BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3064
(61 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|219522040|ref|NP_001137201.1| mex-3 protein [Tribolium castaneum]
gi|218464687|emb|CAM28380.2| KH domain protein [Tribolium castaneum]
Length = 428
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+ SEPD+P L +P + S +++R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 53 LTAVSEPDAPADL--APFVGSLATVGLDEVRSKKSQNMTECVPVPSSEHVAEIVGRQG 108
>gi|270002843|gb|EEZ99290.1| hypothetical protein TcasGA2_TC001207 [Tribolium castaneum]
Length = 410
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+ SEPD+P L +P + S +++R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 35 LTAVSEPDAPADL--APFVGSLATVGLDEVRSKKSQNMTECVPVPSSEHVAEIVGRQG 90
>gi|195469381|ref|XP_002099616.1| GE14558 [Drosophila yakuba]
gi|194185717|gb|EDW99328.1| GE14558 [Drosophila yakuba]
Length = 607
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 1 MNLSSEPDSPLGLNGSPH---LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQ 57
M+ S+ DS L + +P+ LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQ
Sbjct: 63 MHTFSKVDSTLPIQSAPNCLLLPTAGAASSED-RSKKSQNMTECVPVPSSEHVAEIVGRQ 121
Query: 58 G 58
G
Sbjct: 122 G 122
>gi|242017156|ref|XP_002429058.1| hypothetical protein Phum_PHUM418080 [Pediculus humanus corporis]
gi|212513913|gb|EEB16320.1| hypothetical protein Phum_PHUM418080 [Pediculus humanus corporis]
Length = 114
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 22 FLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQGF 59
F E++RNK+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 FASSIIEEVRNKRSQNMTECVPVPSSEHVAEIVGRQGL 97
>gi|194913504|ref|XP_001982712.1| GG16398 [Drosophila erecta]
gi|190647928|gb|EDV45231.1| GG16398 [Drosophila erecta]
Length = 634
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 1 MNLSSEPDSPLGLNGSPH---LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQ 57
M+ S+ DS L + +P+ LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQ
Sbjct: 90 MHSFSKADSTLPIPSAPNCLLLPTAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQ 148
Query: 58 G 58
G
Sbjct: 149 G 149
>gi|260829805|ref|XP_002609852.1| hypothetical protein BRAFLDRAFT_126022 [Branchiostoma floridae]
gi|229295214|gb|EEN65862.1| hypothetical protein BRAFLDRAFT_126022 [Branchiostoma floridae]
Length = 488
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 29/30 (96%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
D RN+KS+NMTECVPVPSSEHVAEIVGRQG
Sbjct: 58 DARNRKSSNMTECVPVPSSEHVAEIVGRQG 87
>gi|258676577|gb|ACV87296.1| PEM-3 KH domain protein [Phallusia mammillata]
Length = 579
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E ++NKKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 54 EAMKNKKSQNMTECVPVPSSEHVAEIVGRQG 84
>gi|322797028|gb|EFZ19342.1| hypothetical protein SINV_11103 [Solenopsis invicta]
Length = 100
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
Query: 14 NGSPHLPSFLQESA---EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
NG+ + P LQ + E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 53 NGANNDPDPLQAAPAVFEEARSKKSQNMTECVPVPSSEHVAEIVGRQG 100
>gi|328719242|ref|XP_001943718.2| PREDICTED: RNA-binding protein MEX3B-like [Acyrthosiphon pisum]
Length = 404
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ RNKKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 74 EEPRNKKSQNMTECVPVPSSEHVAEIVGRQG 104
>gi|195354415|ref|XP_002043693.1| GM26809 [Drosophila sechellia]
gi|194128881|gb|EDW50924.1| GM26809 [Drosophila sechellia]
Length = 627
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 104 LPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 142
>gi|195564308|ref|XP_002105763.1| GD24410 [Drosophila simulans]
gi|194201638|gb|EDX15214.1| GD24410 [Drosophila simulans]
Length = 627
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 104 LPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 142
>gi|62484332|ref|NP_651934.2| CG11360, isoform A [Drosophila melanogaster]
gi|442614454|ref|NP_001259068.1| CG11360, isoform C [Drosophila melanogaster]
gi|442614456|ref|NP_001259069.1| CG11360, isoform D [Drosophila melanogaster]
gi|442614458|ref|NP_001259070.1| CG11360, isoform E [Drosophila melanogaster]
gi|61677927|gb|AAF59320.2| CG11360, isoform A [Drosophila melanogaster]
gi|353440928|gb|AEQ94063.1| LD09246p1 [Drosophila melanogaster]
gi|440218157|gb|AGB96558.1| CG11360, isoform C [Drosophila melanogaster]
gi|440218158|gb|AGB96559.1| CG11360, isoform D [Drosophila melanogaster]
gi|440218159|gb|AGB96560.1| CG11360, isoform E [Drosophila melanogaster]
Length = 628
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 105 LPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 143
>gi|41616110|tpg|DAA03149.1| TPA_inf: HDC16721 [Drosophila melanogaster]
Length = 190
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 149 LPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 187
>gi|66771361|gb|AAY54992.1| IP11918p [Drosophila melanogaster]
Length = 657
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 134 LPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 172
>gi|405957283|gb|EKC23507.1| RNA-binding protein MEX3C [Crassostrea gigas]
Length = 538
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 9 SPLGLNGSPHLPSFLQESAE-DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
S L +NG +P+ + + + K+SANMTECVPVPSSEHVAEIVGRQG
Sbjct: 39 SVLRMNGDEEVPNLASSTMDSETARKRSANMTECVPVPSSEHVAEIVGRQG 89
>gi|194746791|ref|XP_001953457.1| GF20555 [Drosophila ananassae]
gi|190629353|gb|EDV44770.1| GF20555 [Drosophila ananassae]
Length = 320
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 10 PLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
PL NG LP+ D R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 94 PLSHNGL-LLPNTAIAVCVDDRSKKSQNMTECVPVPSSEHVAEIVGRQG 141
>gi|115918119|ref|XP_786425.2| PREDICTED: RNA-binding protein MEX3B-like [Strongylocentrotus
purpuratus]
Length = 491
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 26 SAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
SA D R +KS+NMTECVPVPSSEHVAEIVGRQG
Sbjct: 43 SALDDRGRKSSNMTECVPVPSSEHVAEIVGRQG 75
>gi|307214953|gb|EFN89798.1| RNA-binding protein MEX3B [Harpegnathos saltator]
Length = 242
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 14 NGSPHLPSFLQESA----EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
NG + P LQ + E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 47 NGVANDPDPLQTAPTNVFEEARSKKSQNMTECVPVPSSEHVAEIVGRQG 95
>gi|307173518|gb|EFN64428.1| RNA-binding protein MEX3B [Camponotus floridanus]
Length = 131
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
Query: 14 NGSPHLPSFLQES---AEDLRNKKSANMTECVPVPSSEHVAEIVGRQ 57
NG+ + P LQ + E+ R+KKS NMTECVPVPSSEHVAEIVGRQ
Sbjct: 53 NGTTNDPDPLQTTPAVFEEARSKKSQNMTECVPVPSSEHVAEIVGRQ 99
>gi|291221475|ref|XP_002730746.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 508
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 41/66 (62%), Gaps = 17/66 (25%)
Query: 1 MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRN--------KKSANMTECVPVPSSEHVAE 52
+ L+ + +S LGLNGS + ED R KKS NMTECVPVPSSEHVAE
Sbjct: 19 LQLAIDLNSVLGLNGS---------NGEDERTSFSDAEKAKKSVNMTECVPVPSSEHVAE 69
Query: 53 IVGRQG 58
IVGRQG
Sbjct: 70 IVGRQG 75
>gi|85838460|gb|ABC86136.1| RING finger- and KH domain-containing protein [Paracentrotus
lividus]
Length = 491
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 26 SAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
SA D R +KS+NMTECVPVPSSEHVAEIVGRQG
Sbjct: 42 SALDDRGRKSSNMTECVPVPSSEHVAEIVGRQG 74
>gi|198414760|ref|XP_002126902.1| PREDICTED: similar to PEM-3 [Ciona intestinalis]
Length = 479
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 35/50 (70%)
Query: 9 SPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
S LGL G+ S E +NK+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 30 SNLGLLGNCDDDSSTSSYDEITKNKRSQNMTECVPVPSSEHVAEIVGRQG 79
>gi|198461921|ref|XP_001352270.2| GA10947 [Drosophila pseudoobscura pseudoobscura]
gi|198142444|gb|EAL29292.2| GA10947 [Drosophila pseudoobscura pseudoobscura]
Length = 648
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 110 LPTAAAVGVED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 148
>gi|195172570|ref|XP_002027070.1| GL18139 [Drosophila persimilis]
gi|194112848|gb|EDW34891.1| GL18139 [Drosophila persimilis]
Length = 648
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 19 LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
LP+ ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 110 LPTAAAVGVED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 148
>gi|345483953|ref|XP_001604798.2| PREDICTED: RNA-binding protein MEX3B-like [Nasonia vitripennis]
Length = 444
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 80 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 110
>gi|66510891|ref|XP_623265.1| PREDICTED: RNA-binding protein MEX3B-like isoform 2 [Apis
mellifera]
Length = 425
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 101
>gi|380020079|ref|XP_003693924.1| PREDICTED: RNA-binding protein MEX3B-like [Apis florea]
Length = 425
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 101
>gi|350414446|ref|XP_003490320.1| PREDICTED: RNA-binding protein MEX3B-like [Bombus impatiens]
Length = 425
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 101
>gi|340715365|ref|XP_003396185.1| PREDICTED: RNA-binding protein MEX3B-like [Bombus terrestris]
Length = 425
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 101
>gi|383860805|ref|XP_003705879.1| PREDICTED: RNA-binding protein MEX3B-like [Megachile rotundata]
Length = 418
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E+ R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 EEARSKKSQNMTECVPVPSSEHVAEIVGRQG 101
>gi|427787229|gb|JAA59066.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 346
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
D RNKKS N TECVPVPSSEHVAEIVGRQG
Sbjct: 47 DTRNKKSQNTTECVPVPSSEHVAEIVGRQG 76
>gi|332022799|gb|EGI63072.1| RNA-binding protein MEX3B [Acromyrmex echinatior]
Length = 266
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQGF 59
E+ R+KKS NMTECVPVPSSEHVAEIVGRQ F
Sbjct: 70 EEARSKKSQNMTECVPVPSSEHVAEIVGRQVF 101
>gi|9558483|dbj|BAB03404.1| PEM-3 [Ciona savignyi]
Length = 465
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 35/50 (70%)
Query: 9 SPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
S LGL G+ S E ++KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 32 SNLGLLGNCDDDSSTSSYDEITKSKKSQNMTECVPVPSSEHVAEIVGRQG 81
>gi|449683502|ref|XP_002168292.2| PREDICTED: RNA-binding protein MEX3B-like [Hydra magnipapillata]
Length = 639
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/30 (86%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
D+R KKS N TECVPVPSSEHVAEIVGRQG
Sbjct: 112 DMRTKKSMNTTECVPVPSSEHVAEIVGRQG 141
>gi|357612526|gb|EHJ68045.1| hypothetical protein KGM_00893 [Danaus plexippus]
Length = 93
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
D R KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 52 DDRAKKSQNMTECVPVPSSEHVAEIVGRQG 81
>gi|195064313|ref|XP_001996542.1| GH23938 [Drosophila grimshawi]
gi|193892088|gb|EDV90954.1| GH23938 [Drosophila grimshawi]
Length = 666
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 115 RSKKSQNMTECVPVPSSEHVAEIVGRQG 142
>gi|263359674|gb|ACY70510.1| hypothetical protein DVIR88_6g0047 [Drosophila virilis]
Length = 680
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 124 RSKKSQNMTECVPVPSSEHVAEIVGRQG 151
>gi|195402293|ref|XP_002059741.1| GJ18673 [Drosophila virilis]
gi|194155955|gb|EDW71139.1| GJ18673 [Drosophila virilis]
Length = 646
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 90 RSKKSQNMTECVPVPSSEHVAEIVGRQG 117
>gi|195450751|ref|XP_002072617.1| GK13594 [Drosophila willistoni]
gi|194168702|gb|EDW83603.1| GK13594 [Drosophila willistoni]
Length = 685
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 109 RSKKSQNMTECVPVPSSEHVAEIVGRQG 136
>gi|195133944|ref|XP_002011398.1| GI14064 [Drosophila mojavensis]
gi|193912021|gb|EDW10888.1| GI14064 [Drosophila mojavensis]
Length = 138
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQGFGM 61
R+KKS NMTECVPVPSSEHVAEIVGRQ +
Sbjct: 108 RSKKSQNMTECVPVPSSEHVAEIVGRQALKL 138
>gi|22759735|dbj|BAC10968.1| PEM-3 [Halocynthia roretzi]
Length = 574
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 28 EDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E ++KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 52 EITKSKKSQNMTECVPVPSSEHVAEIVGRQG 82
>gi|292611232|ref|XP_002661028.1| PREDICTED: hypothetical protein LOC100331115 [Danio rerio]
Length = 160
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Query: 17 PHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
PH S L E + LR K+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 113 PH-SSILGEQSSVLR-KRSVNMTECVPVPSSEHVAEIVGRQG 152
>gi|395831630|ref|XP_003788898.1| PREDICTED: RNA-binding protein MEX3D, partial [Otolemur
garnettii]
Length = 555
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 20 PSFLQESAEDL-RNKKSANMTECVPVPSSEHVAEIVGRQG 58
P+ L E + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 43 PTLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 82
>gi|74207940|dbj|BAE29094.1| unnamed protein product [Mus musculus]
Length = 427
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 121 RKKSVNMTECVPVPSSEHVAEIVGRQG 147
>gi|77819804|gb|ABB04032.1| ring finger and KH domain containing 1 protein variant 2 [Homo
sapiens]
Length = 130
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 50 RKKSVNMTECVPVPSSEHVAEIVGRQG 76
>gi|449266721|gb|EMC77738.1| RNA-binding protein MEX3B [Columba livia]
Length = 86
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 KKSVNMTECVPVPSSEHVAEIVGRQG 85
>gi|395502340|ref|XP_003755539.1| PREDICTED: RNA-binding protein MEX3B-like [Sarcophilus harrisii]
Length = 506
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 74 RKKSVNMTECVPVPSSEHVAEIVGRQG 100
>gi|291410455|ref|XP_002721509.1| PREDICTED: mex-3 homolog B [Oryctolagus cuniculus]
Length = 585
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 1 MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+ L+ + S LGL+ P + E KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 41 LQLALDQLSLLGLDSDEGAPLYDSEP-----RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|77819802|gb|ABB04031.1| ring finger and KH domain containing 1 protein variant 1 [Homo
sapiens]
Length = 165
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 63 RKKSVNMTECVPVPSSEHVAEIVGRQG 89
>gi|301605370|ref|XP_002932296.1| PREDICTED: RNA-binding protein MEX3B-like [Xenopus (Silurana)
tropicalis]
Length = 518
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 54 KKSVNMTECVPVPSSEHVAEIVGRQG 79
>gi|293348488|ref|XP_001076492.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3D [Rattus
norvegicus]
Length = 672
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 181 RKKSVNMTECVPVPSSEHVAEIVGRQG 207
>gi|392349235|ref|XP_234921.5| PREDICTED: RNA-binding protein MEX3D [Rattus norvegicus]
Length = 769
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 278 RKKSVNMTECVPVPSSEHVAEIVGRQG 304
>gi|350580794|ref|XP_003123061.3| PREDICTED: RNA-binding protein MEX3D [Sus scrofa]
Length = 630
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 20 PSFLQESAEDL-RNKKSANMTECVPVPSSEHVAEIVGRQG 58
P+ L E + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 136 PTLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 175
>gi|145651818|ref|NP_941017.2| RNA-binding protein MEX3D [Mus musculus]
Length = 718
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 228 RKKSVNMTECVPVPSSEHVAEIVGRQG 254
>gi|354480950|ref|XP_003502666.1| PREDICTED: RNA-binding protein MEX3D-like, partial [Cricetulus
griseus]
Length = 604
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 115 RKKSVNMTECVPVPSSEHVAEIVGRQG 141
>gi|301767410|ref|XP_002919134.1| PREDICTED: RNA-binding protein MEX3B-like [Ailuropoda melanoleuca]
Length = 594
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 119 RKKSVNMTECVPVPSSEHVAEIVGRQG 145
>gi|291621664|ref|NP_001167589.1| RNA-binding protein MEX3D isoform 2 [Homo sapiens]
Length = 666
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 173 RKKSVNMTECVPVPSSEHVAEIVGRQG 199
>gi|165905613|ref|NP_976049.3| RNA-binding protein MEX3D isoform 1 [Homo sapiens]
gi|134047829|sp|Q86XN8.3|MEX3D_HUMAN RecName: Full=RNA-binding protein MEX3D; AltName: Full=RING finger
and KH domain-containing protein 1; AltName: Full=RING
finger protein 193; AltName: Full=TINO
gi|63146650|gb|AAY34148.1| MEX3D [Homo sapiens]
Length = 651
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 173 RKKSVNMTECVPVPSSEHVAEIVGRQG 199
>gi|344243407|gb|EGV99510.1| RNA-binding protein MEX3D [Cricetulus griseus]
Length = 598
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 109 RKKSVNMTECVPVPSSEHVAEIVGRQG 135
>gi|321472497|gb|EFX83467.1| hypothetical protein DAPPUDRAFT_47975 [Daphnia pulex]
Length = 180
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 6 KKSQNMTECVPVPSSEHVAEIVGRQG 31
>gi|395750111|ref|XP_002828432.2| PREDICTED: RNA-binding protein MEX3D, partial [Pongo abelii]
Length = 569
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 78 RKKSVNMTECVPVPSSEHVAEIVGRQG 104
>gi|332851046|ref|XP_524036.3| PREDICTED: RNA-binding protein MEX3D, partial [Pan troglodytes]
Length = 545
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 54 RKKSVNMTECVPVPSSEHVAEIVGRQG 80
>gi|124430528|ref|NP_001074462.1| RNA-binding protein MEX3B [Danio rerio]
gi|124297228|gb|AAI31872.1| Zgc:158350 [Danio rerio]
Length = 537
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 53 KKSVNMTECVPVPSSEHVAEIVGRQG 78
>gi|426386515|ref|XP_004059729.1| PREDICTED: RNA-binding protein MEX3D, partial [Gorilla gorilla
gorilla]
Length = 498
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 28 RKKSVNMTECVPVPSSEHVAEIVGRQG 54
>gi|29539551|dbj|BAC67658.1| KIAA2031 protein [Homo sapiens]
Length = 515
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 37 RKKSVNMTECVPVPSSEHVAEIVGRQG 63
>gi|426380078|ref|XP_004056710.1| PREDICTED: RNA-binding protein MEX3B [Gorilla gorilla gorilla]
Length = 973
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 464 RKKSVNMTECVPVPSSEHVAEIVGRQG 490
>gi|134034170|sp|Q3UE17.2|MEX3D_MOUSE RecName: Full=RNA-binding protein MEX3D; AltName: Full=RING finger
and KH domain-containing protein 1
Length = 643
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 154 RKKSVNMTECVPVPSSEHVAEIVGRQG 180
>gi|441656811|ref|XP_004093031.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3D,
partial [Nomascus leucogenys]
Length = 436
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 73 RKKSVNMTECVPVPSSEHVAEIVGRQG 99
>gi|50511245|dbj|BAD32608.1| mKIAA2009 protein [Mus musculus]
Length = 702
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 168 RKKSVNMTECVPVPSSEHVAEIVGRQG 194
>gi|397488612|ref|XP_003815352.1| PREDICTED: RNA-binding protein MEX3B [Pan paniscus]
Length = 706
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 197 RKKSVNMTECVPVPSSEHVAEIVGRQG 223
>gi|334326730|ref|XP_001370901.2| PREDICTED: RNA-binding protein MEX3D-like [Monodelphis domestica]
Length = 812
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 350 RKKSVNMTECVPVPSSEHVAEIVGRQG 376
>gi|300798392|ref|NP_001178555.1| RNA-binding protein MEX3B [Rattus norvegicus]
Length = 576
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|281354589|gb|EFB30173.1| hypothetical protein PANDA_007712 [Ailuropoda melanoleuca]
Length = 501
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 38 RKKSVNMTECVPVPSSEHVAEIVGRQG 64
>gi|117644854|emb|CAL37893.1| hypothetical protein [synthetic construct]
Length = 569
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 RKKSVNMTECVPVPSSEHVAEIVGRQG 86
>gi|71052146|gb|AAH36211.1| MEX3B protein [Homo sapiens]
Length = 569
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 RKKSVNMTECVPVPSSEHVAEIVGRQG 86
>gi|390464276|ref|XP_003733196.1| PREDICTED: RNA-binding protein MEX3B isoform 2 [Callithrix
jacchus]
Length = 597
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|117646414|emb|CAL38674.1| hypothetical protein [synthetic construct]
Length = 569
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 RKKSVNMTECVPVPSSEHVAEIVGRQG 86
>gi|226531159|ref|NP_780575.2| RNA-binding protein MEX3B [Mus musculus]
Length = 576
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|344284314|ref|XP_003413913.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3B-like
[Loxodonta africana]
Length = 575
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|296204212|ref|XP_002749237.1| PREDICTED: RNA-binding protein MEX3B isoform 1 [Callithrix
jacchus]
Length = 572
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|126253681|sp|Q69Z36.2|MEX3B_MOUSE RecName: Full=RNA-binding protein MEX3B; AltName: Full=RING
finger and KH domain-containing protein 3
Length = 601
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|431920288|gb|ELK18323.1| RNA-binding protein MEX3B, partial [Pteropus alecto]
Length = 489
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 47 RKKSVNMTECVPVPSSEHVAEIVGRQG 73
>gi|114658524|ref|XP_523137.2| PREDICTED: RNA-binding protein MEX3B isoform 2 [Pan troglodytes]
gi|410305640|gb|JAA31420.1| mex-3 homolog B [Pan troglodytes]
Length = 572
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 63 RKKSVNMTECVPVPSSEHVAEIVGRQG 89
>gi|47716512|ref|NP_115622.2| RNA-binding protein MEX3B [Homo sapiens]
gi|74762391|sp|Q6ZN04.1|MEX3B_HUMAN RecName: Full=RNA-binding protein MEX3B; AltName: Full=RING
finger and KH domain-containing protein 3; AltName:
Full=RING finger protein 195
gi|47077365|dbj|BAD18571.1| unnamed protein product [Homo sapiens]
gi|63146646|gb|AAY34146.1| MEX3B [Homo sapiens]
gi|84105524|gb|AAI11546.1| Mex-3 homolog B (C. elegans) [Homo sapiens]
gi|119619496|gb|EAW99090.1| ring finger and KH domain containing 3 [Homo sapiens]
gi|168275592|dbj|BAG10516.1| RNA-binding protein MEX3B [synthetic construct]
Length = 569
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 RKKSVNMTECVPVPSSEHVAEIVGRQG 86
>gi|402875094|ref|XP_003901353.1| PREDICTED: RNA-binding protein MEX3B [Papio anubis]
Length = 567
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 59 RKKSVNMTECVPVPSSEHVAEIVGRQG 85
>gi|109082143|ref|XP_001110186.1| PREDICTED: RNA-binding protein MEX3B-like [Macaca mulatta]
Length = 570
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 62 RKKSVNMTECVPVPSSEHVAEIVGRQG 88
>gi|410933267|ref|XP_003980013.1| PREDICTED: RNA-binding protein MEX3B-like [Takifugu rubripes]
Length = 530
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Query: 23 LQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L +++++ R KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 41 LYDNSQEPR-KKSVNMTECVPVPSSEHVAEIVGRQG 75
>gi|297697301|ref|XP_002825799.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3B [Pongo
abelii]
Length = 571
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 63 RKKSVNMTECVPVPSSEHVAEIVGRQG 89
>gi|410960437|ref|XP_003986796.1| PREDICTED: RNA-binding protein MEX3B isoform 1 [Felis catus]
Length = 576
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 69 RKKSVNMTECVPVPSSEHVAEIVGRQG 95
>gi|395822672|ref|XP_003784637.1| PREDICTED: RNA-binding protein MEX3B [Otolemur garnettii]
Length = 577
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 70 RKKSVNMTECVPVPSSEHVAEIVGRQG 96
>gi|410960439|ref|XP_003986797.1| PREDICTED: RNA-binding protein MEX3B isoform 2 [Felis catus]
Length = 601
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 69 RKKSVNMTECVPVPSSEHVAEIVGRQG 95
>gi|194676729|ref|XP_001790292.1| PREDICTED: RNA-binding protein MEX3B [Bos taurus]
Length = 588
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 68 RKKSVNMTECVPVPSSEHVAEIVGRQG 94
>gi|348580041|ref|XP_003475787.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3B-like
[Cavia porcellus]
Length = 576
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 RKKSVNMTECVPVPSSEHVAEIVGRQG 97
>gi|194206214|ref|XP_001915985.1| PREDICTED: RNA-binding protein MEX3B [Equus caballus]
Length = 574
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 66 RKKSVNMTECVPVPSSEHVAEIVGRQG 92
>gi|444730324|gb|ELW70711.1| RNA-binding protein MEX3B [Tupaia chinensis]
Length = 570
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 71 RKKSVNMTECVPVPSSEHVAEIVGRQG 97
>gi|426248746|ref|XP_004018120.1| PREDICTED: RNA-binding protein MEX3B [Ovis aries]
Length = 496
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 143 RKKSVNMTECVPVPSSEHVAEIVGRQG 169
>gi|355692939|gb|EHH27542.1| RING finger and KH domain-containing protein 3, partial [Macaca
mulatta]
Length = 519
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 11 RKKSVNMTECVPVPSSEHVAEIVGRQG 37
>gi|403258564|ref|XP_003921827.1| PREDICTED: RNA-binding protein MEX3B, partial [Saimiri
boliviensis boliviensis]
Length = 520
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 12 RKKSVNMTECVPVPSSEHVAEIVGRQG 38
>gi|334314354|ref|XP_003340029.1| PREDICTED: RNA-binding protein MEX3B isoform 2 [Monodelphis
domestica]
Length = 572
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQG 93
>gi|126273621|ref|XP_001362773.1| PREDICTED: RNA-binding protein MEX3B isoform 1 [Monodelphis
domestica]
Length = 565
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 60 RKKSVNMTECVPVPSSEHVAEIVGRQG 86
>gi|395513239|ref|XP_003760835.1| PREDICTED: RNA-binding protein MEX3D [Sarcophilus harrisii]
Length = 374
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 80 RKKSVNMTECVPVPSSEHVAEIVGRQG 106
>gi|119589889|gb|EAW69483.1| ring finger and KH domain containing 1 [Homo sapiens]
Length = 208
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 8 KKSVNMTECVPVPSSEHVAEIVGRQG 33
>gi|156358413|ref|XP_001624514.1| predicted protein [Nematostella vectensis]
gi|156211299|gb|EDO32414.1| predicted protein [Nematostella vectensis]
Length = 210
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 1 KKSMNMTECVPVPSSEHVAEIVGRQG 26
>gi|348500922|ref|XP_003438020.1| PREDICTED: RNA-binding protein MEX3D-like [Oreochromis niloticus]
Length = 643
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
K+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 133 KRSVNMTECVPVPSSEHVAEIVGRQG 158
>gi|410924445|ref|XP_003975692.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like
[Takifugu rubripes]
Length = 576
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
K+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 66 RKRSVNMTECVPVPSSEHVAEIVGRQG 92
>gi|432916707|ref|XP_004079354.1| PREDICTED: RNA-binding protein MEX3D-like [Oryzias latipes]
Length = 584
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
K+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 142 RKRSVNMTECVPVPSSEHVAEIVGRQG 168
>gi|47228348|emb|CAG07743.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
K+S NMTECVPVPSSEHVAEIVGRQG
Sbjct: 131 RKRSVNMTECVPVPSSEHVAEIVGRQG 157
>gi|126307817|ref|XP_001374543.1| PREDICTED: RNA-binding protein MEX3A [Monodelphis domestica]
Length = 527
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 15 GSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
G L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 111 GDAKLCALYKEA--ELRLKSSSNTTECVPVPTSEHVAEIVGRQG 152
>gi|359077725|ref|XP_003587606.1| PREDICTED: RNA-binding protein MEX3B-like [Bos taurus]
Length = 150
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQ 57
KKS NMTECVPVPSSEHVAEIVGRQ
Sbjct: 67 RKKSVNMTECVPVPSSEHVAEIVGRQ 92
>gi|444719051|gb|ELW59851.1| RNA-binding protein MEX3A [Tupaia chinensis]
Length = 499
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G + + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 98 PTAPKGASDA-KLCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 146
>gi|301783135|ref|XP_002926983.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3A-like
[Ailuropoda melanoleuca]
Length = 464
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G + + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 51 PTAPKGASDA-KLCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 99
>gi|157742899|gb|AAI53821.1| Unknown (protein for IMAGE:40089563) [Homo sapiens]
Length = 246
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 62 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 94
>gi|440913183|gb|ELR62665.1| RNA-binding protein MEX3B, partial [Bos grunniens mutus]
Length = 437
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 30 KKSVNMTECVPVPSSEHVAEIVGRQG 55
>gi|74227420|dbj|BAE21783.1| unnamed protein product [Mus musculus]
Length = 337
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 213 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 245
>gi|395823130|ref|XP_003784849.1| PREDICTED: RNA-binding protein MEX3C [Otolemur garnettii]
Length = 788
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 349 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 381
>gi|348579813|ref|XP_003475673.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3A-like
[Cavia porcellus]
Length = 518
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 122 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 151
>gi|348576856|ref|XP_003474201.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3C-like,
partial [Cavia porcellus]
Length = 610
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 171 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 203
>gi|158508713|ref|NP_001034303.3| RNA-binding E3 ubiquitin-protein ligase MEX3C [Mus musculus]
gi|134047828|sp|Q05A36.2|MEX3C_MOUSE RecName: Full=RNA-binding E3 ubiquitin-protein ligase MEX3C;
AltName: Full=RING finger and KH domain-containing
protein 2
Length = 652
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 213 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 245
>gi|114673181|ref|XP_001155789.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C isoform
1 [Pan troglodytes]
gi|403268073|ref|XP_003926111.1| PREDICTED: RNA-binding protein MEX3C [Saimiri boliviensis
boliviensis]
gi|148922375|gb|AAI46417.1| Mex-3 homolog C (C. elegans) [synthetic construct]
gi|151556594|gb|AAI48856.1| Mex-3 homolog C (C. elegans) [synthetic construct]
gi|193788333|dbj|BAG53227.1| unnamed protein product [Homo sapiens]
gi|208966768|dbj|BAG73398.1| mex-3 homolog C [synthetic construct]
Length = 464
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 25 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 57
>gi|157817352|ref|NP_001100847.1| RNA-binding protein MEX3C [Rattus norvegicus]
gi|149064591|gb|EDM14794.1| ring finger and KH domain containing 2 (predicted) [Rattus
norvegicus]
Length = 464
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 25 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 57
>gi|116138500|gb|AAI25428.1| Mex3 homolog C (C. elegans) [Mus musculus]
gi|378741715|tpd|FAA00737.1| TPA: mex3 homolog C [Mus musculus]
Length = 464
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 25 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 57
>gi|296222677|ref|XP_002757290.1| PREDICTED: RNA-binding protein MEX3C [Callithrix jacchus]
Length = 464
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 25 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 57
>gi|148677615|gb|EDL09562.1| mCG51389 [Mus musculus]
Length = 463
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 24 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 56
>gi|441603544|ref|XP_004093041.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding E3 ubiquitin-protein
ligase MEX3C [Nomascus leucogenys]
Length = 537
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 98 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 130
>gi|301762822|ref|XP_002916836.1| PREDICTED: RNA-binding protein MEX3C-like, partial [Ailuropoda
melanoleuca]
Length = 447
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 8 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 40
>gi|296473796|tpg|DAA15911.1| TPA: mex-3 homolog C [Bos taurus]
Length = 516
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 77 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 109
>gi|291394389|ref|XP_002713526.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 687
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 248 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 280
>gi|281342227|gb|EFB17811.1| hypothetical protein PANDA_004945 [Ailuropoda melanoleuca]
Length = 444
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 5 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 37
>gi|358418730|ref|XP_607763.5| PREDICTED: RNA-binding protein MEX3C [Bos taurus]
gi|359079313|ref|XP_002697870.2| PREDICTED: RNA-binding protein MEX3C [Bos taurus]
Length = 466
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 27 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 59
>gi|431896186|gb|ELK05602.1| RNA-binding protein MEX3C [Pteropus alecto]
Length = 571
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 132 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 164
>gi|297275316|ref|XP_001096989.2| PREDICTED: RNA-binding protein MEX3C-like isoform 2 [Macaca
mulatta]
Length = 701
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 262 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 294
>gi|354481596|ref|XP_003502987.1| PREDICTED: RNA-binding protein MEX3A-like [Cricetulus griseus]
Length = 442
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Query: 17 PHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 35 PQLCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 74
>gi|426386003|ref|XP_004059485.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C, partial
[Gorilla gorilla gorilla]
Length = 442
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 3 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 35
>gi|338728024|ref|XP_001916808.2| PREDICTED: RNA-binding protein MEX3C [Equus caballus]
Length = 472
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 33 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 65
>gi|148229134|ref|NP_057710.3| RNA-binding E3 ubiquitin-protein ligase MEX3C [Homo sapiens]
gi|134047827|sp|Q5U5Q3.3|MEX3C_HUMAN RecName: Full=RNA-binding E3 ubiquitin-protein ligase MEX3C;
AltName: Full=RING finger and KH domain-containing
protein 2; AltName: Full=RING finger protein 194
gi|63146648|gb|AAY34147.1| MEX3C [Homo sapiens]
Length = 659
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 220 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 252
>gi|402903138|ref|XP_003914436.1| PREDICTED: RNA-binding protein MEX3C [Papio anubis]
Length = 657
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 218 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 250
>gi|297702627|ref|XP_002828274.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3C [Pongo
abelii]
Length = 657
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 218 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 250
>gi|334325372|ref|XP_001362272.2| PREDICTED: RNA-binding protein MEX3C [Monodelphis domestica]
Length = 670
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 231 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 263
>gi|410977730|ref|XP_003995254.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C [Felis
catus]
Length = 673
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 25/29 (86%)
Query: 30 LRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 238 LLRRKSVNTTECVPVPSSEHVAEIVGRQG 266
>gi|391333528|ref|XP_003741165.1| PREDICTED: RNA-binding protein MEX3A-like [Metaseiulus
occidentalis]
Length = 480
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS N TECVPVPSSEHVAEIVGRQG
Sbjct: 97 QKKSQNTTECVPVPSSEHVAEIVGRQG 123
>gi|308193357|ref|NP_001025061.2| RNA-binding protein MEX3A [Mus musculus]
Length = 520
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G N + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 104 PTAPKGANDA-KLCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 152
>gi|392345821|ref|XP_227403.6| PREDICTED: RNA-binding protein MEX3A-like [Rattus norvegicus]
Length = 472
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+ L P G +G L + AE LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 48 LGLGEPPAPTAGEDGDDAKLCALXKEAE-LRLKGSSNTTECVPVPTSEHVAEIVGRQG 104
>gi|380805105|gb|AFE74428.1| RNA-binding protein MEX3D isoform 2, partial [Macaca mulatta]
Length = 270
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 5 SEPDSPLGLNGSPHL---PSFLQESAEDL-RNKKSANMTECVPVPSSEHVAEIVGRQG 58
S PD G P P+ L E + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 3 SPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 60
>gi|426219005|ref|XP_004003721.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3A [Ovis
aries]
Length = 419
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 123 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 152
>gi|426254085|ref|XP_004020716.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C [Ovis
aries]
Length = 655
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR KK N TECVPVPSSEHVAEIVGRQG
Sbjct: 216 EQAALLRRKK-VNTTECVPVPSSEHVAEIVGRQG 248
>gi|297280276|ref|XP_001113579.2| PREDICTED: RNA-binding protein MEX3A-like [Macaca mulatta]
Length = 539
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 142 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 171
>gi|397514151|ref|XP_003827360.1| PREDICTED: RNA-binding protein MEX3C [Pan paniscus]
Length = 722
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
+KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 289 RRKSVNTTECVPVPSSEHVAEIVGRQG 315
>gi|147901584|ref|NP_001091216.1| RNA-binding protein MEX3B [Xenopus laevis]
gi|134034169|sp|A1L3F4.1|MEX3B_XENLA RecName: Full=RNA-binding protein MEX3B; AltName: Full=RING
finger and KH domain-containing protein 3
gi|120577424|gb|AAI30070.1| LOC100036990 protein [Xenopus laevis]
gi|241661607|dbj|BAH79688.1| Mex-3 homolog b [Xenopus laevis]
Length = 507
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECV VPSSEHVAEIVGRQG
Sbjct: 54 KKSINMTECVQVPSSEHVAEIVGRQG 79
>gi|348527618|ref|XP_003451316.1| PREDICTED: RNA-binding protein MEX3B-like [Oreochromis niloticus]
Length = 524
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 13 LNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L G L + + S+ + + + N+TECVPVPSSEHVAEIVGRQG
Sbjct: 97 LQGKSKLCALYESSSSETKGR-GCNITECVPVPSSEHVAEIVGRQG 141
>gi|410927464|ref|XP_003977166.1| PREDICTED: RNA-binding protein MEX3A-like [Takifugu rubripes]
Length = 524
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 23 LQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L ES+ + N+TECVPVPSSEHVAEIVGRQG
Sbjct: 106 LYESSSSETKGRGCNITECVPVPSSEHVAEIVGRQG 141
>gi|395845169|ref|XP_003795315.1| PREDICTED: RNA-binding protein MEX3A [Otolemur garnettii]
Length = 460
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 63 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 92
>gi|440903634|gb|ELR54271.1| RNA-binding protein MEX3A [Bos grunniens mutus]
Length = 459
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 62 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 91
>gi|397500912|ref|XP_003821147.1| PREDICTED: RNA-binding protein MEX3A [Pan paniscus]
Length = 437
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 40 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 69
>gi|348517300|ref|XP_003446172.1| PREDICTED: RNA-binding protein MEX3C-like [Oreochromis niloticus]
Length = 671
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 20 PSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P + + L +KS N TECV VPSSEHVAEIVGRQG
Sbjct: 164 PDYGEAETSLLNRRKSVNTTECVAVPSSEHVAEIVGRQG 202
>gi|402856591|ref|XP_003892870.1| PREDICTED: RNA-binding protein MEX3A, partial [Papio anubis]
Length = 435
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 38 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 67
>gi|332219969|ref|XP_003259130.1| PREDICTED: RNA-binding protein MEX3A, partial [Nomascus
leucogenys]
Length = 448
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 52 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 81
>gi|147902746|ref|NP_001087194.1| RNA-binding protein MEX3A [Homo sapiens]
gi|332810710|ref|XP_513874.3| PREDICTED: RNA-binding protein MEX3A [Pan troglodytes]
gi|134034168|sp|A1L020.1|MEX3A_HUMAN RecName: Full=RNA-binding protein MEX3A; AltName: Full=RING finger
and KH domain-containing protein 4
gi|63146644|gb|AAY34145.1| MEX3A [Homo sapiens]
Length = 520
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 123 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 152
>gi|350583308|ref|XP_001926503.3| PREDICTED: RNA-binding protein MEX3A [Sus scrofa]
Length = 454
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 58 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 87
>gi|329664914|ref|NP_001193219.1| RNA-binding protein MEX3A [Bos taurus]
Length = 520
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 123 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 152
>gi|403294182|ref|XP_003938079.1| PREDICTED: RNA-binding protein MEX3A [Saimiri boliviensis
boliviensis]
Length = 465
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 68 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 97
>gi|355745733|gb|EHH50358.1| hypothetical protein EGM_01174, partial [Macaca fascicularis]
Length = 389
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 4 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 33
>gi|355558554|gb|EHH15334.1| hypothetical protein EGK_01408, partial [Macaca mulatta]
Length = 389
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 4 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 33
>gi|351696644|gb|EHA99562.1| RNA-binding protein MEX3A [Heterocephalus glaber]
Length = 467
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 70 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 99
>gi|345803001|ref|XP_547539.3| PREDICTED: RNA-binding protein MEX3A, partial [Canis lupus
familiaris]
Length = 443
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 47 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 76
>gi|403308195|ref|XP_003945232.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3D,
partial [Saimiri boliviensis boliviensis]
Length = 392
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 20 PSFLQESAEDL-RNKKSANMTECVPVPSSEHVAEIVGRQG 58
P+ L E + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 12 PTLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 51
>gi|296489760|tpg|DAA31873.1| TPA: MEX3A protein-like [Bos taurus]
Length = 559
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 162 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 191
>gi|292622726|ref|XP_002665080.1| PREDICTED: RNA-binding protein MEX3B-like [Danio rerio]
Length = 502
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 23 LQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L ES+ + N+TECVPVPSSEHVAEIVGRQG
Sbjct: 103 LYESSPTETKGRGCNITECVPVPSSEHVAEIVGRQG 138
>gi|332264052|ref|XP_003281063.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3B
[Nomascus leucogenys]
Length = 574
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 23/27 (85%)
Query: 32 NKKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPS EHVA IVGRQG
Sbjct: 66 RKKSVNMTECVPVPSFEHVAXIVGRQG 92
>gi|440905136|gb|ELR55561.1| RNA-binding protein MEX3C, partial [Bos grunniens mutus]
Length = 432
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 23/25 (92%)
Query: 34 KSANMTECVPVPSSEHVAEIVGRQG 58
KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 1 KSVNTTECVPVPSSEHVAEIVGRQG 25
>gi|410986932|ref|XP_003999762.1| PREDICTED: RNA-binding protein MEX3A, partial [Felis catus]
Length = 378
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 20 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 49
>gi|432873761|ref|XP_004072377.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like
[Oryzias latipes]
Length = 687
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 30 LRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L +KS N TECV VPSSEHVAEIVGRQG
Sbjct: 187 LSRRKSVNTTECVAVPSSEHVAEIVGRQG 215
>gi|410922826|ref|XP_003974883.1| PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like
[Takifugu rubripes]
Length = 655
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 30 LRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L +KS N TECV VPSSEHVAEIVGRQG
Sbjct: 181 LNRRKSVNTTECVAVPSSEHVAEIVGRQG 209
>gi|118196851|gb|AAI13385.1| MEX3D protein [Homo sapiens]
gi|211829895|gb|AAI13742.2| MEX3D protein [Homo sapiens]
Length = 489
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
NMTECVPVPSSEHVAEIVGRQG
Sbjct: 1 NMTECVPVPSSEHVAEIVGRQG 22
>gi|431892314|gb|ELK02754.1| RNA-binding protein MEX3A [Pteropus alecto]
Length = 468
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 29 DLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 78 ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 107
>gi|47212721|emb|CAF90459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 24/29 (82%)
Query: 30 LRNKKSANMTECVPVPSSEHVAEIVGRQG 58
L ++S N TECV VPSSEHVAEIVGRQG
Sbjct: 181 LSRRRSVNTTECVAVPSSEHVAEIVGRQG 209
>gi|147904537|ref|NP_001090570.1| mex-3 homolog C [Xenopus laevis]
gi|118764337|gb|AAI28670.1| LOC100036809 protein [Xenopus laevis]
Length = 493
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 33/54 (61%)
Query: 5 SEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
SE + L + G+ F SAE +KS N E VPVPSSEHVAEIVGRQG
Sbjct: 44 SEEAAALLMGGAGCQAGFPPGSAEQSGRRKSVNTNELVPVPSSEHVAEIVGRQG 97
>gi|62858813|ref|NP_001017067.1| mex-3 homolog C [Xenopus (Silurana) tropicalis]
gi|89266802|emb|CAJ83991.1| ring finger and KH domain containing 1 [Xenopus (Silurana)
tropicalis]
Length = 493
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 33/54 (61%)
Query: 5 SEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+E + L + G+ F SAE +KS N E VPVPSSEHVAEIVGRQG
Sbjct: 43 AEDAAALLMGGAGCQAGFPPGSAEQAGRRKSVNTNELVPVPSSEHVAEIVGRQG 96
>gi|170284921|gb|AAI61012.1| mex3c protein [Xenopus (Silurana) tropicalis]
Length = 442
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 25/33 (75%)
Query: 26 SAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
SAE +KS N E VPVPSSEHVAEIVGRQG
Sbjct: 13 SAEQAGRRKSVNTNELVPVPSSEHVAEIVGRQG 45
>gi|120577460|gb|AAI30196.1| LOC100037045 protein [Xenopus laevis]
Length = 390
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/25 (88%), Positives = 23/25 (92%)
Query: 34 KSANMTECVPVPSSEHVAEIVGRQG 58
K+ N TECVPVPSSEHVAEIVGRQG
Sbjct: 9 KTCNTTECVPVPSSEHVAEIVGRQG 33
>gi|149034549|gb|EDL89286.1| ring finger (C3HC4 type) and KH domain containing 1 (predicted)
[Rattus norvegicus]
Length = 71
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTECVPVPSSEHVAEIVGRQG
Sbjct: 1 MTECVPVPSSEHVAEIVGRQG 21
>gi|33317618|gb|AAQ04763.1|AF458084_1 bcl-2 ARE RNA binding protein [Homo sapiens]
Length = 488
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTECVPVPSSEHVAEIVGRQG
Sbjct: 1 MTECVPVPSSEHVAEIVGRQG 21
>gi|326667595|ref|XP_002667516.2| PREDICTED: RNA-binding protein MEX3C-like [Danio rerio]
Length = 533
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 23/26 (88%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
+KS N TECV VP+SEHVAEIVGRQG
Sbjct: 136 RKSVNTTECVMVPTSEHVAEIVGRQG 161
>gi|347963992|ref|XP_003437020.1| AGAP013259-PA [Anopheles gambiae str. PEST]
gi|333466939|gb|EGK96426.1| AGAP013259-PA [Anopheles gambiae str. PEST]
Length = 654
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 23/28 (82%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R K + TECVPVPSSEHVAEIVGRQG
Sbjct: 194 RPVKYKSHTECVPVPSSEHVAEIVGRQG 221
>gi|170075173|ref|XP_001871007.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871968|gb|EDS35351.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 502
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 23/28 (82%)
Query: 31 RNKKSANMTECVPVPSSEHVAEIVGRQG 58
R K + TECVPVPSSEHVAEIVGRQG
Sbjct: 124 RPVKYKSHTECVPVPSSEHVAEIVGRQG 151
>gi|351704938|gb|EHB07857.1| RNA-binding protein MEX3B [Heterocephalus glaber]
Length = 502
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTECVPVPSSEHVAEIVGRQG
Sbjct: 1 MTECVPVPSSEHVAEIVGRQG 21
>gi|157133308|ref|XP_001662827.1| hypothetical protein AaeL_AAEL012708 [Aedes aegypti]
gi|108870879|gb|EAT35104.1| AAEL012708-PA [Aedes aegypti]
Length = 482
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 22/25 (88%)
Query: 34 KSANMTECVPVPSSEHVAEIVGRQG 58
K + TECVPVPSSEHVAEIVGRQG
Sbjct: 103 KYKSHTECVPVPSSEHVAEIVGRQG 127
>gi|312374566|gb|EFR22096.1| hypothetical protein AND_15783 [Anopheles darlingi]
Length = 656
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 22/25 (88%)
Query: 34 KSANMTECVPVPSSEHVAEIVGRQG 58
K + TECVPVPSSEHVAEIVGRQG
Sbjct: 178 KYKSHTECVPVPSSEHVAEIVGRQG 202
>gi|148744268|gb|AAI42552.1| LOC100101285 protein [Xenopus laevis]
Length = 595
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 23/26 (88%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
++ NMTE VPVPSSEHVAEIVGRQG
Sbjct: 152 RRGVNMTEGVPVPSSEHVAEIVGRQG 177
>gi|340380635|ref|XP_003388827.1| PREDICTED: hypothetical protein LOC100641473 [Amphimedon
queenslandica]
Length = 808
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 34 KSANMTECVPVPSSEHVAEIVGRQG 58
+S N+T CV VPSSEHVAEIVGRQG
Sbjct: 391 RSLNVTHCVAVPSSEHVAEIVGRQG 415
>gi|224087300|ref|XP_002192897.1| PREDICTED: RNA-binding protein MEX3D [Taeniopygia guttata]
Length = 436
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTECVPVPSSEHV EIVGRQG
Sbjct: 1 MTECVPVPSSEHVPEIVGRQG 21
>gi|426332152|ref|XP_004027056.1| PREDICTED: RNA-binding protein MEX3A [Gorilla gorilla gorilla]
Length = 640
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/20 (95%), Positives = 20/20 (100%)
Query: 39 TECVPVPSSEHVAEIVGRQG 58
TECVPVP+SEHVAEIVGRQG
Sbjct: 253 TECVPVPTSEHVAEIVGRQG 272
>gi|324506677|gb|ADY42845.1| RNA-binding protein MEX3B [Ascaris suum]
Length = 609
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 25 ESAEDLRNKKS---ANMTECVPVPSSEHVAEIVGRQG 58
ES +D R S N+TE V VPSSEHVAEIVGRQG
Sbjct: 141 ESHDDFRAALSLSARNITESVEVPSSEHVAEIVGRQG 177
>gi|324501433|gb|ADY40639.1| RNA-binding protein MEX3B [Ascaris suum]
Length = 603
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 25 ESAEDLRNKKS---ANMTECVPVPSSEHVAEIVGRQG 58
ES +D R S N+TE V VPSSEHVAEIVGRQG
Sbjct: 135 ESHDDFRAALSLSARNITESVEVPSSEHVAEIVGRQG 171
>gi|324511310|gb|ADY44714.1| RNA-binding protein MEX3B, partial [Ascaris suum]
Length = 393
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 25 ESAEDLRNKKS---ANMTECVPVPSSEHVAEIVGRQG 58
ES +D R S N+TE V VPSSEHVAEIVGRQG
Sbjct: 144 ESHDDFRAALSLSARNITESVEVPSSEHVAEIVGRQG 180
>gi|147905334|ref|NP_001089119.1| uncharacterized protein LOC733399 [Xenopus laevis]
gi|120577567|gb|AAI30114.1| LOC733399 protein [Xenopus laevis]
gi|124481745|gb|AAI33220.1| LOC733399 protein [Xenopus laevis]
Length = 440
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTE VPVPSSEHVAEIVGRQG
Sbjct: 1 MTEAVPVPSSEHVAEIVGRQG 21
>gi|293345462|ref|XP_002726018.1| PREDICTED: RNA-binding protein MEX3A-like [Rattus norvegicus]
Length = 453
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/20 (95%), Positives = 20/20 (100%)
Query: 39 TECVPVPSSEHVAEIVGRQG 58
TECVPVP+SEHVAEIVGRQG
Sbjct: 66 TECVPVPTSEHVAEIVGRQG 85
>gi|183986709|ref|NP_001116944.1| mex-3 homolog D [Xenopus (Silurana) tropicalis]
gi|166796480|gb|AAI59375.1| mex3d protein [Xenopus (Silurana) tropicalis]
Length = 439
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 38 MTECVPVPSSEHVAEIVGRQG 58
MTE VPVPSSEHVAEIVGRQG
Sbjct: 1 MTEGVPVPSSEHVAEIVGRQG 21
>gi|402903589|ref|XP_003914646.1| PREDICTED: RNA-binding protein MEX3D [Papio anubis]
Length = 564
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 41 CVPVPSSEHVAEIVGRQG 58
CVPVPSSEHVAEIVGRQG
Sbjct: 81 CVPVPSSEHVAEIVGRQG 98
>gi|268563130|ref|XP_002638761.1| C. briggsae CBR-MEX-3 protein [Caenorhabditis briggsae]
Length = 464
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 75 NVTESVDVPTSEHVAEIVGRQG 96
>gi|1644450|gb|AAC47313.1| MEX-3 [Caenorhabditis elegans]
Length = 415
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 46 NVTESVEVPTSEHVAEIVGRQG 67
>gi|71986869|ref|NP_490681.2| Protein MEX-3, isoform b [Caenorhabditis elegans]
gi|373220019|emb|CCD71704.1| Protein MEX-3, isoform b [Caenorhabditis elegans]
Length = 443
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 77 NVTESVEVPTSEHVAEIVGRQG 98
>gi|71986863|ref|NP_001021489.1| Protein MEX-3, isoform a [Caenorhabditis elegans]
gi|373220018|emb|CCD71703.1| Protein MEX-3, isoform a [Caenorhabditis elegans]
Length = 415
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 46 NVTESVEVPTSEHVAEIVGRQG 67
>gi|308497969|ref|XP_003111171.1| CRE-MEX-3 protein [Caenorhabditis remanei]
gi|308240719|gb|EFO84671.1| CRE-MEX-3 protein [Caenorhabditis remanei]
Length = 453
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 77 NVTESVEVPTSEHVAEIVGRQG 98
>gi|345784375|ref|XP_533399.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3C [Canis
lupus familiaris]
Length = 594
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 11 LGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
GL G + E A LR K TECVPVP HVAEIVGRQG
Sbjct: 142 YGLGGC-RAAALFGELAALLR-MKIVYTTECVPVPRXYHVAEIVGRQG 187
>gi|341895301|gb|EGT51236.1| CBN-MEX-3 protein [Caenorhabditis brenneri]
Length = 518
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 49 NVTESVEVPTSEHVAEIVGRQG 70
>gi|341880576|gb|EGT36511.1| hypothetical protein CAEBREN_24563 [Caenorhabditis brenneri]
Length = 499
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 37 NMTECVPVPSSEHVAEIVGRQG 58
N+TE V VP+SEHVAEIVGRQG
Sbjct: 49 NVTESVEVPTSEHVAEIVGRQG 70
>gi|313234467|emb|CBY24667.1| unnamed protein product [Oikopleura dioica]
Length = 719
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KK N E + VP+SEHVAEIVG+QG
Sbjct: 134 KKCQNTKETIKVPTSEHVAEIVGKQG 159
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 997,339,853
Number of Sequences: 23463169
Number of extensions: 31057058
Number of successful extensions: 51765
Number of sequences better than 100.0: 207
Number of HSP's better than 100.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51558
Number of HSP's gapped (non-prelim): 207
length of query: 61
length of database: 8,064,228,071
effective HSP length: 33
effective length of query: 28
effective length of database: 7,289,943,494
effective search space: 204118417832
effective search space used: 204118417832
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)