Your job contains 1 sequence.
>psy3064
MNLSSEPDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQGFG
M
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3064
(61 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039920 - symbol:CG11360 species:7227 "Drosophila ... 147 2.5e-09 1
UNIPROTKB|F1M336 - symbol:Mex3d "Protein Mex3d" species:1... 137 2.9e-08 1
MGI|MGI:2681847 - symbol:Mex3d "mex3 homolog D (C. elegan... 137 3.1e-08 1
RGD|1310576 - symbol:Mex3d "mex-3 homolog D (C. elegans)"... 137 3.4e-08 1
UNIPROTKB|I3LKC4 - symbol:MEX3D "Uncharacterized protein"... 136 3.5e-08 1
UNIPROTKB|Q86XN8 - symbol:MEX3D "RNA-binding protein MEX3... 132 1.1e-07 1
UNIPROTKB|E9PAL6 - symbol:MEX3D "RNA-binding protein MEX3... 132 1.1e-07 1
UNIPROTKB|J9P026 - symbol:MEX3B "Uncharacterized protein"... 130 1.1e-07 1
ZFIN|ZDB-GENE-030131-2628 - symbol:mex3b "mex-3 homolog B... 130 1.3e-07 1
UNIPROTKB|F1PM07 - symbol:MEX3B "Uncharacterized protein"... 130 1.4e-07 1
UNIPROTKB|Q6ZN04 - symbol:MEX3B "RNA-binding protein MEX3... 130 1.5e-07 1
UNIPROTKB|J9JHU9 - symbol:MEX3B "Uncharacterized protein"... 130 1.5e-07 1
UNIPROTKB|F1RLQ1 - symbol:MEX3A "Uncharacterized protein"... 128 1.5e-07 1
MGI|MGI:1918252 - symbol:Mex3b "mex3 homolog B (C. elegan... 130 1.6e-07 1
RGD|1306790 - symbol:Mex3b "mex3 homolog B (C. elegans)" ... 130 1.6e-07 1
UNIPROTKB|E1B7I1 - symbol:MEX3A "Uncharacterized protein"... 128 1.9e-07 1
UNIPROTKB|A1L020 - symbol:MEX3A "RNA-binding protein MEX3... 128 2.1e-07 1
UNIPROTKB|D4A2R5 - symbol:Mex3c "Protein Mex3c" species:1... 125 3.7e-07 1
RGD|1309023 - symbol:Mex3c "mex-3 homolog C (C. elegans)"... 125 4.3e-07 1
UNIPROTKB|F1N0W7 - symbol:MEX3C "Uncharacterized protein"... 125 4.3e-07 1
MGI|MGI:2652843 - symbol:Mex3c "mex3 homolog C (C. elegan... 125 6.1e-07 1
UNIPROTKB|Q5U5Q3 - symbol:MEX3C "RNA-binding E3 ubiquitin... 125 6.1e-07 1
>FB|FBgn0039920 [details] [associations]
symbol:CG11360 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AE014135 GO:GO:0000381 KO:K15686 GeneTree:ENSGT00390000018714
EMBL:BT132709 RefSeq:NP_651934.2 UniGene:Dm.24122 SMR:Q9V4F3
EnsemblMetazoa:FBtr0089091 EnsemblMetazoa:FBtr0310539
EnsemblMetazoa:FBtr0310540 EnsemblMetazoa:FBtr0310541 GeneID:43810
KEGG:dme:Dmel_CG11360 UCSC:CG11360-RA FlyBase:FBgn0039920
InParanoid:Q9V4F3 OMA:ATIKHIQ OrthoDB:EOG4J3TZX GenomeRNAi:43810
NextBio:835995 Uniprot:Q9V4F3
Length = 628
Score = 147 (56.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 34/54 (62%), Positives = 41/54 (75%)
Query: 8 DSPLGLNGSPH---LPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
+S L + +P+ LP+ S+ED R+KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 91 NSTLPIPSAPNCLLLPNAGAVSSED-RSKKSQNMTECVPVPSSEHVAEIVGRQG 143
>UNIPROTKB|F1M336 [details] [associations]
symbol:Mex3d "Protein Mex3d" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 RGD:1310576
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00390000018714 IPI:IPI00948007
Ensembl:ENSRNOT00000065974 ArrayExpress:F1M336 Uniprot:F1M336
Length = 618
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 36/65 (55%), Positives = 42/65 (64%)
Query: 2 NLSSEPDSP-LGLNGSPHLPSFLQES---AEDLR----NKKSANMTECVPVPSSEHVAEI 53
++S P P + + +PH P+ L S AE L KKS NMTECVPVPSSEHVAEI
Sbjct: 90 DVSPRPSPPDVFASFAPH-PAALGPSTLLAEQLNVIGSRKKSVNMTECVPVPSSEHVAEI 148
Query: 54 VGRQG 58
VGRQG
Sbjct: 149 VGRQG 153
>MGI|MGI:2681847 [details] [associations]
symbol:Mex3d "mex3 homolog D (C. elegans)" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006402
"mRNA catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050779 "RNA destabilization" evidence=ISO] [GO:0061157 "mRNA
destabilization" evidence=NAS] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 MGI:MGI:2681847
Prosite:PS00518 GO:GO:0005634 GO:GO:0048471 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0017091 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q00341 GO:GO:0061157 HOVERGEN:HBG071698
KO:K15686 eggNOG:NOG260228 HOGENOM:HOG000236282 CTD:399664
EMBL:CAAA01108096 EMBL:AC152062 EMBL:AK149801 IPI:IPI00831125
IPI:IPI00957037 RefSeq:NP_941017.2 UniGene:Mm.268389
ProteinModelPortal:Q3UE17 SMR:Q3UE17 PhosphoSite:Q3UE17
PaxDb:Q3UE17 PRIDE:Q3UE17 GeneID:237400 KEGG:mmu:237400
InParanoid:Q3UE17 NextBio:383340 CleanEx:MM_MEX3D
Genevestigator:Q3UE17 Uniprot:Q3UE17
Length = 643
Score = 137 (53.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/65 (55%), Positives = 42/65 (64%)
Query: 2 NLSSEPDSP-LGLNGSPHLPSFLQES---AEDLR----NKKSANMTECVPVPSSEHVAEI 53
++S P P + + +PH P+ L S AE L KKS NMTECVPVPSSEHVAEI
Sbjct: 117 DVSPRPSPPDVFASFAPH-PAALGPSTLLAEQLNVIGSRKKSVNMTECVPVPSSEHVAEI 175
Query: 54 VGRQG 58
VGRQG
Sbjct: 176 VGRQG 180
>RGD|1310576 [details] [associations]
symbol:Mex3d "mex-3 homolog D (C. elegans)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
InterPro:IPR001841 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089 SMART:SM00184
SMART:SM00322 RGD:1310576 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00390000018714
IPI:IPI00369458 Ensembl:ENSRNOT00000040170 ArrayExpress:F1M5V7
Uniprot:F1M5V7
Length = 692
Score = 137 (53.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 36/65 (55%), Positives = 42/65 (64%)
Query: 2 NLSSEPDSP-LGLNGSPHLPSFLQES---AEDLR----NKKSANMTECVPVPSSEHVAEI 53
++S P P + + +PH P+ L S AE L KKS NMTECVPVPSSEHVAEI
Sbjct: 164 DVSPRPSPPDVFASFAPH-PAALGPSTLLAEQLNVIGSRKKSVNMTECVPVPSSEHVAEI 222
Query: 54 VGRQG 58
VGRQG
Sbjct: 223 VGRQG 227
>UNIPROTKB|I3LKC4 [details] [associations]
symbol:MEX3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000018714 OMA:KAPNPGR EMBL:CU972485
Ensembl:ENSSSCT00000022668 Uniprot:I3LKC4
Length = 593
Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 34/64 (53%), Positives = 40/64 (62%)
Query: 2 NLSSEPDSPLGLNG-SPHL-----PSFLQESAEDLRN-KKSANMTECVPVPSSEHVAEIV 54
++S P P G +PH P+ L E + + KKS NMTECVPVPSSEHVAEIV
Sbjct: 75 DVSPRPSPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSVNMTECVPVPSSEHVAEIV 134
Query: 55 GRQG 58
GRQG
Sbjct: 135 GRQG 138
>UNIPROTKB|Q86XN8 [details] [associations]
symbol:MEX3D "RNA-binding protein MEX3D" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0061157 "mRNA destabilization"
evidence=NAS] [GO:0010609 "mRNA localization resulting in
posttranscriptional regulation of gene expression" evidence=NAS]
[GO:0017091 "AU-rich element binding" evidence=IDA] [GO:0042981
"regulation of apoptotic process" evidence=NAS] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 EMBL:AF458084
Prosite:PS00518 GO:GO:0005634 GO:GO:0048471 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0017091 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0061157 HOVERGEN:HBG071698 KO:K15686
eggNOG:NOG260228 HOGENOM:HOG000236282 OrthoDB:EOG4XPQG9
EMBL:AY950680 EMBL:AB107353 EMBL:BC113384 EMBL:BC113741
IPI:IPI00478085 IPI:IPI00783891 RefSeq:NP_001167589.1
RefSeq:NP_976049.3 UniGene:Hs.436495 PDB:2DGR PDBsum:2DGR
ProteinModelPortal:Q86XN8 SMR:Q86XN8 STRING:Q86XN8
PhosphoSite:Q86XN8 DMDM:134047829 PRIDE:Q86XN8
Ensembl:ENST00000402693 GeneID:399664 KEGG:hsa:399664
UCSC:uc010dsn.3 CTD:399664 GeneCards:GC19M001554 HGNC:HGNC:16734
MIM:611009 neXtProt:NX_Q86XN8 PharmGKB:PA162395829
EvolutionaryTrace:Q86XN8 GenomeRNAi:399664 NextBio:105463
ArrayExpress:Q86XN8 Bgee:Q86XN8 CleanEx:HS_MEX3D
Genevestigator:Q86XN8 GermOnline:ENSG00000181588 GO:GO:0010609
Uniprot:Q86XN8
Length = 651
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/58 (55%), Positives = 36/58 (62%)
Query: 5 SEPDSPLGLNGSPHL---PSFLQESAEDLRN-KKSANMTECVPVPSSEHVAEIVGRQG 58
S PD G P P+ L + + + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 142 SPPDVFAGFAPHPAALGPPTLLADQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 199
>UNIPROTKB|E9PAL6 [details] [associations]
symbol:MEX3D "RNA-binding protein MEX3D" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005943
KO:K15686 IPI:IPI00783891 RefSeq:NP_001167589.1 UniGene:Hs.436495
GeneID:399664 KEGG:hsa:399664 CTD:399664 HGNC:HGNC:16734
GenomeRNAi:399664 NextBio:105463 EMBL:AC027307
ProteinModelPortal:E9PAL6 SMR:E9PAL6 Ensembl:ENST00000388824
UCSC:uc021uml.1 OMA:KAPNPGR ArrayExpress:E9PAL6 Bgee:E9PAL6
Uniprot:E9PAL6
Length = 666
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/58 (55%), Positives = 36/58 (62%)
Query: 5 SEPDSPLGLNGSPHL---PSFLQESAEDLRN-KKSANMTECVPVPSSEHVAEIVGRQG 58
S PD G P P+ L + + + KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 142 SPPDVFAGFAPHPAALGPPTLLADQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQG 199
>UNIPROTKB|J9P026 [details] [associations]
symbol:MEX3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00390000018714
EMBL:AAEX03002364 EMBL:AAEX03002365 Ensembl:ENSCAFT00000048532
Uniprot:J9P026
Length = 480
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 74 KKSVNMTECVPVPSSEHVAEIVGRQG 99
>ZFIN|ZDB-GENE-030131-2628 [details] [associations]
symbol:mex3b "mex-3 homolog B (C. elegans)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 ZFIN:ZDB-GENE-030131-2628 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG071698 KO:K15686 CTD:84206 eggNOG:NOG260228
HOGENOM:HOG000236282 OMA:SPDGCPE OrthoDB:EOG4XPQG9
GeneTree:ENSGT00390000018714 EMBL:CU929131 EMBL:BC131871
IPI:IPI00610368 RefSeq:NP_001074462.1 UniGene:Dr.105567 SMR:A2RRV6
Ensembl:ENSDART00000101537 GeneID:569582 KEGG:dre:569582
NextBio:20889751 Uniprot:A2RRV6
Length = 537
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 53 KKSVNMTECVPVPSSEHVAEIVGRQG 78
>UNIPROTKB|F1PM07 [details] [associations]
symbol:MEX3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000018714 EMBL:AAEX03002364 EMBL:AAEX03002365
Ensembl:ENSCAFT00000021833 Uniprot:F1PM07
Length = 567
Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 61 KKSVNMTECVPVPSSEHVAEIVGRQG 86
>UNIPROTKB|Q6ZN04 [details] [associations]
symbol:MEX3B "RNA-binding protein MEX3B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0046777 "protein autophosphorylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008270 GO:GO:0005509
GO:GO:0046777 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000932 HOVERGEN:HBG071698 KO:K15686 EMBL:AY950678
EMBL:AK131424 EMBL:AB095929 EMBL:BC036211 EMBL:BC111545
EMBL:AL136778 IPI:IPI00300213 IPI:IPI00829592 RefSeq:NP_115622.2
UniGene:Hs.104744 HSSP:Q96AE4 ProteinModelPortal:Q6ZN04 SMR:Q6ZN04
IntAct:Q6ZN04 MINT:MINT-1420202 STRING:Q6ZN04 PhosphoSite:Q6ZN04
DMDM:74762391 PaxDb:Q6ZN04 PRIDE:Q6ZN04 DNASU:84206
Ensembl:ENST00000329713 Ensembl:ENST00000558133 GeneID:84206
KEGG:hsa:84206 UCSC:uc002bgq.1 CTD:84206 GeneCards:GC15M082334
HGNC:HGNC:25297 HPA:HPA041093 MIM:611008 neXtProt:NX_Q6ZN04
PharmGKB:PA162395820 eggNOG:NOG260228 HOGENOM:HOG000236282
InParanoid:Q6ZN04 OMA:SPDGCPE OrthoDB:EOG4XPQG9 PhylomeDB:Q6ZN04
GenomeRNAi:84206 NextBio:73616 Bgee:Q6ZN04 CleanEx:HS_MEX3B
Genevestigator:Q6ZN04 Uniprot:Q6ZN04
Length = 569
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 61 KKSVNMTECVPVPSSEHVAEIVGRQG 86
>UNIPROTKB|J9JHU9 [details] [associations]
symbol:MEX3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:SPDGCPE GeneTree:ENSGT00390000018714 EMBL:AAEX03002364
EMBL:AAEX03002365 Ensembl:ENSCAFT00000048946 Uniprot:J9JHU9
Length = 580
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 74 KKSVNMTECVPVPSSEHVAEIVGRQG 99
>UNIPROTKB|F1RLQ1 [details] [associations]
symbol:MEX3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083 OMA:GYSGYLF
GeneTree:ENSGT00390000018714 EMBL:CU302298
Ensembl:ENSSSCT00000007116 Uniprot:F1RLQ1
Length = 424
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G + + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 9 PTAPKGASDAK-LCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 57
>MGI|MGI:1918252 [details] [associations]
symbol:Mex3b "mex3 homolog B (C. elegans)" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 MGI:MGI:1918252 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
HOVERGEN:HBG071698 HSSP:Q96AE4 eggNOG:NOG260228
HOGENOM:HOG000236282 OrthoDB:EOG4XPQG9 EMBL:AK173330 EMBL:BC031512
EMBL:BC067199 EMBL:BC108401 IPI:IPI00663491 UniGene:Mm.306789
ProteinModelPortal:Q69Z36 SMR:Q69Z36 PhosphoSite:Q69Z36
PRIDE:Q69Z36 UCSC:uc009idj.2 InParanoid:Q69Z36 CleanEx:MM_MEX3B
Genevestigator:Q69Z36 Uniprot:Q69Z36
Length = 601
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 68 KKSVNMTECVPVPSSEHVAEIVGRQG 93
>RGD|1306790 [details] [associations]
symbol:Mex3b "mex3 homolog B (C. elegans)" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 OrthoDB:EOG4XPQG9 GeneTree:ENSGT00390000018714
IPI:IPI00368187 Ensembl:ENSRNOT00000039748 Uniprot:D3ZFL6
Length = 601
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 33 KKSANMTECVPVPSSEHVAEIVGRQG 58
KKS NMTECVPVPSSEHVAEIVGRQG
Sbjct: 68 KKSVNMTECVPVPSSEHVAEIVGRQG 93
>UNIPROTKB|E1B7I1 [details] [associations]
symbol:MEX3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083 OMA:GYSGYLF
GeneTree:ENSGT00390000018714 EMBL:DAAA02007146 IPI:IPI00715039
Ensembl:ENSBTAT00000025498 Uniprot:E1B7I1
Length = 484
Score = 128 (50.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G + + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 68 PTAPKGASDAK-LCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 116
>UNIPROTKB|A1L020 [details] [associations]
symbol:MEX3A "RNA-binding protein MEX3A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089 SMART:SM00184
SMART:SM00322 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000932 EMBL:AY950677 IPI:IPI00385217 RefSeq:NP_001087194.1
UniGene:Hs.591496 ProteinModelPortal:A1L020 SMR:A1L020
PhosphoSite:A1L020 PRIDE:A1L020 Ensembl:ENST00000532414
GeneID:92312 KEGG:hsa:92312 UCSC:uc001fnd.4 CTD:92312
GeneCards:GC01M156041 HGNC:HGNC:33482 MIM:611007 neXtProt:NX_A1L020
PharmGKB:PA162395812 HOVERGEN:HBG071698 KO:K15686 OMA:GYSGYLF
GenomeRNAi:92312 NextBio:77692 Bgee:A1L020 CleanEx:HS_MEX3A
Genevestigator:A1L020 Uniprot:A1L020
Length = 520
Score = 128 (50.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 PDSPLGLNGSPHLPSFLQESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
P +P G + + L + +E+ +LR K S+N TECVPVP+SEHVAEIVGRQG
Sbjct: 104 PTAPKGASDAK-LCALYKEA--ELRLKGSSNTTECVPVPTSEHVAEIVGRQG 152
>UNIPROTKB|D4A2R5 [details] [associations]
symbol:Mex3c "Protein Mex3c" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 RGD:1309023
GO:GO:0043231 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH473971 KO:K15686
CTD:51320 GeneTree:ENSGT00390000018714 IPI:IPI00560031
RefSeq:NP_001100847.1 UniGene:Rn.8138 Ensembl:ENSRNOT00000041227
GeneID:307271 KEGG:rno:307271 NextBio:657191 Uniprot:D4A2R5
Length = 464
Score = 125 (49.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 25 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 57
>RGD|1309023 [details] [associations]
symbol:Mex3c "mex-3 homolog C (C. elegans)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089 SMART:SM00184
SMART:SM00322 RGD:1309023 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00766855
Ensembl:ENSRNOT00000021130 Uniprot:F1M8U4
Length = 511
Score = 125 (49.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 72 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 104
>UNIPROTKB|F1N0W7 [details] [associations]
symbol:MEX3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 GO:GO:0043231
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:SQTIWTP GeneTree:ENSGT00390000018714
EMBL:DAAA02057036 IPI:IPI00838311 UniGene:Bt.54148
Ensembl:ENSBTAT00000019818 NextBio:20875011 Uniprot:F1N0W7
Length = 516
Score = 125 (49.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 77 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 109
>MGI|MGI:2652843 [details] [associations]
symbol:Mex3c "mex3 homolog C (C. elegans)" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 MGI:MGI:2652843
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 HOVERGEN:HBG071698 KO:K15686 eggNOG:NOG260228
HOGENOM:HOG000236282 CTD:51320 OMA:SQTIWTP OrthoDB:EOG4PK27W
EMBL:AC134447 EMBL:BC108422 EMBL:BC125427 IPI:IPI00788371
RefSeq:NP_001034303.3 UniGene:Mm.24131 UniGene:Mm.436942
ProteinModelPortal:Q05A36 SMR:Q05A36 STRING:Q05A36
PhosphoSite:Q05A36 PRIDE:Q05A36 Ensembl:ENSMUST00000091852
GeneID:240396 KEGG:mmu:240396 UCSC:uc008fot.2
GeneTree:ENSGT00390000018714 InParanoid:Q05A36 NextBio:384570
Bgee:Q05A36 CleanEx:MM_MEX3C Genevestigator:Q05A36 Uniprot:Q05A36
Length = 652
Score = 125 (49.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 213 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 245
>UNIPROTKB|Q5U5Q3 [details] [associations]
symbol:MEX3C "RNA-binding E3 ubiquitin-protein ligase
MEX3C" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001841
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50089 SMART:SM00184 SMART:SM00322 Prosite:PS00518
GO:GO:0043231 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 HOVERGEN:HBG071698 KO:K15686 eggNOG:NOG260228
HOGENOM:HOG000236282 EMBL:AY950679 EMBL:AC090330 EMBL:BC041122
EMBL:AF208855 IPI:IPI00790901 RefSeq:NP_057710.3 UniGene:Hs.465144
ProteinModelPortal:Q5U5Q3 SMR:Q5U5Q3 IntAct:Q5U5Q3 STRING:Q5U5Q3
PhosphoSite:Q5U5Q3 DMDM:134047827 PRIDE:Q5U5Q3 DNASU:51320
Ensembl:ENST00000406189 GeneID:51320 KEGG:hsa:51320 UCSC:uc002lfc.4
CTD:51320 GeneCards:GC18M048700 HGNC:HGNC:28040 HPA:HPA040603
MIM:611005 neXtProt:NX_Q5U5Q3 PharmGKB:PA162395821
InParanoid:Q5U5Q3 OMA:SQTIWTP OrthoDB:EOG4PK27W GenomeRNAi:51320
NextBio:54697 ArrayExpress:Q5U5Q3 Bgee:Q5U5Q3 CleanEx:HS_MEX3C
Genevestigator:Q5U5Q3 Uniprot:Q5U5Q3
Length = 659
Score = 125 (49.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Query: 25 ESAEDLRNKKSANMTECVPVPSSEHVAEIVGRQG 58
E A LR +KS N TECVPVPSSEHVAEIVGRQG
Sbjct: 220 EQAALLR-RKSVNTTECVPVPSSEHVAEIVGRQG 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.128 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 61 61 0.00091 102 3 11 23 0.46 28
29 0.39 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 414 (44 KB)
Total size of DFA: 73 KB (2063 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 9.51u 0.10s 9.61t Elapsed: 00:00:02
Total cpu time: 9.51u 0.10s 9.61t Elapsed: 00:00:03
Start: Thu Aug 15 14:45:35 2013 End: Thu Aug 15 14:45:38 2013