Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy3058
MSTYRLNSLSSSFTAEAFAMEMCLDNLINRPIPDNILIFTDSKSLISSMQQLFCKNILIH
DIQVACHKLILKGNNVKIIWIPSHCGIAGNEEVDKAAQSFINAQNYSLITHVDLKAFLKN
EFKKKWQIWWDNIQPPNKIKDTVKEWQTSNRNSRKEEIILSRLRIGHTRLTHGFLMERTD
PPQCEVCNVTITVKHILCHCTKYTQIRLKYNLNNLQIKDILGDNPRTIDLLFRFLKDSNL
LPKL

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy3058
        (244 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...   133  3.4e-06   1


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 50/216 (23%), Positives = 97/216 (44%)

Query:     8 SLSSSFTAEAFAMEMCLDNLINRPIPDNILIFTDSKSLISSMQQLFCKN--ILIHDIQVA 65
             S S+ + AE   + + L  ++ R +  + +IFTD+++ + +++    ++   ++  I +A
Sbjct:   217 SESTVYVAELQGILLALVIILQRQM-QHAVIFTDNQATLQALRNPGSQSGQYILEAIIMA 275

Query:    66 CHKLILKGNNVKIIWIPSHCGIAGNEEVDKAAQSF-----INAQNYSLITHVDLKAFLKN 120
              +K    G NV   WIP+H G+ GNE+ D+ A+       I      +     +K     
Sbjct:   276 LNKGRKAGLNVHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRGRMTIRSAVKRRAHE 335

Query:   121 EFKKKWQIWWDNIQPPNKIKD-----TVKEWQTSNRNSRKEEIILSRLRIGHTRLTHGFL 175
                 +W+  W +     ++ +     T K  +      R    I+ ++R G   L H +L
Sbjct:   336 VVNARWENDWKSCHHGRELYELTPTPTRKVLRVHQDLHRALSTIIVQMRTGKIGLRH-YL 394

Query:   176 MER--TDPPQ--CEVCNVTITVKHILCHCTKYTQIR 207
              +R   D P   C+    T +V+HIL  C  ++ +R
Sbjct:   395 YQRGVPDVPNSDCQCGRATQSVRHILLACPTFSGLR 430


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      244       244   0.00098  113 3  11 22  0.39    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.64u 0.09s 21.73t   Elapsed:  00:00:12
  Total cpu time:  21.64u 0.09s 21.73t   Elapsed:  00:00:13
  Start:  Thu Aug 15 14:35:16 2013   End:  Thu Aug 15 14:35:29 2013

Back to top