++++++
T Consensus 385 ~~---~~~~lRis~-~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 385 PA---GRSAIRVIP-PLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 32 246899965 45678999999999999987753
No 195
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.64 E-value=1e-14 Score=142.40 Aligned_cols=264 Identities=16% Similarity=0.146 Sum_probs=151.9
Q ss_pred EEecCCcchhHHHH-HHhCCcceEEE------ecC----CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcc-ccc-
Q psy3048 33 AYASDQSNSSVEKS-AIIGDVPVRQL------RSD----DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGT-CAF- 99 (367)
Q Consensus 33 v~~s~~~H~s~~~~-~~~~g~~v~~v------~~~----~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~-G~i- 99 (367)
|+++ ..|+....+ ....|+.+... +.+ .++.+|+++|++++++.. ...+.+|++++++|++ |.+
T Consensus 125 Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~ 201 (467)
T 2oqx_A 125 VAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPV 201 (467)
T ss_dssp EEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCC
T ss_pred EEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccC
Confidence 5555 578664333 33455554432 222 357799999999998631 0013478888888887 665
Q ss_pred --CChhhHHHHHhhcCcEEEEeccccc-ccc--------cCh-hhhhhh-CCCCCcceeeeccccccccCCcceeEEEec
Q psy3048 100 --DNLEELGPICQEYNIWLHVDAAYAG-SAL--------LLP-EYAHLK-RGLEYVDSFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 100 --~dl~~I~~l~~~~gi~l~vD~a~~~-~~~--------~~~-~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
+++++|+++|++||+++|+|++|+. +.+ ..+ ...... ...+.+|++++++||+++.|.| |+++.++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~ 280 (467)
T 2oqx_A 202 SLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKD 280 (467)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECS
T ss_pred CHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecC
Confidence 4688999999999999999988865 221 000 011100 0012358889999999987744 5555544
Q ss_pred c---hhhhhhccCCcccc--ccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHH
Q psy3048 167 A---NHLTNTFFTDRVYL--KHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWM 241 (367)
Q Consensus 167 ~---~~~~~~~~~~~~yl--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
. +.+.+. ..+. ..+.. .+ .. ..+..+ +
T Consensus 281 ~~~~~~~~~~----~~~~~~~~~~~-------~~-------------------------------~~-----~~~~~~-~ 312 (467)
T 2oqx_A 281 DSFFDVYTEC----RTLCVVQEGFP-------TY-------------------------------GG-----LEGGAM-E 312 (467)
T ss_dssp GGGHHHHHHH----HHHHHHTTSSC-------CC-------------------------------CC-----CCHHHH-H
T ss_pred hhHHHHHHHH----HHhhhccCCcc-------cc-------------------------------cc-----hhhhHH-H
Confidence 4 222211 0111 00000 00 00 001111 1
Q ss_pred HHHHhhHHHH-HHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEc----CC--chH-HHHHHHHH-hccCcEEE
Q psy3048 242 TLRSYGLKGL-QAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLK----GD--NDL-TNQLYERL-MSHKQIYI 312 (367)
Q Consensus 242 ~l~~~~~~g~-~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~----~~--~~~-~~~l~~~L-~~~g~~~~ 312 (367)
++.....+.+ ++.+++..++++++.+.|+++ |+++. +.....+.+.+. +. ... ..++.+.| .++|+ .+
T Consensus 313 al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv-~~ 389 (467)
T 2oqx_A 313 RLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGI-RA 389 (467)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCE-EC
T ss_pred HHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCc-ee
Confidence 2211101111 234455677888999999887 77777 555566777763 11 112 45668888 77774 44
Q ss_pred EE-eEE-----C--------CeeEEEEEecCCC-CCHHHHHHHHHHHHHHHHHhh
Q psy3048 313 IK-ASF-----Q--------GRPFLRFVVTSPE-TNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 313 ~~-~~~-----~--------~~~~lRi~~~~~~-~~~edid~li~~l~~~~~~~~ 352 (367)
.+ +.+ . +..++|+++ ... ++++||++++++|++++++..
T Consensus 390 ~~~~~~~~~~~~~~g~~~~~~~~~iRl~~-~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 390 VEIGSFLLGRDPKTGKQLPCPAELLRLTI-PRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp EEESHHHHCBCTTTCSBCCCSCCEEEECC-CTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccccccccccccccCccCeEEEEe-cCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 33 210 0 136899965 455 889999999999999988754
No 196
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.63 E-value=2e-15 Score=145.10 Aligned_cols=255 Identities=16% Similarity=0.095 Sum_probs=154.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I 105 (367)
-.|++++.+|.++...++..|++++.++. ++++.+|+++|++++++..+ ...++++++++|+||.+.+ +++|
T Consensus 132 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~i~~~~p~NPtG~~~~~~~l~~i 208 (409)
T 4eu1_A 132 NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPE---GSVILVHACAHNPTGVDPTHDDWRQV 208 (409)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCC---CcEEEEECCCCCCCCCCCCHHHHHHH
Confidence 46777889999999999999999999987 35689999999999975321 1357777899999999966 5559
Q ss_pred HHHHhhcCcEEEEecccccccccCh-----hhhhhhCCCCCcceeeeccccccccC-CcceeE--EEecchhhhhhccCC
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLLP-----EYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAM--WVKNANHLTNTFFTD 177 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l--~~~~~~~~~~~~~~~ 177 (367)
+++|++||+++++|++|+.+.+... .... +.+...-.+++.+.+|.++.| ..+|++ ++.+++........-
T Consensus 209 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~ 287 (409)
T 4eu1_A 209 CDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRH-LVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQL 287 (409)
T ss_dssp HHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH-HHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHhCCcEEEEeccccccccCCcccchHHHHH-HHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999987654321 1111 111111135666788998743 557886 555544211110000
Q ss_pred ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh-----HHHHH
Q psy3048 178 RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG-----LKGLQ 252 (367)
Q Consensus 178 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~g~~ 252 (367)
..+... .......+.+..+..++.... .+.++
T Consensus 288 ~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (409)
T 4eu1_A 288 ALLIRP-------------------------------------------MYNNPPLYGAWVVSSILKDPQLTALWKKELK 324 (409)
T ss_dssp HHHHHH-------------------------------------------HHSSCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHhh-------------------------------------------hcCCCChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 000000 000000011122222232211 33467
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC---eEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEEEEEeEECCeeEEEEEec
Q psy3048 253 AYLRKHISLAKKFADLVEKDDR---FELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIYIIKASFQGRPFLRFVVT 328 (367)
Q Consensus 253 ~~~~~~~~la~~l~~~L~~~~g---~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~lRi~~~ 328 (367)
+..++..++.+++.+.|++++. +++.. +..+.+.+ . +. +.++..++.+ .| +++.++ .|+++.
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~-~-~~---~~~~~~~ll~~~g-v~v~p~-------~Ri~~~ 390 (409)
T 4eu1_A 325 QMSSRIAEVRKRLVSELKACGSVHDWSHIE-RQVGMMAY-T-GL---TREQVELLRSEYH-IYMTLN-------GRAAVS 390 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSCCHHHH-HSCSSEEE-C-CC---CHHHHHHHHHHHC-EECCTT-------CEEEGG
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceec-CCceEEEE-e-CC---CHHHHHHHHHcCC-EEEcCC-------CEEEEE
Confidence 7788888999999999988621 44433 33444443 2 21 2345556654 46 444321 377653
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q psy3048 329 SPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~ 348 (367)
.. +++|+++++++|++++
T Consensus 391 -~~-~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 391 -GL-NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -GC-CTTTHHHHHHHHHHHH
T ss_pred -ec-CHhhHHHHHHHHHHHh
Confidence 33 4677999999998875
No 197
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.63 E-value=6.8e-16 Score=147.35 Aligned_cols=254 Identities=13% Similarity=0.027 Sum_probs=155.4
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---hhhHH
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---LEELG 106 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l~~I~ 106 (367)
.|+++..+|.++...++..|++++.++.+ +++.+|+++|++++++... ...++++++++|++|.+.| +++|+
T Consensus 119 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~~~~~~nptG~~~~~~~l~~i~ 195 (394)
T 2ay1_A 119 RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKK---GDMVLLHGCCHNPTGANLTLDQWAEIA 195 (394)
T ss_dssp CEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCT---TCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 46667789999999999899999999985 5688999999999975311 1257778999999999864 66889
Q ss_pred HHHhhcCcEEEEecccccccccC--h--hhhhhhCCCCCcceeeecccccccc-CCcceeEEE--ecchhhhhhccCCcc
Q psy3048 107 PICQEYNIWLHVDAAYAGSALLL--P--EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWV--KNANHLTNTFFTDRV 179 (367)
Q Consensus 107 ~l~~~~gi~l~vD~a~~~~~~~~--~--~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~--~~~~~~~~~~~~~~~ 179 (367)
++|++||+++++|++|+.+.+.. + .... +.....-.+++.+.+|+++. +..+|+++. .+++.+......-..
T Consensus 196 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~ 274 (394)
T 2ay1_A 196 SILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAF 274 (394)
T ss_dssp HHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEecCccccccCcccchHHHHH-HhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHH
Confidence 99999999999999998754421 1 1110 11111113667788999873 344688887 233322111000000
Q ss_pred ccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-----hHHHHHHH
Q psy3048 180 YLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-----GLKGLQAY 254 (367)
Q Consensus 180 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~g~~~~ 254 (367)
..... + .....+.+..+..+++.. ..+.+++.
T Consensus 275 ~~~~~----------~---------------------------------~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~ 311 (394)
T 2ay1_A 275 LNRQT----------Y---------------------------------SFPPFHGAKIVSTVLTTPELRADWMAELEAV 311 (394)
T ss_dssp HHHTT----------T---------------------------------SSCCCHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred HHhhh----------c---------------------------------CCCChHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 00000 0 000001112222233221 13467778
Q ss_pred HHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCC
Q psy3048 255 LRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPE 331 (367)
Q Consensus 255 ~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~ 331 (367)
.++..++.+++.+.|++++ ++++..+.....+.+.+ . ...+.+.+.++|+ .+.+ .+|+++. .
T Consensus 312 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~---~--~~~~~~~l~~~gi-~v~~-------~~Ris~~--~ 376 (394)
T 2ay1_A 312 RSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA---T--PEQVKRIKEEFGI-YMVG-------DSRINIA--G 376 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC---C--HHHHHHHHHHHCE-ECCT-------TCEEEGG--G
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC---C--HHHHHHHHHhCCE-EecC-------CCeEEee--c
Confidence 8888889999999888763 35544332223333322 1 2355556666774 3322 2699764 4
Q ss_pred CCHHHHHHHHHHHHHH
Q psy3048 332 TNQCDVAFAWNEISHQ 347 (367)
Q Consensus 332 ~~~edid~li~~l~~~ 347 (367)
++++|+++++++|+++
T Consensus 377 ~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 377 LNDNTIPILARAIIEV 392 (394)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHc
Confidence 6899999999999876
No 198
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.63 E-value=2.9e-14 Score=138.70 Aligned_cols=269 Identities=11% Similarity=0.031 Sum_probs=154.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCc------------ceEEEecCCCC-----CcC--------HHHHHHHHHHHhhCCCcc
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDV------------PVRQLRSDDNG-----VLR--------GDALLTAVKEDLAKGLIP 84 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~------------~v~~v~~~~~~-----~~d--------~~~L~~~l~~~~~~~~~~ 84 (367)
+.+|+.+...|.+...++...|. .++.++.+..+ .+| +++|++++++... ..+
T Consensus 143 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~--~~~ 220 (449)
T 3a8u_X 143 TKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDA--SNI 220 (449)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCG--GGE
T ss_pred CEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCC--CCE
Confidence 45666677777666656555442 35556543222 246 9999999975310 012
Q ss_pred EEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-Ccc
Q psy3048 85 CCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDC 159 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~ 159 (367)
.+|+++..++++|.+.| +++|.++|++||+++++|++|+++......+.....++ ..|++++ .|++++. ..+
T Consensus 221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~ 297 (449)
T 3a8u_X 221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPM 297 (449)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCC
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCce
Confidence 45666655567898888 99999999999999999999964332211111111122 2476644 5998753 348
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|+++.++ +..........+ .... .+ . ...+. .+..+.+.++
T Consensus 298 G~~~~~~-~~~~~l~~~~~~---~~~~-------~~--------------------~-------~~~t~-~~~~~~~aa~ 338 (449)
T 3a8u_X 298 GAVIAST-EIYQTFMNQPTP---EYAV-------EF--------------------P-------HGYTY-SAHPVACAAG 338 (449)
T ss_dssp EEEEEEH-HHHHHHHTCSSC---TTSC-------SS--------------------C-------CCCTT-TTCHHHHHHH
T ss_pred EEEEECH-HHHHHhhccCcc---cccc-------cc--------------------c-------ccCCC-cccHHHHHHH
Confidence 8888754 333221110000 0000 00 0 00000 0111222333
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe--CCCCceeEEEEEcCCc--h--HHHHHHHHHhccCcEEEE
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELV--CPPSMGLVCFRLKGDN--D--LTNQLYERLMSHKQIYII 313 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~--~~~~~~~v~f~~~~~~--~--~~~~l~~~L~~~g~~~~~ 313 (367)
.++++.+..+ ++.++..++.++++++|++++++.++ .++..+++.+.++... . ...++.+.|.++|+ .+.
T Consensus 339 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv-~v~ 414 (449)
T 3a8u_X 339 LAALCLLQKE---NLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGF-YVR 414 (449)
T ss_dssp HHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTE-ECE
T ss_pred HHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCc-EEe
Confidence 4445544332 45667788888888888775322211 1233456777775421 1 23368888888884 444
Q ss_pred EeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 314 KASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 314 ~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+. + .++|+++ ...++++|+++++++|+++++++
T Consensus 415 ~~---g-~~iRis~-~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 415 FG---G-DTLQFGP-TFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cC---C-CEEEEEC-CCcCCHHHHHHHHHHHHHHHHHH
Confidence 33 3 6899965 45778999999999999998764
No 199
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.62 E-value=7.1e-14 Score=135.51 Aligned_cols=263 Identities=12% Similarity=-0.049 Sum_probs=150.0
Q ss_pred ceEEEecCCcchhHHHHHHhCCcce--------------EEEecCCCCCc-----CHHHHHHHHHHHhhCCCccEEEEEe
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPV--------------RQLRSDDNGVL-----RGDALLTAVKEDLAKGLIPCCLVAT 90 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v--------------~~v~~~~~~~~-----d~~~L~~~l~~~~~~~~~~~~vv~~ 90 (367)
+.+|+.+...|.+...++...|... ..++.+.++.. |+++|++++++. ....+.+|++.
T Consensus 131 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~ 208 (439)
T 3dxv_A 131 SGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIE 208 (439)
T ss_dssp CEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEEC
T ss_pred CEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc--CCCCEEEEEEc
Confidence 4566666666776666655544322 33343322222 789999999511 11224577777
Q ss_pred cCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEec
Q psy3048 91 LGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKN 166 (367)
Q Consensus 91 ~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~ 166 (367)
.+++++|.+.| +++|.++|++||+++++|++|+++............++ ..|++ +..|.++++..+|+++.+.
T Consensus 209 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~--s~sK~~~~G~riG~~~~~~ 285 (439)
T 3dxv_A 209 PIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDIL--VLGKGLGGGLPLSAVIAPA 285 (439)
T ss_dssp SSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEE--EECGGGGTTSCCEEEEEEH
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEE--EEcchhcCCcceEEEEECH
Confidence 77888899988 99999999999999999999975322111111111222 24666 4569998666688887743
Q ss_pred chhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh
Q psy3048 167 ANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY 246 (367)
Q Consensus 167 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 246 (367)
..... +. .... ..+. +..+...+..++++.+
T Consensus 286 -~~~~~-~~-------~~~~--------------------------------------~~t~--~~~~~~~aa~aal~~~ 316 (439)
T 3dxv_A 286 -EILDC-AS-------AFAM--------------------------------------QTLH--GNPISAAAGLAVLETI 316 (439)
T ss_dssp -HHHTS-CS-------SSSC--------------------------------------CTTT--TCHHHHHHHHHHHHHH
T ss_pred -HHHhh-hc-------CCCc--------------------------------------CCCc--ccHHHHHHHHHHHHHH
Confidence 22221 10 0000 0000 0111122233334433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEc-------CCchHHHHHHHHHhccCcEEEEEe
Q psy3048 247 GLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLK-------GDNDLTNQLYERLMSHKQIYIIKA 315 (367)
Q Consensus 247 ~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~-------~~~~~~~~l~~~L~~~g~~~~~~~ 315 (367)
.. ++..++..++.+++++.|++ ++.+.... +..+.+.+.+. +......++.+.|.++|.+ +.+.
T Consensus 317 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~ 391 (439)
T 3dxv_A 317 DR---DDLPAMAERKGRLLRDGLSELAKRHPLIGDIR-GRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLV-VYYV 391 (439)
T ss_dssp HH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEE-CEEE
T ss_pred Hh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-EEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcE-Eeec
Confidence 22 33445566666666666654 44444332 23344555542 1133456888889989854 4333
Q ss_pred EECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 316 SFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 316 ~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
. ....++|+++ +...+++|+++++++|+++++++.+
T Consensus 392 ~-~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 392 G-MNGNVLEFTP-PLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp S-TTSCEEEECC-CTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred C-CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 2 2236899965 4566899999999999999987754
No 200
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.62 E-value=5e-15 Score=142.40 Aligned_cols=212 Identities=8% Similarity=-0.052 Sum_probs=141.5
Q ss_pred EEEecC-CcchhHHHHH----------HhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEec----CCCcc
Q psy3048 32 VAYASD-QSNSSVEKSA----------IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATL----GTTGT 96 (367)
Q Consensus 32 ~v~~s~-~~H~s~~~~~----------~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~----~~t~~ 96 (367)
.|++++ ..|......+ +..|++++.++.++++.+|+++|++++++.+ .+|++++ ++|++
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~t------klV~i~~s~g~p~npt 176 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKT------KMIGIQRSRGYADRPS 176 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTE------EEEEEECSCTTSSSCC
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCC------eEEEEECCCCCCCCCc
Confidence 455555 7777776433 4568999999998889999999999997655 4888888 99999
Q ss_pred cccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCC--cceeEEEecchhhhh
Q psy3048 97 CAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNH--DCSAMWVKNANHLTN 172 (367)
Q Consensus 97 G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~~~~~~~~~~ 172 (367)
|.+.|+++|+++||+ ||+++++|++|+.+.+...... . .+|+++.++||+++++. ..|+++. +++.+++
T Consensus 177 g~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~---~---g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~ 249 (409)
T 3jzl_A 177 FTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPE---V---GADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDL 249 (409)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGG---G---TCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHH
T ss_pred CccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccc---c---CCeEEEECccccCCccCCceEEEEEe-CHHHHHH
Confidence 999999999999999 9999999999987653222111 1 35999999999998753 2366555 4444433
Q ss_pred hccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHH
Q psy3048 173 TFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGL 251 (367)
Q Consensus 173 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 251 (367)
.... ..+++.... +.... ..++.++ +..-.
T Consensus 250 l~~~~~~~~~g~~~---------------------------------------------g~~~~--~~~~~l~--gl~~~ 280 (409)
T 3jzl_A 250 CGYRLTTPGIGREA---------------------------------------------GASLY--SLLEMYQ--GFFLA 280 (409)
T ss_dssp HHHHHSCTTTGGGC---------------------------------------------CCCTT--CHHHHHH--HHHHH
T ss_pred HHHHhccccccccc---------------------------------------------cccHH--HHHHHHH--HHhhH
Confidence 2110 111110000 00000 0122222 22334
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCce-----eEEEEEcCCchHHHHHHHHHhccC
Q psy3048 252 QAYLRKHISLAKKFADLVEKDDRFELVCPPSMG-----LVCFRLKGDNDLTNQLYERLMSHK 308 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~-----~v~f~~~~~~~~~~~l~~~L~~~g 308 (367)
..++++..+++.++.+.|+++ |+++... ... ++.|.+.+ .+...++++.|....
T Consensus 281 ~~r~~~~~~~a~~la~~L~~~-g~~v~p~-~~~~~~~~i~~i~l~~-~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 281 PHVTAQAIKGARFTAAMLAEF-GVEADPV-WDAPRTDLIQSVSFHN-KEKMVAFAQAIQAAS 339 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSCCEEECSC-HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCCCccEEEEEEeCC-HHHHHHHHHHHHhcC
Confidence 667788899999999999998 6787432 222 67787764 555667888887654
No 201
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.61 E-value=8.5e-14 Score=136.49 Aligned_cols=284 Identities=13% Similarity=0.065 Sum_probs=160.3
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc-----------ceEEEecCCCCC----cC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV-----------PVRQLRSDDNGV----LR 66 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~-----------~v~~v~~~~~~~----~d 66 (367)
.||+++|++.... + .+ .++.+|.....-|-....+....|. .+..++....++ .|
T Consensus 131 ~aik~a~~~~~~~-g--~~-------~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~ 200 (472)
T 3hmu_A 131 TNIRMVRTYWQNK-G--QP-------EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMD 200 (472)
T ss_dssp HHHHHHHHHHHHT-T--CT-------TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCC
T ss_pred HHHHHHHHHHHhc-C--CC-------CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccC
Confidence 4677777765422 1 01 1244555566666655555444332 345555322111 34
Q ss_pred --------HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhh
Q psy3048 67 --------GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAH 134 (367)
Q Consensus 67 --------~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~ 134 (367)
+++|++++++... ..+.+|++...+++.|.+.| +++|.++|++||+++++|++|.++......+..
T Consensus 201 ~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~ 278 (472)
T 3hmu_A 201 PEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGT 278 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchh
Confidence 7889988874311 11356666666777788877 999999999999999999999865332211111
Q ss_pred hhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhcc
Q psy3048 135 LKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLN 213 (367)
Q Consensus 135 ~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (367)
...++ ..|+++++ |.+.++ ..+|+++.+. +... .+.. ..+. ... .|
T Consensus 279 ~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~-~i~~-~~~~-~~~~-~~~--------t~------------------ 325 (472)
T 3hmu_A 279 QTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCD-EVAH-VIGK-DEFN-HGY--------TY------------------ 325 (472)
T ss_dssp HHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEH-HHHH-HHTT-SCBC-CCC--------TT------------------
T ss_pred HHhCC-CCceeeec--hhhhcCCcceEEEEECH-HHHH-hccc-CCcc-ccC--------CC------------------
Confidence 11233 34887765 988776 4778888743 3222 2210 0000 000 00
Q ss_pred CCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHhcC---CCCeEEeCCCCceeEEEE
Q psy3048 214 CSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHI-SLAKKFADLVEK---DDRFELVCPPSMGLVCFR 289 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~-~la~~l~~~L~~---~~g~~~~~~~~~~~v~f~ 289 (367)
.+..+.+.+..++|+.+..+ ++.++.. ++.+++++.|++ ++.+..+. +...++.+.
T Consensus 326 ----------------~~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-~~G~~~~i~ 385 (472)
T 3hmu_A 326 ----------------SGHPVAAAVALENLRILEEE---NILDHVRNVAAPYLKEKWEALTDHPLVGEAK-IVGMMASIA 385 (472)
T ss_dssp ----------------TTCHHHHHHHHHHHHHHHHT---THHHHHHHTHHHHHHHHHHGGGGSTTEEEEE-EETTEEEEE
T ss_pred ----------------CCCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCceEEEE
Confidence 01112223334445444333 3445555 666666666654 34444332 233455566
Q ss_pred EcCC-----------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCCC
Q psy3048 290 LKGD-----------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPRG 356 (367)
Q Consensus 290 ~~~~-----------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~~ 356 (367)
+... .....++.+.|.++|.+.. +. + .++|+++ ....+++|+++++++|+++++++.....
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~---g-~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 457 (472)
T 3hmu_A 386 LTPNKASRAKFASEPGTIGYICRERCFANNLIMR-HV---G-DRMIISP-PLVITPAEIDEMFVRIRKSLDEAQAEIE 457 (472)
T ss_dssp ECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCE-EE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCccccccccchhHHHHHHHHHHHHHCCcEEE-ec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 1225678888999996433 22 3 6999964 4567899999999999998887654433
No 202
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.61 E-value=7.2e-15 Score=143.18 Aligned_cols=260 Identities=13% Similarity=0.059 Sum_probs=156.5
Q ss_pred eEEEecCCcchhHHHHHH----hCCcceEEEec-CC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC--
Q psy3048 31 LVAYASDQSNSSVEKSAI----IGDVPVRQLRS-DD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN-- 101 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~----~~g~~v~~v~~-~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d-- 101 (367)
-.|++++.+|.++...++ ..|++++.++. ++ ++.+|+++|++++++... ..+++++++++|+||.+-+
T Consensus 146 d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~---~~~~v~~~~p~NPtG~~~~~~ 222 (448)
T 3meb_A 146 AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPE---KSIFLFHACAHNPSGIDFTEA 222 (448)
T ss_dssp CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHH
T ss_pred CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCC---CcEEEEeCCCCCCCCcCCCHH
Confidence 357778899999999999 89999999998 55 489999999999986311 1367888999999999865
Q ss_pred -hhhHHHHHhhcCcEEEEecccccccccCh---hhhhh-hCCCCCcceeeeccccccccC-CcceeE--EE--------e
Q psy3048 102 -LEELGPICQEYNIWLHVDAAYAGSALLLP---EYAHL-KRGLEYVDSFAFNAHKWLLTN-HDCSAM--WV--------K 165 (367)
Q Consensus 102 -l~~I~~l~~~~gi~l~vD~a~~~~~~~~~---~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~g~l--~~--------~ 165 (367)
+++|+++|++||+++++|++|+.+.+... ..... +.+...-.+++.+.+|.++.| ..+|++ +. .
T Consensus 223 ~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~ 302 (448)
T 3meb_A 223 QWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEK 302 (448)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccC
Confidence 55699999999999999999887554321 01000 101111246688899998743 457887 44 3
Q ss_pred cchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH
Q psy3048 166 NANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS 245 (367)
Q Consensus 166 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (367)
++.........-....... ....+.+.+..+...+..
T Consensus 303 ~~~~~~~l~~~l~~~~~~~-------------------------------------------~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 303 NKALSAAMVSGMTLQIRKT-------------------------------------------WSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHHHHHHHHHHHHHHHHTT-------------------------------------------TSSCCHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHhcc-------------------------------------------cCCccHHHHHHHHHHhcC
Confidence 3311111100000000000 000000111122222211
Q ss_pred h-----hHHHHHHHHHHHHHHHHHHHHHhcCC--CC------eEEeCCCCceeEEEEEcCCchHHHHHHHHHhc-cCcEE
Q psy3048 246 Y-----GLKGLQAYLRKHISLAKKFADLVEKD--DR------FELVCPPSMGLVCFRLKGDNDLTNQLYERLMS-HKQIY 311 (367)
Q Consensus 246 ~-----~~~g~~~~~~~~~~la~~l~~~L~~~--~g------~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~ 311 (367)
. ..+.+++..++..++++++.+.|+++ ++ +.... |..+.+.| .+. +.++...|.+ .| ++
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~-~~~g~~~~--~~~---~~~~~~~ll~~~g-V~ 412 (448)
T 3meb_A 340 KRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHIL-TAIGMFTF--TGL---TPEHVDYLKEKWS-IY 412 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHH-HCCSSEEE--CCC---CHHHHHHHHHHHC-EE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeC-CCceEEEe--cCC---CHHHHHHHHHhCC-EE
Confidence 1 11446777788889999999999876 44 33322 23344433 121 2355666644 46 55
Q ss_pred EEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 312 IIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 312 ~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.++. .|+++. . .++++|++++++|+++++++
T Consensus 413 v~~G~------gRis~a-~-~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 413 LVKAG------GRMSMC-G-LTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp ECSGG------GEEEGG-G-CCTTTHHHHHHHHHHHHHHS
T ss_pred EeCCC------cEEEEe-c-CCHHHHHHHHHHHHHHHHhc
Confidence 54321 299763 2 24567999999999998754
No 203
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.61 E-value=1.1e-15 Score=145.96 Aligned_cols=255 Identities=15% Similarity=0.083 Sum_probs=154.8
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC---ChhhH
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD---NLEEL 105 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~---dl~~I 105 (367)
-.|++.+.+|.++...++..|++++.++.+ +++.+|+++|++++++... ...++++++++|++|.+. ++++|
T Consensus 121 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~l 197 (396)
T 2q7w_A 121 KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQA---GDVVLFHGCCHNPTGIDPTLEQWQTL 197 (396)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCT---TCEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 356677889999999999999999999984 5788999999999975311 125788899999999985 46689
Q ss_pred HHHHhhcCcEEEEecccccccccC--h--hhhhhhCCCCCcceeeecccccccc-CCcceeEEE--ecchhhhhhccCCc
Q psy3048 106 GPICQEYNIWLHVDAAYAGSALLL--P--EYAHLKRGLEYVDSFAFNAHKWLLT-NHDCSAMWV--KNANHLTNTFFTDR 178 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~a~~~~~~~~--~--~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~--~~~~~~~~~~~~~~ 178 (367)
+++|++||+++++|++|+.+.+.. + .... +......++++.+.+|.++. +..+|+++. .+++.++.....-.
T Consensus 198 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~ 276 (396)
T 2q7w_A 198 AQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMK 276 (396)
T ss_dssp HHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHH
Confidence 999999999999999998754421 1 1111 10011125778889999873 334788886 23321111100000
Q ss_pred cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh-----hHHHHHH
Q psy3048 179 VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY-----GLKGLQA 253 (367)
Q Consensus 179 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~g~~~ 253 (367)
... ... + .....+....+..++... ..+.+++
T Consensus 277 ~~~-~~~---------~---------------------------------~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~ 313 (396)
T 2q7w_A 277 AAI-RAN---------Y---------------------------------SNPPAHGASVVATILSNDALRAIWEQELTD 313 (396)
T ss_dssp HHH-HTT---------T---------------------------------SSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred HHH-hhc---------c---------------------------------CCCCcHHHHHHHHHhcChhhHHHHHHHHHH
Confidence 000 000 0 000001111222222211 1246677
Q ss_pred HHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCC
Q psy3048 254 YLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSP 330 (367)
Q Consensus 254 ~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 330 (367)
..++..++.+++.+.|++++ ++++.. |..+.+.+ +.. . ...+.+.+.++|+ .+.+ .+|+++..
T Consensus 314 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~-~~~-~--~~~~~~~l~~~gv-~v~~-------~~Ris~~~- 379 (396)
T 2q7w_A 314 MRQRIQRMRQLFVNTLQEKGANRDFSFII-KQNGMFSF-SGL-T--KEQVLRLREEFGV-YAVA-------SGRVNVAG- 379 (396)
T ss_dssp C-CHHHHHHHHHHHHHHHTTCCSCCTHHH-HCCSSEEE-CCC-C--HHHHHHHHHHHCE-ECCT-------TCEEEGGG-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceec-CCCceEEE-ecC-C--HHHHHHHHHhcCe-eecC-------CceEEEee-
Confidence 77888899999999998874 355433 33333332 111 1 2345555666774 3332 26997642
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy3048 331 ETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 331 ~~~~edid~li~~l~~~ 347 (367)
.+++|+++++++|+++
T Consensus 380 -~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 380 -MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp -CCTTTHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHhc
Confidence 3789999999999875
No 204
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.60 E-value=1.7e-14 Score=139.30 Aligned_cols=211 Identities=11% Similarity=0.056 Sum_probs=140.9
Q ss_pred EEEecC-CcchhHHH-----------HHHhCCcceEEEecCCCCCcCHHHHHHHHH--HHhhCCCccEEEEEec----CC
Q psy3048 32 VAYASD-QSNSSVEK-----------SAIIGDVPVRQLRSDDNGVLRGDALLTAVK--EDLAKGLIPCCLVATL----GT 93 (367)
Q Consensus 32 ~v~~s~-~~H~s~~~-----------~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~--~~~~~~~~~~~vv~~~----~~ 93 (367)
.|++++ ..|..... .+...|++++.++.++++.+|+++|+++++ +.+ .+|++++ ++
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~t------klV~i~~s~~~p~ 190 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESI------TLVHIQRSTGYGW 190 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTE------EEEEEECSCCSSS
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCC------EEEEEEcCCCCCC
Confidence 455555 66766553 334568999999998889999999999998 444 5788888 89
Q ss_pred CcccccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC--CcceeEEEecchh
Q psy3048 94 TGTCAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN--HDCSAMWVKNANH 169 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p--~g~g~l~~~~~~~ 169 (367)
|++|.+.|+++|+++||+ +|++++||++|+.+.+...... . .+|+++.++||+++++ +..|+++.+ ++.
T Consensus 191 nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~---~---gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~l 263 (427)
T 3i16_A 191 RRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTD---V---GADLIAGSLIKNIGGGIAPTGGYLAGT-KDC 263 (427)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGG---G---TCSEEEEETTSGGGTTTCCSCEEEEEC-HHH
T ss_pred CCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccc---c---CCeEEEecCcccCCCCCCceEEEEEEC-HHH
Confidence 999999999999999999 9999999999987653322211 1 3599999999999873 234666664 443
Q ss_pred hhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH
Q psy3048 170 LTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL 248 (367)
Q Consensus 170 ~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 248 (367)
+.+.... ..+.+.. ..+..+. ..+..++ +.
T Consensus 264 i~~l~~~~~~~~~g~---------------------------------------------~~~~~~~--~a~~~l~--gl 294 (427)
T 3i16_A 264 IEKTSYRLTVPGIGG---------------------------------------------ECGSTFG--VVRSMYQ--GL 294 (427)
T ss_dssp HHHHHHHHSCTTTGG---------------------------------------------GCCCCTT--CHHHHHH--HH
T ss_pred HHHHHHhcccCccCc---------------------------------------------cCCccHH--HHHHHHH--HH
Confidence 4332110 0000000 0000011 0122222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCce-----eEEEEEcCCchHHHHHHHHHhcc
Q psy3048 249 KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMG-----LVCFRLKGDNDLTNQLYERLMSH 307 (367)
Q Consensus 249 ~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~-----~v~f~~~~~~~~~~~l~~~L~~~ 307 (367)
.-...++++..+.+.++.+.|+++ |+++. |.... ++.|.+.+ .+...++++.|...
T Consensus 295 ~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~~i~~i~l~~-~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 295 FLAPHISMEALKGAILCSRIMELA-GFEVM-PKYDEKRSDIIQSIKFND-KDKLIEFCKGIQTG 355 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCEEEECSS-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCccEEEEEEECC-HHHHHHHHHHHhhc
Confidence 344677788999999999999998 66774 32333 77888864 45566788887754
No 205
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.59 E-value=1e-12 Score=128.34 Aligned_cols=234 Identities=12% Similarity=0.026 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
+++|++++++... ..+.+|++...+++.|.+.+ +++|.++|++||+++++|++|+++......+.....++ ..
T Consensus 207 ~~~le~~i~~~~~--~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~p 283 (460)
T 3gju_A 207 ADKLEEMILAEGP--ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KP 283 (460)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CC
T ss_pred HHHHHHHHHhcCC--CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CC
Confidence 6889998874211 11356777766777777665 99999999999999999999986533221111111233 34
Q ss_pred ceeeeccccccccC-CcceeEEEecchhhhhhccC--CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCC
Q psy3048 143 DSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFT--DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPG 219 (367)
Q Consensus 143 D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (367)
|+++++ |.+.++ ..+|+++.+++ ........ ....+... ..|
T Consensus 284 di~t~s--K~l~gG~~~lg~v~~~~~-i~~~~~~~~~~~~~~~~~--------~t~------------------------ 328 (460)
T 3gju_A 284 DLITIA--KGLTSAYAPLSGVIVADR-VWQVLVQGSDKLGSLGHG--------WTY------------------------ 328 (460)
T ss_dssp SEEEEC--GGGTTTSSCCEEEEEEHH-HHHHHHHHHHHHCSCSCC--------CTT------------------------
T ss_pred Ceeeee--hhhcCCCCCeEEEEECHH-HHHHHhcccccccccccC--------CCC------------------------
Confidence 777654 998776 47788887543 22211000 00000000 000
Q ss_pred CCccccccccccccccHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCCc----
Q psy3048 220 GGVIQHWQTPLSRRFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGDN---- 294 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~---- 294 (367)
.+..+.+.+..++|+.+..+. +++..+....+.+.+.+.+++++.+..+. +...++.+.+....
T Consensus 329 ----------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 397 (460)
T 3gju_A 329 ----------SAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR-GDGMLAAVEFVADKDDRV 397 (460)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EETTEEEEEECSBTTTTB
T ss_pred ----------CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-eeeEEEEEEEccCccccc
Confidence 011112233344455443333 33333344444555555566666554432 22344555554311
Q ss_pred ------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 295 ------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 295 ------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
....++.+.|.++|.+ +.+.. +..++|+++ ....+++|+++++++|+++++++..
T Consensus 398 ~~~~~~~~~~~~~~~l~~~Gv~-v~~~~--~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 398 FFDASQKIGPQVATALAASGVI-GRAMP--QGDILGFAP-PLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CCCGGGCHHHHHHHHHHHTTEE-CEECS--SSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHHHCCeE-EecCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1255788889999854 33322 346999964 4566899999999999999987654
No 206
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.58 E-value=1.1e-13 Score=135.15 Aligned_cols=279 Identities=9% Similarity=-0.019 Sum_probs=159.2
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCc-eEEEecCCcchhHHHHHHhCC-------------cceEEEecC--CCCCc
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSR-LVAYASDQSNSSVEKSAIIGD-------------VPVRQLRSD--DNGVL 65 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~~~~~~g-------------~~v~~v~~~--~~~~~ 65 (367)
.||+++|+++..+ + ..++ .+|..+..-|-....+....+ ..+..++.. .....
T Consensus 150 ~Alk~a~~~~~~~----g-------~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 218 (457)
T 3tfu_A 150 VAAKMALQYWRGR----G-------LPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPA 218 (457)
T ss_dssp HHHHHHHHHHHHT----T-------CTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHH
T ss_pred HHHHHHHHHHHhc----C-------CCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHH
Confidence 3677777766533 1 0223 455555555555444443311 133444432 22335
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEec-CCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATL-GTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
|+++|++++++... .+.+|++.. .++++|.+.| +++|.++|++||+++++|++|.++......+.....++
T Consensus 219 d~~~le~~l~~~~~---~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~- 294 (457)
T 3tfu_A 219 YSAAFEAQLAQHAG---ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGV- 294 (457)
T ss_dssp HHHHHHHHHHHHGG---GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-
T ss_pred HHHHHHHHHHhCCC---CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCC-
Confidence 88999999985321 134666666 6788888866 99999999999999999999976432211111111122
Q ss_pred CcceeeeccccccccC-CcceeEEEecchhhhhhccCCc-cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDR-VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGP 218 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (367)
..|++++ .|.+.++ ..+|+++.+++ .........+ .+.... .|
T Consensus 295 ~pdiit~--sK~l~gG~~~lG~v~~~~~-i~~~~~~~~~~~~~~~~---------t~----------------------- 339 (457)
T 3tfu_A 295 SPDIMCV--GKALTGGYLSLAATLCTAD-VAHTISAGAAGALMHGP---------TF----------------------- 339 (457)
T ss_dssp CCSEEEE--CGGGGTTSSCCEEEEEEHH-HHHHHHHSSSCSCCCCC---------TT-----------------------
T ss_pred CceEEEE--ChhhhCCCcceEEEEEcHH-HHHHhhccCCCceeEec---------CC-----------------------
Confidence 3477755 5888876 37888887543 2221100000 000000 00
Q ss_pred CCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCch
Q psy3048 219 GGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDND 295 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~~ 295 (367)
.++.+.+.+..++|+.+..+ ++.++..++.++++++|+++ +++..+. +...++.+.+.. ..
T Consensus 340 -----------~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-~~G~~~~i~l~~-~~ 403 (457)
T 3tfu_A 340 -----------MANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTDVR-VCGAIGVIECDR-PV 403 (457)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEEEE-ECSSCEEEEESS-CC
T ss_pred -----------CcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeeeee-cCCeEEEEEECC-cc
Confidence 01111223333444444333 44556777788888877664 4554332 233556666654 22
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
...++.++|.++|++ +.+ ...++|+++ ....+++|+++++++|+++++++.
T Consensus 404 ~~~~~~~~l~~~Gv~-v~~----~~~~lRi~p-~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 404 DLAVATPAALDRGVW-LRP----FRNLVYAMP-PYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp CHHHHHHHHHHTTEE-CCC----BTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHCCeE-EEe----cCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 357899999999843 332 125899954 455689999999999999988754
No 207
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.58 E-value=8.1e-14 Score=135.77 Aligned_cols=236 Identities=13% Similarity=0.080 Sum_probs=140.1
Q ss_pred ceEEEecCC--CC--------CcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEE
Q psy3048 53 PVRQLRSDD--NG--------VLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHV 118 (367)
Q Consensus 53 ~v~~v~~~~--~~--------~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~v 118 (367)
+++.++.++ .. ..++++|++++++.. ....+|+++..++++|.+.+ +++|.++|++||+++++
T Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 270 (449)
T 2cjg_A 194 PRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP---HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIF 270 (449)
T ss_dssp CEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST---TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC---CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 566676644 11 256777998886421 11346666666678898777 99999999999999999
Q ss_pred ecccccccccChhhhhhhCCCCCcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhh
Q psy3048 119 DAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVM 198 (367)
Q Consensus 119 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 198 (367)
|++|+++......+.....++ ..|+++++ |++ | +|+++.++ +..... .+.++..... .
T Consensus 271 DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~-~~~~~l---~~~~~~~~~~---~-------- 328 (449)
T 2cjg_A 271 DEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGR-RVDEVA---DNVFAVPSRL---N-------- 328 (449)
T ss_dssp ECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECG-GGGGST---TCTTTSTTSS---C--------
T ss_pred eccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECH-HHhhhh---hhcccCCccc---c--------
Confidence 999986433211111111122 34777654 988 4 78888754 322211 0001100000 0
Q ss_pred hhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCC
Q psy3048 199 NWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDR 274 (367)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g 274 (367)
.+-.++.+.+.+..++++.+.. +++.++..++.+++.++|++ ++.
T Consensus 329 ----------------------------~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~ 377 (449)
T 2cjg_A 329 ----------------------------STWGGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPA 377 (449)
T ss_dssp ----------------------------CSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ----------------------------cCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 0001111223344445554433 34556777888888888865 344
Q ss_pred -eEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 275 -FELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 275 -~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
+.... +..+++.+.+.. .....++.++|.++|.+ +.+. +..++|+++ +..++++|+++++++|+++++++
T Consensus 378 ~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~-v~~~---g~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 378 VVLDPR-GRGLMCAFSLPT-TADRDELIRQLWQRAVI-VLPA---GADTVRFRP-PLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TSEEEE-EETTEEEEECSS-HHHHHHHHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceeeEe-eccEEEEEEECC-hHHHHHHHHHHHHCCeE-EecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 43332 334566666653 23456889999888844 3332 346999964 56778999999999999988754
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.58 E-value=9.4e-13 Score=128.17 Aligned_cols=227 Identities=11% Similarity=0.048 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecC-CCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++|++++++.. .....+|++..+ +| +|.+.| +++|.++|++||+++++|++|.++......+.....++ .
T Consensus 201 ~~~le~~l~~~~--~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~ 276 (452)
T 3n5m_A 201 VKEVDRVMTWEL--SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-K 276 (452)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-C
T ss_pred HHHHHHHHHhcC--CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-C
Confidence 899999997211 111346666666 68 998876 99999999999999999999986433221111111233 2
Q ss_pred cceeeeccccccccC-CcceeEEEecchhhhhhccC---CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCC
Q psy3048 142 VDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFT---DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKG 217 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
.|++++ .|.+..+ .++|+++.++ +... .+.. ...++...
T Consensus 277 ~di~t~--sK~l~~G~~~ig~~~~~~-~i~~-~~~~~~~~~~~~~~~--------------------------------- 319 (452)
T 3n5m_A 277 PDIITM--AKGITSAYLPLSATAVKR-EIYE-AFKGKGEYEFFRHIN--------------------------------- 319 (452)
T ss_dssp CSEEEE--CGGGGTTSSCCEEEEEEH-HHHG-GGCSSSTTCSCCCCC---------------------------------
T ss_pred CCEEee--cccccCCCcceEEEEECH-HHHH-HHhhccCCCCccccC---------------------------------
Confidence 477765 4888776 6788888743 3222 2211 01111000
Q ss_pred CCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEeCCCCceeEEEEEcCC
Q psy3048 218 PGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV----EKDDRFELVCPPSMGLVCFRLKGD 293 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L----~~~~g~~~~~~~~~~~v~f~~~~~ 293 (367)
+ -.+..+.+.+..++++.+..+ +..++..++.+++++.| .+++.+..+.. ....+.+.+...
T Consensus 320 ---------t-~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~i~~~~~ 385 (452)
T 3n5m_A 320 ---------T-FGGNPAACALALKNLEIIENE---NLIERSAQMGSLLLEQLKEEIGEHPLVGDIRG-KGLLVGIELVND 385 (452)
T ss_dssp ---------S-STTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE-SSSCEEEEEEEE
T ss_pred ---------C-CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE-EEEEEEEEEecC
Confidence 0 001112223333444443333 33344455555555554 45555544322 223334443210
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEE---CCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASF---QGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.....++.+.|.++|.+ +.+... ....++|+++ ....+++|+++++++|++++++
T Consensus 386 ~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 386 KETKEPIDNDKIASVVNACKEKGLI-IGRNGMTTAGYNNILTLAP-PLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp TTTTEECCHHHHHHHHHHHHHTTEE-CEECTTSSTTCCCEEEECC-CTTCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCHHHHHHHHHHHHHCCcE-EeecCcccCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 11235788888989854 333211 1257999964 4567899999999999998753
No 209
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.58 E-value=7.2e-14 Score=135.16 Aligned_cols=230 Identities=12% Similarity=0.039 Sum_probs=133.6
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
+|+++|++++++.. ...+.+|+++..++++|.+.| +++|.++|++||+++++|++|+++......+.....++
T Consensus 187 ~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~- 263 (433)
T 1zod_A 187 AELDYAFDLIDRQS--SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV- 263 (433)
T ss_dssp HHHHHHHHHHHHHC--CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-
T ss_pred HHHHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-
Confidence 46999999997531 011345555544467897666 99999999999999999999985432211111111122
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
..|++++ .|+++.+.++|+++.++ +....... . .+.... .+
T Consensus 264 ~~di~s~--sK~~~~G~~ig~~~~~~-~~~~~~~~-~-~~~~~~---------t~------------------------- 304 (433)
T 1zod_A 264 TPDILTL--SKTLGAGLPLAAIVTSA-AIEERAHE-L-GYLFYT---------TH------------------------- 304 (433)
T ss_dssp CCSEEEE--CHHHHTTSSCEEEEECH-HHHHHHHH-T-TCCCCC---------TT-------------------------
T ss_pred CCCEEEe--cccccCCCCeeEEEEhH-HHHHhhcc-C-CCCCCC---------CC-------------------------
Confidence 2466544 59998777789988854 32322111 0 000000 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcCC---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKGD--- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~~--- 293 (367)
.++.+...+..++++.+..+ +..++..++.+++.++|++ ++.+... ++..+++.+.+...
T Consensus 305 ---------~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~~ 371 (433)
T 1zod_A 305 ---------VSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEIVKDRRT 371 (433)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTT
T ss_pred ---------CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccc
Confidence 01112223334455544333 3455666777777777765 3444332 23344555655421
Q ss_pred ----chHHHHHHHHHhccCcEEEEEeEEC-CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 ----NDLTNQLYERLMSHKQIYIIKASFQ-GRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 ----~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.....++.+.|.++|.+ +.+.... +..++|+++ +...+++|+++++++|+++++++
T Consensus 372 ~~~~~~~~~~~~~~l~~~Gv~-v~~~~~~~~~~~lRi~~-~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 372 KEPADGLGAKITRECMNLGLS-MNIVQLPGMGGVFRIAP-PLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp TEECTTHHHHHHHHHHHTTEE-CCEECCTTSCCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHCCCe-EeccCCCCCCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHh
Confidence 12356788889888843 4333222 236899964 45678999999999999988764
No 210
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.56 E-value=2.5e-12 Score=125.12 Aligned_cols=230 Identities=10% Similarity=0.062 Sum_probs=128.5
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCC-CcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGT-TGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~-t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
|+++|+++++.... .+.+|++.... ++.|.+.+ +++|.++|++||+++++|++|+++......+.....++
T Consensus 196 d~~~le~~l~~~~~---~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~- 271 (448)
T 3dod_A 196 CLRELAQLLEEHHE---EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV- 271 (448)
T ss_dssp HHHHHHHHHHHHGG---GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-
T ss_pred HHHHHHHHHHhCCC---CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-
Confidence 48999999973221 12456555555 77787765 99999999999999999999986433221111111233
Q ss_pred CcceeeeccccccccCC-cceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNH-DCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPG 219 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (367)
..|+++++ |.+.+++ .+|+++.++. ... .+.. .+-..... ...
T Consensus 272 ~~di~t~s--K~l~~G~~~ig~v~~~~~-~~~-~~~~--~~~~~~~~---~~~--------------------------- 315 (448)
T 3dod_A 272 QPDLMAAG--KGITGGYLPIAVTFATED-IYK-AFYD--DYENLKTF---FHG--------------------------- 315 (448)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEEEHH-HHH-TTCS--CGGGCCCC---CCC---------------------------
T ss_pred CCCEEEec--ccccCCcCceEEEEECHH-HHH-Hhhh--ccccCCcc---ccc---------------------------
Confidence 24776654 9998763 7788877532 222 1111 00000000 000
Q ss_pred CCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhc---CCCCeEEeCCCCceeEEEEEcCCch-
Q psy3048 220 GGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVE---KDDRFELVCPPSMGLVCFRLKGDND- 295 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~---~~~g~~~~~~~~~~~v~f~~~~~~~- 295 (367)
..-.+..+.+.+..++|+.+..+ ++.++.+++.+++++.|. .++.+.... +...++.+.+.....
T Consensus 316 -------~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~ 384 (448)
T 3dod_A 316 -------HSYTGNQLGCAVALENLALFESE---NIVEQVAEKSKKLHFLLQDLHALPHVGDIR-QLGFMCGAELVRSKET 384 (448)
T ss_dssp -------CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EETTEEEEEECSBTTT
T ss_pred -------CCCCcCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-eeeEEEEEEEccCccc
Confidence 00001112223334444443332 334445555555555544 444443221 223355566543111
Q ss_pred ---------HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 296 ---------LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 296 ---------~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
...++.+.|.++|.+ +.+. + .++|+++ +...+++|+++++++|+++++++.
T Consensus 385 ~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~---~-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 385 KEPYPADRRIGYKVSLKMRELGML-TRPL---G-DVIAFLP-PLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp TBCCCGGGCHHHHHHHHHHHTTEE-CCEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHCCcE-Eecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 136788889999854 3332 3 6899964 456789999999999999988764
No 211
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.56 E-value=1.8e-14 Score=137.83 Aligned_cols=131 Identities=14% Similarity=-0.002 Sum_probs=97.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecC--CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~--~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~ 104 (367)
.-.|++++.+|.++...++..|++++.++.+ +++.+|++++++.+++.. ....++++++++|+||.+ +++++
T Consensus 123 gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~ 199 (401)
T 7aat_A 123 SRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP---EKSIILLHACAHNPTGVDPRQEQWKE 199 (401)
T ss_dssp CCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC---TTCEEEEESSSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCCCCCHHHHHH
Confidence 3456677889999999999999999999974 468999999998886521 124688999999999976 56889
Q ss_pred HHHHHhhcCcEEEEecccccccccChh-----hhhhhCCCCCcceeeeccccccccC-CcceeEEE
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLLPE-----YAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWV 164 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~ 164 (367)
|+++|++||+++++|++|+.+.+.... ... +.....-.+++.+.+|.++.| ..+|+++.
T Consensus 200 i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 200 LASVVKKRNLLAYFDMAYQGFASGDINRDAWALRH-FIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp HHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred HHHHHHhCCcEEEEccccccccCCCccccHHHHHH-HHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 999999999999999999766543210 110 001112257788999998743 45788876
No 212
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.56 E-value=6.1e-14 Score=135.81 Aligned_cols=212 Identities=10% Similarity=0.024 Sum_probs=138.0
Q ss_pred EEEecC-CcchhHHHHHHh----------CCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEec----CCCcc
Q psy3048 32 VAYASD-QSNSSVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATL----GTTGT 96 (367)
Q Consensus 32 ~v~~s~-~~H~s~~~~~~~----------~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~----~~t~~ 96 (367)
.|++++ ..|.+....+.+ .|++++.++.++++.+|+++|++++++.+ .+|+++. +++++
T Consensus 109 ~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~t------k~V~i~~sp~np~~~~ 182 (431)
T 3ht4_A 109 ELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNT------KMIGIQRSKGYATRPS 182 (431)
T ss_dssp EEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTE------EEEEEECSCTTSSSCC
T ss_pred EEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCC------eEEEEECCCCCCCCCc
Confidence 455555 788888876643 68999999998889999999999997654 4777775 66677
Q ss_pred cccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeecccccccc---CCcceeEEEecchhhh
Q psy3048 97 CAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLT---NHDCSAMWVKNANHLT 171 (367)
Q Consensus 97 G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~---p~g~g~l~~~~~~~~~ 171 (367)
|.+.|+++|+++|++ +|+++++|++|+.+.+...... .+ +|+++.+++|++++ |.| |+++.+ ++.++
T Consensus 183 ~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~---~g---~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~ 254 (431)
T 3ht4_A 183 FTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCH---VG---ADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVE 254 (431)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGG---TT---CSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccc---cC---CeEEEcCccccCCCCCCCce-EEEEec-HHHHH
Confidence 778999999999999 9999999999988764332211 13 49999999999876 556 777764 33333
Q ss_pred hhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHH
Q psy3048 172 NTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKG 250 (367)
Q Consensus 172 ~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 250 (367)
..... ....+... .+..+.. .+..++ +...
T Consensus 255 ~l~~~~~~~~~g~~---------------------------------------------~~~~~~~--~~~~~~--~l~~ 285 (431)
T 3ht4_A 255 ACAYRLTSPGIGAE---------------------------------------------AGASLYS--LQEMYQ--GFFL 285 (431)
T ss_dssp HHHHHHSCTTTTTS---------------------------------------------CSCCCSC--SHHHHH--HHHH
T ss_pred HHHHHhccCCcccc---------------------------------------------cCccHHH--HHHHHh--Hhhh
Confidence 22100 00000000 0000000 011111 2233
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC---Cc-eeEEEEEcCCchHHHHHHHHHhccC
Q psy3048 251 LQAYLRKHISLAKKFADLVEKDDRFELVCPP---SM-GLVCFRLKGDNDLTNQLYERLMSHK 308 (367)
Q Consensus 251 ~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~---~~-~~v~f~~~~~~~~~~~l~~~L~~~g 308 (367)
+..++++..++++++.+.|+++ |+++...+ .. .++.+.+.. .....++++.|.+..
T Consensus 286 ~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~-~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 286 APHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDD-KDRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCC-HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCC-HHHHHHHHHHHHhcC
Confidence 4667778889999999999887 66664321 11 166777753 445567888877653
No 213
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=7.2e-14 Score=134.88 Aligned_cols=210 Identities=11% Similarity=0.032 Sum_probs=137.1
Q ss_pred EEEecC-CcchhHH-----------HHHHhCCcceEEEecCCCCCcCHHHHHHHHH--HHhhCCCccEEEEEec----CC
Q psy3048 32 VAYASD-QSNSSVE-----------KSAIIGDVPVRQLRSDDNGVLRGDALLTAVK--EDLAKGLIPCCLVATL----GT 93 (367)
Q Consensus 32 ~v~~s~-~~H~s~~-----------~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~--~~~~~~~~~~~vv~~~----~~ 93 (367)
.|++++ ..|.... ..+...|++++.++. +++.+|+++|+++++ +.+ .+|++++ ++
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~t------klV~i~~s~gyp~ 190 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSI------KLIHIQRSTGYGW 190 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTE------EEEEEESSCCSSS
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCC------EEEEEECCCCCCC
Confidence 445555 5666554 234457999999998 678999999999998 443 5888888 89
Q ss_pred CcccccCChhhHHHHHhh--cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC--CcceeEEEecchh
Q psy3048 94 TGTCAFDNLEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN--HDCSAMWVKNANH 169 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~--~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p--~g~g~l~~~~~~~ 169 (367)
|++|.+.|+++|+++||+ +|++++||++|+.+.+...... . .+|+++.+.||+++++ +..|+++.+ ++.
T Consensus 191 nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~---~---gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~l 263 (427)
T 3hvy_A 191 RKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTD---V---GADIIAGSLIKNIGGGIATTGGYIAGK-EEY 263 (427)
T ss_dssp SCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGG---G---TCSEEEEETTSGGGTTTCCSCEEEEEC-HHH
T ss_pred CccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcc---c---CCeEEEECCcccccccccceEEEEEEC-HHH
Confidence 999999999999999999 8999999999987653322211 1 2599999999999873 233666654 444
Q ss_pred hhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhhH
Q psy3048 170 LTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGL 248 (367)
Q Consensus 170 ~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 248 (367)
+++.... ..+.+.. ..+..+. ..+..++ +.
T Consensus 264 i~~l~~~~~~~~~g~---------------------------------------------~~~~~~~--~a~~~~~--gl 294 (427)
T 3hvy_A 264 VTQATFRVTVPGIGG---------------------------------------------ECGSTFG--VMRSLYE--GL 294 (427)
T ss_dssp HHHHHHHHSCTTTGG---------------------------------------------GCCCCTT--CHHHHHH--HH
T ss_pred HHHHHHHhhcCCccc---------------------------------------------ccCCCHH--HHHHHHH--hH
Confidence 4332110 0000000 0000011 0122222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCce-----eEEEEEcCCchHHHHHHHHHhcc
Q psy3048 249 KGLQAYLRKHISLAKKFADLVEKDDRFELVCPPSMG-----LVCFRLKGDNDLTNQLYERLMSH 307 (367)
Q Consensus 249 ~g~~~~~~~~~~la~~l~~~L~~~~g~~~~~~~~~~-----~v~f~~~~~~~~~~~l~~~L~~~ 307 (367)
.-...++++..+++.++.+.|+++ |+++... ... ++.|.+.+ .+...++++.|...
T Consensus 295 ~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~~~li~~~~l~~-~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 295 FMAPHVTIEAVKGAVFCARIMELA-GFDVLPK-YNDKRTDIIQAIKFND-EKKLIDFIKGIQTA 355 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSEEEEECSS-HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCCceEEEEEeCCC-HHHHHHHHHHhccc
Confidence 334567788899999999999998 6777432 223 77787754 45556788877654
No 214
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.56 E-value=2.7e-12 Score=125.94 Aligned_cols=285 Identities=10% Similarity=0.024 Sum_probs=162.6
Q ss_pred chHHHHHHHhHhhhhcCCCCcccccccCceEEEecCCcchhHHHHHHhCCc------------ceEEEecCCCC---CcC
Q psy3048 2 VSILAAKRKKILDLTSAGPTVSENDIKSRLVAYASDQSNSSVEKSAIIGDV------------PVRQLRSDDNG---VLR 66 (367)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~------------~v~~v~~~~~~---~~d 66 (367)
.||+++|++...+ +.. .++.+|.....-|-....+....|. .+..++....+ ..+
T Consensus 129 ~Aik~a~~~~~~~-g~~---------~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 198 (476)
T 3i5t_A 129 SALRFSEFYNNVL-GRP---------QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRS 198 (476)
T ss_dssp HHHHHHHHHHHHT-TCT---------TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSC
T ss_pred HHHHHHHHHHHhc-CCC---------CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCc
Confidence 4677787776432 101 1245566666666666555544332 23444432111 122
Q ss_pred --------HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhh
Q psy3048 67 --------GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAH 134 (367)
Q Consensus 67 --------~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~ 134 (367)
+++|++++++... ..+.+|++..++++.|.+.+ +++|.++|++||+++++|++|+++......+..
T Consensus 199 ~~~~~~~~~~~le~~i~~~~~--~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~ 276 (476)
T 3i5t_A 199 QEAFLDDLVQEFEDRIESLGP--DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFAS 276 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH
T ss_pred hHHHHHHHHHHHHHHHHhcCC--CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceee
Confidence 7899999875211 11356777777777787655 999999999999999999999865332211111
Q ss_pred h-hCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCC----ccccccCCCCCCCCCCCchhhhhhcccCCCc
Q psy3048 135 L-KRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTD----RVYLKHTDAPMNTQSPDYTVMNWLGKALGLP 208 (367)
Q Consensus 135 ~-~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (367)
. ..++ ..|+++++ |.+.++ ..+|+++.++ +... .+... ..+....
T Consensus 277 ~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~-~i~~-~~~~~~~~~~~~~~~~------------------------ 327 (476)
T 3i5t_A 277 EKVFGV-VPDIITFA--KGVTSGYVPLGGLAISE-AVLA-RISGENAKGSWFTNGY------------------------ 327 (476)
T ss_dssp HHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECH-HHHH-TTSGGGCTTCEECCCC------------------------
T ss_pred ecccCC-Ccchhhhh--hhhcCCCcCeEEEEECH-HHHH-HHhcCCcccccccccC------------------------
Confidence 1 1233 35777665 998876 6778888743 3222 11100 0000000
Q ss_pred chhccCCCCCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCcee
Q psy3048 209 EEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGL 285 (367)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~ 285 (367)
+. .+..+.+.+..++|+.+.. +++.++..++.+++++.|+++ |.+..+. +...+
T Consensus 328 ------------------t~-~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~-~~G~~ 384 (476)
T 3i5t_A 328 ------------------TY-SNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASLRDLPGVAETR-SVGLV 384 (476)
T ss_dssp ------------------TT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEE-EETTE
T ss_pred ------------------CC-CcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCce
Confidence 00 0111222333444544433 345566777777777777654 3343322 23344
Q ss_pred EEEEEcCCc----------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCCC
Q psy3048 286 VCFRLKGDN----------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLPR 355 (367)
Q Consensus 286 v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~~ 355 (367)
+.+.+.... ....++.+.|.++|.+ +.+. + .++|+++ ....+++|+++++++|+++++++..+.
T Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---g-~~iRi~p-~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 385 GCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLI-VRPL---G-DLCVISP-PLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp EEEEECCC-----CCHHHHHHHHHHHHHHHHTTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEecCccccccccchhHHHHHHHHHHHHCCCE-EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 455554321 1255788889989854 4332 3 6899964 456789999999999999998876544
Q ss_pred C
Q psy3048 356 G 356 (367)
Q Consensus 356 ~ 356 (367)
+
T Consensus 459 ~ 459 (476)
T 3i5t_A 459 G 459 (476)
T ss_dssp T
T ss_pred C
Confidence 3
No 215
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.54 E-value=5e-13 Score=130.48 Aligned_cols=230 Identities=13% Similarity=0.079 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCc
Q psy3048 67 GDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV 142 (367)
Q Consensus 67 ~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 142 (367)
+++|++++++... ..+.+|++...+++.|.+.| +++|.++|++||+++++|++|.++......+.....++ ..
T Consensus 205 ~~~le~~i~~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~p 281 (459)
T 4a6r_A 205 ARWLEEKILEIGA--DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QP 281 (459)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CC
T ss_pred HHHHHHHHHHcCC--CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CC
Confidence 7889998875211 11346666666666777777 99999999999999999999976533221111111233 34
Q ss_pred ceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 143 DSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 143 D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
|+++++ |.+.++ ..+|+++.+. +........ ..+...
T Consensus 282 di~t~s--K~l~gg~~~lg~v~~~~-~i~~~~~~~-~~~~~~-------------------------------------- 319 (459)
T 4a6r_A 282 DLFTAA--KGLSSGYLPIGAVFVGK-RVAEGLIAG-GDFNHG-------------------------------------- 319 (459)
T ss_dssp SEEEEC--GGGGTTSSCCEEEEECH-HHHHHHHHH-CTTHHH--------------------------------------
T ss_pred Ceeehh--hhhcCCCCCccceeeCH-HHHHHhhcC-CCcccC--------------------------------------
Confidence 777764 988766 5788887743 322211000 000000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHH-HHHH-HHHHHHHHHHHHHhcCCCCeEEeCCCCceeEEEEEcCC------
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGL-QAYL-RKHISLAKKFADLVEKDDRFELVCPPSMGLVCFRLKGD------ 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~-~~~~~la~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~------ 293 (367)
.+. .+..+.+.+..++|+.+..+.+ ++.. ++...+.+.+.+.|.+++.+..+. +...++.+.+...
T Consensus 320 ----~t~-~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 393 (459)
T 4a6r_A 320 ----FTY-SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR-GVGMVQAFTLVKNKAKREL 393 (459)
T ss_dssp ----HHH-CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE-EETTEEEEEECSBTTTTBC
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-EEEEEEEEEEecCcccccc
Confidence 000 0111222333344444333332 2222 233344444445556665554432 2334555555431
Q ss_pred ----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 ----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 ----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.....++.+.|.++|.+ +.+. + .++|+++ ....+++|+++++++|+++++++..
T Consensus 394 ~~~~~~~~~~~~~~l~~~Gv~-v~~~---g-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 394 FPDFGEIGTLCRDIFFRNNLI-MRAC---G-DHIVSAP-PLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp CSSTTHHHHHHHHHHHHTTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHCCeE-EecC---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12256788889999854 3332 2 6899964 4567899999999999999887653
No 216
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.51 E-value=6.1e-13 Score=128.69 Aligned_cols=225 Identities=9% Similarity=-0.000 Sum_probs=130.0
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... ...+|++...++++|.+.| +++|.++|++||+++++|++|.++ ...........++ .
T Consensus 188 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~ 262 (434)
T 3l44_A 188 NVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-T 262 (434)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-C
T ss_pred cHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-C
Confidence 89999999986421 1246666666667788877 999999999999999999999865 3221111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ .|.++++..+|+++.+ ++.... +..........
T Consensus 263 ~di~t~--sK~~~~G~~iG~~~~~-~~i~~~-~~~~~~~~~~~------------------------------------- 301 (434)
T 3l44_A 263 PDLTAL--GKVIGGGLPIGAYGGK-KEIMEQ-VAPLGPAYQAG------------------------------------- 301 (434)
T ss_dssp CSEEEE--EGGGGTTSSCEEEEEC-HHHHTT-BTTTSSBCCCC-------------------------------------
T ss_pred CCeeeh--hhhhcCCcCeeeEEEc-HHHHHh-hccCCCcccCC-------------------------------------
Confidence 466655 4888888889998664 333321 11100000000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcC----CCCeEEeCCCCceeEEEEEcCC----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEK----DDRFELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~----~~g~~~~~~~~~~~v~f~~~~~---- 293 (367)
...+..+.+.+..++++.+.. +++.++..++.+++++.|++ ++.+... ++..+++.+.+...
T Consensus 302 ------t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 371 (434)
T 3l44_A 302 ------TMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYFTTNTIED 371 (434)
T ss_dssp ------TTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEESSSCCCS
T ss_pred ------CCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEEecCcccc
Confidence 000111222333344444322 34455666666666666654 3222211 22334555655321
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
.....++.+.|.++|+ .+.+. +...+|++ ...+++|+++++++|+++++++..
T Consensus 372 ~~~~~~~~~~~~~~~~~~l~~~Gv-~v~~~---~~~~~rl~---~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 372 YDAAQDTDGEMFGKFFKLMLQEGV-NLAPS---KYEAWFLT---TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHTTE-ECCSS---TTCCEECC---TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCHHHHHHHHHHHHHCCe-EEeec---CCCcEEEe---cccCHHHHHHHHHHHHHHHHHHHh
Confidence 1233678888988884 33322 23467873 356899999999999999887643
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.50 E-value=5.5e-13 Score=128.93 Aligned_cols=222 Identities=9% Similarity=0.010 Sum_probs=129.7
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... .+.+|++...+++.|.+.| +++|.++|++||+++++|++|.++ ...........++ .
T Consensus 186 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~ 260 (429)
T 3k28_A 186 DLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-T 260 (429)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-C
Confidence 89999999985422 1346666666667788888 999999999999999999999765 3221111111222 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ .|.+.++..+|+++.++ +.... +.......... .|
T Consensus 261 ~di~t~--sK~~~~G~~iG~~~~~~-~~~~~-~~~~~~~~~~~---------t~-------------------------- 301 (429)
T 3k28_A 261 PDLTCL--GKVIGGGLPVGAYGGKA-EIMRQ-VAPSGPIYQAG---------TL-------------------------- 301 (429)
T ss_dssp CSEEEE--CGGGGTTSCCEEEEECH-HHHTT-BTTTSSBCCCC---------TT--------------------------
T ss_pred Cceehh--hhhhcCCCCeEEEEEcH-HHHhh-hccCCCccccC---------CC--------------------------
Confidence 466654 49988777888887743 32321 11100000000 00
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEeCCCCceeEEEEEcCC----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DRFELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~~~---- 293 (367)
.+..+.+.+..++++... ++..++..++.+++++.|+++ +.+..+ ++....+.+.+...
T Consensus 302 --------~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 368 (429)
T 3k28_A 302 --------SGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEPVIN 368 (429)
T ss_dssp --------TTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSCCCS
T ss_pred --------CCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCCccc
Confidence 011112233334444332 556667777777777777653 322111 12234445544221
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.....++.+.|.++|++ +.+. +...+|++ ...+++|+++++++|+++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~r~~---~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 369 YDAAKSSNLQFFAAYYREMVEQGVF-LPPS---QFEGLFLS---TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHTTEE-CCSS---TTSCBCCC---TTCCHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccHHHHHHHHHHHHHCCeE-EecC---CCCCEEEE---CCCCHHHHHHHHHHHHHHHHHH
Confidence 12346788889988843 3322 23467773 3568999999999999998764
No 218
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.50 E-value=2e-12 Score=126.69 Aligned_cols=220 Identities=13% Similarity=0.058 Sum_probs=129.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC-
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE- 140 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~- 140 (367)
|+++|++++++....+..+.+|++...++++|.+.| +++|.++|++||+++|+|++|+++......+.....++.
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 689999999764221112457777777788998877 999999999999999999999753321110111112331
Q ss_pred CcceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 141 YVDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
..|+++++ |++. |.|++ + ++. +.. ..+....
T Consensus 321 ~~Di~t~s--K~~l---~GG~~-~-~~~-~~~---~~~~~~~-------------------------------------- 351 (472)
T 1ohv_A 321 PADVMTFS--KKMM---TGGFF-H-KEE-FRP---NAPYRIF-------------------------------------- 351 (472)
T ss_dssp CCSEEEEC--GGGS---SEEEE-E-CGG-GSC---SSSSSSC--------------------------------------
T ss_pred CCCEEEEc--cccc---cCCcc-C-chh-hcc---ccccccc--------------------------------------
Confidence 25887665 8842 12443 3 222 210 0000000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CC-eEEeCCCCceeEEEEEcCCch
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DR-FELVCPPSMGLVCFRLKGDND 295 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g-~~~~~~~~~~~v~f~~~~~~~ 295 (367)
.+..++.+.+.+..++|+.+..+ ++.++..++.+++.++|+++ |+ +.-+. +...++.|.+.. ..
T Consensus 352 ------~T~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~-~~g~~~~~~~~~-~~ 420 (472)
T 1ohv_A 352 ------NTWLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQFISRVR-GRGTFCSFDTPD-ES 420 (472)
T ss_dssp ------CSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE-EETTEEEEECSS-HH
T ss_pred ------CccCccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEeec-CCceEEEEEeCC-hh
Confidence 00011112223444555544332 34567778888888877654 43 32221 233455665543 33
Q ss_pred HHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 296 LTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 296 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
...++.++|.++|.. +.+. +..++|+++ +..++++||++++++|++++++
T Consensus 421 ~~~~~~~~l~~~Gv~-~~~~---g~~~iRi~~-~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 421 IRNKLISIARNKGVM-LGGC---GDKSIRFRP-TLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCeE-EecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 456888899988854 3332 346899965 5678899999999999998765
No 219
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.47 E-value=3.5e-13 Score=130.10 Aligned_cols=223 Identities=11% Similarity=-0.024 Sum_probs=127.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... .+.+|+++.+++++|.+.| +++|.++|++||+++++|++|+++ ...........++ .
T Consensus 185 d~~~le~~l~~~~~---~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~ 259 (427)
T 3fq8_A 185 DLEAVKALFAENPG---EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-T 259 (427)
T ss_dssp CHHHHHHHHHHSTT---TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-C
Confidence 89999999976321 2457777777778899988 999999999999999999999855 3222122212233 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++++ |.++++..+|+++.+ ++.... +.....+.... .|
T Consensus 260 ~di~t~s--K~~~~G~~~G~~~~~-~~~~~~-~~~~~~~~~~~---------t~-------------------------- 300 (427)
T 3fq8_A 260 PDLTTLG--KIIGGGLPVGAYGGK-REIMQL-VAPAGPMYQAG---------TL-------------------------- 300 (427)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEEC-HHHHTT-BTTTSSBCCCC---------TT--------------------------
T ss_pred CChhhhh--hhhhCCcceEEEEEc-HHHHHh-hccCCCccccC---------CC--------------------------
Confidence 4776665 999865668888763 333321 11100000000 00
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGD----- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~----- 293 (367)
.+..+.+.+..++++.+.. +++.++..++.+++++.|+++. ++....+....++.+.+...
T Consensus 301 --------~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 369 (427)
T 3fq8_A 301 --------SGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNY 369 (427)
T ss_dssp --------TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSH
T ss_pred --------CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccc
Confidence 0111122333344444333 3344556666666666665421 11111112234455554321
Q ss_pred -------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 294 -------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 294 -------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
.....++.+.|.++|++ +.+. +.. |+++ ....+++|+++++++|++++++
T Consensus 370 ~~~~~~~~~~~~~l~~~l~~~Gi~-v~~~---~~~--r~~~-~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 370 EDAKKSDLQKFSRFHRGMLEQGIY-LAPS---QFE--AGFT-SLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTEE-CCSS---TTS--CEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHCCcE-EecC---CCC--CEEe-eCcCCHHHHHHHHHHHHHHHHh
Confidence 11245788889888843 3221 112 4433 4566899999999999998765
No 220
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.46 E-value=2.2e-12 Score=124.80 Aligned_cols=224 Identities=10% Similarity=0.011 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... .+.+|+++..++++|.+.| +++|.++|++||+++++|++|+++ .....+.....++ .
T Consensus 189 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~ 263 (434)
T 2epj_A 189 DVEALERVFAEYGD---RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-E 263 (434)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-C
Confidence 89999999975321 1346666665567899888 999999999999999999999854 3222111111232 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ +|+++++..+|+++.++ +.... +.....+. .. ..|
T Consensus 264 ~di~s~--sK~l~~G~~~G~v~~~~-~~~~~-l~~~~~~~-~~--------~t~-------------------------- 304 (434)
T 2epj_A 264 GDIIVL--GKIIGGGFPVGAVAGSR-EVMSL-LTPQGKVF-NA--------GTF-------------------------- 304 (434)
T ss_dssp CSEEEE--EGGGGTTSSCEEEEECH-HHHTT-BTTTSSBC-CC--------CTT--------------------------
T ss_pred CCeeee--cchhcCCcceeeeeecH-HHHHh-hccCCCcc-cC--------CCC--------------------------
Confidence 476644 59998766688888753 32221 11100000 00 000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcCC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKGD----- 293 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~----- 293 (367)
.++.+.+.+..++++.+.. +++.++..++.+++.+.|+++. ++....++..+++.+.+...
T Consensus 305 --------~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 373 (434)
T 2epj_A 305 --------NAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNA 373 (434)
T ss_dssp --------TTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSH
T ss_pred --------CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccc
Confidence 0111122333444544432 3455677788888888876641 33211123345667776531
Q ss_pred -------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 294 -------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 294 -------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.....++.+.|.++|+ .+.+. +...+|+ ....+++|+++++++|+++++++
T Consensus 374 ~~~~~~~~~~~~~~~~~l~~~Gv-~v~~~---~~~~~~~---~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 374 AQARKADKKFYVKLHEEMLRRGV-FIAPS---NLEAVFT---GLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTE-ECCSS---TTSCEEC---CTTCSHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCHHHHHHHHHHHHHCCe-EEecc---CCCcEEE---eccCCHHHHHHHHHHHHHHHHHH
Confidence 1235678888988884 44332 1123554 25668999999999999998775
No 221
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.46 E-value=1.5e-11 Score=119.93 Aligned_cols=210 Identities=11% Similarity=0.037 Sum_probs=117.1
Q ss_pred EEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcce
Q psy3048 85 CCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDCS 160 (367)
Q Consensus 85 ~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 160 (367)
.+|++...++..|.+.| +++|.++|++||+++++|++|.++......+.....++ ..|+++++ |.+..+..+|
T Consensus 227 aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G 303 (453)
T 4ffc_A 227 AAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLS 303 (453)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCE
T ss_pred EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeE
Confidence 34555444444466655 99999999999999999999976433221111111122 24776654 9998777788
Q ss_pred eEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHH
Q psy3048 161 AMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLW 240 (367)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++.+. +.... +. .... ...| .++.+.+.+..
T Consensus 304 ~~~~~~-~i~~~-~~-------~~~~-----~~t~----------------------------------~~~~~~~aaa~ 335 (453)
T 4ffc_A 304 AVTGRA-ELMDA-VY-------AGGL-----GGTY----------------------------------GGNPVTCAAAV 335 (453)
T ss_dssp EEEEEH-HHHTT-SC-------TTSS-----CCSS----------------------------------SSCHHHHHHHH
T ss_pred EEEECH-HHHhh-hc-------ccCc-----CCCC----------------------------------CcCHHHHHHHH
Confidence 887743 32221 10 0000 0000 01111222333
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEeCCCCceeEEEEEcC------CchHHHHHHHHHhccCcE
Q psy3048 241 MTLRSYGLKGLQAYLRKHISLAKKFADLVE----KDDRFELVCPPSMGLVCFRLKG------DNDLTNQLYERLMSHKQI 310 (367)
Q Consensus 241 ~~l~~~~~~g~~~~~~~~~~la~~l~~~L~----~~~g~~~~~~~~~~~v~f~~~~------~~~~~~~l~~~L~~~g~~ 310 (367)
++++.+..+ ++.++..++.+++++.|. +++.+..+. +...++.+.+.. ......++.+.|.++|.+
T Consensus 336 aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 411 (453)
T 4ffc_A 336 AALGVMREL---DLPARARAIEASVTSRLSALAEEVDIIGEVR-GRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVL 411 (453)
T ss_dssp HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCSSEEEEE-EETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-eeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCE
Confidence 444443332 334444555555555544 455544332 223455555532 123456888899999954
Q ss_pred EEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 311 YIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 311 ~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+.+... ...++|+++ ....+++|+++++++|+++++++.
T Consensus 412 -v~~~~~-~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 412 -ILTCGT-FGNVIRLLP-PLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp -CCEECT-TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred -EecCCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 333221 235899964 456689999999999999988764
No 222
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.46 E-value=1e-12 Score=131.01 Aligned_cols=129 Identities=8% Similarity=-0.013 Sum_probs=93.6
Q ss_pred ceEEEecCCcchhHHHHHHhC--CcceEEEecCC--CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC---h
Q psy3048 30 RLVAYASDQSNSSVEKSAIIG--DVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN---L 102 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~--g~~v~~v~~~~--~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d---l 102 (367)
.-.|++++.+|.....++... |++++.+++++ ++.+|+++|++++.+.+ .+|++++++|+||.+-+ +
T Consensus 194 Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~p~NPtG~~~~~~~l 267 (546)
T 2zy4_A 194 GDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAI------KIFFCVNPSNPPSVKMDQRSL 267 (546)
T ss_dssp TCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTE------EEEEEESSCSSSCBCCCHHHH
T ss_pred CCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCC------eEEEEECCCCCCCccCCHHHH
Confidence 345667778999988887654 67888888753 46799999988764433 57778899999999865 6
Q ss_pred hhHHHHH--hhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecc
Q psy3048 103 EELGPIC--QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNA 167 (367)
Q Consensus 103 ~~I~~l~--~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~ 167 (367)
++|+++| +++|+++++|++|+.+........... ...++++.+.+|+++.| ..+|+++..+.
T Consensus 268 ~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~---~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 268 ERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAIC---PENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp HHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHC---GGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred HHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhC---CCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 6788898 889999999999986543211111111 12368888999998643 56899888654
No 223
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.45 E-value=1.5e-11 Score=119.80 Aligned_cols=226 Identities=14% Similarity=0.094 Sum_probs=124.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
+++.+++++++... ...+.+|++...++..|.+.| +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 211 ~~~~~~~~l~~~~~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~ 288 (451)
T 3oks_A 211 AAKRAITVIDKQIG-ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-D 288 (451)
T ss_dssp HHHHHHHHHHHHTC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred HHHHHHHHHHhhcC-CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-C
Confidence 35555566654221 112345555554555566665 99999999999999999999976433221111111222 3
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|++++ .|.+..+..+|+++.+. +.... +. .... . ..|
T Consensus 289 pdi~t~--sK~l~~G~~iG~v~~~~-~~~~~-~~-------~~~~---~--~t~-------------------------- 326 (451)
T 3oks_A 289 PDLIVT--AKGIAGGLPLSAVTGRA-EIMDS-PH-------VSGL---G--GTY-------------------------- 326 (451)
T ss_dssp CSEEEE--CGGGGTTSSCEEEEEEH-HHHTC-SC-------TTSB---C--CSS--------------------------
T ss_pred CCeeee--hhhhhCCcceEEEEECH-HHHhh-hc-------CCCc---C--CCC--------------------------
Confidence 477655 49998877788887743 32221 10 0000 0 000
Q ss_pred ccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEeCCCCceeEEEEEcC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVE----KDDRFELVCPPSMGLVCFRLKG----- 292 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~----~~~g~~~~~~~~~~~v~f~~~~----- 292 (367)
.++.+.+.+..++++.+..+ ++.++..++.+++++.|. +++.+..+. +...++.+.+..
T Consensus 327 --------~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~ 394 (451)
T 3oks_A 327 --------GGNPIACAAALATIETIESE---GLVARAQQIEKIMKDRLGRLQAEDDRIGDVR-GRGAMIAMELVKAGTTE 394 (451)
T ss_dssp --------SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEEBSTTSCC
T ss_pred --------CCCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-EeeEEEEEEEecCccCC
Confidence 01111222333444443332 334455555555555554 445544332 223455555521
Q ss_pred -CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 293 -DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 293 -~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
......++.+.|.++|.+ +.+... ...++|+++ +...+++|+++++++|++++++
T Consensus 395 ~~~~~~~~~~~~l~~~Gv~-v~~~~~-~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 395 PDADLTKALCAGAHAAGVI-VLSCGT-YGNVVRFLP-PLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp BCHHHHHHHHHHHHHTTEE-CEEECT-TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCcE-EecCCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 123456888899999954 333221 235899954 4566899999999999998763
No 224
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.45 E-value=5.8e-12 Score=122.60 Aligned_cols=226 Identities=8% Similarity=-0.046 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... .+.+|+++...+++|.+.| +++|.++|++||+++++|++|+++ .....+.....++ .
T Consensus 187 d~~~le~~l~~~~~---~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~ 261 (453)
T 2cy8_A 187 DIEGMREVFANHGS---DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-Q 261 (453)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-C
T ss_pred CHHHHHHHHHhcCC---CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-C
Confidence 89999999975311 1345655555566898877 999999999999999999999854 3221111111222 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGG 221 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (367)
.|+++ ..|+++++..+|+++.++ +.... +... . .... +
T Consensus 262 ~di~s--~sK~l~~G~~~G~v~~~~-~~~~~-l~~~--~--~~~~--------~-------------------------- 299 (453)
T 2cy8_A 262 PDLTC--LAKASAGGLPGGILGGRE-DVMGV-LSRG--S--DRKV--------L-------------------------- 299 (453)
T ss_dssp CSEEE--EEGGGGTTSSCEEEEECH-HHHTT-SSSC--C-----------------------------------------
T ss_pred CcEEE--EChhhhCCcceEEEechH-HHHHH-hccc--c--CCCc--------e--------------------------
Confidence 47664 459998777789988754 32221 1100 0 0000 0
Q ss_pred ccccccccccccccHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEeCCCCceeEEEEEcC-----
Q psy3048 222 VIQHWQTPLSRRFRALKLWMTLRS-YGLKGLQAYLRKHISLAKKFADLVEKDD---RFELVCPPSMGLVCFRLKG----- 292 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~~~~~la~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~----- 292 (367)
....-.++.+.+.+..++++. + . +++.++..++.+++.+.|+++. ++....++...++.+.+..
T Consensus 300 ---~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~ 372 (453)
T 2cy8_A 300 ---HQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTT 372 (453)
T ss_dssp -------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCC
T ss_pred ---eCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEecccccc
Confidence 000000111222333344444 3 2 3455677778888888776531 2221123344567777753
Q ss_pred C-------------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 293 D-------------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 293 ~-------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
. .....++.+.|.++|+ .+.+ .+ .+|+ +...+++|+++++++|+++++++...
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv-~v~~---~~--~~~l---~~~~t~~~i~~~l~~l~~~l~~~~~~ 438 (453)
T 2cy8_A 373 DTGSITRAEVARPDVKMIAAMRMALILEGV-DIGG---RG--SVFL---SAQHEREHVEHLVTTFDRVLDRLADE 438 (453)
T ss_dssp CCHHHHTTCSCCCCHHHHHHHHHHHHHTTE-ECBT---TT--EEEC---CTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccHHHHHHHHHHHHHCCe-EEeC---CC--CEEe---eccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 1235678888888884 3422 12 2554 35668999999999999998887543
No 225
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.43 E-value=5.8e-12 Score=121.66 Aligned_cols=222 Identities=11% Similarity=0.080 Sum_probs=124.6
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... ...+|++...++..|.+.| +++|.++|++||+++++|++|+++ ...........++ .
T Consensus 186 d~~~le~~l~~~~~---~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~ 260 (429)
T 4e77_A 186 DLASVRQAFEQYPQ---EVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-I 260 (429)
T ss_dssp CHHHHHHHHHHSTT---TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-C
T ss_pred CHHHHHHHHHhcCC---CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-C
Confidence 89999999975321 1345555555556677777 999999999999999999999855 3221111112233 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCC-ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD-RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ .|.++++..+|+++.+ ++.... +... ..+...
T Consensus 261 pdi~t~--sK~~~~G~~~G~~~~~-~~~~~~-l~~~~~~~~~~------------------------------------- 299 (429)
T 4e77_A 261 PDLTCL--GKIIGGGMPVGAFGGR-REVMNA-LAPTGPVYQAG------------------------------------- 299 (429)
T ss_dssp CSEEEE--EGGGGTTSCCEEEEEC-HHHHTT-BTTTSSBCC---------------------------------------
T ss_pred CCeeee--cccccCCCCeEEEEEC-HHHHHH-hccCCCccccC-------------------------------------
Confidence 476654 4999877778887764 332321 1100 000000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCCc---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGDN--- 294 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~~--- 294 (367)
.-....+.+.+..++++.+.. +++.++..++.+++++.|+++ .++....+....++.+.+....
T Consensus 300 -------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 369 (429)
T 4e77_A 300 -------TLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVT 369 (429)
T ss_dssp -------CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCC
T ss_pred -------CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccc
Confidence 000111222333444544322 344555666666666666542 0221111223345556654321
Q ss_pred ----------hHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 295 ----------DLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 295 ----------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
....++.+.|.++|++ +.+. +...+|+ ....+++|+++++++|++++++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~---~~~~~~~---~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 370 CYQDVMNCDVERFKRFFHLMLEEGVY-LAPS---AFEAGFM---SLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp SHHHHHTSCHHHHHHHHHHHHHTTEE-CCSS---TTSCEEC---CTTCCHHHHHHHHHHHHHHHTT
T ss_pred cccccccccHHHHHHHHHHHHHCCeE-Eeec---CCCCEEE---eccCCHHHHHHHHHHHHHHHHh
Confidence 2336888899989843 3322 2223554 3556899999999999998753
No 226
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.43 E-value=7.3e-13 Score=126.66 Aligned_cols=241 Identities=12% Similarity=0.005 Sum_probs=145.7
Q ss_pred EEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 32 VAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 32 ~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
.|++++.+|.++...++..|++++.++.+.++ ++ .+. +.+|++++++|+||.+.+ +|++.++.
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-l~--------~~~------~k~v~l~~p~NPtG~~~~--~l~~~~~~ 183 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRSGMYKWEGDAWG-FD--------KKG------PYIELVTSPNNPDGTIRE--TVVNRPDD 183 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCBTTEEEEEESTT-CC--------CCS------CEEEEEESSCTTTCCCCC--CCC-----
T ss_pred eEEEcCCCchhHHHHHHHcCCeEEEecCCHHH-cC--------CCC------CEEEEECCCCCCCchhHH--HHHHHhhc
Confidence 78888999999999999999999999886432 11 011 357778999999999975 55442222
Q ss_pred cCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCC
Q psy3048 112 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNT 190 (367)
Q Consensus 112 ~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 190 (367)
+++++++|++|+.... .. +......++++.+.+|.++.| ..+|+++..+++.+...... ..+...
T Consensus 184 ~~~~ii~De~y~~~~~--~~----l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~-~~~~~~------- 249 (391)
T 3bwn_A 184 DEAKVIHDFAYYWPHY--TP----ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEY-IIVNSI------- 249 (391)
T ss_dssp CCCEEEEECTTCSTTT--SC----CCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHH-HHHHHS-------
T ss_pred CCCEEEEeCCCCCCCC--Cc----cccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHH-hccccc-------
Confidence 3399999999973111 00 111123478899999988633 44688887444433221100 000000
Q ss_pred CCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHhh---------HHHHHHHHHHHHHH
Q psy3048 191 QSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSYG---------LKGLQAYLRKHISL 261 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~g~~~~~~~~~~l 261 (367)
....+....+..++.... .+.+++..++..+.
T Consensus 250 ---------------------------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
T 3bwn_A 250 ---------------------------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNR 290 (391)
T ss_dssp ---------------------------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHH
Confidence 001011222333333211 34577788888899
Q ss_pred HHHHHHHhcCCCCeEEeCCCCc-------------eeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEEC--CeeEEEEE
Q psy3048 262 AKKFADLVEKDDRFELVCPPSM-------------GLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQ--GRPFLRFV 326 (367)
Q Consensus 262 a~~l~~~L~~~~g~~~~~~~~~-------------~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~lRi~ 326 (367)
.+++.+.|++++++++..+... ..+++.++. . ..+.+.|.+.|+ .+.++... +.+++|++
T Consensus 291 ~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~-~---~~~~~~l~~~gV-~v~pg~~fg~~~~~iRis 365 (391)
T 3bwn_A 291 WEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE-E---TDLVSELRRHKV-MSRAGERCGSDKKHVRVS 365 (391)
T ss_dssp HHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS-S---CCHHHHHHHTTE-ECEEGGGGTCCTTEEEEE
T ss_pred HHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc-H---HHHHHHHHHCCE-EEccCCCCCCCCCEEEEE
Confidence 9999999999888876543211 145566653 1 245555666774 44443222 25699997
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 327 VTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 327 ~~~~~~~~edid~li~~l~~~~~~ 350 (367)
+. ++++++++++++|++++++
T Consensus 366 ~~---~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 366 ML---SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp SC---SCHHHHHHHHHHHHSCC--
T ss_pred ec---CCHHHHHHHHHHHHHHHHh
Confidence 64 3789999999999887553
No 227
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.42 E-value=1.1e-12 Score=125.96 Aligned_cols=256 Identities=16% Similarity=0.154 Sum_probs=152.7
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEec-C-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecC-CCccccc---CChhh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLG-TTGTCAF---DNLEE 104 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~-~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~-~t~~G~i---~dl~~ 104 (367)
-.|++.+.++......++..|++++.+++ + +++.+|+++|++++++..+ ..+++++.+ +||||.+ +.+++
T Consensus 123 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~NPTG~~~s~~~~~~ 198 (405)
T 3k7y_A 123 ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCYNPCSVNIEEKYFDE 198 (405)
T ss_dssp CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSCTTTCCCCCHHHHHH
T ss_pred CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCCCCCCCCCCHHHHHH
Confidence 46677888999999999999999999987 3 3589999999999975321 136666554 7999998 56778
Q ss_pred HHHHHhhcCcEEEEecccccccccC-h----hhhhhhCCCCCcceeeeccccccc-cCCcceeEEE--ecchhhhhhccC
Q psy3048 105 LGPICQEYNIWLHVDAAYAGSALLL-P----EYAHLKRGLEYVDSFAFNAHKWLL-TNHDCSAMWV--KNANHLTNTFFT 176 (367)
Q Consensus 105 I~~l~~~~gi~l~vD~a~~~~~~~~-~----~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~~--~~~~~~~~~~~~ 176 (367)
|+++|++||+++++|++|....+.. + ...... ....--+++.+..|.++ .+..+|+++. .+++........
T Consensus 199 l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~ 277 (405)
T 3k7y_A 199 IIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE-EKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNN 277 (405)
T ss_dssp HHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH-TTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH-hcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHH
Confidence 8899999999999999997654321 1 111111 11111355677899997 5688999864 233322211000
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHH--h---hHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRS--Y---GLKGL 251 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~---~~~g~ 251 (367)
- ..+.... +. ....+.+..+..++.. + ..+.+
T Consensus 278 l-~~~~~~~----------------------------------------~~--~~~~~~q~~~~~~l~~~~l~~~~~~~l 314 (405)
T 3k7y_A 278 L-CFIVRKF----------------------------------------YS--SPVIHTNRILCQLLNNQNLKLNWIKEL 314 (405)
T ss_dssp H-HHHHHTT----------------------------------------TS--SCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred H-HHHHhcc----------------------------------------cC--CCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0 0000000 00 0000111111222221 1 12234
Q ss_pred HHHHHHHHHHHHHHHHHhc----CCC---CeEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEE
Q psy3048 252 QAYLRKHISLAKKFADLVE----KDD---RFELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLR 324 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~----~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 324 (367)
++..++..+.++++.+.|+ +++ ++++. +|+.+...+ +. .+.+.+++|.+.| +++.|+ + |
T Consensus 315 ~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~-~~----l~~~~~~~L~~~g-V~v~p~---~----R 380 (405)
T 3k7y_A 315 SQLSQRITNNRILFFNKLETYQKKYNLNYDWNVY-KKQRGLFSF-VP----LLAKIAEHLKTHH-IYIINN---G----R 380 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSSEEE-CG----GGGGGTTTTTTTT-EECCTT---S----E
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccc-cCCceEEEe-cC----CCHHHHHHHHHCC-EeecCC---C----e
Confidence 5555667788888888888 662 14433 344555433 21 1224456774445 555442 1 9
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 325 FVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 325 i~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
|+++ ..++++|++++++|++++++
T Consensus 381 is~a--~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 381 INVS--GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp EEGG--GCCTTHHHHHHHHHHHHHHC
T ss_pred EEEe--ccCHHHHHHHHHHHHHHHhh
Confidence 9764 33678999999999998764
No 228
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.40 E-value=1.3e-11 Score=117.25 Aligned_cols=237 Identities=14% Similarity=0.096 Sum_probs=152.2
Q ss_pred eEEEecC-CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecccccccccChhh
Q psy3048 54 VRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEY 132 (367)
Q Consensus 54 v~~v~~~-~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~ 132 (367)
+...+++ +++.+|.+++++...+.. |.+|+... +..-...|++++.+||++.|+++++|.||-+|.+....+
T Consensus 178 ~~~Y~vd~~t~~IDyd~~~~~A~~~k-----PklIi~G~--SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ 250 (490)
T 3ou5_A 178 SMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 250 (490)
T ss_dssp --CBCEETTTTEECHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred ccccccCCCCCcccHHHHHHHHhhcC-----CCeEEECC--ccCccccCHHHHHHHHhhcccEEEechhhhhhhhccccc
Confidence 3334444 579999999999987765 66665543 334455689999999999999999999998877765544
Q ss_pred hhhhCCCCCcceeeeccccccccCCcceeEEEecchh-------------hhhhccCCccccccCCCCCCCCCCCchhhh
Q psy3048 133 AHLKRGLEYVDSFAFNAHKWLLTNHDCSAMWVKNANH-------------LTNTFFTDRVYLKHTDAPMNTQSPDYTVMN 199 (367)
Q Consensus 133 ~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~~~~~~~-------------~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 199 (367)
+. .+..||+++.+.||.|.+|. .|+++++++.. +.+.+ -.-++++
T Consensus 251 ps---P~~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kki---n~aVFPg--------------- 308 (490)
T 3ou5_A 251 PS---PFKHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRI---NFAVFPS--------------- 308 (490)
T ss_dssp CC---GGGTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHH---HHHHTTT---------------
T ss_pred CC---ccccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHH---HhhcCcc---------------
Confidence 43 24467999999999999885 56777765310 00000 0001111
Q ss_pred hhcccCCCcchhccCCCCCCCCccccccccccccccHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy3048 200 WLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRAL-KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDDRFELV 278 (367)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~g~~~~ 278 (367)
+++++....+ +...++.......+.++.++..++++.|.+.|.+. |++++
T Consensus 309 ----------------------------~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vv 359 (490)
T 3ou5_A 309 ----------------------------LQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLV 359 (490)
T ss_dssp ----------------------------TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG
T ss_pred ----------------------------ccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeee
Confidence 1122222222 22334444344556778888899999999999886 99997
Q ss_pred C-CCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEE------CCeeEEEEEe---cCCCCCHHHHHHHHHHHHHHH
Q psy3048 279 C-PPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASF------QGRPFLRFVV---TSPETNQCDVAFAWNEISHQS 348 (367)
Q Consensus 279 ~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~------~~~~~lRi~~---~~~~~~~edid~li~~l~~~~ 348 (367)
. ....+.+.+.+.+.+...++..+.|.+.|+. +-.... ..+..||+.. +.....++|++.+.+.|.+++
T Consensus 360 sGgTdnHlvLvDl~~~g~tG~~ae~~Le~agIt-vNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 360 SGGTDNHLVLVDLRPKGLDGARAERVLELVSIT-ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp GGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEE-CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEeccccCCCHHHHHHHHHHcCcE-ECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 5 3466777777754332344555666666743 322111 1134799954 334567899999999988766
Q ss_pred H
Q psy3048 349 S 349 (367)
Q Consensus 349 ~ 349 (367)
.
T Consensus 439 ~ 439 (490)
T 3ou5_A 439 N 439 (490)
T ss_dssp H
T ss_pred H
Confidence 4
No 229
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.34 E-value=3.5e-11 Score=115.97 Aligned_cols=219 Identities=13% Similarity=0.058 Sum_probs=126.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++... .+.+|+++..++++|.+.| +++|.++ ++||+++++|++|+++ .....+.....++ .
T Consensus 185 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~ 258 (424)
T 2e7u_A 185 DPEGLREVLKRRGE---EIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-K 258 (424)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-C
Confidence 89999999975311 1245555544445898877 9999999 9999999999999865 3222111111232 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccC-CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT-DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++ +..|+++++..+|+++.++ +... .+.. ...+... .|
T Consensus 259 ~di~--s~sK~l~~G~~~G~~~~~~-~~~~-~~~~~~~~~~~~----------t~------------------------- 299 (424)
T 2e7u_A 259 PDLV--TLGKILGGGLPAAAYAGRR-EIME-KVAPLGPVYQAG----------TL------------------------- 299 (424)
T ss_dssp CSEE--EECGGGGTTSSCEEEEECH-HHHT-TBTTTSSBCCCC----------TT-------------------------
T ss_pred cchh--hhhhhhhCCcceEEEEEcH-HHHh-hhcccCCcccCC----------CC-------------------------
Confidence 4765 5579999766788888754 3222 1111 0000000 00
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCceeEEEEEcCC----
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMGLVCFRLKGD---- 293 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~~v~f~~~~~---- 293 (367)
.++.+.+.+..++++.+.. .+++.++..++.++++++|+++ .++....++..+++.+.+...
T Consensus 300 ---------~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~ 368 (424)
T 2e7u_A 300 ---------SGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVT 368 (424)
T ss_dssp ---------CSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCS
T ss_pred ---------CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcc
Confidence 0111122333344444322 2456677788888888888664 133111123344666666431
Q ss_pred --------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 294 --------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 294 --------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
.....++.+.|.++|+ .+.+. +...+|+ ....+++|+++++++|+++
T Consensus 369 ~~~~~~~~~~~~~~~~~~l~~~Gv-~v~~~---~~~~~~~---~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 369 FQDARRTDTELFKRFFHGLLDRGI-YWPPS---NFEAAFL---SVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp HHHHTTSCHHHHHHHHHHHHTTTE-ECCSS---SSSCEEC---CTTCCHHHHHHHHHHHHHH
T ss_pred hhhhcccCHHHHHHHHHHHHHCCe-EEecc---CCCceEe---eccCCHHHHHHHHHHHHHh
Confidence 1235578888988884 44332 1123554 2556899999999999875
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.31 E-value=2.1e-11 Score=117.37 Aligned_cols=262 Identities=13% Similarity=0.036 Sum_probs=153.3
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceE-EEec--CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChh
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVR-QLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLE 103 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~-~v~~--~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~ 103 (367)
.-.|++++..+.+....++..|.+.+ ..+. ++++.+|.+.+.+.++..++. .++++.+.++||||.. +.++
T Consensus 137 gd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~---~~vll~~~p~NPtG~~~~~~~~~ 213 (420)
T 4h51_A 137 TTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDG---SVFILHQCAHNPTGVDPSQEQWN 213 (420)
T ss_dssp TSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSS---CEEEEESSSCTTTCCCCCHHHHH
T ss_pred CCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCC---cEEEEeCCCCCCCCCCCCHHHHH
Confidence 34567788899888888889998744 3333 246788999999988765432 3577788899999998 6788
Q ss_pred hHHHHHhhcCcEEEEecccccccccChhhhh---h-hCCCCCcceeeecccccccc-CCcceeEEEecchh--hhhhccC
Q psy3048 104 ELGPICQEYNIWLHVDAAYAGSALLLPEYAH---L-KRGLEYVDSFAFNAHKWLLT-NHDCSAMWVKNANH--LTNTFFT 176 (367)
Q Consensus 104 ~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~---~-~~~~~~~D~~~~~~hK~l~~-p~g~g~l~~~~~~~--~~~~~~~ 176 (367)
+|+++|++++++++.|.+|..+.+....... . ......--+++.+..|.++. ...+|++.+..... ..+....
T Consensus 214 ~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~ 293 (420)
T 4h51_A 214 EIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSV 293 (420)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHH
Confidence 9999999999999999999876543211110 0 00011113455678897654 47799988754321 1111000
Q ss_pred CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHH-----HHHhhHHHH
Q psy3048 177 DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMT-----LRSYGLKGL 251 (367)
Q Consensus 177 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~g~ 251 (367)
. ..+..... ...+...+...... +.....+-+
T Consensus 294 l-~~~~r~~~------------------------------------------s~~p~~~a~~~~~~l~d~~l~~~~~~~~ 330 (420)
T 4h51_A 294 M-DSLIREEY------------------------------------------TCPPAHGARLAHLILSNNELRKEWEAEL 330 (420)
T ss_dssp H-HHHHHTTT------------------------------------------SSCCHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred H-HHhhhccc------------------------------------------CcchHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 0 00000000 00000001111111 111223445
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC--C-eEEeCCCCceeEEEEEcCCchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEec
Q psy3048 252 QAYLRKHISLAKKFADLVEKDD--R-FELVCPPSMGLVCFRLKGDNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVT 328 (367)
Q Consensus 252 ~~~~~~~~~la~~l~~~L~~~~--g-~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~ 328 (367)
+.+.++..++++.+.+.|++.. + |..+ +++.++++| .+. +.+..+.|.+.| +|+.++ | ||++.
T Consensus 331 ~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i-~~q~GmF~~--~gl---s~e~v~~L~e~~-Vy~~~~---g----Ris~A 396 (420)
T 4h51_A 331 SAMAERIRTMRRTVYDELLRLQTPGSWEHV-INQIGMFSF--LGL---SKAQCEYCQNHN-IFITVS---G----RANMA 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCTHH-HHCCSSEEE--CCC---CHHHHHHHHHTT-EECCTT---C----EEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCee-cCCCceEEe--cCc---CHHHHHHHHhCC-EEEcCC---C----EEEec
Confidence 6667778888888999888752 1 2212 234465554 221 345567777776 454332 1 88764
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 329 SPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 329 ~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
. .+++.|++++++|.++++++.+
T Consensus 397 g--l~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 397 G--LTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp G--CCHHHHHHHHHHHHHHHC----
T ss_pred c--CCHHHHHHHHHHHHHHHHHhhc
Confidence 3 4789999999999999887654
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.23 E-value=3e-11 Score=116.82 Aligned_cols=241 Identities=10% Similarity=-0.002 Sum_probs=148.3
Q ss_pred CceEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 29 SRLVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+.-.|+++...|..+...++..|++++.+ .+|+++|++++++.+ .+|++++++|++|.+.+ + +
T Consensus 154 ~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~~~~------k~v~l~~p~NPtG~~~~-~----~ 216 (427)
T 2hox_A 154 PESKVVAHAPFYPVFREQTKYFDKKGYVW------AGNAANYVNVSNPEQ------YIEMVTSPNNPEGLLRH-A----V 216 (427)
T ss_dssp CCEEEEECSSCCHHHHHHHHHSCBTTEEE------EEEGGGGTTCSCGGG------EEEEEESSCTTTCCCCC-C----S
T ss_pred CCCEEEEeCCCcccHHHHHHHcCCeeeee------cCCHHHHHHhhcCCc------eEEEEcCCCCCcccccH-H----H
Confidence 34567888999999999999999988743 357788888776544 47788899999999988 4 3
Q ss_pred HhhcCcEEEEecccccccccChhhhhhhCCC-CCcceeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCC
Q psy3048 109 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDA 186 (367)
Q Consensus 109 ~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 186 (367)
++ ++..+.|.++-.... .. ..+ ...++++.+.+|.++.| ..+|+++.++++.+....... .+...
T Consensus 217 l~--~~~~i~d~~~~~~~~---s~----~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~-~~~~~--- 283 (427)
T 2hox_A 217 IK--GCKSIYDMVYYWPHY---TP----IKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM-TKNTE--- 283 (427)
T ss_dssp ST--TCEEEEECTTCSTTT---SC----CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH-HHHTS---
T ss_pred Hc--CCCEEEeecccCCCC---Cc----cccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHH-HhcCC---
Confidence 33 567888877632100 00 011 23489999999988643 448999886554443221100 00000
Q ss_pred CCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHHHHHHHHh----------hHHHHHHHHH
Q psy3048 187 PMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKLWMTLRSY----------GLKGLQAYLR 256 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~g~~~~~~ 256 (367)
....+....+..+|... ..+-+++..+
T Consensus 284 -------------------------------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~ 320 (427)
T 2hox_A 284 -------------------------------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK 320 (427)
T ss_dssp -------------------------------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHH
T ss_pred -------------------------------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHH
Confidence 00001111222223221 0123455667
Q ss_pred HHHHHHHHHHHHhcCCCCeEE--eC-C----------C-CceeEEEEEcCCchHHHHHHHHHh-ccCcEEEEEeE-EC-C
Q psy3048 257 KHISLAKKFADLVEKDDRFEL--VC-P----------P-SMGLVCFRLKGDNDLTNQLYERLM-SHKQIYIIKAS-FQ-G 319 (367)
Q Consensus 257 ~~~~la~~l~~~L~~~~g~~~--~~-~----------~-~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~-~ 319 (367)
+..+..+++.+.|++++|+.+ +. + | ....++++++. ...++.+.|. +.|+ .+.++. +. +
T Consensus 321 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI-~v~pg~~f~~~ 396 (427)
T 2hox_A 321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRI-NTQNGVGFEAS 396 (427)
T ss_dssp HHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTE-ECEEGGGGTSC
T ss_pred HHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCE-EEcCCCccCCC
Confidence 788889999999999888876 22 1 1 23445566653 1345666665 5664 444432 22 3
Q ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy3048 320 RPFLRFVVTSPETNQCDVAFAWNEISHQSS 349 (367)
Q Consensus 320 ~~~lRi~~~~~~~~~edid~li~~l~~~~~ 349 (367)
..++|+++. +++++++.+++.|+++++
T Consensus 397 ~~~~Ris~~---~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 397 SRYVRLSLI---KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp TTEEEEECS---SCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence 579999775 278999999999988864
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.07 E-value=2.1e-09 Score=104.21 Aligned_cols=221 Identities=11% Similarity=0.043 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|.+.+++.+++...+ ..+|++.-.....|.+.| +++|.++|++||+++++|+.+.+ .....+.....++ .
T Consensus 206 d~~~l~~~l~~~~~~---iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv-~ 279 (454)
T 4ao9_A 206 DAQTARAQIERHGPE---IAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGI-R 279 (454)
T ss_dssp CHHHHHHHHHHTGGG---EEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTC-C
T ss_pred hHHHHHHHHhhcCCc---eEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCC-C
Confidence 889999999865432 345666555566788877 99999999999999999999974 2111111111244 4
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccCC-ccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFTD-RVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGG 220 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (367)
.|++++ -|.+++....|.+..+.+ ... .+... ..+...
T Consensus 280 PDi~t~--gK~lggG~Piga~~~~~e-i~~-~~~~~~~~~~h~------------------------------------- 318 (454)
T 4ao9_A 280 SDLTTL--GKYIGGGMSFGAFGGRAD-VMA-LFDPRTGPLAHS------------------------------------- 318 (454)
T ss_dssp CSEEEE--EGGGGTTSSCEEEEECHH-HHG-GGCTTTCSCCCC-------------------------------------
T ss_pred CcEEEe--ccccCCCCcceeeeeHHH-HHH-HHhhccCCcccc-------------------------------------
Confidence 588765 477777667788777543 221 11110 011000
Q ss_pred CccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC---Ce--EEeCCCCceeEEEEEcC---
Q psy3048 221 GVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD---RF--ELVCPPSMGLVCFRLKG--- 292 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~---g~--~~~~~~~~~~v~f~~~~--- 292 (367)
.+. .++...+.+..+.|+.+..+ +..++..++.++|+++|+++- ++ ++-.- -.++.+.+..
T Consensus 319 -----~T~-~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~--G~m~gi~f~~~~~ 387 (454)
T 4ao9_A 319 -----GTF-NNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGI--GSLMNAHFVQGDV 387 (454)
T ss_dssp -----CTT-TTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE--TTEEEEESCCSCC
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee--ceEEEEEEecCCC
Confidence 011 11112233444556655443 344566677777777775531 11 11110 1122222211
Q ss_pred ---------CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy3048 293 ---------DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNL 353 (367)
Q Consensus 293 ---------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~ 353 (367)
+......+...|+++|+ ++.| ...+.+ +.+ .|++|||+++++|++++.+...
T Consensus 388 ~~~~~~~~~d~~~~~~~~~~ll~~Gv-~~~p-----~~~~~~--s~~-~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 388 RSSEDLAAVDGRLRQLLFFHLLNEDI-YSSP-----RGFVVL--SLP-LTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp CSGGGGTTCCHHHHHHHHHHHHHTTE-ECCT-----TCEEEC--CTT-CCHHHHHHHHHHHHHHHHHSGG
T ss_pred CCHHHHHhhhHHHHHHHHHHHHHCCE-EEcC-----CCCEEE--eCC-CCHHHHHHHHHHHHHHHHhccc
Confidence 01233466677888884 4432 123333 333 4799999999999999988654
No 233
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.64 E-value=1.5e-11 Score=119.89 Aligned_cols=221 Identities=9% Similarity=-0.023 Sum_probs=124.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCC
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY 141 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~ 141 (367)
|+++|++++++.. ..+.+|++....+++|.+.| +++|.++|++||+++++|++|+ + ...........++ .
T Consensus 219 d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv-~ 292 (465)
T 2yky_A 219 DVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGI-S 292 (465)
Confidence 7899999997421 11235555554566898766 9999999999999999999998 4 2111111111122 2
Q ss_pred cceeeeccccccccCCcceeEEEecchhhhhhccC---CccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCC
Q psy3048 142 VDSFAFNAHKWLLTNHDCSAMWVKNANHLTNTFFT---DRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGP 218 (367)
Q Consensus 142 ~D~~~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (367)
.|+++ ..|+++++..+|+++.+.. .... +.. .+.+...
T Consensus 293 pDi~t--~sK~lg~G~piG~v~~~~~-i~~~-l~~~~~g~~~~~~----------------------------------- 333 (465)
T 2yky_A 293 ADLTT--LGKYIGGGMSFGAFGGRRD-LMER-FDPARDGAFAHAG----------------------------------- 333 (465)
Confidence 46654 5699987666787776432 2221 110 0000000
Q ss_pred CCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEeC--CCCceeEEEEEcC---
Q psy3048 219 GGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKDD-RFELVC--PPSMGLVCFRLKG--- 292 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~~-g~~~~~--~~~~~~v~f~~~~--- 292 (367)
+. .++...+.+..++|+.+..+ ++.++..++.++++++|+++. +..+.. +....++.+.+..
T Consensus 334 --------T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~ 401 (465)
T 2yky_A 334 --------TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPI 401 (465)
Confidence 00 01111123333445544332 456677888888888887752 222211 2233445554432
Q ss_pred ---------CchHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhh
Q psy3048 293 ---------DNDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMN 352 (367)
Q Consensus 293 ---------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~ 352 (367)
+.....++.+.|.++|.+ +.+..+. . ++ ...+++|||+++++|+++++++.
T Consensus 402 ~~~~~~~~~d~~~~~~~~~~ll~~GV~-v~p~~~~---~--~s---~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 402 RSAGDVRAADQQLKELFFFHMLRKGIY-LAPRGMY---A--LS---LEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 011245688888888854 4433221 1 32 34579999999999999887653
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.99 E-value=2.7e-08 Score=97.05 Aligned_cols=230 Identities=10% Similarity=0.046 Sum_probs=126.3
Q ss_pred HHHHHHHHHHhhCCCccEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcc
Q psy3048 68 DALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 143 (367)
Q Consensus 68 ~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 143 (367)
+++++.+.+... ....+|++--....-|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|
T Consensus 223 ~~l~~~i~~~~~--~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PD 299 (473)
T 4e3q_A 223 RELEETIQREGA--DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPD 299 (473)
T ss_dssp HHHHHHHHHHCG--GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCS
T ss_pred HHHHHHHHhhCC--CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCC
Confidence 445555544321 12345555555555566633 89999999999999999999987643332222222344 458
Q ss_pred eeeeccccccccC-CcceeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCc
Q psy3048 144 SFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGV 222 (367)
Q Consensus 144 ~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (367)
+++++ |.+.+. .-+|.++.+++- .. .+............
T Consensus 300 i~t~~--K~l~gG~~Pl~av~~~~~i-~~-~~~~~~~~~~~~~h------------------------------------ 339 (473)
T 4e3q_A 300 AIISS--KNLTAGFFPMGAVILGPEL-SK-RLETAIEAIEEFPH------------------------------------ 339 (473)
T ss_dssp EEEEC--GGGGTTSSCCEEEEECHHH-HH-HHHHHHHHHSCCCC------------------------------------
T ss_pred hHHhc--ccccCCCCCcccccccHHH-HH-Hhcccccccccccc------------------------------------
Confidence 87764 777665 567888876532 11 11000000000000
Q ss_pred cccccccccccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEeCCCCce-eEEEEEcCC-----
Q psy3048 223 IQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD---DRFELVCPPSMG-LVCFRLKGD----- 293 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~---~g~~~~~~~~~~-~v~f~~~~~----- 293 (367)
..+. .+....+....+.|+.+..++ +.++..++.++|.++|+++ +.+.=+ ...+ ++.+.+..+
T Consensus 340 --g~T~-~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~v--RG~Gl~~gielv~~~~~~~ 411 (473)
T 4e3q_A 340 --GFTA-SGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGEY--RGIGFMWALEAVKDKASKT 411 (473)
T ss_dssp --CCTT-TTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTB
T ss_pred --CCCC-CCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeEE--eecceEEEEEEecCccccc
Confidence 0000 111122234445555555544 3445667777777777553 333111 1111 233433211
Q ss_pred -----chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhhCC
Q psy3048 294 -----NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEMNLP 354 (367)
Q Consensus 294 -----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~~~~ 354 (367)
......+.+.+.++|.+ +.+. + ..+|+++ ....+++|+|.+++.|++.++++..+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~Gll-~~~~---g-~~i~l~P-PL~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 412 PFDGNLSVSERIANTCTDLGLI-CRPL---G-QSVVLCP-PFILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp CCCGGGCHHHHHHHHHHHTTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 12346788889999954 3322 3 4789854 45678999999999999999887543
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.99 E-value=2.3e-07 Score=90.08 Aligned_cols=210 Identities=10% Similarity=-0.004 Sum_probs=119.4
Q ss_pred cEEEEEecCCCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCCCcceeeeccccccccCCcc
Q psy3048 84 PCCLVATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFAFNAHKWLLTNHDC 159 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 159 (367)
...|++.-.....|.+.| +++|.++|++||+++++|+.+.++.....-+.....++ ..|+++++ |.+++..-.
T Consensus 227 iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~ 303 (456)
T 4atq_A 227 VAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPL 303 (456)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSC
T ss_pred eEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCc
Confidence 445666555555676644 89999999999999999999987543322222222344 46988875 777776677
Q ss_pred eeEEEecchhhhhhccCCccccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCCCCCCCccccccccccccccHHHH
Q psy3048 160 SAMWVKNANHLTNTFFTDRVYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSKGPGGGVIQHWQTPLSRRFRALKL 239 (367)
Q Consensus 160 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|.++.+++- .. .+ .+..... + -.+....+.+.
T Consensus 304 ~av~~~~~i-~~-~~--~~~~~~~-------------------------------------------T-f~gnpla~aaa 335 (456)
T 4atq_A 304 SAITGRADL-LD-AV--HPGGLGG-------------------------------------------T-YGGNPVACAAA 335 (456)
T ss_dssp EEEEEEHHH-HT-TS--CTTSSCC-------------------------------------------S-SSSCHHHHHHH
T ss_pred eeeEecHHH-Hh-cc--cccCCCC-------------------------------------------C-CCCChHHHHhh
Confidence 888876432 11 11 0100000 0 01122233444
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCC----CC--eEEeCC-CCc-eeEEEEEcCC------chHHHHHHHHHh
Q psy3048 240 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEKD----DR--FELVCP-PSM-GLVCFRLKGD------NDLTNQLYERLM 305 (367)
Q Consensus 240 ~~~l~~~~~~g~~~~~~~~~~la~~l~~~L~~~----~g--~~~~~~-~~~-~~v~f~~~~~------~~~~~~l~~~L~ 305 (367)
.+.|+.+..+++ .++..++.+++.++|+++ +. -.++.+ ... .++.+.+..+ ......+.+.+.
T Consensus 336 la~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~ 412 (456)
T 4atq_A 336 LAAIDTMEQHDL---NGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACL 412 (456)
T ss_dssp HHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHH
Confidence 555665555543 445566666666666542 11 111111 111 2334444221 234567888899
Q ss_pred ccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy3048 306 SHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSE 350 (367)
Q Consensus 306 ~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~ 350 (367)
++|.+. .+.. .....+|+.+ ....|++|+|++++.|++.++.
T Consensus 413 ~~Gvl~-~~~g-~~~~~irl~P-pL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 413 KEGVII-LTCG-TYGNVIRLLP-PLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HTTEEC-EEEC-TTSCEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCCEE-EecC-CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 999543 2221 1235899954 4567899999999999999875
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.85 E-value=6.2e-08 Score=100.71 Aligned_cols=229 Identities=13% Similarity=0.062 Sum_probs=115.8
Q ss_pred HHHHHHHHHHh--hCCCccEEEEEecC-CCcccccCC----hhhHHHHHhhcCcEEEEecccccccccChhhhhhhCCCC
Q psy3048 68 DALLTAVKEDL--AKGLIPCCLVATLG-TTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 140 (367)
Q Consensus 68 ~~L~~~l~~~~--~~~~~~~~vv~~~~-~t~~G~i~d----l~~I~~l~~~~gi~l~vD~a~~~~~~~~~~~~~~~~~~~ 140 (367)
++|++.+++.. .......+|++.-. ....|.+.+ +++|.++|++||+++++|+++.++......+.....++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 56676665321 11122334444432 355566644 89999999999999999998876533222111111234
Q ss_pred CcceeeeccccccccC-CcceeEEEecchhhhhhccCCc---cccccCCCCCCCCCCCchhhhhhcccCCCcchhccCCC
Q psy3048 141 YVDSFAFNAHKWLLTN-HDCSAMWVKNANHLTNTFFTDR---VYLKHTDAPMNTQSPDYTVMNWLGKALGLPEEFLNCSK 216 (367)
Q Consensus 141 ~~D~~~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~---~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (367)
..|+++ .-|.+.+. ..+|+++.+++ .. ..+.... .++..
T Consensus 656 ~PDiit--lsK~L~gG~~Plgav~~~~~-i~-~~~~~~~~~~~~~hg--------------------------------- 698 (831)
T 4a0g_A 656 KPDIAC--FAKLLTGGMVPLAVTLATDA-VF-DSFSGDSKLKALLHG--------------------------------- 698 (831)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEECHH-HH-HTTCSSCGGGSCCCC---------------------------------
T ss_pred CCcEEE--EecccccCccCcEEEEECHH-HH-HHHhcccccccceee---------------------------------
Confidence 358765 56888764 35688887543 22 2111100 00000
Q ss_pred CCCCCccccccccccccccHHHHHHHHHHhhHHHHHHHHHH-HHHH----HHHHHHHhcCCCCeEEeCCCCceeEEEEEc
Q psy3048 217 GPGGGVIQHWQTPLSRRFRALKLWMTLRSYGLKGLQAYLRK-HISL----AKKFADLVEKDDRFELVCPPSMGLVCFRLK 291 (367)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-~~~l----a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~ 291 (367)
++. .+....+.+..++|+.+..+.+.+.+++ ...+ .+.+.+.+++++.+.-+.. .-.++.+.+.
T Consensus 699 ---------~T~-~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg-~Gl~~~iel~ 767 (831)
T 4a0g_A 699 ---------HSY-SAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVV-IGTLFALELK 767 (831)
T ss_dssp ---------CTT-TTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE-ETTEEEEEEC
T ss_pred ---------cCC-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEee-cccEEEEEEe
Confidence 011 1111222334445554433332211100 0111 1223444555555433211 1123334443
Q ss_pred CC-------chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Q psy3048 292 GD-------NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQSSEM 351 (367)
Q Consensus 292 ~~-------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~~~~~ 351 (367)
.. .....++.+++.++|. ++.+. + ..+|+++ ...++++||++++++|+++++++
T Consensus 768 ~~~~~~~~~~~~a~~~~~~l~e~Gv-~v~p~---g-~~lrl~p-p~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 768 ADASNSGYASLYAKSLLIMLREDGI-FTRPL---G-NVIYLMC-GPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ---------CHHHHHHHHHHHHTTE-ECCCB---T-TEEEEEC-CTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cCccccccchHHHHHHHHHHHHCCc-EEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 21 2345678888999984 33322 2 5899964 56678999999999999988765
No 237
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=67.15 E-value=32 Score=30.00 Aligned_cols=61 Identities=16% Similarity=0.070 Sum_probs=42.6
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEE----ecCCCcccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVA----TLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~----~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
.+++++..+++.-...|-..+.++. +. +++.=..-++..|..+.+.+++++++|..|+.+.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~-~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTF-ETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCS-CCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCC-CCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 4899999998766555543445555 22 2333233478899998888899999999998654
No 238
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=62.61 E-value=32 Score=31.85 Aligned_cols=82 Identities=16% Similarity=0.023 Sum_probs=52.1
Q ss_pred chhHHHHHHhCCcceEEEecCCCCC-cCHHHHHHHHHHHhhCCCccEEEEEecCCCccc---ccCChhhHHHHHhhcCcE
Q psy3048 40 NSSVEKSAIIGDVPVRQLRSDDNGV-LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTC---AFDNLEELGPICQEYNIW 115 (367)
Q Consensus 40 H~s~~~~~~~~g~~v~~v~~~~~~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G---~i~dl~~I~~l~~~~gi~ 115 (367)
+..+.+.+.-.|. ++.+. .|. .++++++.+++.-...|-..++++-+..+++.. ..-++..|..+.+.++++
T Consensus 238 n~~LL~~~a~~gk-PVilk---~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lp 313 (385)
T 3nvt_A 238 NFELLKAAGRVDK-PILLK---RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLP 313 (385)
T ss_dssp CHHHHHHHHTSSS-CEEEE---CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSC
T ss_pred CHHHHHHHHccCC-cEEEe---cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCC
Confidence 3444444433443 33343 234 799999999887666554445555542333322 124899999998889999
Q ss_pred EEEecccccc
Q psy3048 116 LHVDAAYAGS 125 (367)
Q Consensus 116 l~vD~a~~~~ 125 (367)
+++|-+|+++
T Consensus 314 V~~D~th~~G 323 (385)
T 3nvt_A 314 VMVDVTHSTG 323 (385)
T ss_dssp EEEEHHHHHC
T ss_pred EEEcCCCCCC
Confidence 9999999865
No 239
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=56.19 E-value=10 Score=34.05 Aligned_cols=62 Identities=19% Similarity=0.101 Sum_probs=42.9
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 83 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVT 83 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4467889999999999888777765555666666666555556666777776653 4666655
No 240
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=55.12 E-value=13 Score=33.25 Aligned_cols=71 Identities=14% Similarity=0.052 Sum_probs=45.9
Q ss_pred hCCcceEE-EecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 49 IGDVPVRQ-LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 49 ~~g~~v~~-v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
+.|+-+-. -|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 16 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaG 90 (304)
T 3l21_A 16 LGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAG 90 (304)
T ss_dssp HCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 44553222 24467899999999999988877765445555555555554556666777766653 5777774
No 241
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.05 E-value=12 Score=33.77 Aligned_cols=62 Identities=11% Similarity=0.058 Sum_probs=41.3
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc--CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY--NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~--gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaG 82 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVG 82 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEe
Confidence 3457789999999999888777665444555555555554556666677766654 5777773
No 242
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.35 E-value=13 Score=33.22 Aligned_cols=61 Identities=8% Similarity=-0.119 Sum_probs=41.9
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 25 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4467889999999999988877765445555555555555556667777777663 467666
No 243
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=53.23 E-value=5.7 Score=37.75 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=27.5
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 457789999999999999999999999985
No 244
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=53.19 E-value=31 Score=30.35 Aligned_cols=63 Identities=19% Similarity=0.129 Sum_probs=42.4
Q ss_pred CC-cCHHHHHHHHHHHhhCCCccEEEEEecCC-Cccc---ccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 63 GV-LRGDALLTAVKEDLAKGLIPCCLVATLGT-TGTC---AFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 63 ~~-~d~~~L~~~l~~~~~~~~~~~~vv~~~~~-t~~G---~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
|. .++++++.+++.-...|-..+.++.- +. ++.+ ..-++..|..+.+.+++++++|..|+.+.
T Consensus 153 G~~~t~~ei~~Ave~i~~~Gn~~i~L~~R-g~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 153 GFGNTVEELLAAAEYILLEGNWQVVLVER-GIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCCCEEEEEC-CBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEEeC-CcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 44 49999999988766555433444331 22 2222 23478888888888899999999998653
No 245
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=53.02 E-value=61 Score=29.54 Aligned_cols=61 Identities=16% Similarity=0.107 Sum_probs=41.5
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCC----CcccccCChhhHHHHHhhcCcEEEEeccccccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGT----TGTCAFDNLEELGPICQEYNIWLHVDAAYAGSA 126 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~----t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~~~ 126 (367)
.++++++.+++.-...|-..+.++. .+. +++=..-++..|..+.+.+++++++|..|+.+.
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viLce-RG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIILCE-RGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEEEE-CCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEe-CCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 4899999998866555533334431 222 222233578899998888899999999998763
No 246
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=53.00 E-value=59 Score=24.53 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHhhCC-----CccEEEEEecCCCcccccCChhhHHHHHhhcCcEE
Q psy3048 66 RGDALLTAVKEDLAKG-----LIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWL 116 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~-----~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l 116 (367)
|++.|.+.|++..++. ..|+++-+..-. ...|+.++.++++++|+.+
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~ 77 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRI 77 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEE
Confidence 8888888887765432 234444333222 2358999999999999865
No 247
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=52.37 E-value=8.8 Score=34.40 Aligned_cols=74 Identities=18% Similarity=0.131 Sum_probs=46.3
Q ss_pred HHHhCCcceEEE-ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 46 SAIIGDVPVRQL-RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 46 ~~~~~g~~v~~v-~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
+..+.|+-+-.+ |.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++-
T Consensus 9 ~~~~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG 86 (303)
T 2wkj_A 9 ATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAH 86 (303)
T ss_dssp GGGGCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 344455432222 446789999999999998877776544455555555554445566667776664 24777764
No 248
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=50.36 E-value=24 Score=29.50 Aligned_cols=47 Identities=17% Similarity=0.141 Sum_probs=34.6
Q ss_pred HHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 71 LTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 71 ~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
|.+++=..-.|..|..|+.....+..|......++.++|++||+.++
T Consensus 147 EAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 147 EAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp HHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 33443333356778777666554778999999999999999999775
No 249
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=49.72 E-value=36 Score=27.15 Aligned_cols=82 Identities=6% Similarity=-0.037 Sum_probs=50.1
Q ss_pred CceEEEecCCcchhH-----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 29 SRLVAYASDQSNSSV-----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~-----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
++.++.+.....+.+ ....+..|.+|+.+.. ...++++.+++.+.. |.+|.++.. .+.....+.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~----~~p~e~lv~aa~~~~-----~diV~lS~~--~~~~~~~~~ 87 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL----RQTPEQVAMAAVQED-----VDVIGVSIL--NGAHLHLMK 87 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS----BCCHHHHHHHHHHTT-----CSEEEEEES--SSCHHHHHH
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC----CCCHHHHHHHHHhcC-----CCEEEEEee--chhhHHHHH
Confidence 455555544444443 2223447888876643 358889888887654 346666643 334567788
Q ss_pred hHHHHHhhcC---cEEEEecc
Q psy3048 104 ELGPICQEYN---IWLHVDAA 121 (367)
Q Consensus 104 ~I~~l~~~~g---i~l~vD~a 121 (367)
++.+.+++.+ +.+++=|+
T Consensus 88 ~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 88 RLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEEeCC
Confidence 8888888754 66776654
No 250
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=49.34 E-value=20 Score=32.03 Aligned_cols=62 Identities=21% Similarity=0.060 Sum_probs=39.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++-
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 91 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG 91 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 345678899999988888777766444445555555544444556666666554 24666654
No 251
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=48.81 E-value=16 Score=33.29 Aligned_cols=62 Identities=18% Similarity=0.050 Sum_probs=39.4
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+-...+++++-
T Consensus 37 PF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaG 98 (344)
T 2hmc_A 37 PCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVG 98 (344)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEe
Confidence 34567899999999998877776655455555555555444455566666533345666654
No 252
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.31 E-value=20 Score=31.77 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=40.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhh-CCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLA-KGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~-~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
|.++++.+|.+.+++.++...+ +|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++-
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 79 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQ 79 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 3456789999999999888777 66544445555555554445566666666654 24666654
No 253
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.92 E-value=17 Score=33.01 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=41.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG 109 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAG 109 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4467899999999999987776664444455555555544455666777766642 4777764
No 254
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=45.56 E-value=56 Score=27.56 Aligned_cols=74 Identities=15% Similarity=0.044 Sum_probs=50.3
Q ss_pred eEEEecCCcchhHHHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 31 LVAYASDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 31 ~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
.++++.++.+..-. ..+.++.+..+++...+.+++++..+.++.-. |..++.+|-.+ .+.+++.+.++
T Consensus 156 ~i~~~GDt~~~~~~--~~l~~~Dv~il~~~~~~h~~~~ea~~~~~~l~-----~k~vip~H~~~-----~~~~~~~~~l~ 223 (235)
T 3kl7_A 156 RVYIAGDTEDIPEM--KDLKDIDIAFLPVNQPYTMTVSQAAKAARMFS-----PKILYPYHYGD-----TKIGELKDALK 223 (235)
T ss_dssp EEEECCSCCSCGGG--GGCCSCSEEEEECCTTTSCCHHHHHHHHHHHC-----CSEEEEESCTT-----CCTTHHHHHTT
T ss_pred EEEEECCCCchhhH--HhhcCCCEEEECCCCCcccCHHHHHHHHHHcC-----CCEEEEEcCCC-----CCHHHHHHHHh
Confidence 45666777766521 22346788888887678899988888776543 34677776544 57888888777
Q ss_pred hcCcEE
Q psy3048 111 EYNIWL 116 (367)
Q Consensus 111 ~~gi~l 116 (367)
+.|+.+
T Consensus 224 ~~gi~v 229 (235)
T 3kl7_A 224 DSGIDV 229 (235)
T ss_dssp TSCCEE
T ss_pred hCCCEE
Confidence 777654
No 255
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=45.50 E-value=1e+02 Score=26.31 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=48.4
Q ss_pred ceEEEecCCcchhH-HHHHHhCCcceEEEecC--------CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccC
Q psy3048 30 RLVAYASDQSNSSV-EKSAIIGDVPVRQLRSD--------DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFD 100 (367)
Q Consensus 30 ~~~v~~s~~~H~s~-~~~~~~~g~~v~~v~~~--------~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~ 100 (367)
..+.++.++.+..- ....+..+..+..++.. ..+.+++++..++++.-. +..++.+|-.+..-.-.
T Consensus 161 ~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~-----~~~vi~~H~~~~~~~~~ 235 (264)
T 3rpc_A 161 PTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKP-----EAKIIAVHMDTVNHTAT 235 (264)
T ss_dssp CCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCT-----TSEEEEESCSSSTTBCS
T ss_pred cEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCC-----cCeEEEEcccccccccc
Confidence 34556666666653 33334456777777764 356788887777775432 34677777654222335
Q ss_pred ChhhHHHHHhhcCc
Q psy3048 101 NLEELGPICQEYNI 114 (367)
Q Consensus 101 dl~~I~~l~~~~gi 114 (367)
+.+++.+.+++.|+
T Consensus 236 ~~~~l~~~~~~~g~ 249 (264)
T 3rpc_A 236 SRKDVRKFIKGNNI 249 (264)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCC
Confidence 77888888777664
No 256
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=45.17 E-value=8.7 Score=34.04 Aligned_cols=60 Identities=10% Similarity=-0.089 Sum_probs=39.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++ -.-++++.+.+..++=..++-.++.+.+.+ .+++++-
T Consensus 9 Pf~~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaG 68 (283)
T 2pcq_A 9 PFDREGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVG 68 (283)
T ss_dssp CBCTTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEe
Confidence 44567899999999998876654 333445555555555455666777777766 6666654
No 257
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=45.14 E-value=8.8 Score=36.34 Aligned_cols=30 Identities=10% Similarity=0.047 Sum_probs=27.1
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456789999999999999999999999985
No 258
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.84 E-value=15 Score=33.00 Aligned_cols=61 Identities=21% Similarity=0.121 Sum_probs=39.0
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 18 PFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp CBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4456788888888888887776665445555555555554555666666666653 356665
No 259
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=43.72 E-value=18 Score=32.11 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=40.3
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 78 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTG 78 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 3457899999999999988777765444455555555544455666777766653 3555543
No 260
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=43.33 E-value=18 Score=32.24 Aligned_cols=61 Identities=11% Similarity=0.118 Sum_probs=37.9
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345678888888888888777666444444455555444444555666666554 2466666
No 261
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=43.29 E-value=27 Score=32.07 Aligned_cols=62 Identities=15% Similarity=-0.003 Sum_probs=42.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++-
T Consensus 70 PF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG 134 (360)
T 4dpp_A 70 PYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGN 134 (360)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 446789999999999999887777554555555555555555566666666554 24777763
No 262
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=43.26 E-value=10 Score=36.25 Aligned_cols=30 Identities=13% Similarity=-0.047 Sum_probs=27.2
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456789999999999999999999999985
No 263
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=42.50 E-value=16 Score=32.30 Aligned_cols=54 Identities=24% Similarity=0.155 Sum_probs=34.5
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~ 63 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYD 63 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 345678899999988888777666444444445454444444556666666665
No 264
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=42.05 E-value=11 Score=35.96 Aligned_cols=30 Identities=17% Similarity=-0.073 Sum_probs=27.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456689999999999999999999999975
No 265
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=41.98 E-value=11 Score=36.00 Aligned_cols=30 Identities=13% Similarity=-0.058 Sum_probs=27.1
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456789999999999999999999999975
No 266
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=41.91 E-value=19 Score=31.96 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=34.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~ 63 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYD 63 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 345678889988888888777666443444444444444444556666666665
No 267
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=41.66 E-value=11 Score=36.35 Aligned_cols=30 Identities=7% Similarity=-0.128 Sum_probs=27.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456679999999999999999999999985
No 268
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=41.32 E-value=12 Score=35.36 Aligned_cols=30 Identities=20% Similarity=0.130 Sum_probs=26.9
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456679999999999999999999999985
No 269
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.05 E-value=17 Score=32.80 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=41.0
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 33 Pf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3467899999999999988877765444555555555544556666677766652 466666
No 270
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=41.02 E-value=11 Score=35.56 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=26.5
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 63 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 63 KAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45679999999999999999999999985
No 271
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=40.83 E-value=80 Score=26.29 Aligned_cols=77 Identities=8% Similarity=-0.018 Sum_probs=48.3
Q ss_pred ceEEEecCCcchhH-HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccc--cCChhhHH
Q psy3048 30 RLVAYASDQSNSSV-EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCA--FDNLEELG 106 (367)
Q Consensus 30 ~~~v~~s~~~H~s~-~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~--i~dl~~I~ 106 (367)
..++++.++.+... .....+.++.+..+++...+.+++++..+.++.-. |..++.+|-.+.... .+|+++..
T Consensus 116 ~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g~~~h~~~~~a~~~~~~~~-----~k~vi~~H~~~~~~~~~~~~~~~~~ 190 (220)
T 1vjn_A 116 IKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVGGTYTIGPKEAKEVADLLN-----AKVIIPMHYKTKYLKFNLLPVDDFL 190 (220)
T ss_dssp EEEEECTTCCSCCCHHHHHHHCCCSEEEEECCSSSSCCHHHHHHHHHHTT-----CSEEEEESCCCSSCCTTCCCTHHHH
T ss_pred eEEEEeCCCCCcchHHHHHhhCCCCEEEEcCCCcCcCCHHHHHHHHHhcC-----CCEEEEEecccccccCCchhHHHHH
Confidence 45677777777653 33333457888888876557789988877776543 346777775553211 24566666
Q ss_pred HHHhh
Q psy3048 107 PICQE 111 (367)
Q Consensus 107 ~l~~~ 111 (367)
+.+++
T Consensus 191 ~~~~~ 195 (220)
T 1vjn_A 191 KLFDS 195 (220)
T ss_dssp TTSSC
T ss_pred HHHHh
Confidence 66654
No 272
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.42 E-value=17 Score=32.23 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=36.7
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 76 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAG 76 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 3356788888888888877666554434444444444444445556666665542 3566544
No 273
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=40.29 E-value=16 Score=32.95 Aligned_cols=62 Identities=10% Similarity=0.035 Sum_probs=34.8
Q ss_pred ecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++ ++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 22 Pf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaG 87 (316)
T 3e96_A 22 PFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAG 87 (316)
T ss_dssp CBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 4456 788888888888877766654333333343433333344555566555442 3566554
No 274
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.97 E-value=18 Score=32.14 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=37.8
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3456788999999888887766554434444444444444445566666665542 466666
No 275
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=39.94 E-value=1.3e+02 Score=24.72 Aligned_cols=82 Identities=16% Similarity=0.055 Sum_probs=52.5
Q ss_pred ceEEEecCCcchhHHH-----HHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhh
Q psy3048 30 RLVAYASDQSNSSVEK-----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEE 104 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~-----~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~ 104 (367)
+.++.+.....+.+-. ..+..|.+|+.+.. ...++++.+++++.. |.+|.++... +.....+.+
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~----~vp~~~l~~~~~~~~-----~d~v~lS~~~--~~~~~~~~~ 158 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV----DIEPGKFVEAVKKYQ-----PDIVGMSALL--TTTMMNMKS 158 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS----SBCHHHHHHHHHHHC-----CSEEEEECCS--GGGTHHHHH
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC----CCCHHHHHHHHHHcC-----CCEEEEeccc--cccHHHHHH
Confidence 4555555544444322 23457899887654 358899988887654 4466666533 335667888
Q ss_pred HHHHHhhcC----cEEEEeccc
Q psy3048 105 LGPICQEYN----IWLHVDAAY 122 (367)
Q Consensus 105 I~~l~~~~g----i~l~vD~a~ 122 (367)
+.+.+++.+ +.+++=|+.
T Consensus 159 ~i~~l~~~~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 159 TIDALIAAGLRDRVKVIVGGAP 180 (210)
T ss_dssp HHHHHHHTTCGGGCEEEEESTT
T ss_pred HHHHHHhcCCCCCCeEEEECCC
Confidence 888888754 788887653
No 276
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=39.88 E-value=17 Score=32.79 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=42.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 35 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG 99 (315)
T 3na8_A 35 PFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVS 99 (315)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4467899999999999998877775545555555555544556666777766652 4666663
No 277
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=39.38 E-value=23 Score=32.26 Aligned_cols=62 Identities=6% Similarity=0.086 Sum_probs=41.2
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 42 PF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG 106 (343)
T 2v9d_A 42 IFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIG 106 (343)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4467899999999999988777765545555555555555555666666666542 4666654
No 278
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=39.17 E-value=14 Score=33.08 Aligned_cols=62 Identities=15% Similarity=0.006 Sum_probs=39.8
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG 87 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAG 87 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeC
Confidence 3457899999999999988777664444454555555444445566666666542 4666654
No 279
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=38.77 E-value=18 Score=32.54 Aligned_cols=58 Identities=9% Similarity=-0.058 Sum_probs=36.9
Q ss_pred CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 61 DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 61 ~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
+++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 25 KTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6788888888888887776665444555555555544455566666665542 356665
No 280
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=38.55 E-value=18 Score=32.25 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=35.2
Q ss_pred CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc----CcEEEEe
Q psy3048 61 DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY----NIWLHVD 119 (367)
Q Consensus 61 ~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~----gi~l~vD 119 (367)
+++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG 83 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG 83 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe
Confidence 4678888888888877766664434444444444444445555666665542 4677663
No 281
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=38.52 E-value=62 Score=27.03 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=35.2
Q ss_pred HHHHHHHHhhCCCccEEEEEec-CCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 70 LLTAVKEDLAKGLIPCCLVATL-GTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 70 L~~~l~~~~~~~~~~~~vv~~~-~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
=|.+++=..-.|..|..|+... ..+..|......++.++|++||+.++
T Consensus 145 TEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 145 TEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp HHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3455554444677787665554 14567999999999999999999875
No 282
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=38.49 E-value=13 Score=35.17 Aligned_cols=30 Identities=10% Similarity=0.112 Sum_probs=26.6
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.+++|..
T Consensus 76 i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 76 INPEYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CCGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 455678889999999999999999999985
No 283
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=38.36 E-value=13 Score=36.10 Aligned_cols=28 Identities=7% Similarity=-0.066 Sum_probs=26.1
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+..|..++++++++-||++|+.|++|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6789999999999999999999999974
No 284
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=37.66 E-value=13 Score=35.33 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=26.9
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 90 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 90 LNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356679999999999999999999999985
No 285
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=37.56 E-value=19 Score=32.41 Aligned_cols=62 Identities=21% Similarity=0.146 Sum_probs=40.8
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG 98 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAG 98 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4467899999999999987776664444455555555544556666677666542 4677763
No 286
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=36.63 E-value=1.4e+02 Score=25.60 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=47.5
Q ss_pred HHHHHHhCCcce-EEEecCCC-------------CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHH
Q psy3048 43 VEKSAIIGDVPV-RQLRSDDN-------------GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPI 108 (367)
Q Consensus 43 ~~~~~~~~g~~v-~~v~~~~~-------------~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l 108 (367)
+.+.++..|.+| ..+|-+.. -.++.+++++.++...++-...+.|.--.|+-.|..-..++.+.+.
T Consensus 44 ~a~~A~~~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm~~ 123 (245)
T 2nly_A 44 QAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEV 123 (245)
T ss_dssp HHHHHHHTTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHH
Confidence 445566678764 33443211 1578899999988766533222333333355555566788999999
Q ss_pred HhhcCcEEEEec
Q psy3048 109 CQEYNIWLHVDA 120 (367)
Q Consensus 109 ~~~~gi~l~vD~ 120 (367)
++++|+ +++|.
T Consensus 124 l~~~gL-~fvDS 134 (245)
T 2nly_A 124 VKEKNA-FIIDS 134 (245)
T ss_dssp HHHTTC-EEEEC
T ss_pred HHHCCC-EEEcC
Confidence 999994 56663
No 287
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=36.62 E-value=14 Score=35.60 Aligned_cols=30 Identities=17% Similarity=0.144 Sum_probs=26.6
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+....|..++++++++-||++|+.|++|..
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345678999999999999999999999985
No 288
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=36.18 E-value=15 Score=35.17 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=26.2
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45678899999999999999999999985
No 289
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=36.16 E-value=13 Score=34.65 Aligned_cols=28 Identities=11% Similarity=-0.053 Sum_probs=25.8
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+..|..++++++++-||++|+.|++|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6678999999999999999999999985
No 290
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=35.97 E-value=14 Score=34.70 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=27.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356689999999999999999999999985
No 291
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=35.50 E-value=13 Score=35.44 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=27.5
Q ss_pred cCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 91 LGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 91 ~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
......|..++++++++-||++|+.|++|..
T Consensus 88 ~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 88 QVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp EECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3456779999999999999999999999985
No 292
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=35.44 E-value=25 Score=31.17 Aligned_cols=60 Identities=13% Similarity=0.037 Sum_probs=34.5
Q ss_pred cCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 59 SDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 59 ~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
.++++ +|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 14 f~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~G 76 (291)
T 3a5f_A 14 FTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAG 76 (291)
T ss_dssp BCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 35567 888888888877666654444444444444444445555666655542 3555543
No 293
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=34.54 E-value=13 Score=35.52 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=26.8
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345679999999999999999999999985
No 294
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=34.38 E-value=14 Score=35.28 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=27.1
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+....|..++++++++-||++|+.|++|..
T Consensus 90 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 90 VNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456679999999999999999999999985
No 295
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=34.28 E-value=18 Score=30.05 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcC--cEEEEeccccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYN--IWLHVDAAYAG 124 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~g--i~l~vD~a~~~ 124 (367)
+.++|+++++...+ .+.+. .|.+..++++++.+|++| +.+|+|-..|.
T Consensus 18 ~~~~l~~al~s~~~------~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 18 NQKDMEKILELDLT------YMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSHHHHHHTTSSCC------EEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred CHHHHHHHHcCCCC------EEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 67889998865432 33333 356678999999999988 45577765543
No 296
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=34.09 E-value=46 Score=30.77 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCC-cccccCChhhHHHHHhhcCcEEEEeccccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTT-GTCAFDNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t-~~G~i~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
+.++.++.|+...+.|+.-++-++-.+.- ..-....+++|.++|+++|.-+++|-+-..
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~ 98 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAV 98 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence 56677778887777776555444433322 223457899999999999999999986543
No 297
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=33.98 E-value=75 Score=26.79 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=33.2
Q ss_pred HHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEE
Q psy3048 71 LTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLH 117 (367)
Q Consensus 71 ~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~ 117 (367)
|.+++=..-.|..|..|+.... +..|......++.++|++||+.++
T Consensus 155 EAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 155 EATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp HHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 4444433345777876665544 567999999999999999999765
No 298
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.28 E-value=15 Score=35.13 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=27.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 95 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 95 VDPMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp ECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 456679999999999999999999999985
No 299
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=32.97 E-value=66 Score=26.79 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=19.9
Q ss_pred cCChhhHHHHHhhcCcEEEEec-ccccc
Q psy3048 99 FDNLEELGPICQEYNIWLHVDA-AYAGS 125 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~-a~~~~ 125 (367)
+.+..++.++|++||+++++.. ||...
T Consensus 146 ~~~~~~il~l~k~~g~~ivisSDAh~~~ 173 (212)
T 1v77_A 146 LRFMMKAWKLVEKYKVRRFLTSSAQEKW 173 (212)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSSGG
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCChh
Confidence 5666788888888888888774 56543
No 300
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=32.82 E-value=25 Score=31.55 Aligned_cols=62 Identities=10% Similarity=-0.008 Sum_probs=34.9
Q ss_pred ec-CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh---cCcEEEEe
Q psy3048 58 RS-DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE---YNIWLHVD 119 (367)
Q Consensus 58 ~~-~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~---~gi~l~vD 119 (367)
|. ++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+ ..+++++-
T Consensus 22 PF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (314)
T 3d0c_A 22 PFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAG 87 (314)
T ss_dssp CBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred cccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEec
Confidence 44 5678888888888887766665333333334444433333455555555553 24666653
No 301
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=32.78 E-value=15 Score=36.02 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=26.0
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 86 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 86 MKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678889999999999999999999985
No 302
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=32.43 E-value=12 Score=34.98 Aligned_cols=29 Identities=24% Similarity=0.270 Sum_probs=26.3
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+...|..++++++++-||++|+.|++|..
T Consensus 68 ~~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 68 NRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp ETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45579999999999999999999999985
No 303
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.16 E-value=16 Score=35.64 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=26.3
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 73 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 73 MKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678899999999999999999999985
No 304
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=31.81 E-value=20 Score=35.40 Aligned_cols=30 Identities=20% Similarity=0.029 Sum_probs=26.4
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+..|..++++++++-||++|+.|++|..
T Consensus 201 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 201 VRTKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp SSBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345678889999999999999999999985
No 305
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=31.66 E-value=19 Score=35.34 Aligned_cols=29 Identities=28% Similarity=0.426 Sum_probs=25.1
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
...|..++++++++-||++|+.|++|...
T Consensus 213 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 213 PQFGDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp TTTCCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 44577789999999999999999999853
No 306
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=31.51 E-value=18 Score=32.32 Aligned_cols=61 Identities=13% Similarity=0.093 Sum_probs=37.9
Q ss_pred ecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 58 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 58 ~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
|.++++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++
T Consensus 15 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 15 PVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4467788999999998887776664444444444444444445556666665542 355555
No 307
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=31.48 E-value=18 Score=35.28 Aligned_cols=30 Identities=20% Similarity=0.132 Sum_probs=26.9
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 71 id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 71 IMNEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 356679999999999999999999999985
No 308
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=31.47 E-value=17 Score=35.68 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=25.9
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
....|..++++++++-||++|+.|++|...
T Consensus 216 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 216 DPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345678899999999999999999999853
No 309
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=31.17 E-value=50 Score=30.36 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCc-ccccCChhhHHHHHhhcCcEEEEecccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTG-TCAFDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~-~G~i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
+.++.++.|+...+.|+.-++-++-.+.-. .-....+.+|.++|+++|.-+++|-+..
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 345556777777777766555555444322 2344789999999999999999997643
No 310
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=31.03 E-value=59 Score=28.70 Aligned_cols=57 Identities=9% Similarity=-0.056 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhc-CcEEEEecccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEY-NIWLHVDAAYA 123 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~-gi~l~vD~a~~ 123 (367)
.++++++.+++.-.+.|-..++++-. .+.++.- -|+..|..+.+.+ |+++++|..|+
T Consensus 145 ~t~~ei~~ave~i~~~Gn~~i~L~er--g~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 145 MSPTQLKHVVSKCGEVGNDRVMLCER--GSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHS 205 (285)
T ss_dssp SCGGGTHHHHHHHHHTTCCCEEEEEC--CEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTT
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeC--CCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCc
Confidence 57777777776554444333333332 2223433 3789998888877 79999999987
No 311
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=30.76 E-value=45 Score=29.03 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=18.9
Q ss_pred cCChhhHHHHHhhcCcEEEEec
Q psy3048 99 FDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
...++.+.++|+++|+.+++|-
T Consensus 89 ~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 89 LDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEe
Confidence 3557899999999999998885
No 312
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=30.70 E-value=17 Score=35.67 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=25.5
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 213 d~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 213 DPQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 34567888999999999999999999985
No 313
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=30.37 E-value=20 Score=36.02 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=26.0
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 109 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 109 NPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45678889999999999999999999985
No 314
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=30.32 E-value=21 Score=35.22 Aligned_cols=28 Identities=11% Similarity=0.073 Sum_probs=24.9
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
...|..++++++++-||++|+.|++|..
T Consensus 193 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 193 PRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 4467788999999999999999999985
No 315
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=30.32 E-value=1.3e+02 Score=20.46 Aligned_cols=56 Identities=7% Similarity=0.096 Sum_probs=32.1
Q ss_pred cccCceEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEE
Q psy3048 26 DIKSRLVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCC 86 (367)
Q Consensus 26 ~~~~~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~ 86 (367)
++++..++|......++. .......|+++..++.+. + +.+.+.+.+.......|.+
T Consensus 3 ~~m~~v~ly~~~~C~~C~~~~~~L~~~~i~~~~~di~~----~-~~~~~~l~~~~~~~~vP~l 60 (92)
T 2khp_A 3 GSMVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASA----T-PELRAEMQERSGRNTFPQI 60 (92)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHTTCCCEEEESTT----S-HHHHHHHHHHHTSSCCCEE
T ss_pred CCcccEEEEECCCChhHHHHHHHHHHcCCCcEEEECCC----C-HHHHHHHHHHhCCCCcCEE
Confidence 345678888877776663 223344688888888763 2 2333334333334455743
No 316
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=30.18 E-value=20 Score=35.00 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=26.3
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 72 d~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 72 MDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678899999999999999999999985
No 317
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=30.10 E-value=20 Score=35.92 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=26.1
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 105 dp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 105 NPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45678899999999999999999999985
No 318
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=29.95 E-value=19 Score=35.02 Aligned_cols=29 Identities=10% Similarity=0.051 Sum_probs=26.3
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 72 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 72 ADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45678899999999999999999999985
No 319
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=29.89 E-value=21 Score=35.92 Aligned_cols=30 Identities=13% Similarity=0.030 Sum_probs=27.0
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 100 idp~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 100 IEEHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 356679999999999999999999999985
No 320
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=29.85 E-value=1.3e+02 Score=20.35 Aligned_cols=55 Identities=7% Similarity=0.097 Sum_probs=30.9
Q ss_pred cccCceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHh-hCCCccEEE
Q psy3048 26 DIKSRLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL-AKGLIPCCL 87 (367)
Q Consensus 26 ~~~~~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~-~~~~~~~~v 87 (367)
++++..++|......++.. ......|+++..++.+ ++..+.+.+.. .....|.++
T Consensus 3 ~mm~~v~~y~~~~C~~C~~~~~~L~~~~i~~~~vdv~-------~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 3 GSMKEIILYTRPNCPYCKRARDLLDKKGVKYTDIDAS-------TSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp CCCCCEEEESCSCCTTTHHHHHHHHHHTCCEEEECSC-------HHHHHHHHHHHHSSCCSCEEE
T ss_pred CCcceEEEEECCCChhHHHHHHHHHHcCCCcEEEECC-------HHHHHHHHHHhCCCCCcCEEE
Confidence 4556788888777776642 2233457777777653 33333443333 344567654
No 321
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=29.31 E-value=91 Score=26.45 Aligned_cols=47 Identities=11% Similarity=0.013 Sum_probs=34.2
Q ss_pred HHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEE
Q psy3048 71 LTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHV 118 (367)
Q Consensus 71 ~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~v 118 (367)
|..++=..-.|..|..|+.... +..|......++.++|++||+.++-
T Consensus 166 EaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 166 EMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4444433446777876665554 5569999999999999999998753
No 322
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=28.89 E-value=49 Score=22.70 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=33.8
Q ss_pred chHHHHHHHHHhccCcEEEEEeEECCeeEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy3048 294 NDLTNQLYERLMSHKQIYIIKASFQGRPFLRFVVTSPETNQCDVAFAWNEISHQ 347 (367)
Q Consensus 294 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~~~edid~li~~l~~~ 347 (367)
...++.+.++|...|.- .... .+..+.|+-+ .++.+.++.+.+.+.|++.
T Consensus 20 ~~~A~~l~~~L~~~G~~--a~i~-~~~~~yRV~v-Gpf~s~~~A~~~~~~L~~~ 69 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFD--SKIT-TNNGWNRVVI-GPVKGKENADSTLNRLKMA 69 (81)
T ss_dssp HHHHHHHHHHHHHHTCC--EEEE-ECSSSEEEEE-SSCBTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC--eEEE-eCCcEEEEEE-CCcCCHHHHHHHHHHHHHc
Confidence 34567888888887721 1111 2445678744 6888899999998888874
No 323
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=28.85 E-value=22 Score=35.69 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=26.0
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 110 dp~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 110 NPYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45678889999999999999999999985
No 324
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.61 E-value=28 Score=30.78 Aligned_cols=58 Identities=14% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 75 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAG 75 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 567777777777766655553333344444444433334445555554431 3555543
No 325
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=28.58 E-value=1.5e+02 Score=20.51 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=39.2
Q ss_pred CceEEEecCCcchhH-----HHHH---HhCCcceEEEecCCCCCcCHHHHHHHHHHHhh--CCCccEEEEEecCCCcccc
Q psy3048 29 SRLVAYASDQSNSSV-----EKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLA--KGLIPCCLVATLGTTGTCA 98 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~-----~~~~---~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~--~~~~~~~vv~~~~~t~~G~ 98 (367)
+..+||++...+++- .++- ...|++..+++.+. +. +..+.+.+... ....|.++ ..+ ...|.
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~----~~-~~~~~l~~~~g~~~~~vP~if--i~g-~~igG 73 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQ----DN-ALRDEMRTLAGNPKATPPQIV--NGN-HYCGD 73 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTS----CH-HHHHHHHHHTTCTTCCSCEEE--ETT-EEEEE
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCC----CH-HHHHHHHHHhCCCCCCCCEEE--ECC-EEEeC
Confidence 367889888888872 2332 34688888888864 33 44445555443 23556543 333 34565
Q ss_pred cCChhhH
Q psy3048 99 FDNLEEL 105 (367)
Q Consensus 99 i~dl~~I 105 (367)
.+++.++
T Consensus 74 ~d~l~~l 80 (93)
T 1t1v_A 74 YELFVEA 80 (93)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 326
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=28.40 E-value=22 Score=35.43 Aligned_cols=30 Identities=10% Similarity=0.038 Sum_probs=26.4
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+....|..++++++++-||++|+.|++|..
T Consensus 278 idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 278 VARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp ECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 345678889999999999999999999985
No 327
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=28.10 E-value=23 Score=34.81 Aligned_cols=29 Identities=7% Similarity=-0.110 Sum_probs=26.0
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 81 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 81 WPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45678889999999999999999999985
No 328
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=27.98 E-value=2.9e+02 Score=23.80 Aligned_cols=54 Identities=13% Similarity=0.004 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEe
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVD 119 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD 119 (367)
++.+++++.++...++-...+.|.--.|+-.|..-..++.+.+.++++|++++ |
T Consensus 107 ~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~Fl-D 160 (261)
T 2qv5_A 107 DPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFL-D 160 (261)
T ss_dssp SCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEE-E
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCCEEE-c
Confidence 78899999998776543222233333344455555778899999999986544 5
No 329
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.49 E-value=30 Score=30.67 Aligned_cols=58 Identities=17% Similarity=0.181 Sum_probs=30.4
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 75 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAG 75 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 577777777777776665553333343444444333334445555554431 3555543
No 330
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=27.42 E-value=23 Score=35.12 Aligned_cols=30 Identities=20% Similarity=0.082 Sum_probs=26.7
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 155 vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 155 VNPALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp BCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 455678899999999999999999999985
No 331
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=27.36 E-value=23 Score=35.36 Aligned_cols=30 Identities=23% Similarity=0.108 Sum_probs=26.5
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 148 vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 148 VEPSLGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp BCGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345678889999999999999999999985
No 332
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=27.32 E-value=29 Score=30.64 Aligned_cols=50 Identities=20% Similarity=0.199 Sum_probs=29.1
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhh
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQE 111 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~ 111 (367)
++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~ 62 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATS 62 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 67788888888777666655433344444444444444455566665554
No 333
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=27.07 E-value=25 Score=35.42 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=26.0
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 305 dp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 305 DKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 45678889999999999999999999985
No 334
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=26.95 E-value=27 Score=35.15 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.6
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecccc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
...|..++++++++-||++|+.|++|.+..
T Consensus 315 p~~Gt~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 315 PALGTLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 345777899999999999999999998753
No 335
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=26.91 E-value=65 Score=28.54 Aligned_cols=56 Identities=9% Similarity=-0.150 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhc-CcEEEEecccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEY-NIWLHVDAAYA 123 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~-gi~l~vD~a~~ 123 (367)
++++++.+++.-...|-..+.++... +++ +.- .++..|..+.+.+ ++++.+|..|+
T Consensus 144 t~~ei~~Av~~i~~~Gn~~i~L~~rg-~~~-~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 203 (292)
T 1o60_A 144 SPSQMGNIVEKIEECGNDKIILCDRG-TNF-GYDNLIVDMLGFSVMKKASKGSPVIFDVTHS 203 (292)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECC-EEC-STTCEECCTTHHHHHHHHTTSCCEEEEHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECC-CCC-CCCccccCHHHHHHHHhhCCCCCEEEECCCc
Confidence 67778777765444443334444432 222 332 4889998887777 89999999987
No 336
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=26.68 E-value=1.8e+02 Score=20.99 Aligned_cols=72 Identities=17% Similarity=0.100 Sum_probs=42.8
Q ss_pred CceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 29 SRLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+..+||+.....++.. ......|++...++++.. -+.+++.+.+.+.+.....|.+++ .+ ...|..+++.++
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~--~~~~~~~~~l~~~~g~~tvP~vfi--~g-~~igG~d~l~~l 90 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQV--DDGARVQEVLSEITNQKTVPNIFV--NK-VHVGGCDQTFQA 90 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTS--TTHHHHHHHHHHHHSCCSSCEEEE--TT-EEEESHHHHHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCCCcEEEEecCC--CChHHHHHHHHHHhCCCccCEEEE--CC-EEEeCHHHHHHH
Confidence 3678888776666632 223346888888887632 255677777766555555665543 33 345655555544
No 337
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=26.68 E-value=23 Score=35.02 Aligned_cols=29 Identities=10% Similarity=0.055 Sum_probs=25.7
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....|..++++++++-||++|+.|++|..
T Consensus 186 ~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 186 YAPYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45568889999999999999999999975
No 338
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=26.51 E-value=23 Score=35.09 Aligned_cols=28 Identities=7% Similarity=-0.041 Sum_probs=24.6
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
...|..++++++++-||++|+.|++|..
T Consensus 199 ~~~Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 199 RRFGTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp GGGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4457788999999999999999999975
No 339
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=26.13 E-value=69 Score=28.14 Aligned_cols=56 Identities=13% Similarity=-0.034 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhc-CcEEEEecccc
Q psy3048 66 RGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEY-NIWLHVDAAYA 123 (367)
Q Consensus 66 d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~-gi~l~vD~a~~ 123 (367)
++++++.+++.-...|-..+.++.... ++ +.- -++..|..+.+.+ ++++.+|..|+
T Consensus 141 t~~e~~~A~~~i~~~Gn~~i~L~~rg~-~~-~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 200 (280)
T 2qkf_A 141 SPSQMKNIVEKFHEAGNGKLILCERGS-SF-GYDNLVVDMLGFGVMKQTCGNLPVIFDVTHS 200 (280)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCE-EC-STTCEECCTTHHHHHHHHTTTCCEEEEHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCC-CC-CCCccccCHHHHHHHHHhCCCCCEEEECCCC
Confidence 666777777654444432333433322 22 332 3788888887777 89999998887
No 340
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=25.88 E-value=1.7e+02 Score=20.50 Aligned_cols=56 Identities=7% Similarity=0.083 Sum_probs=34.5
Q ss_pred cCceEEEecCCcchhH--HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEE
Q psy3048 28 KSRLVAYASDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL 87 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~--~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~v 87 (367)
....+||+....-++. .+.....|++..+++.+. |++..+...+...-+...|.++
T Consensus 3 ta~I~vYs~~~Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~ 60 (92)
T 2lqo_A 3 TAALTIYTTSWCGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVK 60 (92)
T ss_dssp SSCEEEEECTTCSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEE
T ss_pred CCcEEEEcCCCCHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEE
Confidence 3468888888777774 233445799999998864 5665555443322233456544
No 341
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=25.69 E-value=1.9e+02 Score=20.77 Aligned_cols=63 Identities=16% Similarity=-0.021 Sum_probs=38.7
Q ss_pred eEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh----hHHHHHhhcCcEE-EEeccc
Q psy3048 54 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE----ELGPICQEYNIWL-HVDAAY 122 (367)
Q Consensus 54 v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~----~I~~l~~~~gi~l-~vD~a~ 122 (367)
+..|+ ..+..-+.+.|++.+++.. +..+++-.|-++.|...+.. +.++..++.++++ ++|+-+
T Consensus 28 l~ti~-~~~~~~~~~~l~~li~e~~-----v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERl 95 (98)
T 1iv0_A 28 RGYLV-RKTLEEDVEALLDFVRREG-----LGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERF 95 (98)
T ss_dssp EEEEE-CCCHHHHHHHHHHHHHHHT-----CCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSC
T ss_pred eEEEE-ccCcHHHHHHHHHHHHHcC-----CCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 34444 2344557788888888764 45788888888888876543 3333222226655 677654
No 342
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=25.63 E-value=22 Score=34.68 Aligned_cols=30 Identities=10% Similarity=0.133 Sum_probs=26.1
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
++..|..++++++++-||++|+.|++|...
T Consensus 161 ~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 161 QNSYGGPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp CGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 455678899999999999999999999853
No 343
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=25.25 E-value=32 Score=30.68 Aligned_cols=58 Identities=26% Similarity=0.234 Sum_probs=34.8
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEEe
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHVD 119 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~vD 119 (367)
++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.+. .+++++-
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVG 87 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 688888888888877766664444444454444444445556666665542 3555544
No 344
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=25.18 E-value=35 Score=24.04 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=18.0
Q ss_pred hhhHHHHHhhcCcEEEEecc
Q psy3048 102 LEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a 121 (367)
-.+|.++|+++|++++-|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 58899999999999999964
No 345
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=24.84 E-value=87 Score=20.66 Aligned_cols=49 Identities=10% Similarity=-0.012 Sum_probs=29.6
Q ss_pred CCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcCc
Q psy3048 63 GVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYNI 114 (367)
Q Consensus 63 ~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi 114 (367)
-.++.++|++.++...+....+.+++-.....++| .+-++.+.|++.|+
T Consensus 25 ~~v~~~~L~~~l~~~~~~~~~~~V~I~aD~~~~y~---~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 25 EGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYE---EVIKALNLLHLAGI 73 (74)
T ss_dssp EEECHHHHHHHHHHHHHHCTTCCEEEEECTTSCHH---HHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHHhhCCCceEEEEcCCCCCHH---HHHHHHHHHHHcCC
Confidence 45688889888876543322233444444455555 45677777887765
No 346
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=24.54 E-value=1e+02 Score=23.85 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=39.3
Q ss_pred CCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHH-----HHhhcCcEE-EEecccc
Q psy3048 62 NGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGP-----ICQEYNIWL-HVDAAYA 123 (367)
Q Consensus 62 ~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~-----l~~~~gi~l-~vD~a~~ 123 (367)
+...+.+.|++.+++.. +..+|+-.|-++.|...|..+-++ +.+++++++ ++|+-++
T Consensus 37 ~~~~~~~~l~~li~e~~-----v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 37 DGTPDWNIIERLLKEWQ-----PDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp TTEECHHHHHHHHHHHC-----CSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred CcchHHHHHHHHHHHcC-----CCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 45568999999998864 457888888888888766544332 333467654 7887654
No 347
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=24.26 E-value=28 Score=34.51 Aligned_cols=30 Identities=10% Similarity=0.167 Sum_probs=26.2
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
++..|..++++++++-||++|+.|++|...
T Consensus 196 ~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~ 225 (618)
T 3m07_A 196 HSAYGTPDDFKAFIDAAHGYGLSVVLDIVL 225 (618)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEeecC
Confidence 455688889999999999999999999854
No 348
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=24.21 E-value=32 Score=35.52 Aligned_cols=28 Identities=14% Similarity=-0.028 Sum_probs=25.7
Q ss_pred CcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
+..|..++++++++-||++|+.|++|-.
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 5678899999999999999999999965
No 349
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=23.76 E-value=88 Score=27.77 Aligned_cols=56 Identities=9% Similarity=-0.052 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhcCcEEEEecccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYA 123 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~gi~l~vD~a~~ 123 (367)
.++++++.+++.-.+.|-..++++-. .+.++.- -|+..|..+.+ +++++++|..|+
T Consensus 166 ~t~~ei~~ave~i~~~Gn~~iiL~er--g~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHs 224 (298)
T 3fs2_A 166 LAPWDMKNVLAKITESGNPNVLATER--GVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHS 224 (298)
T ss_dssp CCGGGHHHHHHHHHTTTCCCEEEEEC--CEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEEC--CCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCc
Confidence 57777877776655444333333332 2222332 37888888776 899999998886
No 350
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=23.75 E-value=95 Score=27.06 Aligned_cols=56 Identities=16% Similarity=-0.133 Sum_probs=33.2
Q ss_pred cCHHHHHHHHHHHhhCCCccEEEEEecCCCccccc---CChhhHHHHHhhcCcEEEEeccccc
Q psy3048 65 LRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAG 124 (367)
Q Consensus 65 ~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i---~dl~~I~~l~~~~gi~l~vD~a~~~ 124 (367)
.+++++..+++.-...|-.-+.++.... ++ +.- -|+..|..+.+. + ++++|.+|+.
T Consensus 129 ~t~~e~~~Av~~i~~~GN~~i~L~~rG~-~~-~y~~~~~dl~~i~~lk~~-~-pVivD~sH~~ 187 (267)
T 2nwr_A 129 LAPWDTKNVVEKLKFGGAKEIYLTERGT-TF-GYNNLVVDFRSLPIMKQW-A-KVIYDATHSV 187 (267)
T ss_dssp CCGGGGHHHHHHHHHTTCSSEEEEECCE-EC-SSSCEECCTTHHHHHTTT-S-EEEEETTGGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCC-CC-CCCccccCHHHHHHHHHc-C-CEEEcCCccc
Confidence 4666777776654444432334444322 22 322 478888877655 6 9999999973
No 351
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=23.72 E-value=1.8e+02 Score=24.12 Aligned_cols=84 Identities=7% Similarity=0.020 Sum_probs=51.6
Q ss_pred CceEEEecCCcchhH-----HHHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChh
Q psy3048 29 SRLVAYASDQSNSSV-----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLE 103 (367)
Q Consensus 29 ~~~~v~~s~~~H~s~-----~~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~ 103 (367)
++.++.+.......+ ....+..|.+|+.+-.+ +.++++.+++.+.. |.+|.++.....+.....+.
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~----vp~e~iv~~~~~~~-----~d~v~l~~S~l~~~~~~~~~ 163 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD----VLNENVVEEAAKHK-----GEKVLLVGSALMTTSMLGQK 163 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS----CCHHHHHHHHHHTT-----TSCEEEEEECSSHHHHTHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC----CCHHHHHHHHHHcC-----CCEEEEEchhcccCcHHHHH
Confidence 455555555444443 22344579998876543 57888877776654 34565621133345566789
Q ss_pred hHHHHHhhcC----cEEEEecc
Q psy3048 104 ELGPICQEYN----IWLHVDAA 121 (367)
Q Consensus 104 ~I~~l~~~~g----i~l~vD~a 121 (367)
++.+.+++.+ +.+++=|+
T Consensus 164 ~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 164 DLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp HHHHHHHHTTCGGGSEEEEESS
T ss_pred HHHHHHHHcCCCCCCEEEEECC
Confidence 9999888864 57777654
No 352
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=23.57 E-value=81 Score=27.06 Aligned_cols=36 Identities=22% Similarity=0.147 Sum_probs=27.7
Q ss_pred cEEEEEecCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 84 PCCLVATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 84 ~~~vv~~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..+|++|-|.+..|. +|+ +.+++++++|+.+++=|.
T Consensus 11 k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 11 RQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred cEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 468999999887785 555 667889999998776544
No 353
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=22.88 E-value=32 Score=34.34 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=28.2
Q ss_pred ecCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 90 TLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 90 ~~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
....+..|..++++++++-||++|+.|++|..
T Consensus 151 ~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 151 RAVRPDLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp EEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCccCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 33467789999999999999999999999975
No 354
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=22.72 E-value=30 Score=34.99 Aligned_cols=30 Identities=20% Similarity=0.056 Sum_probs=25.7
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
++..|..++++++++-||++|+-|++|...
T Consensus 306 ~~~yGt~~dfk~lV~~~H~~GI~VilD~V~ 335 (722)
T 3k1d_A 306 TSRFGTPDDFRALVDALHQAGIGVIVDWVP 335 (722)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEEEe
Confidence 345677799999999999999999999853
No 355
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=22.21 E-value=1.9e+02 Score=19.56 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=40.3
Q ss_pred cCceEEEecCCcchhHH--HHHHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhH
Q psy3048 28 KSRLVAYASDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEEL 105 (367)
Q Consensus 28 ~~~~~v~~s~~~H~s~~--~~~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I 105 (367)
+...++|......++.. ......|++...++.+..-.-+-.++...+.+.......|.+++ .+.. .|.. +-++|
T Consensus 11 M~~v~ly~~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~-i~G~-~~~~l 86 (92)
T 3ic4_A 11 MAEVLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH-VLGY-NEEKL 86 (92)
T ss_dssp CSSSEEEECTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE-EESC-CHHHH
T ss_pred CceEEEEECCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE-EeCC-CHHHH
Confidence 35688898877777643 23344688888887752100011122233333333456676654 3333 3333 55666
Q ss_pred HHHH
Q psy3048 106 GPIC 109 (367)
Q Consensus 106 ~~l~ 109 (367)
.++.
T Consensus 87 ~~~l 90 (92)
T 3ic4_A 87 KELI 90 (92)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 356
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=22.18 E-value=35 Score=34.77 Aligned_cols=30 Identities=10% Similarity=0.128 Sum_probs=25.9
Q ss_pred CCcccccCChhhHHHHHhhcCcEEEEeccc
Q psy3048 93 TTGTCAFDNLEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 93 ~t~~G~i~dl~~I~~l~~~~gi~l~vD~a~ 122 (367)
++..|..++++++++-||++|+.|++|..+
T Consensus 244 ~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 273 (755)
T 3aml_A 244 SSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 273 (755)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445678899999999999999999999853
No 357
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=22.18 E-value=37 Score=34.03 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=26.1
Q ss_pred CCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 92 GTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 92 ~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
.....|..++++++++-||++|+.|++|..
T Consensus 99 i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 99 VNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 345568889999999999999999999975
No 358
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.03 E-value=36 Score=30.21 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=22.2
Q ss_pred CCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHh
Q psy3048 61 DNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQ 110 (367)
Q Consensus 61 ~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~ 110 (367)
+++.+|.+.+++.++...++|-.-++++.+.+..++=..++-.++.+.+.
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~ 63 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVA 63 (297)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHH
Confidence 34566666666666555544433223333333333323333444444433
No 359
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=20.64 E-value=45 Score=33.63 Aligned_cols=31 Identities=6% Similarity=-0.104 Sum_probs=27.4
Q ss_pred cCCCcccccCChhhHHHHHhhcCcEEEEecc
Q psy3048 91 LGTTGTCAFDNLEELGPICQEYNIWLHVDAA 121 (367)
Q Consensus 91 ~~~t~~G~i~dl~~I~~l~~~~gi~l~vD~a 121 (367)
..++..|..++++++++-||++|+.+++|..
T Consensus 57 ~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 57 RINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp EECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3456678999999999999999999999985
No 360
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=20.64 E-value=2e+02 Score=21.82 Aligned_cols=64 Identities=14% Similarity=0.038 Sum_probs=40.1
Q ss_pred HHhCCcceEEEecCCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhcC---cEEEEecc
Q psy3048 47 AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEYN---IWLHVDAA 121 (367)
Q Consensus 47 ~~~~g~~v~~v~~~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~g---i~l~vD~a 121 (367)
.+..|.+|+.+-.+ ..++++.++..+.. |.+|.++... +.....+.++.+..++.| +.+++=|+
T Consensus 27 l~~~G~~Vi~lG~~----~p~e~~v~~a~~~~-----~d~v~lS~~~--~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 27 FTNAGFNVVNIGVL----SPQELFIKAAIETK-----ADAILVSSLY--GQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHTTCEEEEEEEE----ECHHHHHHHHHHHT-----CSEEEEEECS--STHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHhcC-----CCEEEEEecC--cCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 34579999877542 57888888887654 3355555433 223345777777777653 66666554
No 361
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.61 E-value=46 Score=24.22 Aligned_cols=21 Identities=5% Similarity=0.131 Sum_probs=18.2
Q ss_pred hhhHHHHHhhcCcEEEEeccc
Q psy3048 102 LEELGPICQEYNIWLHVDAAY 122 (367)
Q Consensus 102 l~~I~~l~~~~gi~l~vD~a~ 122 (367)
-.+|.++|+++|++++-|-..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 478999999999999999643
No 362
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=20.34 E-value=33 Score=34.04 Aligned_cols=28 Identities=14% Similarity=0.037 Sum_probs=25.0
Q ss_pred CcccccCChhhHHHHHhhcC--c--EEEEecc
Q psy3048 94 TGTCAFDNLEELGPICQEYN--I--WLHVDAA 121 (367)
Q Consensus 94 t~~G~i~dl~~I~~l~~~~g--i--~l~vD~a 121 (367)
...|..++++++++-||++| + .|++|..
T Consensus 233 ~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V 264 (637)
T 1ji1_A 233 PAFGDNSTLQTLINDIHSTANGPKGYLILDGV 264 (637)
T ss_dssp TTTCCHHHHHHHHHHHHCSSSSSCCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhCCCCccceEEEEEC
Confidence 45677899999999999999 9 9999985
No 363
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=20.32 E-value=2e+02 Score=24.91 Aligned_cols=22 Identities=14% Similarity=0.093 Sum_probs=19.3
Q ss_pred cCChhhHHHHHhhcCcEEEEec
Q psy3048 99 FDNLEELGPICQEYNIWLHVDA 120 (367)
Q Consensus 99 i~dl~~I~~l~~~~gi~l~vD~ 120 (367)
...++++.+.|+++|+.+++|-
T Consensus 100 ~~~~d~~~~~a~~~gi~v~~~~ 121 (387)
T 4awe_A 100 VSPFDKVVDSATKTGIKLIVAL 121 (387)
T ss_dssp CGGGHHHHHHHHHHTCEEEEEC
T ss_pred hhhHHHHHHHHHHcCCEEEEee
Confidence 4568999999999999999885
No 364
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=20.15 E-value=47 Score=29.33 Aligned_cols=58 Identities=16% Similarity=0.041 Sum_probs=30.1
Q ss_pred CCCCCcCHHHHHHHHHHHhhCCCccEEEEEecCCCcccccCChhhHHHHHhhc---CcEEEE
Q psy3048 60 DDNGVLRGDALLTAVKEDLAKGLIPCCLVATLGTTGTCAFDNLEELGPICQEY---NIWLHV 118 (367)
Q Consensus 60 ~~~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~t~~G~i~dl~~I~~l~~~~---gi~l~v 118 (367)
+++ .+|.+.+++.++...++|-.-+++..+.+..++=..++-.++.+.+.+. .+++++
T Consensus 16 ~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 16 TNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp ETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345 7777777777766665554333344444444333344445555554442 355554
No 365
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.02 E-value=1.7e+02 Score=22.49 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=44.7
Q ss_pred ceEEEecCCcchhHHHHHHhCCcceEEEecCC-CCCcCHHHHHHHHHHHhhCCCccEEEEEecCC--Ccccc-cCChhhH
Q psy3048 30 RLVAYASDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLVATLGT--TGTCA-FDNLEEL 105 (367)
Q Consensus 30 ~~~v~~s~~~H~s~~~~~~~~g~~v~~v~~~~-~~~~d~~~L~~~l~~~~~~~~~~~~vv~~~~~--t~~G~-i~dl~~I 105 (367)
.+.++.+..+..-+.+ ..|+++..|..-. +| + ..+.+.|.+.. +-++++.+. . ... ..|...|
T Consensus 31 Gf~l~AT~gTa~~L~e---~~Gl~v~~v~k~~~eG--~-p~I~d~I~~ge------IdlVInt~~pl~-~~~h~~D~~~I 97 (134)
T 2xw6_A 31 RFPLVATGTTGRRIEE---ATGLTVEKLLSGPLGG--D-QQMGARVAEGR------ILAVIFFRDPLT-AQPHEPDVQAL 97 (134)
T ss_dssp TSCEEECHHHHHHHHH---HHCCCCEECSCGGGTH--H-HHHHHHHHTTC------EEEEEEECCTTT-CCTTSCCSHHH
T ss_pred CCEEEEccHHHHHHHH---hhCceEEEEEecCCCC--c-chHHHHHHCCC------ccEEEEccCccc-CCCccchHHHH
Confidence 3455555433322222 1588888875322 33 2 24565665443 233334333 3 233 5789999
Q ss_pred HHHHhhcCcEEEEec
Q psy3048 106 GPICQEYNIWLHVDA 120 (367)
Q Consensus 106 ~~l~~~~gi~l~vD~ 120 (367)
.+.|-.|++++...-
T Consensus 98 rR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 98 LRVCDVHGVPLATNP 112 (134)
T ss_dssp HHHHHHHTCCEECSH
T ss_pred HHHHHHcCCCeEcCH
Confidence 999999999987654
Done!