BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3067
(141 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91094511|ref|XP_971832.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H
(hnRNP H) [Tribolium castaneum]
gi|270000730|gb|EEZ97177.1| hypothetical protein TcasGA2_TC004364 [Tribolium castaneum]
Length = 379
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 17/104 (16%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDD----------------IAQFFDGLEIIS 52
+ RYIEVFKV + EMDW ++ +G G DD IAQFF GLEI+
Sbjct: 77 IGSRYIEVFKVNKAEMDWVIKRSGPTYGVNDDGCVRLRGLPFGCSKEEIAQFFTGLEIVP 136
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL+ D ++GR +GEAYVQFV+KE AE AL KH+E+IGHRYI
Sbjct: 137 NGITLLTD-YSGRSSGEAYVQFVNKEVAEKALLKHREKIGHRYI 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DI +FF ++ + + + + GRP+GEA+V+F ++ AL+K +E IG RYI
Sbjct: 24 EDILKFFKNCKVFNGKLGIHMTSSREGRPSGEAFVEFESEDDLNSALRKDREHIGSRYI 82
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF I+ + L++D NGR +GEA V+F E A A+ K K + HRYI
Sbjct: 303 DITDFFK--PIVPTNVKLLQD-HNGRASGEADVEFASHEDAMRAMSKDKGHMQHRYI 356
>gi|307203918|gb|EFN82825.1| Heterogeneous nuclear ribonucleoprotein H2 [Harpegnathos saltator]
Length = 388
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 69/102 (67%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G+ +E DD IAQFF GLEI+ NG
Sbjct: 67 RYIEVFKAKRGEMEWVVKRSGLNLENAMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 126
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHRYI
Sbjct: 127 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRYI 167
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I SNG V + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 11 DEIIKFFADCSI-SNGKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYI 69
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 284 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEAVKAMCKDKSHMLHRYI 337
>gi|193643553|ref|XP_001946497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 518
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIV-----------------EGKKDDIAQFFDGLEII 51
+ +RYIEVF+ +R EM+W ++ TG KDDI QFF GLE+
Sbjct: 125 MGNRYIEVFRSKRSEMEWVIKKTGSTLDSVLDDNCVRLRGLPFGSTKDDIVQFFQGLEMT 184
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+GIT+ D F GR TGEA+VQFVD+E AE ALQKHKE+IGHRYI
Sbjct: 185 PDGITIATD-FTGRSTGEAFVQFVDRENAEKALQKHKEKIGHRYI 228
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ +DDIA FF+ LE + I N RP+GEA V+F +KE A A+ K K + HR
Sbjct: 355 KANEDDIATFFEPLEPVDIRILFNN---NNRPSGEANVEFGNKEDAMRAMSKDKTYMQHR 411
Query: 95 YI 96
YI
Sbjct: 412 YI 413
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEAYV+ +E + AL+K +E +G+RYI
Sbjct: 98 GRPSGEAYVEMESEEDLKAALKKDREHMGNRYI 130
>gi|47086853|ref|NP_997754.1| heterogeneous nuclear ribonucleoprotein H1, like [Danio rerio]
gi|28278402|gb|AAH44161.1| Zgc:85960 [Danio rerio]
gi|182891430|gb|AAI64507.1| Zgc:85960 protein [Danio rerio]
Length = 407
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 83/147 (56%), Gaps = 30/147 (20%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI----VEG-------------KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG EG K++I QFF GLEI+ NG
Sbjct: 77 RYVEVFKSNNVEMDWVLKHTGPNCPETEGDGLVRLRGLPFGCSKEEIVQFFSGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 137 ITLPVD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPR 195
Query: 112 CETSIPVSSSTHKPGRHHTLDGPNGGG 138
+ +PG + D P+GGG
Sbjct: 196 KGMGM------QRPGPY---DRPSGGG 213
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQ 73
E F VR + + W +++++FF G +I SNG + GRP+GEA+V+
Sbjct: 5 EGFVVRVRGLPWSCS--------AEEVSRFFSGCKISSNGSAIHFTYTREGRPSGEAFVE 56
Query: 74 FVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRC 112
++ ++A++K +E +GHRY+ F + + ++H P C
Sbjct: 57 LESEDDLKIAVKKDRESMGHRYVEVFKSNNVEMDWVLKHTGPNC 100
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K + HRY+
Sbjct: 269 DIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSNDKANMQHRYV 322
>gi|326928641|ref|XP_003210484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Meleagris gallopavo]
Length = 477
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 96 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 155
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 156 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 214
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 215 KLMAMQRPGPYDRPG 229
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 40 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 98
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 310 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 365
>gi|53127638|emb|CAG31148.1| hypothetical protein RCJMB04_2m14 [Gallus gallus]
Length = 492
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 111 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 170
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 171 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 229
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 230 KLMAMQRPGPYDRPG 244
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 55 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 113
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 325 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 380
>gi|449474971|ref|XP_002195792.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Taeniopygia
guttata]
Length = 419
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 62 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 121
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 122 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 180
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 181 KLLAMQRPGPYDRPG 195
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 32 GRPSGEAFAELESEEDVKLALKKDRETMGHRYV 64
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 283 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 338
>gi|45383173|ref|NP_989827.1| heterogeneous nuclear ribonucleoprotein H [Gallus gallus]
gi|33521618|gb|AAQ20009.1| heterogeneous nuclear ribonucleoprotein H1-like protein [Gallus
gallus]
Length = 519
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 131 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 190
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 191 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 249
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 250 KLMAMQRPGPYDRPG 264
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 75 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 133
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 352 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 407
>gi|327265516|ref|XP_003217554.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Anolis
carolinensis]
Length = 490
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 111 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 170
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 171 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 229
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 230 KLMAMQRPGPYDRPG 244
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I+ S+G+ + GRP+GEA+V+ +E + AL+K +E +GHRY+
Sbjct: 55 DEVQRFFSECKILNGSSGVRFIYTR-EGRPSGEAFVELETEEDVKSALKKDRETMGHRYV 113
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 325 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 380
>gi|281351805|gb|EFB27389.1| hypothetical protein PANDA_010030 [Ailuropoda melanoleuca]
Length = 472
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|148701752|gb|EDL33699.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Mus
musculus]
Length = 485
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 94 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 153
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 154 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 212
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 213 KLMAMQRPGPYDRPG 227
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 22 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 72
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 73 ELESEDEVKLALKKDRETMGHRYV 96
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 315 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 370
>gi|395504896|ref|XP_003756782.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sarcophilus
harrisii]
Length = 471
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 80 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 140 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 198
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 199 KLMAMQRPGPYDRPG 213
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 50 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 82
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 301 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 356
>gi|194219511|ref|XP_001497574.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Equus
caballus]
Length = 456
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 88 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 147
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 148 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 206
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 207 KLMAMQRPGPYDRPG 221
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 58 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 90
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 309 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 364
>gi|307176277|gb|EFN65908.1| Heterogeneous nuclear ribonucleoprotein H2 [Camponotus floridanus]
Length = 417
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 22/128 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G+ +E DD IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVVKRSGLNLENAMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY----IFFTGHRYTVQHRAP 110
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHR+ ++ G Y R+
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTETLYIAGFGYIEIFRSS 201
Query: 111 RCETSIPV 118
E +
Sbjct: 202 LSEVRASI 209
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF G ISNG V + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFF-GDCSISNGKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYI 85
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 312 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEAVKAMCKDKSHMSHRYI 365
>gi|441595654|ref|XP_003279600.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Nomascus leucogenys]
Length = 452
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|390459519|ref|XP_002744505.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Callithrix
jacchus]
Length = 472
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|397477061|ref|XP_003809903.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Pan paniscus]
gi|426351280|ref|XP_004043181.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Gorilla
gorilla gorilla]
Length = 452
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|355691923|gb|EHH27108.1| hypothetical protein EGK_17225 [Macaca mulatta]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL++ +E +GHRY+
Sbjct: 60 ELESEDEVKLALKEDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|26353116|dbj|BAC40188.1| unnamed protein product [Mus musculus]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|441595657|ref|XP_004087258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Nomascus leucogenys]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|354486518|ref|XP_003505427.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Cricetulus
griseus]
Length = 447
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 56 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 115
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ PR
Sbjct: 116 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHKNTPR 174
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 175 KLMAMQRPGPYDRPG 189
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 26 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 58
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 277 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 332
>gi|440897190|gb|ELR48939.1| Heterogeneous nuclear ribonucleoprotein H [Bos grunniens mutus]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|261859020|dbj|BAI46032.1| heterogeneous nuclear ribonucleoprotein H1 [synthetic construct]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|402873628|ref|XP_003919688.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Papio anubis]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|383417967|gb|AFH32197.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410224062|gb|JAA09250.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|351714959|gb|EHB17878.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 413
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 75/133 (56%), Gaps = 23/133 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCET 114
ITL DP G+ TGEA+VQF +E AE AL+KHKERIGHRYI + + R +
Sbjct: 140 ITLPVDP-EGKITGEAFVQFASQELAEKALRKHKERIGHRYI----EVFKSSQQEVRSYS 194
Query: 115 SIPVS-SSTHKPG 126
+P+ S +PG
Sbjct: 195 DLPLKFMSMQRPG 207
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 101
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 300 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEEAVPAMSKDRANMQHRYI 355
>gi|351714509|gb|EHB17428.1| Heterogeneous nuclear ribonucleoprotein H, partial [Heterocephalus
glaber]
Length = 444
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 53 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 112
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 113 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 171
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 172 KLMAMQRPGPYDRPG 186
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 23 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 55
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 274 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 329
>gi|126290596|ref|XP_001369385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Monodelphis
domestica]
Length = 449
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSECKI-QNGASGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|10946928|ref|NP_067485.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|46396669|sp|O35737.3|HNRH1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|2253041|emb|CAA74583.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|33604202|gb|AAH56224.1| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|37589940|gb|AAH42187.2| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|74149585|dbj|BAE36421.1| unnamed protein product [Mus musculus]
gi|148701754|gb|EDL33701.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_d [Mus
musculus]
gi|149052456|gb|EDM04273.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|148237217|ref|NP_001085008.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|47507485|gb|AAH70969.1| MGC78776 protein [Xenopus laevis]
Length = 441
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
++ RY+EVFK EMDW L+HTG +G K++I QFF GLEI+
Sbjct: 77 MAHRYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIV 136
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 137 PNGITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 180
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 6 TGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN-- 63
T E SD ++ V+ + + W H D+I FF +I +NG++ V +
Sbjct: 3 TSECSDGFV----VKVRGLPWSCSH--------DEIENFFSESKI-ANGLSGVHFIYTRE 49
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+F ++ +LA++K + + HRY+
Sbjct: 50 GRPSGEAFVEFETEDDLQLAVKKDRATMAHRYV 82
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 292 DIYTFFSPLNPVRVHIEIGAD---GRVTGEADVEFASHEDAVAAMSKDKANMQHRYV 345
>gi|431892769|gb|ELK03202.1| Heterogeneous nuclear ribonucleoprotein H [Pteropus alecto]
Length = 435
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSCS--------ADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 295 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 350
>gi|5031753|ref|NP_005511.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|300794637|ref|NP_001180163.1| heterogeneous nuclear ribonucleoprotein H [Bos taurus]
gi|381342476|ref|NP_001244222.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|73970381|ref|XP_857122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 19
[Canis lupus familiaris]
gi|109080078|ref|XP_001099955.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 7
[Macaca mulatta]
gi|114603795|ref|XP_001150460.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2 [Pan
troglodytes]
gi|291410134|ref|XP_002721348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Oryctolagus cuniculus]
gi|301771512|ref|XP_002921169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Ailuropoda melanoleuca]
gi|311249564|ref|XP_003123691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sus scrofa]
gi|348551747|ref|XP_003461691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Cavia
porcellus]
gi|403307005|ref|XP_003944005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Saimiri boliviensis boliviensis]
gi|403307007|ref|XP_003944006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Saimiri boliviensis boliviensis]
gi|410947937|ref|XP_003980698.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Felis catus]
gi|426228702|ref|XP_004008435.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Ovis aries]
gi|1710632|sp|P31943.4|HNRH1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|347314|gb|AAA91346.1| hnRNP H [Homo sapiens]
gi|12655001|gb|AAH01348.1| HNRPH1 protein [Homo sapiens]
gi|119574192|gb|EAW53807.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|119574193|gb|EAW53808.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|193784895|dbj|BAG54048.1| unnamed protein product [Homo sapiens]
gi|296486243|tpg|DAA28356.1| TPA: heterogeneous nuclear ribonucleoprotein H1 (H) [Bos taurus]
Length = 449
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|344265353|ref|XP_003404749.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Loxodonta
africana]
Length = 449
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SAEEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDDVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|395853398|ref|XP_003799198.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Otolemur garnettii]
gi|395853400|ref|XP_003799199.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Otolemur garnettii]
gi|395853402|ref|XP_003799200.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 3
[Otolemur garnettii]
Length = 449
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SAEEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|120538378|gb|AAI29088.1| Hnrph1 protein [Rattus norvegicus]
Length = 429
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|54020837|ref|NP_001005664.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus (Silurana)
tropicalis]
gi|49257786|gb|AAH74690.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Xenopus (Silurana)
tropicalis]
gi|89269950|emb|CAJ83715.1| hnrph1 [Xenopus (Silurana) tropicalis]
Length = 441
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 80 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 140 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 180
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQF 74
F V+ + + W H D+I FF +I +NG++ + + GRP+GEA+V+F
Sbjct: 10 FVVKVRGLPWSCSH--------DEIENFFSECKI-ANGLSGIHFIYTREGRPSGEAFVEF 60
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E +LAL+K + +GHRY+
Sbjct: 61 ETEEDLKLALKKDRATMGHRYV 82
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 292 DIYTFFSPLNPVRVHIEIGAD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 345
>gi|344246789|gb|EGW02893.1| Heterogeneous nuclear ribonucleoprotein H [Cricetulus griseus]
Length = 415
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 54 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 113
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ PR
Sbjct: 114 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHKNTPR 172
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 173 KLMAMQRPGPYDRPG 187
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 24 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 56
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 275 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 330
>gi|402911169|ref|XP_003918213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like, partial
[Papio anubis]
Length = 256
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>gi|119574194|gb|EAW53809.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_b [Homo
sapiens]
Length = 393
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSCS--------ADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|48145673|emb|CAG33059.1| HNRPH1 [Homo sapiens]
Length = 449
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 181
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|380792639|gb|AFE68195.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca mulatta]
Length = 269
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAPGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>gi|380029403|ref|XP_003698363.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Apis florea]
Length = 413
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 18/101 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G+ +E DD IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVVKRSGMNLENAMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHR+
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRW 182
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 309 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEAVKAMSKDKSHMSHRYI 362
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I + NG+ + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFFSDCSITNGKNGVHMTMSR-EGRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYI 85
>gi|340722803|ref|XP_003399791.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus terrestris]
gi|350424200|ref|XP_003493719.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus impatiens]
Length = 414
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 18/101 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G+ +E DD IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVVKRSGMNLENAMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHR+
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRW 182
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 310 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEAVKAMSKDKSHMSHRYI 363
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I + NG+ + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFFSDCSITNGKNGVHMTMSR-EGRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYI 85
>gi|148670393|gb|EDL02340.1| mCG50680 [Mus musculus]
Length = 338
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 64 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 104
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 225 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
>gi|391341907|ref|XP_003745268.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Metaseiulus occidentalis]
Length = 503
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 15/102 (14%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHT-------GIVEGK-------KDDIAQFFDGLEIISNG 54
+ +RYIEVF+ +R EM+W ++ + GIV + K++IA FF GLEI+ NG
Sbjct: 76 MGNRYIEVFRAKRAEMEWCMKKSSSNTLDEGIVRLRGIPFGCSKEEIANFFSGLEIVPNG 135
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I + D FNGR G+AYVQF KE AE AL+KHKERIGHRYI
Sbjct: 136 IVIPVD-FNGRTAGDAYVQFASKEAAEKALEKHKERIGHRYI 176
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DD+ QFFD + S T GRP+GE V+F A A++++ +G+RY+
Sbjct: 415 EDDVFQFFDPIRPASVRFTFDA---TGRPSGECDVEFASHRDAAEAMERNNAHMGNRYV 470
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPF--NGRPTGEAYVQFVD 76
VR + M W DD+ F + NG + + +GR +GEAYV+
Sbjct: 10 VRLRGMPWS--------STNDDVLNFLGSDVHVLNGKDGIHFTYTRDGRASGEAYVELES 61
Query: 77 KETAELALQKHKERIGHRYI 96
+ E AL+K E +G+RYI
Sbjct: 62 EPDVENALKKDNENMGNRYI 81
>gi|156550801|ref|XP_001600558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Nasonia
vitripennis]
Length = 563
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------------GIVEG-KKDDIAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ + G+ G K++IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVIKRSCLNLENVMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHRYI
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRYI 183
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF L IS I L GR +GEA V+F E A A+ K K + HRYI
Sbjct: 311 DIADFFRPLSPISIRIILEN---GGRASGEADVEFASHEEAVKAMSKDKSHMSHRYI 364
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I GI + GRP+GEAY++ +E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFFGDCSITHGKAGIHMTMSR-EGRPSGEAYIEMDSEEDIEKACKRDRDHMGHRYI 85
>gi|20073357|gb|AAH27003.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 64 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 104
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 225 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
>gi|20987708|gb|AAH29764.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 64 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 104
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 225 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
>gi|194383864|dbj|BAG59290.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 64 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 104
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 225 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
>gi|355705000|gb|EHH30925.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVSALPWSC--------SADEVMRFFSDRKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|62078769|ref|NP_001014041.1| heterogeneous nuclear ribonucleoprotein H2 [Rattus norvegicus]
gi|81910860|sp|Q6AY09.1|HNRH2_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|50927747|gb|AAH79240.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Rattus norvegicus]
gi|149055432|gb|EDM07016.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
gi|149055433|gb|EDM07017.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMTMQRPGPYDRPG 214
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +++ +FF +I NG + V + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SAEEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|335775266|gb|AEH58514.1| heterogeneous nuclear ribonucleoprotein-like protein [Equus
caballus]
Length = 337
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 64 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 104
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 225 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
>gi|147906713|ref|NP_001086923.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|50417963|gb|AAH77770.1| Hnrph2-prov protein [Xenopus laevis]
gi|84569955|gb|AAI10708.1| Hnrph2 protein [Xenopus laevis]
Length = 456
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG +G K++I QFF GLEI+ NG
Sbjct: 80 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 140 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 180
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQF 74
F V+ + + W H D+I FF +I +NG++ + + GRP+GEA+V+F
Sbjct: 10 FVVKVRGLPWSCSH--------DEIENFFSECKI-ANGLSGIHFIYTREGRPSGEAFVEF 60
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E +L L+K + +GHRY+
Sbjct: 61 ETEEDLKLGLKKDRATMGHRYV 82
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 292 DIYTFFSPLNPVRVHIEIGAD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 345
>gi|149755198|ref|XP_001493828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Equus
caballus]
gi|291393212|ref|XP_002713068.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Oryctolagus
cuniculus]
gi|291408077|ref|XP_002720410.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Oryctolagus cuniculus]
gi|281341597|gb|EFB17181.1| hypothetical protein PANDA_019663 [Ailuropoda melanoleuca]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|148688440|gb|EDL20387.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_b [Mus
musculus]
Length = 460
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 92 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 151
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 152 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 210
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 211 KLMTMQRPGPYDRPG 225
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +++ +FF +I NG + V + GRP+GEA+V
Sbjct: 20 EGFVVKVRGLPWSC--------SAEEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFV 70
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 71 ELESEDEVKLALKKDRETMGHRYV 94
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 313 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 368
>gi|74007970|ref|XP_861916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Canis lupus familiaris]
gi|345807788|ref|XP_862053.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 7
[Canis lupus familiaris]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|348570626|ref|XP_003471098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Cavia
porcellus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|9624998|ref|NP_062543.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|74099697|ref|NP_001027565.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|197100479|ref|NP_001125156.1| heterogeneous nuclear ribonucleoprotein H2 [Pongo abelii]
gi|302565696|ref|NP_001180922.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|350536397|ref|NP_001233423.1| heterogeneous nuclear ribonucleoprotein H2 [Pan troglodytes]
gi|109131568|ref|XP_001094080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Macaca mulatta]
gi|296236002|ref|XP_002763136.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Callithrix jacchus]
gi|332254772|ref|XP_003276506.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nomascus
leucogenys]
gi|390480025|ref|XP_003735831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Callithrix
jacchus]
gi|403298789|ref|XP_003940188.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403298791|ref|XP_003940189.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Saimiri boliviensis boliviensis]
gi|426396685|ref|XP_004064561.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Gorilla gorilla gorilla]
gi|426396687|ref|XP_004064562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Gorilla gorilla gorilla]
gi|426396689|ref|XP_004064563.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Gorilla gorilla gorilla]
gi|2500576|sp|P55795.1|HNRH2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=FTP-3; AltName:
Full=Heterogeneous nuclear ribonucleoprotein H';
Short=hnRNP H'
gi|75070864|sp|Q5RD26.1|HNRH2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1684915|gb|AAB64202.1| FTP3 [Homo sapiens]
gi|55727150|emb|CAH90331.1| hypothetical protein [Pongo abelii]
gi|119623269|gb|EAX02864.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660030|gb|AAI30346.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660336|gb|AAI30344.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|168277748|dbj|BAG10852.1| heterogeneous nuclear ribonucleoprotein H' [synthetic construct]
gi|313883006|gb|ADR82989.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|313883348|gb|ADR83160.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|343958876|dbj|BAK63293.1| heterogeneous nuclear ribonucleoprotein H' [Pan troglodytes]
gi|380812318|gb|AFE78033.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|384946774|gb|AFI36992.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410264162|gb|JAA20047.1| RPL36A-HNRNPH2 readthrough [Pan troglodytes]
gi|410303792|gb|JAA30496.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410303794|gb|JAA30497.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355365|gb|JAA44286.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355367|gb|JAA44287.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|426257857|ref|XP_004022538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Ovis aries]
gi|146231796|gb|ABQ12973.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|296471005|tpg|DAA13120.1| TPA: heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|440901707|gb|ELR52599.1| Heterogeneous nuclear ribonucleoprotein H2 [Bos grunniens mutus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|355694919|gb|AER99830.1| heteroproteinous nuclear ribonucleoprotein F [Mustela putorius
furo]
Length = 342
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 25 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 84
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 85 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 125
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 246 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 301
>gi|432101976|gb|ELK29797.1| Heterogeneous nuclear ribonucleoprotein H2 [Myotis davidii]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|395861473|ref|XP_003803009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Otolemur
garnettii]
Length = 432
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|417401138|gb|JAA47465.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|301788126|ref|XP_002929479.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Ailuropoda melanoleuca]
gi|344306831|ref|XP_003422087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Loxodonta africana]
Length = 432
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|431895711|gb|ELK05132.1| Heterogeneous nuclear ribonucleoprotein H2 [Pteropus alecto]
Length = 422
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 54 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 113
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 114 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 172
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 173 KLMAMQRPGPYDRPG 187
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 24 GRPSGEAFVELESEDEVKLALKKDRETMGHRYV 56
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 275 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 330
>gi|115496520|ref|NP_001069476.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|109892458|sp|Q3SZF3.1|HNRH2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|74354329|gb|AAI02895.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Bos taurus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|410989009|ref|XP_004000762.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Felis catus]
Length = 432
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|9845253|ref|NP_063921.1| heterogeneous nuclear ribonucleoprotein H2 [Mus musculus]
gi|354474917|ref|XP_003499676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Cricetulus griseus]
gi|354474919|ref|XP_003499677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Cricetulus griseus]
gi|46577330|sp|P70333.1|HNRH2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1666700|gb|AAB47243.1| Murine homolog of human ftp-3 [Mus musculus]
gi|13529467|gb|AAH05461.1| Hnrph2 protein [Mus musculus]
gi|26346655|dbj|BAC36976.1| unnamed protein product [Mus musculus]
gi|74139495|dbj|BAE40886.1| unnamed protein product [Mus musculus]
gi|74207684|dbj|BAE40087.1| unnamed protein product [Mus musculus]
gi|74211079|dbj|BAE37634.1| unnamed protein product [Mus musculus]
gi|148688439|gb|EDL20386.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|148688441|gb|EDL20388.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|344238071|gb|EGV94174.1| Heterogeneous nuclear ribonucleoprotein H2 [Cricetulus griseus]
Length = 449
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMTMQRPGPYDRPG 214
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +++ +FF +I NG + V + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SAEEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|62510677|sp|Q60HC3.3|HNRPF_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|52782291|dbj|BAD51992.1| heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
Length = 415
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|351714958|gb|EHB17877.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 414
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 140 ITLPVDP-KGKITGEAFVQFASQELAEKALWKHKERIGHRYI 180
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 101
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 301 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 356
>gi|332244100|ref|XP_003271210.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Nomascus leucogenys]
gi|332244102|ref|XP_003271211.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Nomascus leucogenys]
gi|332244104|ref|XP_003271212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Nomascus leucogenys]
Length = 415
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|431914602|gb|ELK15790.1| Heterogeneous nuclear ribonucleoprotein F [Pteropus alecto]
Length = 414
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +D+ F G II +G T + + GR +GEA+V
Sbjct: 9 EGFVVKLRGLPWSC--------SVEDVQNFLSGC-IIHDGATGIHFIYTREGRQSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 60 ELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|417400513|gb|JAA47194.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 414
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W +D+ F G II +G+ + + GR +GEA+V
Sbjct: 9 EGFVVKLRGLPWSC--------SVEDVQNFLSGC-IIHDGVAGIHFIYTREGRQSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 60 ELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|384946772|gb|AFI36991.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|19527048|ref|NP_598595.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|25742579|ref|NP_071792.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546815|ref|NP_001032362.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546817|ref|NP_001032363.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546819|ref|NP_001032364.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|261878597|ref|NP_001159899.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878599|ref|NP_001159900.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878601|ref|NP_001159901.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878603|ref|NP_001159902.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878605|ref|NP_001159903.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878607|ref|NP_001159904.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|81911895|sp|Q794E4.3|HNRPF_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|81918016|sp|Q9Z2X1.3|HNRPF_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|4153896|dbj|BAA37095.1| ribonucleoprotein F [Rattus norvegicus]
gi|17390408|gb|AAH18185.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|19343662|gb|AAH25481.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|22137695|gb|AAH29163.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|23274049|gb|AAH33483.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|66911957|gb|AAH97275.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|73909045|gb|AAI03635.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|148667168|gb|EDK99584.1| mCG133010, isoform CRA_a [Mus musculus]
gi|149049635|gb|EDM02089.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049636|gb|EDM02090.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049637|gb|EDM02091.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049638|gb|EDM02092.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049639|gb|EDM02093.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049640|gb|EDM02094.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
Length = 415
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|296220055|ref|XP_002756146.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Callithrix jacchus]
gi|403276785|ref|XP_003930066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Saimiri boliviensis boliviensis]
gi|403276787|ref|XP_003930067.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Saimiri boliviensis boliviensis]
Length = 415
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|4826760|ref|NP_004957.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470397|ref|NP_001091678.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470400|ref|NP_001091677.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470402|ref|NP_001091675.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470404|ref|NP_001091674.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470406|ref|NP_001091676.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|350537293|ref|NP_001233466.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|386781898|ref|NP_001247944.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|297686319|ref|XP_002820702.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Pongo abelii]
gi|297686321|ref|XP_002820703.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Pongo abelii]
gi|297686325|ref|XP_002820705.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Pongo abelii]
gi|297686327|ref|XP_002820706.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Pongo abelii]
gi|297686329|ref|XP_002820707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Pongo abelii]
gi|297686331|ref|XP_002820708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Pongo abelii]
gi|297686333|ref|XP_002820709.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Pongo abelii]
gi|297686337|ref|XP_002820711.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pongo abelii]
gi|297686339|ref|XP_002820712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pongo abelii]
gi|297686341|ref|XP_002820713.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pongo abelii]
gi|297686343|ref|XP_002820714.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pongo abelii]
gi|297686345|ref|XP_002820715.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Pongo abelii]
gi|395741477|ref|XP_003777588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|395741481|ref|XP_003777589.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|397491662|ref|XP_003816768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1 [Pan
paniscus]
gi|397491664|ref|XP_003816769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2 [Pan
paniscus]
gi|397491666|ref|XP_003816770.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3 [Pan
paniscus]
gi|397491668|ref|XP_003816771.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4 [Pan
paniscus]
gi|397491670|ref|XP_003816772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Pan
paniscus]
gi|397491672|ref|XP_003816773.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6 [Pan
paniscus]
gi|397491674|ref|XP_003816774.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7 [Pan
paniscus]
gi|397491676|ref|XP_003816775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8 [Pan
paniscus]
gi|397491678|ref|XP_003816776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9 [Pan
paniscus]
gi|397491680|ref|XP_003816777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pan paniscus]
gi|397491682|ref|XP_003816778.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pan paniscus]
gi|397491684|ref|XP_003816779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pan paniscus]
gi|397491686|ref|XP_003816780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pan paniscus]
gi|426364503|ref|XP_004049345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Gorilla gorilla gorilla]
gi|426364505|ref|XP_004049346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Gorilla gorilla gorilla]
gi|426364507|ref|XP_004049347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Gorilla gorilla gorilla]
gi|426364509|ref|XP_004049348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Gorilla gorilla gorilla]
gi|1710628|sp|P52597.3|HNRPF_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; AltName: Full=Nucleolin-like protein
mcs94-1; Contains: RecName: Full=Heterogeneous nuclear
ribonucleoprotein F, N-terminally processed
gi|452048|gb|AAC37584.1| HnRNP F protein [Homo sapiens]
gi|12655155|gb|AAH01432.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|13279032|gb|AAH04254.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|15990432|gb|AAH15580.1| HNRPF protein [Homo sapiens]
gi|67967777|dbj|BAE00371.1| unnamed protein product [Macaca fascicularis]
gi|76780063|gb|AAI06009.1| HNRPF protein [Homo sapiens]
gi|119607001|gb|EAW86595.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607002|gb|EAW86596.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607003|gb|EAW86597.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607004|gb|EAW86598.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607005|gb|EAW86599.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|123997411|gb|ABM86307.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|157929032|gb|ABW03801.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|168277548|dbj|BAG10752.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|193785530|dbj|BAG50896.1| unnamed protein product [Homo sapiens]
gi|343959614|dbj|BAK63664.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|355562388|gb|EHH18982.1| Heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|355782737|gb|EHH64658.1| Heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
gi|380785399|gb|AFE64575.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|384946770|gb|AFI36990.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|410262002|gb|JAA18967.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262004|gb|JAA18968.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262006|gb|JAA18969.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262008|gb|JAA18970.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299574|gb|JAA28387.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299576|gb|JAA28388.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299578|gb|JAA28389.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299580|gb|JAA28390.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299582|gb|JAA28391.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340859|gb|JAA39376.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340861|gb|JAA39377.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340863|gb|JAA39378.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340865|gb|JAA39379.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340867|gb|JAA39380.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340869|gb|JAA39381.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
Length = 415
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|194042674|ref|XP_001929089.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Sus
scrofa]
gi|335301642|ref|XP_003359253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
gi|350592730|ref|XP_003483523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
Length = 414
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F + A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHDEAVAAMSKDRANMQHRYI 357
>gi|73997922|ref|XP_848697.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Canis lupus familiaris]
gi|73997926|ref|XP_856894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Canis lupus familiaris]
gi|73997930|ref|XP_856973.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Canis lupus familiaris]
gi|301763831|ref|XP_002917330.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Ailuropoda melanoleuca]
gi|301763833|ref|XP_002917331.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 2
[Ailuropoda melanoleuca]
gi|301763835|ref|XP_002917332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 3
[Ailuropoda melanoleuca]
gi|301763837|ref|XP_002917333.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 4
[Ailuropoda melanoleuca]
gi|410975641|ref|XP_003994239.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Felis catus]
gi|410975643|ref|XP_003994240.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Felis catus]
gi|410975645|ref|XP_003994241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Felis catus]
gi|281338546|gb|EFB14130.1| hypothetical protein PANDA_005550 [Ailuropoda melanoleuca]
Length = 414
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|149690626|ref|XP_001490069.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Equus caballus]
gi|338717722|ref|XP_003363688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Equus
caballus]
Length = 414
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+++ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 51 GRQSGEAFIELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|291412565|ref|XP_002722547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Oryctolagus cuniculus]
Length = 415
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|383858866|ref|XP_003704920.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Megachile rotundata]
Length = 412
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 18/101 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G +E DD IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVVKRSGFNLENAMDDACVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGHR+
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRW 182
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 307 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEAMKAMSKDKSHMSHRYI 360
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I SNG V + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFFSDCSI-SNGKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYI 85
>gi|58476100|gb|AAH89313.1| Hnrpf protein [Mus musculus]
Length = 395
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 61 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 120
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 121 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 161
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 31 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 87
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 282 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 337
>gi|351699543|gb|EHB02462.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 372
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 140 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 180
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 101
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 259 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 314
>gi|18266700|ref|NP_543172.1| heterogeneous nuclear ribonucleoprotein H [Rattus norvegicus]
gi|18104446|gb|AAL59557.1| Ratsg1 [Rattus norvegicus]
Length = 372
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G +++I QFF GLEI+ NG
Sbjct: 4 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 64 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 122
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 123 KLMAMQRPGPYDRPG 137
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + +E +GR TGEA V+F E A A+ K K + HRY+
Sbjct: 225 ENDIYNFFSPLNPVR---VHIETGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 280
>gi|348560746|ref|XP_003466174.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cavia
porcellus]
Length = 414
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 140 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 180
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 101
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 301 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 356
>gi|26345420|dbj|BAC36361.1| unnamed protein product [Mus musculus]
Length = 421
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|148886840|sp|Q8VHV7.2|HNRH1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName:
Full=Heterogeneous nuclear ribonucleoprotein H,
N-terminally processed
Length = 449
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G +++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + +E +GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPVR---VHIETGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 357
>gi|405952153|gb|EKC19997.1| Heterogeneous nuclear ribonucleoprotein H [Crassostrea gigas]
Length = 544
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 18/110 (16%)
Query: 4 CRTGEVSDRYIEVFKVRRQEMDWKLQHTG----------IVEGK-------KDDIAQFFD 46
C + +RYIEVF+ ++ EMDW ++ G +V + K++IAQFF
Sbjct: 105 CHNKHMGNRYIEVFRSKKSEMDWVIKRAGPGQMPGSCEAVVRLRGLPFGCSKEEIAQFFT 164
Query: 47 GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GLEI+ NGI L ED GR TGEAYVQF +E AE AL KHKERIGHRYI
Sbjct: 165 GLEIVPNGIMLPEDR-QGRSTGEAYVQFASQEIAEKALSKHKERIGHRYI 213
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPF--NGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+ DIA FF L + VE F NGRPTGEA V F A A+ +HK+ + HRY
Sbjct: 402 ESDIADFFSPLTPVR-----VEFEFAPNGRPTGEANVDFKTHSDAVEAMSRHKKNMQHRY 456
Query: 96 I 96
I
Sbjct: 457 I 457
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + +V+ +D+ + DG + + T + GRP+GE +V+ +D++
Sbjct: 44 VRLRGLPWSATESEVVKFFGEDV-EIVDGEQGVH--FTFSRE---GRPSGECFVELIDED 97
Query: 79 TAELALQKHKERIGHRYI 96
+ L+ H + +G+RYI
Sbjct: 98 NVQRGLKCHNKHMGNRYI 115
>gi|344274318|ref|XP_003408964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Loxodonta africana]
Length = 414
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIMPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 140 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 180
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ +E ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 50 GRQSGEAFVELESEEDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 101
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 301 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 356
>gi|402880032|ref|XP_003903619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Papio anubis]
gi|402880034|ref|XP_003903620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Papio anubis]
gi|402880036|ref|XP_003903621.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Papio anubis]
gi|402880038|ref|XP_003903622.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Papio anubis]
gi|402880040|ref|XP_003903623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Papio anubis]
gi|402880042|ref|XP_003903624.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Papio anubis]
gi|402880044|ref|XP_003903625.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Papio anubis]
gi|402880046|ref|XP_003903626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Papio anubis]
gi|402880048|ref|XP_003903627.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9
[Papio anubis]
gi|402880050|ref|XP_003903628.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Papio anubis]
gi|402880052|ref|XP_003903629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Papio anubis]
gi|402880054|ref|XP_003903630.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Papio anubis]
gi|402880056|ref|XP_003903631.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Papio anubis]
gi|402880058|ref|XP_003903632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Papio anubis]
Length = 415
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|62460420|ref|NP_001014860.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|426255584|ref|XP_004021428.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Ovis aries]
gi|426255586|ref|XP_004021429.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Ovis aries]
gi|426255588|ref|XP_004021430.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Ovis aries]
gi|75070041|sp|Q5E9J1.3|HNRPF_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|59858223|gb|AAX08946.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|74355042|gb|AAI02956.1| Heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|296472206|tpg|DAA14321.1| TPA: heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|440903473|gb|ELR54126.1| Heterogeneous nuclear ribonucleoprotein F, partial [Bos grunniens
mutus]
Length = 414
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 102
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|348534060|ref|XP_003454521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 401
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 78/148 (52%), Gaps = 29/148 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE-----------------GKKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+ +G + K++I QFF GL I+ NG
Sbjct: 78 RYIEVFKSNRSEMDWVLKRSGPADYDSCSGCMLRLRGLPFGCSKEEIVQFFSGLRIVPNG 137
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI F R ++ + PR
Sbjct: 138 ITLPVD-YQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEIRAYYEVPR 196
Query: 112 CETSIPVSSSTHKPGRHH--TLDGPNGG 137
+PG + + GP GG
Sbjct: 197 ------RGMGAQRPGPYDRPMMSGPRGG 218
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
E + VR + + W +D++A FF +I+ NG+ GRP+GEA++
Sbjct: 6 EGYVVRIRGLPWSCT--------QDEVASFFSDCDIVGKVNGVCFTYSK-EGRPSGEAFI 56
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ E + AL K ++ +GHRYI
Sbjct: 57 ELKTAEDFKNALAKDRKYMGHRYI 80
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA+FF L + I + NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 309 DIAKFFSPLNPLRIHIDMAP---NGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYI 362
>gi|60098931|emb|CAH65296.1| hypothetical protein RCJMB04_15n19 [Gallus gallus]
Length = 499
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+ VFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 111 RYVVVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 170
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 171 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 229
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 230 KLMAMQRPGPYDRPG 244
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 55 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 113
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 332 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 387
>gi|159155917|gb|AAI54577.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG----------IVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG +V + K++I QFF GLEI+ NG
Sbjct: 77 RYVEVFKSNSVEMDWVLKHTGPNCPDTGGDGLVRLRGLPFGCSKEEIVQFFAGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI
Sbjct: 137 ITLPVD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYI 177
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQ 73
E F VR + + W D++ +FF +I SNG ++ GRP+GEA+V+
Sbjct: 5 EGFVVRVRGLPWSC--------SVDEVQRFFSECKIASNGTSIHFTYTREGRPSGEAFVE 56
Query: 74 FVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRC 112
F +E + A++K +E +GHRY+ F + + ++H P C
Sbjct: 57 FESEEDLKSAVKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNC 100
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + + + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 266 DIYNFFSPLNPVRVHLEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 319
>gi|45387779|ref|NP_991247.1| heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
gi|41107558|gb|AAH65439.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG----------IVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG +V + K++I QFF GLEI+ NG
Sbjct: 77 RYVEVFKSNSVEMDWVLKHTGPNCPETGGDGLVRLRGLPFGCSKEEIVQFFAGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI
Sbjct: 137 ITLPVD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYI 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQ 73
E F VR + + W D++ +FF +I SNG ++ GRP+GEA+V+
Sbjct: 5 EGFVVRVRGLPWSC--------SVDEVQRFFSECKIASNGTSIHFTYTREGRPSGEAFVE 56
Query: 74 FVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRC 112
F +E ++A++K +E +GHRY+ F + + ++H P C
Sbjct: 57 FESEEDLKIAVKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNC 100
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + + + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 266 DIYNFFSPLNPVRVHLEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 319
>gi|16876910|gb|AAH16736.1| HNRPF protein [Homo sapiens]
Length = 415
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVF+ R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFRSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFRSHRTEMDWVLKHSGPNSADS 107
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|355757549|gb|EHH61074.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca fascicularis]
Length = 449
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G ++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSNEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|395736587|ref|XP_003780726.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Pongo abelii]
Length = 430
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+E FK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 82 RYVEGFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 141
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 142 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 200
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 201 KLMAMQRPGPYDRPG 215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPT 67
+DR E F V+ + + W D++ +FF +I NG + + GRP+
Sbjct: 5 TDRSGEGFVVKVRGLPWSC--------SADEVQRFFSDCKI-QNGAQGIRFIYTREGRPS 55
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 56 GEAFVELESEDEVKLALKKDRETMGHRYV 84
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 303 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 358
>gi|148667170|gb|EDK99586.1| mCG133010, isoform CRA_c [Mus musculus]
Length = 187
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|410912106|ref|XP_003969531.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 371
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE-----------------GKKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+ +G + K++I QFF GL I+ NG
Sbjct: 78 RYIEVFKSNRSEMDWVLKRSGPADYDSCSGCTLRLRGLPFGCSKEEIVQFFSGLRIVPNG 137
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 138 ITLPVD-YQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYI 178
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 38 KDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
++++A FF +II NG+ GRP+GEA+++ E + AL K ++ +GHRY
Sbjct: 21 QEEVAGFFSDCDIIGKVNGVCFTYSK-EGRPSGEAFIELKTAEDFKNALAKDRKYMGHRY 79
Query: 96 I 96
I
Sbjct: 80 I 80
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF L + I NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 278 DVAKFFSPLNPLRVHIDFAP---NGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYI 331
>gi|322801457|gb|EFZ22118.1| hypothetical protein SINV_07549 [Solenopsis invicta]
Length = 425
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 18/99 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-VEGKKDD----------------IAQFFDGLEIISNG 54
RYIEVFK +R EM+W ++ +G+ +E DD IAQFF GLEI+ NG
Sbjct: 83 RYIEVFKAKRGEMEWVVKRSGLNLENAMDDGCVRLRGLPFGCSKEEIAQFFSGLEILPNG 142
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
I+L D + GR TGEAYVQFV+K+ AE ALQKHKE+IGH
Sbjct: 143 ISLPTD-YTGRSTGEAYVQFVNKDVAERALQKHKEKIGH 180
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF +E ++ I L GRP+GEA V+F E A A+ K K + HRYI
Sbjct: 348 DIADFFRPIEPVNVRIILEN---GGRPSGEADVEFATHEEALKAMCKDKSHMSHRYI 401
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+I +FF I + NG+ + GRP+GEAYV+ E E A ++ ++ +GHRYI
Sbjct: 27 DEIMKFFGDCSISNGKNGVHMTTSR-EGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYI 85
>gi|126328016|ref|XP_001371380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 468
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HT G V + K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNIEMDWVLKHTAPNSLDTASDGFVRLRGLPFRCNKEEIVQFFSGLEIMPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR +GEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 141 ITLPVD-FQGRNSGEAFVQFASQEIAEKALKKHKERIGHRYI 181
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W + DI QFF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSCSAS--------DIQQFFSECKI-QNGAAGIHFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
+ ++ LAL+K +E +GHRY+ F + + ++H AP
Sbjct: 60 ELESEDEVTLALKKDRETMGHRYVEVFKSNNIEMDWVLKHTAP 102
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L+ + I + D GR TGEA V+F E A A+ K K + HRYI
Sbjct: 297 ENDICDFFSPLKPVGAYIEIGSD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYI 352
>gi|148707962|gb|EDL39909.1| mCG129396 [Mus musculus]
Length = 415
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 62/101 (61%), Gaps = 18/101 (17%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNGI 55
YIEVFK R EMDW L+H+G K++I QFF GLEI+ NGI
Sbjct: 82 YIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGI 141
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 142 TLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
G +GEA+V+ ++ +LAL+K +E +GH YI F HR + ++H P S
Sbjct: 51 GSQSGEAFVELESEDDVKLALKKDRESMGHPYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 1 MGHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVE 59
+ +C +G RY + + ++ G+ + ++DI FF + I +
Sbjct: 264 LSYCLSGMYDHRYGDSEFTVQSTTGHRVHMRGLPYKATENDIYNFFSPFNPVRVHIEIGP 323
Query: 60 DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 324 D---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|432852531|ref|XP_004067294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 398
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 61/102 (59%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE-----------------GKKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+ G + K++I QFF GL I+ NG
Sbjct: 78 RYIEVFKSNRSEMDWVLKRNGPADYDSCSGCMLRLRGLPFGCSKEEIVQFFSGLRIVPNG 137
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 138 ITLPVD-YQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYI 178
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
E + VR + + W ++++A FF +I+ NG+ GRP+GEA++
Sbjct: 6 EGYVVRIRGLPWSCT--------QEEVASFFSDCDIMGKINGVCFTYSK-EGRPSGEAFL 56
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ E + AL K ++ +GHRYI
Sbjct: 57 ELKTAEDFKNALAKDRKYMGHRYI 80
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF L + I + NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 310 DVAKFFSPLIPLRVHIDVAP---NGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYI 363
>gi|291243063|ref|XP_002741419.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Saccoglossus kowalevskii]
Length = 628
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI-----------VEG-----KKDDIAQFFDGLEIISNGI 55
RY+EVF+ ++ EMDW ++ +G + G K++IAQFF GLEI++NGI
Sbjct: 165 RYVEVFRSKKSEMDWVIKRSGPNAVQDNDGCVRLRGLPFGCSKEEIAQFFGGLEIVANGI 224
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL D ++GR TGEAYVQF K+ AE AL KHKERIGHRYI
Sbjct: 225 TLPTD-YHGRSTGEAYVQFSTKDIAENALGKHKERIGHRYI 264
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEI--ISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ FF G +I NGI GRP+GE +++ +E ++AL++H + +GHRY+
Sbjct: 109 DEVRSFFKGCKIAETENGIKFTYTR-EGRPSGECFIELETEEDVKVALERHNDHMGHRYV 167
>gi|291190682|ref|NP_001167168.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
gi|223648432|gb|ACN10974.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
Length = 396
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 23/150 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW ++H+G + K++I QF GLEI+ NG
Sbjct: 77 RYVEVFKSNNVEMDWVMKHSGPNSPETTGDGLVRLRGLPFGCSKEEIVQFLSGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP-R 111
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI F R V+ H P R
Sbjct: 137 ITLPLD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQR 195
Query: 112 CETSIPVSSSTHKP--GRHHTLDGPNGGGT 139
+ +P GR + + G GGG+
Sbjct: 196 KPMGMQRPGPYDRPSGGRGYNMMGGRGGGS 225
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQ 73
E + VR + + W D++ +FF +I +NG ++ GRP+GEA+V+
Sbjct: 5 EGYVVRVRGLPWSCS--------VDEVRRFFSDCKIANNGTSIHFTSTREGRPSGEAFVE 56
Query: 74 FVDKETAELALQKHKERIGHRYI 96
+++ ++A++K +E +GHRY+
Sbjct: 57 LENEDDLKIAVKKDRETMGHRYV 79
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + + + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 271 DIYNFFSPLNPVRVHVEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 324
>gi|397478241|ref|XP_003810461.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Pan
paniscus]
Length = 314
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 76/135 (56%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRY F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYTEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSCS--------ADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
>gi|260834915|ref|XP_002612455.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
gi|229297832|gb|EEN68464.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
Length = 411
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 20/130 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG---IVEG-----------KKDDIAQFFDGLEIISNGITL 57
RYIEVF+ + EM+W ++H+G + +G K++IAQFF GLEI+ NGITL
Sbjct: 74 RYIEVFRSKVSEMEWVVKHSGQDQVNDGIVRLRGLPFGCSKEEIAQFFSGLEIVPNGITL 133
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPRCETSI 116
D + GR TGEA+VQF ++ AE AL KHKE+IGHRYI F R V+ C +
Sbjct: 134 PTD-YQGRSTGEAFVQFTSQDIAEKALGKHKEKIGHRYIEIFKSSRNEVR----ECMSPK 188
Query: 117 PVSSSTHKPG 126
P + +PG
Sbjct: 189 PRPLMSSRPG 198
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GRP+GEA+V+ E E AL KH + +GHRYI
Sbjct: 44 GRPSGEAFVEVETSEDFEKALAKHNQHMGHRYI 76
>gi|427789699|gb|JAA60301.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 411
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF GLEI+
Sbjct: 79 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGLEIV 138
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D + GR TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 139 PNGITLPTD-YQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 182
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAY 71
E F +R + + W K++I FF E I GI V + GRP+GEAY
Sbjct: 8 EGFVLRIRGLPWST--------TKEEILNFFTSKECHIKGGINGVHMTLSREGRPSGEAY 59
Query: 72 VQFVDKETAELALQKHKERIGHRYI 96
++ ++ E+ LQ+H E IGHRYI
Sbjct: 60 IELESEQDMEIGLQRHNEHIGHRYI 84
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF + I N + ED +GRP+GE V+F E A A+ K K + HRYI
Sbjct: 278 DIFEFFQPMNPI-NVHLIYED--SGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYI 331
>gi|395851365|ref|XP_003798231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 415
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 75/140 (53%), Gaps = 26/140 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I FF GLEI+ NG
Sbjct: 80 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVLFFTGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCET 114
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI + R +
Sbjct: 140 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI----EVFKSSQEEVRSYS 194
Query: 115 SIPVS-SSTHKPG---RHHT 130
+P+ S +PG RH T
Sbjct: 195 DLPLKFMSVQRPGPYDRHGT 214
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P S
Sbjct: 50 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 106
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 302 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
>gi|351712921|gb|EHB15840.1| Heterogeneous nuclear ribonucleoprotein H2 [Heterocephalus glaber]
Length = 416
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHR++ F R V+ + PR
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRHVEIFKSSRAEVRTHYDPPR 199
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 200 KLMAMQRPGPYDRPG 214
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSCS--------ADEVMRFFSDCKI-QNGTAGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 302 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 357
>gi|346473523|gb|AEO36606.1| hypothetical protein [Amblyomma maculatum]
Length = 412
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF GLEI+
Sbjct: 79 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGLEIV 138
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D + GR TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 139 PNGITLPTD-YQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 182
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAY 71
E F +R + + W K++I FF E I GI V + GRP+GEAY
Sbjct: 8 EGFVLRIRGLPWST--------TKEEILNFFTSKECNIKGGINGVHMTLSREGRPSGEAY 59
Query: 72 VQFVDKETAELALQKHKERIGHRYI 96
++ ++ E+ LQ+H E IGHRYI
Sbjct: 60 IELESEQDVEVGLQRHNEHIGHRYI 84
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF + + N + ED +GRP+GE V+F E A A+ K K + HRYI
Sbjct: 278 DIFEFFQPMNPV-NVHLIYED--SGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYI 331
>gi|346465413|gb|AEO32551.1| hypothetical protein [Amblyomma maculatum]
Length = 434
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF GLEI+
Sbjct: 102 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGLEIV 161
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D + GR TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 162 PNGITLPTD-YQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAY 71
E F +R + + W K++I FF E I GI V + GRP+GEAY
Sbjct: 31 EGFVLRIRGLPWST--------TKEEILNFFTSKECHIKGGINGVHMTLSREGRPSGEAY 82
Query: 72 VQFVDKETAELALQKHKERIGHRYI 96
++ ++ E+ LQ+H E IGHRYI
Sbjct: 83 IELESEQDVEIGLQRHNEHIGHRYI 107
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF + + N + ED +GRP+GE V+F E A A+ K K + HRYI
Sbjct: 301 DIFEFFQPMNPV-NVHFIYED--SGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYI 354
>gi|410041428|ref|XP_003950996.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pan troglodytes]
Length = 442
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 64/102 (62%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW +HTG+ + G K++I FF GLEI+ NG
Sbjct: 78 RYVEVFKSNSVEMDWVSKHTGLNSPDTANDGFVWLRGLPFGCXKEEIVHFFSGLEIVPNG 137
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR TGEA+VQ +E AE+AL+KH+ERIGHRYI
Sbjct: 138 ITLXVD-FQGRSTGEAFVQLASQEIAEMALKKHRERIGHRYI 178
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD-GLEIISNGITLVEDPFNGRPTGEAYVQ 73
E F V+ Q + W D++ F D ++ ++GI + GRP+GEA+V+
Sbjct: 8 EGFVVKVQGLSWSC--------SADEVMHFSDCKIQNGTSGICFIYTG-EGRPSGEAFVE 58
Query: 74 FVDKETAELALQKHKERIGHRYI 96
+ A+LA K +E +GHRY+
Sbjct: 59 LESADEAKLA-XKDRETMGHRYV 80
>gi|325303152|tpg|DAA34329.1| TPA_inf: splicing factor hnRNP-F [Amblyomma variegatum]
Length = 231
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF GLEI+
Sbjct: 79 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGLEIV 138
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D + GR TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 139 PNGITLPTD-YQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 182
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 38 KDDIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K++I FF E I GI V + GRP+GEAY++ ++ E+ LQ+H E IGHR
Sbjct: 23 KEEILNFFTAKECHIKGGINGVHMTLSREGRPSGEAYIELESEQDMEIGLQRHNEHIGHR 82
Query: 95 YI 96
YI
Sbjct: 83 YI 84
>gi|432879057|ref|XP_004073431.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 413
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG----------IVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW ++HTG +V + K++I QFF GLEI+ NG
Sbjct: 76 RYVEVFKSNNVEMDWVMKHTGPNCPETAGDGLVRLRGLPFGCSKEEIVQFFSGLEIVPNG 135
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D GR TGEA+VQF ++ AE AL+KHKERIGHRYI
Sbjct: 136 ITLPVD-IQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYI 176
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
D++ +FF G +I++NG + GRP+GEA+V+ +E ++A++K +E +GHRY+
Sbjct: 20 DEVQRFFSGCKILNNGSGIHFTYTREGRPSGEAFVEMETEEDLKVAVKKDRETMGHRYVE 79
Query: 97 FFTGHR----YTVQHRAPRC 112
F + + ++H P C
Sbjct: 80 VFKSNNVEMDWVMKHTGPNC 99
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 274 DIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 327
>gi|348516774|ref|XP_003445912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 406
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 72/119 (60%), Gaps = 20/119 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG----------IVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVFK EMDW ++HTG +V + K++I QFF GLEI+ NG
Sbjct: 76 RYVEVFKSNNVEMDWVMKHTGPNCPETAGDGLVRLRGLPFGCSKEEIVQFFSGLEIVPNG 135
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAPR 111
ITL D GR TGEA+VQF ++ AE AL+KHKERIGHRYI F R V+ H P+
Sbjct: 136 ITLPVD-IQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQ 193
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
D++ +FF +I++NG + GRP+GEA+V+F +E ++A++K +E +GHRY+
Sbjct: 20 DEVQRFFSDCKILNNGSGIHFTYTREGRPSGEAFVEFETEEDLKIAVKKDRETMGHRYVE 79
Query: 97 FFTGHR----YTVQHRAPRC 112
F + + ++H P C
Sbjct: 80 VFKSNNVEMDWVMKHTGPNC 99
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 268 DIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 321
>gi|410914042|ref|XP_003970497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 406
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW ++HTG + G K++I QFF GLEI+ NG
Sbjct: 76 RYVEVFKSNNVEMDWVMKHTGPNCPGTAGDGLIRLRGLPFGCSKEEIVQFFSGLEIVPNG 135
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D GR TGEA+VQF ++ AE AL+KHKERIGHRYI
Sbjct: 136 ITLPVD-IQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYI 176
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
D++ +FF G +II+NG + GRP+GEA+V+ +E ++A++K +E +GHRY+
Sbjct: 20 DEVQRFFSGCKIINNGGAIHFTYTREGRPSGEAFVEMESEEDLKVAVKKDRETMGHRYVE 79
Query: 97 FFTGHR----YTVQHRAPRC 112
F + + ++H P C
Sbjct: 80 VFKSNNVEMDWVMKHTGPNC 99
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 268 DIYNFFSPLNPVRVHIEVGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 321
>gi|188528963|ref|NP_001120907.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus
(Silurana) tropicalis]
gi|183986477|gb|AAI66302.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQH--TGIVEG---------------KKDDIAQFFDGLEIISNG 54
RYIEVFK EM+W L+H TG V+ K++I QFF GL I+ NG
Sbjct: 75 RYIEVFKSNNTEMEWVLKHNSTGDVDTASDGTVRLRGLPFGCSKEEIVQFFSGLRIVPNG 134
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 135 ITLTVD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 175
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ DIA FF L I I + D GR TGEA V+F E A A+ K K + HRYI
Sbjct: 295 ESDIANFFSPLTPIRVHIDVGAD---GRATGEADVEFATHEDAVAAMSKDKNNMQHRYI 350
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQF 74
F VR + + W K+++ +FF II +GI GRP+GEA++
Sbjct: 5 FIVRVRGLPWSCT--------KEEVLEFFSECSIIEGVSGIHFTTSK-EGRPSGEAFIIL 55
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E + AL+K ++ +GHRYI
Sbjct: 56 DTEEDLKKALEKDRKYMGHRYI 77
>gi|197246805|gb|AAI68807.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 413
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQH--TGIVEG---------------KKDDIAQFFDGLEIISNG 54
RYIEVFK EM+W L+H TG V+ K++I QFF GL I+ NG
Sbjct: 75 RYIEVFKSNNTEMEWVLKHNSTGDVDTASDGTVRLRGLPFGCSKEEIVQFFSGLRIVPNG 134
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 135 ITLTVD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 175
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ DIA FF L I I + D GR TGEA V+F E A A+ K K + HRYI
Sbjct: 295 ESDIANFFSPLTPIRVHIDVGAD---GRATGEADVEFATHEDAVAAMSKDKNNMQHRYI 350
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQF 74
F VR + + W K+++ +FF II +GI GRP+GEA++
Sbjct: 5 FIVRVRGLPWSCT--------KEEVLEFFSECSIIEGVSGIHFTTSK-EGRPSGEAFIIL 55
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E + AL+K ++ +GHRYI
Sbjct: 56 DTEEDLKKALEKDRKYMGHRYI 77
>gi|442755167|gb|JAA69743.1| Putative splicing factor hnrnp-f [Ixodes ricinus]
Length = 279
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ N
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNR 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ F G II +G++ + + GR +GEA+V+ ++ ++AL+K +ER+GHRYI
Sbjct: 25 EDVQNFLSGC-IIHDGVSGIHFIYTREGRQSGEAFVELESEDDVKMALKKDRERMGHRYI 83
Query: 97 -FFTGHR----YTVQHRAP 110
F HR + ++H P
Sbjct: 84 EVFKSHRTEMDWVLKHSGP 102
>gi|148233462|ref|NP_001087973.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus laevis]
gi|52138903|gb|AAH82630.1| LOC494658 protein [Xenopus laevis]
Length = 342
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------------GIVEG-KKDDIAQFFDGLEIISNG 54
RYIEVFK EM+W L+H G+ G K++I QFF GL I+ NG
Sbjct: 4 RYIEVFKSNNTEMEWVLKHNSTDDVETDSDGTVRLRGLPFGCSKEEIVQFFSGLRIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 64 ITLTVD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 104
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ DIA FF L I I + D GR TGEA V+F E A A+ K K + HRYI
Sbjct: 223 SESDIANFFSPLTPIRVHIDVGAD---GRATGEADVEFATHEDAVAAMSKDKNNMQHRYI 279
>gi|321466664|gb|EFX77658.1| hypothetical protein DAPPUDRAFT_198258 [Daphnia pulex]
Length = 397
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 21/105 (20%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEG--------------------KKDDIAQFFDGLEII 51
RYIEVF+ +R EM+W ++ +G K++IAQFF GLEI+
Sbjct: 77 RYIEVFRSKRSEMEWMVKRSGPPNAAAPSSDDDCFVRLRGLPFGCSKEEIAQFFTGLEIV 136
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D ++GR TGEAY+QF AE AL+KHKE+IGHRYI
Sbjct: 137 PNGITLPTD-YSGRSTGEAYIQFATSALAERALEKHKEKIGHRYI 180
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQF 74
F VR + + W + DDI +FF+ I+ + GI + GRPTGE Y++
Sbjct: 7 FVVRLRGLPWAV--------TDDDILKFFEDSNIVGGAAGIHMTYTR-EGRPTGEGYLEL 57
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E E AL KH E +G RYI
Sbjct: 58 SSEEDVERALTKHNEHLGPRYI 79
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+DDIA+FF L ++ I + GR +GEA V+F E A A+ + K + HRY
Sbjct: 318 ASEDDIAEFFHPLHPVAIHIGYEQ----GRASGEADVEFATHEDAVRAMSRDKCNMQHRY 373
Query: 96 I 96
I
Sbjct: 374 I 374
>gi|242007190|ref|XP_002424425.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
gi|212507825|gb|EEB11687.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
Length = 412
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEIISNG 54
RY+EVFK +R EMDW ++ +G + +G K++IAQFF GLEI+ NG
Sbjct: 79 RYMEVFKSKRSEMDWVIKRSGSNLETALDDGCVRLRGLPFGCSKEEIAQFFTGLEIVPNG 138
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D GR TGEAYVQF +K+ AE AL KHKE+I HRYI
Sbjct: 139 ITLPMDS-RGRSTGEAYVQFKNKDIAEKALLKHKEKIAHRYI 179
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K D+A FF + +S + L ED +GRP+GEA V+F + A LA+ K+K + HRYI
Sbjct: 315 KQDVADFFRPVIPLSIDL-LTED--DGRPSGEADVEFRTHDDAVLAMSKNKNHMQHRYI 370
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++I +FF+ ++ + G+ ++ GRP+GEAYV+ + E AL+K ++ +G RY+
Sbjct: 23 EEILKFFNNCKVKNGKEGVHIIMTR-EGRPSGEAYVEMETDQDIEEALKKDRDYMGTRYM 81
>gi|351714741|gb|EHB17660.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 396
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------------GIVEG-KKDDIAQFFDGLEIISNG 54
RYIEVFK + EMDW L+H+ G+ G K +I QFF GLEI+ NG
Sbjct: 80 RYIEVFKSHKTEMDWVLKHSSPNSTDTANDSFVRLWGLSFGCTKGEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TG+A++QF +E AE AL+KHKE+IGHRYI
Sbjct: 140 ITLPVDP-EGKFTGKAFLQFASQELAEKALRKHKEKIGHRYI 180
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ +E + AL+K +E +GHRYI F H+ + ++H +P
Sbjct: 50 GRQSGEAFVELESEEDVKTALKKDRESMGHRYIEVFKSHKTEMDWVLKHSSP 101
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER--IGHRY 95
++DI FF L + I + NGR TGEA V+F E A A+ K K+R I HRY
Sbjct: 301 ENDIYNFFSPLNAVRVHIEIRP---NGRVTGEADVEFATNEEAMAAMSKDKDRTNIQHRY 357
Query: 96 I 96
I
Sbjct: 358 I 358
>gi|395521348|ref|XP_003764780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 304
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEII 51
++ RY+EVF+ EMDW L+ T G V + K+DI QFF GLEI+
Sbjct: 77 MAHRYVEVFRSNAVEMDWTLKRTAPNSPDPAGDGYVRLRGLPFNCNKEDIVQFFSGLEIM 136
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGI L D F GR +GEA+VQF +E AE AL+KHKER+GHRYI
Sbjct: 137 PNGIMLQVD-FRGRNSGEAFVQFASQEIAEKALKKHKERMGHRYI 180
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQF 74
F V+ + + W + D+ FF G I NG+ + + GRP+GEA+V+
Sbjct: 10 FVVKVRGLPWSCSAS--------DVQHFFSGCRI-RNGVAGIHFIYTREGRPSGEAFVEL 60
Query: 75 VDKETAELALQKHKERIGHRYI 96
+E ELAL+KH+E + HRY+
Sbjct: 61 ESEEEVELALKKHRETMAHRYV 82
>gi|47222987|emb|CAF99143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 63/101 (62%), Gaps = 18/101 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW ++HTG + G K++I QFF GLEI+ NG
Sbjct: 76 RYVEVFKSNNVEMDWVMKHTGPNCPGTAGDGLIRLRGLPFGCSKEEIVQFFSGLEIVPNG 135
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
ITL D GR TGEA+VQF ++ AE AL+KHKERIGHR+
Sbjct: 136 ITLPVD-IQGRSTGEAFVQFASQDIAEKALKKHKERIGHRW 175
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
D++ +FF G +I++NG + GRP+GEA+V+ ++ ++A++K +E +GHRY+
Sbjct: 20 DEVQRFFSGCKILNNGSGIHFTYTREGRPSGEAFVEMETEDDLKVAVKKDRETMGHRYVE 79
Query: 97 FFTGHR----YTVQHRAPRC 112
F + + ++H P C
Sbjct: 80 VFKSNNVEMDWVMKHTGPNC 99
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 282 DIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 335
>gi|334313810|ref|XP_001369254.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Monodelphis domestica]
Length = 377
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEG---------------KKDDIAQFFDGLEIISNGITL 57
YI FK EMDW ++H G + K++I QFF GLEI+ NGITL
Sbjct: 20 YILTFKSNGFEMDWVMKHNGPNDAASDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITL 79
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 80 TMD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 117
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 239 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 294
>gi|395737930|ref|XP_003777005.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pongo abelii]
Length = 596
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE-----------------GKKDDIAQFFDGLEIISNG 54
R++EVFK EMDW +HTG+ K++I FF GLEI+ NG
Sbjct: 67 RHVEVFKSNSVEMDWVSKHTGLNSPDTANDGFVWLRGLPFGCXKEEIVHFFSGLEIVPNG 126
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCET 114
ITL D F GR TGEA+V +E AE AL+KH+ERIGHRYI + V C+
Sbjct: 127 ITLXVD-FQGRSTGEAFVPLASQEIAETALKKHRERIGHRYIEIXNSQAEVHTYCDPCQK 185
Query: 115 SIPV 118
+ V
Sbjct: 186 LMAV 189
>gi|126328002|ref|XP_001371131.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 466
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 64/102 (62%), Gaps = 18/102 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EVF+ EMDW L+HT G V + K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFRSSNIEMDWVLKHTAPNSLDTASDGFVRLRGLPFRCNKEEIVQFFSGLEIMPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL D F GR +GEA+VQF +E AE AL+K+KE IGHRYI
Sbjct: 141 ITLPVD-FQGRNSGEAFVQFASQEIAEKALKKNKETIGHRYI 181
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYV 72
E F V+ + + W + DI QFF +I++ GI V G+ +GEA+V
Sbjct: 9 EGFVVKVRGLPWSCSAS--------DIQQFFSECKILNEEAGIHFVYTR-EGKLSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ LAL+K +E +GHRY+
Sbjct: 60 ELKSEDEITLALKKDRETMGHRYV 83
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L+ + I + D GR TGEA V+F E A A+ K K + HRYI
Sbjct: 295 ENDICDFFSPLKPVGAYIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYI 350
>gi|431904171|gb|ELK09593.1| Heterogeneous nuclear ribonucleoprotein H3 [Pteropus alecto]
Length = 405
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 15/96 (15%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVED 60
+ FK EMDW ++H G + K++I QFF GLEI+ NGITL D
Sbjct: 51 DAFKSNGIEMDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD 110
Query: 61 PFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 111 -YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 145
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 267 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 322
>gi|348575706|ref|XP_003473629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Cavia
porcellus]
Length = 372
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 57/95 (60%), Gaps = 15/95 (15%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDP 61
FK EMDW ++H G + K++I QFF GLEI+ NGITL D
Sbjct: 19 AFKSNGIEMDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD- 77
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 78 YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 112
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 234 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 289
>gi|390475715|ref|XP_003735008.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Callithrix jacchus]
Length = 421
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 64/107 (59%), Gaps = 18/107 (16%)
Query: 7 GEVSDRYIEV---FKVRRQEMDWKLQHTGIVEGK--------------KDDIAQFFDGLE 49
G + D+ EV FK EMDW ++H G + + K++I QFF GLE
Sbjct: 71 GFLEDQVSEVKGAFKSNGIEMDWVMKHNGPNDARDGTVRLRGLPFGCSKEEIVQFFQGLE 130
Query: 50 IISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I+ NGITL+ D + GR TGEA+VQF KE E AL KHKERIGHRYI
Sbjct: 131 IVPNGITLMMD-YQGRSTGEAFVQFASKEITENALGKHKERIGHRYI 176
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + H+YI
Sbjct: 283 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHQYI 338
>gi|351695486|gb|EHA98404.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 348
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 23/133 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RY+EVF+ E D L+H+G K++I QFF GLEI+ NG
Sbjct: 13 RYLEVFESHGTETDRVLKHSGPDSADSAKGGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 72
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCET 114
ITL DP G+ TGEA+VQF +E AE AL+KHKERIGHRYI + + R +
Sbjct: 73 ITLPVDP-EGKITGEAFVQFASQELAEKALRKHKERIGHRYI----EVFKSSQQEVRSYS 127
Query: 115 SIPVS-SSTHKPG 126
+P+ S +PG
Sbjct: 128 DLPLKFMSMQRPG 140
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER--IGHRY 95
++DI FF L + +E NGR TGEA V+F E A A+ K K+R I HRY
Sbjct: 233 ENDIYNFFSPLNAVR---VHIEIRPNGRVTGEADVEFATNEEAMAAMSKDKDRTNIQHRY 289
Query: 96 I 96
I
Sbjct: 290 I 290
>gi|343961567|dbj|BAK62373.1| heterogeneous nuclear ribonucleoprotein H [Pan troglodytes]
Length = 357
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 21/123 (17%)
Query: 24 MDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNGITLVEDPFNGRP 66
MDW L+HTG + G K++I QFF GLEI+ NGITL D F GR
Sbjct: 1 MDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVD-FQGRS 59
Query: 67 TGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPRCETSIPVSSSTH 123
TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR ++
Sbjct: 60 TGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYD 119
Query: 124 KPG 126
+PG
Sbjct: 120 RPG 122
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 210 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 265
>gi|355761375|gb|EHH61795.1| hypothetical protein EGM_19914 [Macaca fascicularis]
Length = 357
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 21/123 (17%)
Query: 24 MDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNGITLVEDPFNGRP 66
MDW L+HTG + G K++I QFF GLEI+ NGITL D F GR
Sbjct: 1 MDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVD-FQGRS 59
Query: 67 TGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPRCETSIPVSSSTH 123
TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ + PR ++
Sbjct: 60 TGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYD 119
Query: 124 KPG 126
+PG
Sbjct: 120 RPG 122
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 210 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 265
>gi|395754533|ref|XP_003779794.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Pongo abelii]
Length = 440
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGI-------------VEGKKDDIAQFFDGLEIISNGI 55
+ RY+ VFK EMD L+H+G E K++I QFF LEI+ NGI
Sbjct: 77 IGHRYVSVFKSNNVEMDGVLKHSGPDSSVMANDGFVLPFECSKEEIVQFFSWLEIVPNGI 136
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPRCET 114
TL+ D F GR TGEA+VQ+ +E AE L+KHKERI H YI F R V+ T
Sbjct: 137 TLMVD-FQGRSTGEAFVQYASQEIAENVLEKHKERIRHMYIKIFKSSRAEVRTXKKLMAT 195
Query: 115 SIP 117
P
Sbjct: 196 QQP 198
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF + S + +V P +GR TGEA V+FV E A A+ K K HRY+
Sbjct: 293 ENDIYNFFXTAQ--SWRVHIVIGP-DGRVTGEANVEFVTXEDAVAAMSKDKANTHHRYV 348
>gi|344240722|gb|EGV96825.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 241
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 18/99 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R +MDW L+H+G K++I QFF GLEI+ NG
Sbjct: 82 RYIEVFKSHRTKMDWVLKHSGSNRANSANDGFVRLPGLPFGCTKEEIVQFFSGLEIVPNG 141
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
ITL DP G+ TGEA++Q +E AE AL KHKERIG
Sbjct: 142 ITLPVDP-EGKITGEAFIQIASQELAEKALGKHKERIGQ 179
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 33 IVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKER 90
+ G +D+ F I +G++ V + GR +GEA+V+ + +LAL+K K+R
Sbjct: 18 LWSGSIEDVQNFLSNC-TIHDGVSGVHFIYTSEGRQSGEAFVELQSENDVKLALKKKKDR 76
Query: 91 --IGHRYI-FFTGHR 102
+GHRYI F HR
Sbjct: 77 ESMGHRYIEVFKSHR 91
>gi|291389582|ref|XP_002711385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Oryctolagus
cuniculus]
Length = 415
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 18/101 (17%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNGI 55
YI+VFK R E+DW L+H+G K++I QFF GLEI+ NGI
Sbjct: 82 YIKVFKSHRTELDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGI 141
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL D + + TGEA+VQF +E AE AL KHKERIGHR I
Sbjct: 142 TLPVDSED-KITGEAFVQFASQEVAEKALGKHKERIGHRSI 181
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E GH YI F HR + ++H P
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESTGHPYIKVFKSHRTELDWVLKHSGP 102
>gi|395521342|ref|XP_003764777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 465
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEII 51
++ RY+EVF+ EMDW L+ T G V + K+DI +FF GLEI+
Sbjct: 77 MAHRYVEVFRSNGVEMDWTLKRTAPSSPDPAGDGYVRLRGLPFNCNKEDIVEFFSGLEIM 136
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGI L D F G+ +GEA+VQF +E AE AL+KHKE++GHRYI
Sbjct: 137 PNGIMLQVD-FRGKNSGEAFVQFASQEIAEKALKKHKEKMGHRYI 180
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF G I NG+ + + GRP+GEA+V+ +E ELAL+KHKE + HRY+
Sbjct: 25 DVQNFFSGCRI-RNGVAGIHFMYTREGRPSGEAFVELESEEEIELALKKHKETMAHRYV 82
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ + DI FF L+ + I + D GR TGEA V+F E A A+ K K + HR
Sbjct: 292 KATEKDIYDFFSPLKPVGAYIEVGAD---GRVTGEADVEFATHEDAVAAMSKDKANMQHR 348
Query: 95 YI 96
YI
Sbjct: 349 YI 350
>gi|148700120|gb|EDL32067.1| mCG11326, isoform CRA_d [Mus musculus]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
>gi|149043915|gb|EDL97366.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
>gi|119637823|ref|NP_001073293.1| heterogeneous nuclear ribonucleoprotein H3 [Mus musculus]
gi|157818423|ref|NP_001102002.1| heterogeneous nuclear ribonucleoprotein H3 [Rattus norvegicus]
gi|148700117|gb|EDL32064.1| mCG11326, isoform CRA_a [Mus musculus]
gi|149043914|gb|EDL97365.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_c [Rattus norvegicus]
gi|182887935|gb|AAI60206.1| Heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|148700119|gb|EDL32066.1| mCG11326, isoform CRA_c [Mus musculus]
gi|149043913|gb|EDL97364.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 314
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++DIA FF L I I + D GR TGEA V+FV E A A+ K K +
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNM 258
>gi|301755896|ref|XP_002913784.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Ailuropoda melanoleuca]
gi|281346969|gb|EFB22553.1| hypothetical protein PANDA_001623 [Ailuropoda melanoleuca]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|330864791|ref|NP_001193508.1| heterogeneous nuclear ribonucleoprotein H3 [Bos taurus]
Length = 317
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ + K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSRDKNNMQHRYI 263
>gi|344275081|ref|XP_003409342.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 1 [Loxodonta africana]
Length = 350
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 209 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 264
>gi|14141157|ref|NP_036339.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Homo
sapiens]
gi|343780936|ref|NP_001230484.1| heterogeneous nuclear ribonucleoprotein H3 [Sus scrofa]
gi|388452508|ref|NP_001253678.1| heterogeneous nuclear ribonucleoprotein H3 [Macaca mulatta]
gi|73952781|ref|XP_536369.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Canis lupus familiaris]
gi|149689928|ref|XP_001503654.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Equus caballus]
gi|291404271|ref|XP_002718501.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 1 [Oryctolagus cuniculus]
gi|296220546|ref|XP_002756352.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Callithrix jacchus]
gi|332218213|ref|XP_003258253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Nomascus leucogenys]
gi|332834180|ref|XP_521495.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan troglodytes]
gi|397520483|ref|XP_003830346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan paniscus]
gi|402880658|ref|XP_003903915.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Papio anubis]
gi|403273867|ref|XP_003928719.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Saimiri boliviensis boliviensis]
gi|410975227|ref|XP_003994035.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Felis catus]
gi|410975229|ref|XP_003994036.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Felis catus]
gi|426364932|ref|XP_004049545.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Gorilla gorilla gorilla]
gi|23503095|sp|P31942.2|HNRH3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H3;
Short=hnRNP H3; AltName: Full=Heterogeneous nuclear
ribonucleoprotein 2H9; Short=hnRNP 2H9
gi|5542020|gb|AAD45179.1|L32610_1 ribonucleoprotein [Homo sapiens]
gi|7739436|gb|AAF68843.1| hnRNP 2H9 [Homo sapiens]
gi|119574665|gb|EAW54280.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|119574670|gb|EAW54285.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|351702487|gb|EHB05406.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus
glaber]
gi|355562560|gb|EHH19154.1| hypothetical protein EGK_19802 [Macaca mulatta]
gi|355782891|gb|EHH64812.1| hypothetical protein EGM_18125 [Macaca fascicularis]
gi|380784275|gb|AFE64013.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|380812322|gb|AFE78035.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|410221428|gb|JAA07933.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410221430|gb|JAA07934.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410258984|gb|JAA17458.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410258988|gb|JAA17460.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410302442|gb|JAA29821.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410302446|gb|JAA29823.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410342067|gb|JAA39980.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410342069|gb|JAA39981.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|432106705|gb|ELK32357.1| Heterogeneous nuclear ribonucleoprotein H3 [Myotis davidii]
gi|440895821|gb|ELR47915.1| Heterogeneous nuclear ribonucleoprotein H3 [Bos grunniens mutus]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|395820622|ref|XP_003783662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Otolemur garnettii]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|354477666|ref|XP_003501040.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 1 [Cricetulus griseus]
Length = 340
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|62898443|dbj|BAD97161.1| heterogeneous nuclear ribonucleoprotein H3 isoform a variant
[Homo sapiens]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|392355325|ref|XP_003752006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Rattus norvegicus]
gi|148700118|gb|EDL32065.1| mCG11326, isoform CRA_b [Mus musculus]
gi|149043912|gb|EDL97363.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 193 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 248
>gi|119574668|gb|EAW54283.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_d
[Homo sapiens]
Length = 149
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
>gi|14141159|ref|NP_067676.2| heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo
sapiens]
gi|291404273|ref|XP_002718502.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 2 [Oryctolagus cuniculus]
gi|296220548|ref|XP_002756353.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Callithrix jacchus]
gi|332218215|ref|XP_003258254.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Nomascus leucogenys]
gi|332834182|ref|XP_003312632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan troglodytes]
gi|338716820|ref|XP_003363523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Equus caballus]
gi|345798943|ref|XP_860394.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Canis lupus familiaris]
gi|397520485|ref|XP_003830347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan paniscus]
gi|402880660|ref|XP_003903916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Papio anubis]
gi|403273869|ref|XP_003928720.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Saimiri boliviensis boliviensis]
gi|410975231|ref|XP_003994037.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Felis catus]
gi|426364934|ref|XP_004049546.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Gorilla gorilla gorilla]
gi|7739443|gb|AAF68849.1|AF132361_1 hnRNP 2H9A [Homo sapiens]
gi|7739440|gb|AAF68847.1| hnRNP 2H9A [Homo sapiens]
gi|24981041|gb|AAH39824.1| Heterogeneous nuclear ribonucleoprotein H3 (2H9) [Homo sapiens]
gi|119574667|gb|EAW54282.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_c
[Homo sapiens]
gi|158256526|dbj|BAF84236.1| unnamed protein product [Homo sapiens]
gi|261861160|dbj|BAI47102.1| heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
gi|296472170|tpg|DAA14285.1| TPA: heterogeneous nuclear ribonucleoprotein H3 (2H9) [Bos
taurus]
gi|380812320|gb|AFE78034.1| heterogeneous nuclear ribonucleoprotein H3 isoform b [Macaca
mulatta]
gi|410221432|gb|JAA07935.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410258986|gb|JAA17459.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410302444|gb|JAA29822.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
gi|410342071|gb|JAA39982.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan
troglodytes]
Length = 331
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 193 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 248
>gi|395820624|ref|XP_003783663.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Otolemur garnettii]
Length = 331
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 193 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 248
>gi|354477668|ref|XP_003501041.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 2 [Cricetulus griseus]
gi|344247616|gb|EGW03720.1| Heterogeneous nuclear ribonucleoprotein H3 [Cricetulus griseus]
Length = 325
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 193 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 248
>gi|344275083|ref|XP_003409343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 2 [Loxodonta africana]
Length = 335
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 194 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 249
>gi|395741721|ref|XP_003780739.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H3 [Pongo abelii]
Length = 346
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASKEIAENALGKHKERIGHRYI 86
>gi|395501374|ref|XP_003755070.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3
[Sarcophilus harrisii]
Length = 342
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Query: 24 MDWKLQHTGIVEG---------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPTG 68
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TG
Sbjct: 1 MDWVMKHNGPNDAASDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMD-YQGRSTG 59
Query: 69 EAYVQFVDKETAELALQKHKERIGHRYI 96
EA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 EAFVQFASKEIAENALGKHKERIGHRYI 87
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 209 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDALAAMSKDKNNMQHRYI 264
>gi|156375031|ref|XP_001629886.1| predicted protein [Nematostella vectensis]
gi|156216896|gb|EDO37823.1| predicted protein [Nematostella vectensis]
Length = 354
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK----------------KDDIAQFFDGLEIISNGI 55
RYIEVF+ + +EM+W ++ G + K++IAQFF GLEI+ NGI
Sbjct: 76 RYIEVFRSKAEEMEWVIKRMGPPSDRDQEAVVKLRGLPYGCSKEEIAQFFTGLEIVPNGI 135
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
T+ D G+ TGE +V+F E A A+QKHKE+IGHRYI
Sbjct: 136 TITLDE-EGKTTGEGFVEFASPEIAGQAMQKHKEKIGHRYI 175
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 39 DDIAQFFDGLEII---SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+DI FF I+ NG+ +GRP+GE +VQFV ++ E AL+ + E +G RY
Sbjct: 19 EDIQNFFKDCNIVGGPQNGVHFTFG-IDGRPSGECFVQFVSEKDVEKALEMNNEHMGKRY 77
Query: 96 I 96
I
Sbjct: 78 I 78
>gi|149602744|ref|XP_001512376.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 2 [Ornithorhynchus anatinus]
Length = 332
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Query: 24 MDWKLQHTGIVEG---------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPTG 68
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TG
Sbjct: 1 MDWVMKHNGPNDTASDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMD-YQGRSTG 59
Query: 69 EAYVQFVDKETAELALQKHKERIGHRYI 96
EA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 EAFVQFASKEIAENALGKHKERIGHRYI 87
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 194 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 249
>gi|159163318|pdb|1WG5|A Chain A, Solution Structure Of The First Rrm Domain In
Heterogeneous Nuclear Ribonucleoprotein H
Length = 104
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
K++I QFF GLEI+ NG+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 29 KEEIVQFFSGLEIVPNGMTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIE 87
Query: 97 FFTGHRYTVQHRAP 110
F R V+ P
Sbjct: 88 IFKSSRAEVRTSGP 101
>gi|390361167|ref|XP_003729861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 455
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 9 VSDRYIEVFKVRRQEMDWKL-QHTGIVEG--------------KKDDIAQFFDGLEIISN 53
+ RYIE+FK +R EM+W +++G +G K++IA+FF GL I +N
Sbjct: 75 LQKRYIELFKSKRSEMEWVTNRNSGGADGGEGLVKLRGLPFSCSKEEIAEFFSGLTIQAN 134
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GITL D +GR TGEA+V F KE AE AL+KHK +GHRYI
Sbjct: 135 GITLPSDN-DGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYI 176
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF G SN +V NG+ G A V F + A+ A++K K IG RYI
Sbjct: 340 DIKEFFHGSATPSN---VVIHDINGKRNGFAAVDFRTHDEAKAAMKKDKNNIGSRYI 393
>gi|390361165|ref|XP_793087.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 9 VSDRYIEVFKVRRQEMDWKL-QHTGIVEG--------------KKDDIAQFFDGLEIISN 53
+ RYIE+FK +R EM+W +++G +G K++IA+FF GL I +N
Sbjct: 75 LQKRYIELFKSKRSEMEWVTNRNSGGADGGEGLVKLRGLPFSCSKEEIAEFFSGLTIQAN 134
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GITL D +GR TGEA+V F KE AE AL+KHK +GHRYI
Sbjct: 135 GITLPSDN-DGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYI 176
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF G SN +V NG+ G A V F + A+ A++K K IG RYI
Sbjct: 340 DIKEFFHGSATPSN---VVIHDINGKRNGFAAVDFRTHDEAKAAMKKDKNNIGSRYI 393
>gi|45709575|gb|AAH67720.1| Zgc:85960 protein [Danio rerio]
Length = 302
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 24 MDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
MDW +++ + + FF GLEI+ NGITL D F GR TGEA+VQF ++ AE A
Sbjct: 1 MDWSDCAAFLLDVARKRLCSFFSGLEIVPNGITLPVD-FQGRSTGEAFVQFASQDIAEKA 59
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ--HRAPRCETSIPVSSSTHKPGRHHTLDGPNGGG 138
L+KHKERIGHRYI F R V+ + PR + +PG + D P+GGG
Sbjct: 60 LKKHKERIGHRYIEIFKSSRAEVRTHYEPPRKGMGM------QRPGPY---DRPSGGG 108
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 164 DIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 217
>gi|196010820|ref|XP_002115274.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
gi|190582045|gb|EDV22119.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
Length = 339
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 19/129 (14%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK----------------KDDIAQFFDGLEIISNGI 55
RY+EVFK +R EMD+ ++ T G+ K++IAQFF G EII NGI
Sbjct: 77 RYVEVFKSKRSEMDYVVKRTKQRSGRDSENVVRLRGLPYECSKEEIAQFFTGYEIIPNGI 136
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQH-RAPRCE 113
T D +GR TGEAYV+F + + +E AL K KE IGHRYI F + + + AP+
Sbjct: 137 TFGVDR-DGRSTGEAYVEFANTDVSERALSKDKETIGHRYIEIFRAKKSDIHNMSAPKIR 195
Query: 114 TSIPVSSST 122
I ++S+
Sbjct: 196 PLIGSAASS 204
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++I FFD + + + I + G+ TGEA V+F + E A A+ K + RI HRYI
Sbjct: 272 ENEIVDFFDQIPLQNIHIEYGD---GGKATGEAVVEFYNYEDALEAMNKDRRRIKHRYI 327
>gi|426255652|ref|XP_004021462.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Ovis aries]
Length = 346
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF E AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASMEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
>gi|327277958|ref|XP_003223730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 1 [Anolis carolinensis]
Length = 341
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Query: 24 MDWKLQHTGIVEGKKD---------------DIAQFFDGLEIISNGITLVEDPFNGRPTG 68
MDW +H G + D +I QFF GLEI+ NGITL D + GR TG
Sbjct: 1 MDWAGKHNGPNDSSSDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRSTG 59
Query: 69 EAYVQFVDKETAELALQKHKERIGHRYI 96
EA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 EAFVQFASKEIAEKALGKHKERIGHRYI 87
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 209 ENDIANFFSPLTPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 264
>gi|426255654|ref|XP_004021463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Ovis aries]
Length = 331
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF GLEI+ NGITL D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+VQF E AE AL KHKERIGHRYI
Sbjct: 60 AFVQFASMEIAENALGKHKERIGHRYI 86
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 193 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 248
>gi|326923399|ref|XP_003207924.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Meleagris gallopavo]
Length = 323
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 24 MDWKLQHTGIVEG----------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
MDW +H G + K++I QFF GLEI+ NGITL D + GR T
Sbjct: 1 MDWSGKHNGPTDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRST 59
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 GEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 192 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 247
>gi|327277960|ref|XP_003223731.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
isoform 2 [Anolis carolinensis]
Length = 326
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Query: 24 MDWKLQHTGIVEGKKD---------------DIAQFFDGLEIISNGITLVEDPFNGRPTG 68
MDW +H G + D +I QFF GLEI+ NGITL D + GR TG
Sbjct: 1 MDWAGKHNGPNDSSSDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRSTG 59
Query: 69 EAYVQFVDKETAELALQKHKERIGHRYI 96
EA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 EAFVQFASKEIAEKALGKHKERIGHRYI 87
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 194 ENDIANFFSPLTPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 249
>gi|198417021|ref|XP_002122500.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H2
(hnRNP H2) (Heterogeneous nuclear ribonucleoprotein H)
(hnRNP H) (FTP-3) [Ciona intestinalis]
Length = 420
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 19/106 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKL-----------QHTGIV-------EGKKDDIAQFFDGLEI 50
+ RYIEVF+ +EM++ L Q V + K+++AQFF GLEI
Sbjct: 72 IGKRYIEVFESSVKEMEYVLGLSEEEIGSSAQADVFVRLRGLPFQCSKEEVAQFFSGLEI 131
Query: 51 ISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ NGITL D NGR TGEAYV+F E+AE AL KHKE+IGHRYI
Sbjct: 132 VPNGITLPLDD-NGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYI 176
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F VR + + +K Q + D+ FF L + I +D GR TGE V F
Sbjct: 317 FVVRMRGLPFKCQ--------EQDVFNFFSPLVPVRVNIEYSDD---GRVTGEGTVFFAS 365
Query: 77 KETAELALQKHKERIGHRYI 96
+ A+ A+QK+KE I HRYI
Sbjct: 366 YQDAQAAMQKNKECIQHRYI 385
>gi|60302824|ref|NP_001012610.1| heterogeneous nuclear ribonucleoprotein H3 [Gallus gallus]
gi|60099043|emb|CAH65352.1| hypothetical protein RCJMB04_21b18 [Gallus gallus]
Length = 342
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 24 MDWKLQHTGIVEG----------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
MDW +H G + K++I QFF GLEI+ NGITL D + GR T
Sbjct: 1 MDWTGKHNGPTDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRST 59
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 GEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 211 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 266
>gi|402910822|ref|XP_003918047.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Papio
anubis]
Length = 386
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
K++I QFF GLEI+ NG+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 78 KEEIVQFFSGLEIVPNGMTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIE 136
Query: 97 FFTGHRYTVQ--HRAPRCETSIPVSSSTHKPG 126
F R V+ + PR ++ +PG
Sbjct: 137 IFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPG 168
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 256 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 311
>gi|224052106|ref|XP_002190890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Taeniopygia guttata]
Length = 342
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 24 MDWKLQHTGIVEG----------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
MDW +H G + K++I QFF GLEI+ NGITL D + GR T
Sbjct: 1 MDWSGKHNGPNDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRST 59
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 GEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 211 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 266
>gi|224052108|ref|XP_002190951.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Taeniopygia guttata]
Length = 327
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 24 MDWKLQHTGIVEG----------------KKDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
MDW +H G + K++I QFF GLEI+ NGITL D + GR T
Sbjct: 1 MDWSGKHNGPNDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRST 59
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 GEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 196 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 251
>gi|449269002|gb|EMC79814.1| Heterogeneous nuclear ribonucleoprotein H3 [Columba livia]
Length = 343
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 55/89 (61%), Gaps = 17/89 (19%)
Query: 24 MDWKLQHTG---------IVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
MDW +H G +V + K++I QFF GLEI+ NGITL D + GR T
Sbjct: 1 MDWTGKHNGPNDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLD-YQGRST 59
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 GEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 212 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 267
>gi|390361159|ref|XP_798587.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 3
[Strongylocentrotus purpuratus]
Length = 500
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDW---------KLQHTGIV-------EGKKDDIAQFFDGLEIISNGI 55
RYIEVF+ + EM+W K ++ G V + + DDI FF +I +GI
Sbjct: 76 RYIEVFRSKNSEMEWVTSRGGDKAKEENDGCVRLRGLPFDCRTDDINDFFKEYQIAEDGI 135
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL D ++GR TGEAYVQFV K+ AE AL KHK +GHRYI
Sbjct: 136 TLPTD-YDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYI 175
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI QFF N +V NGR TGEA F E A+ A+ KHK +G RYI
Sbjct: 328 EEDIHQFFGQTASPCN---VVIQKVNGRSTGEADADFQTVEAAQAAMTKHKSEMGPRYI 383
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDG--LEIISNGITLVEDPFNGRPTGEAYVQF 74
F VR + + W +DI FF +E ++G+ V P GRP+GE +V F
Sbjct: 6 FIVRARGLPWS--------ATAEDIVTFFSESVIEGGADGVKFVHLP-GGRPSGECFVVF 56
Query: 75 VDKETAELALQKHKERIGHRYI 96
+ L+K+ IGHRYI
Sbjct: 57 ESHDDVLKGLKKNNNHIGHRYI 78
>gi|390361163|ref|XP_003729860.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 521
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDW---------KLQHTGIV-------EGKKDDIAQFFDGLEIISNGI 55
RYIEVF+ + EM+W K ++ G V + + DDI FF +I +GI
Sbjct: 76 RYIEVFRSKNSEMEWVTSRGGDKAKEENDGCVRLRGLPFDCRTDDINDFFKEYQIAEDGI 135
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL D ++GR TGEAYVQFV K+ AE AL KHK +GHRYI
Sbjct: 136 TLPTD-YDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYI 175
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI QFF N +V NGR TGEA F E A+ A+ KHK +G RYI
Sbjct: 343 EEDIHQFFGQTASPCN---VVIQKVNGRSTGEADADFQTVEAAQAAMTKHKSEMGPRYI 398
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDG--LEIISNGITLVEDPFNGRPTGEAYVQF 74
F VR + + W +DI FF +E ++G+ V P GRP+GE +V F
Sbjct: 6 FIVRARGLPWS--------ATAEDIVTFFSESVIEGGADGVKFVHLP-GGRPSGECFVVF 56
Query: 75 VDKETAELALQKHKERIGHRYI 96
+ L+K+ IGHRYI
Sbjct: 57 ESHDDVLKGLKKNNNHIGHRYI 78
>gi|390361161|ref|XP_003729859.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 515
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDW---------KLQHTGIV-------EGKKDDIAQFFDGLEIISNGI 55
RYIEVF+ + EM+W K ++ G V + + DDI FF +I +GI
Sbjct: 76 RYIEVFRSKNSEMEWVTSRGGDKAKEENDGCVRLRGLPFDCRTDDINDFFKEYQIAEDGI 135
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
TL D ++GR TGEAYVQFV K+ AE AL KHK +GHRYI
Sbjct: 136 TLPTD-YDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYI 175
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI QFF N +V NGR TGEA F E A+ A+ KHK +G RYI
Sbjct: 343 EEDIHQFFGQTASPCN---VVIQKVNGRSTGEADADFQTVEAAQAAMTKHKSEMGPRYI 398
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDG--LEIISNGITLVEDPFNGRPTGEAYVQF 74
F VR + + W +DI FF +E ++G+ V P GRP+GE +V F
Sbjct: 6 FIVRARGLPWS--------ATAEDIVTFFSESVIEGGADGVKFVHLP-GGRPSGECFVVF 56
Query: 75 VDKETAELALQKHKERIGHRYI 96
+ L+K+ IGHRYI
Sbjct: 57 ESHDDVLKGLKKNNNHIGHRYI 78
>gi|157883792|pdb|2HGM|A Chain A, Nmr Structure Of The Second Qrrm Domain Of Human Hnrnp F
gi|297787487|pdb|2KG0|A Chain A, Structure Of The Second Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 126
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K++I QFF GLEI+ NGITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 56 KEEIVQFFSGLEIVPNGITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 113
>gi|335310367|ref|XP_003361999.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Sus
scrofa]
Length = 444
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 26/135 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
+ A+VQF +E AE AL+KHKERIGHRYI F R V+ + PR
Sbjct: 141 MXXXXX------XXXAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPR 194
Query: 112 CETSIPVSSSTHKPG 126
++ +PG
Sbjct: 195 KLMAMQRPGPYDRPG 209
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ +LAL+K +E +GHRY+
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 297 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 352
>gi|351700500|gb|EHB03419.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus
glaber]
Length = 260
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 24 MDWKLQHTGIVEGK--------------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
MDW ++H G + K++I QFF LEI+ NGIT+ D + GR TGE
Sbjct: 1 MDWVMKHNGPNDASDGTVRLLGLPFGCSKEEIVQFFQWLEIMPNGITMTMD-YQGRSTGE 59
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
+VQF KE AE AL KHKERIGHRYI
Sbjct: 60 TFVQFASKEIAENALGKHKERIGHRYI 86
>gi|432960846|ref|XP_004086494.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 370
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 12 RYIEVFKVRRQEMDWKLQHT-------GIV-------EGKKDDIAQFFDGLEIISNGITL 57
RY+EV +V + + LQH G+V +DDI FF GL+++ NGIT+
Sbjct: 142 RYVEVSEVTNSDAETILQHVAPPAAEDGVVMLRGLPFSCTQDDILLFFSGLDVVENGITM 201
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIP 117
V D GR +GEA+VQF +E A ALQKH+E +GHRY+ R + + +S+P
Sbjct: 202 VTD-GRGRNSGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTWKRRSSLP 260
Query: 118 VSSSTHKPGR 127
S++ GR
Sbjct: 261 PQSASPPAGR 270
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
EVF V+ + + W ++ FF I G+ L D GRP+G A++
Sbjct: 70 EVFIVQVRGLPWSC--------TVHELLHFFSDCRIRDGERGVHLTLDRL-GRPSGRAFI 120
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E AL+KH++ +G RY+
Sbjct: 121 EMEHEEDVSKALEKHRQYLGPRYV 144
>gi|74202595|dbj|BAE24862.1| unnamed protein product [Mus musculus]
Length = 171
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 18/92 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
+TL D F GR TGEA+VQF +E AE AL+K
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKK 171
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I NG + V + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 EEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>gi|357613158|gb|EHJ68351.1| putative Heterogeneous nuclear ribonucleoprotein H [Danaus
plexippus]
Length = 343
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 25/112 (22%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHT-----------------GIVEGK-------KDDIAQF 44
+ RYIEVF RQ+M+W L GIV+ + K++I QF
Sbjct: 76 IGRRYIEVFSTDRQDMEWALNAMRQSENGFDVIPNVSDDFGIVKLRGLPFGCSKEEIIQF 135
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
F+GL ++ +G+ L+ D GR +GEA+V FVDK++A AL + E+IGHRYI
Sbjct: 136 FNGLSVVQDGVHLLSD-HTGRASGEAFVYFVDKQSARDALDRDMEKIGHRYI 186
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 39 DDIAQFFDGLEIISN--GITLVE-DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+D+ F G+ +I++ G+ L E P GRP+GE +V+ ++ AL+K KE IG RY
Sbjct: 23 EDVLTFLSGVNVINDKEGVHLTEVRP--GRPSGECFVEVQSQDDVTHALKKDKENIGRRY 80
Query: 96 I 96
I
Sbjct: 81 I 81
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF + ++ I +GRP+GEA V+F E A A+++ K + HRYI
Sbjct: 271 DIAYFFKPIRPLNINIHYDN---SGRPSGEADVEFECHEDAMRAMRRDKNNMEHRYI 324
>gi|449685013|ref|XP_002164898.2| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Hydra
magnipapillata]
Length = 365
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 14/98 (14%)
Query: 12 RYIEVFKVRRQEMDWKLQHT------GIV-------EGKKDDIAQFFDGLEIISNGITLV 58
RYIEV + ++ EM+W + IV + K DIA+FF GL+I GIT+
Sbjct: 4 RYIEVKEAKQSEMEWVVNRMDNSRSEAIVRLRGLPFDCTKHDIAEFFSGLDISPYGITIT 63
Query: 59 EDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ +GR +G+AYV+FV ++ AE AL KHKE+IGHRYI
Sbjct: 64 MNQ-DGRASGDAYVEFVTQQDAENALLKHKEKIGHRYI 100
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E DI FF L + + L+ +P NGRP GE V F AE A+ K K+ +GHR
Sbjct: 206 EASVSDIVTFFSPLNPVD--VRLMFEP-NGRPKGECDVDFATHSDAESAMLKDKQNMGHR 262
Query: 95 YI 96
YI
Sbjct: 263 YI 264
>gi|443701155|gb|ELT99751.1| hypothetical protein CAPTEDRAFT_226859 [Capitella teleta]
Length = 390
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K+++A FF GLEI+ NGITL++D GR TG+A+VQF ++ AE A QKHKE+IGHRYI
Sbjct: 138 KEEVAHFFSGLEIVPNGITLMQDG-QGRSTGDAFVQFASQDIAERAQQKHKEKIGHRYI 195
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPF--NGRPTGEAYV 72
E F VR + + W H D++A F + I G + + + +GRP+GEAY+
Sbjct: 14 EGFIVRIRGLPWSASH--------DEVANFLEADVNIMGGRSGIHLTYTKDGRPSGEAYI 65
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E AL+K K +G RYI
Sbjct: 66 ELASEEDVAKALEKDKHHMGRRYI 89
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ +DDI +FF L ++ I + D G+ +G+A V F + A A+ + +E + HR
Sbjct: 280 QAAEDDIVEFFKPLAPVNIAIHYMPD---GKASGQADVDFATHQEASEAMSRDRESMEHR 336
Query: 95 YI 96
YI
Sbjct: 337 YI 338
>gi|417409638|gb|JAA51317.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 315
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I + +GLEI+ NGITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 1 ICPWVEGLEIVPNGITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 55
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 177 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 232
>gi|417409472|gb|JAA51238.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 300
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I + +GLEI+ NGITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 1 ICPWVEGLEIVPNGITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 55
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 162 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 217
>gi|47218706|emb|CAG05678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 488
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 32/104 (30%)
Query: 24 MDWKLQHTGIVE-----------------GKKDDIAQFF--------------DGLEIIS 52
MDW L+ +G + K++I QFF +GL I+
Sbjct: 1 MDWVLKRSGPADYDSCSGCTLRLRGLPFGCSKEEIVQFFSVSIPTSVSMCAWVEGLRIVP 60
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 61 NGITLPVD-YQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYI 103
>gi|193636729|ref|XP_001950119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 440
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIV-----------------EGKKDDIAQFFDGLEII 51
+ +RYI+VF +R EM+W ++ TG + K++I +FF GLEI
Sbjct: 93 MGNRYIKVFPSKRSEMEWAIKITGSTLDNELYDNCVRIRGLPFDYTKNEIVEFFQGLEIT 152
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ IT+V + GR EA+VQFV++E E ALQKH E+I RYI
Sbjct: 153 PDDITIVINS-KGRRMKEAFVQFVNRENLEKALQKHMEKIRFRYI 196
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 39 DDIAQFFD--GLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHR 94
DDI +F + G + +G + V N G+P+ +AYV+ +E+ + AL+K +E +G+R
Sbjct: 37 DDIIKFLNTLGEAKVKDGASGVHFTMNRKGKPSSQAYVEMESEESLKAALKKDREYMGNR 96
Query: 95 YI 96
YI
Sbjct: 97 YI 98
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 34 VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
++ K+DIA+FF+ L+ ++ N +P GEA V+F + E A A+ K+K + H
Sbjct: 291 LKANKNDIAKFFEPLKPVNIHFIFNN---NNQPYGEANVEFGNIEDAVQAMSKNKTFMEH 347
Query: 94 RYI 96
RYI
Sbjct: 348 RYI 350
>gi|402589318|gb|EJW83250.1| hypothetical protein WUBG_05840 [Wuchereria bancrofti]
Length = 451
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 22/108 (20%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK-------------------DDIAQFFDGL 48
E+++RYIEVF V E+ W +H I +G + DD+ +FF GL
Sbjct: 28 EMNNRYIEVFNVTESEVVWMTRHNVIRKGDQETPYNFVVRLRGIPFSATNDDVKEFFSGL 87
Query: 49 EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
E+ +++ GRP+GEA+V+F K+ AE+AL++++ +G RY+
Sbjct: 88 EVAD---VVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYV 132
>gi|312081197|ref|XP_003142925.1| RNA binding protein [Loa loa]
gi|307761913|gb|EFO21147.1| RNA binding protein [Loa loa]
Length = 547
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 22/108 (20%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKD-------------------DIAQFFDGL 48
E+++RYIEVF V E+ W +H I +G +D D+ +FF GL
Sbjct: 123 EMNNRYIEVFNVTESEVVWMTRHNVIRKGDQDTPYNFVVRLRGIPFSATNDDVKEFFTGL 182
Query: 49 EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
E+ +++ GRP+GEA+V+F K+ AE+AL++++ +G RY+
Sbjct: 183 EVAD---VVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYV 227
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DD+ F +GLE+ S TL GR +GE YV+ VDK AE A + K+ + +RY
Sbjct: 72 AKEDDVRAFLEGLEVRSVTFTLTS---MGRASGECYVELVDKAAAEEAKRFDKQEMNNRY 128
Query: 96 I 96
I
Sbjct: 129 I 129
>gi|358341226|dbj|GAA32134.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 404
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL----QHT-----------GI-VEGKKDDIAQFFDGLEIISNGI 55
RYIEVF QEM+ + Q+T G+ + +K +I FF+GLEI NGI
Sbjct: 72 RYIEVFPSTEQEMNNAMGKHDQYTRDRKEYVVRLRGLPYDTEKKEIYAFFNGLEIAPNGI 131
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E A +KH E+IGHRYI
Sbjct: 132 GLLVDHM-GRCTGEAYVQFTSAEMLARAKEKHMEKIGHRYI 171
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-F 97
DDI +F L+ ++ I + +GRPTGEA V F + A+ A++K +E+IG RYI
Sbjct: 317 DDIDRFLAPLQPVNVRIRMNS---SGRPTGEAVVDFASHDEAKEAMKKDREKIGSRYIEL 373
Query: 98 FTGHRYTVQHRAPRCETSI 116
F T APR +S+
Sbjct: 374 FLAS--TPMGNAPRAVSSV 390
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 36 GKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
+ DDI FF ++I + GI + P NGR GEA+++ K+ E A H E +G
Sbjct: 13 ARADDIIDFFKDVKIKNGKRGIFFPQGP-NGRSNGEAFIELESKQEIEKATAHHNEHMGR 71
Query: 94 RYI 96
RYI
Sbjct: 72 RYI 74
>gi|348513989|ref|XP_003444523.1| PREDICTED: G-rich sequence factor 1-like [Oreochromis niloticus]
Length = 400
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHT-------GIV-------EGKKDDIAQFFDGLEIISNGITL 57
RY+EV++V + + L+ G+V +DDI FF GLEI NGIT+
Sbjct: 164 RYVEVYEVTNGDAEAILKKATQPLGADGVVLLRGLPFTCTEDDIVHFFSGLEITENGITM 223
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR +G AYVQF +E A+ ALQ+ +E IG+RYI
Sbjct: 224 VTDS-RGRKSGVAYVQFTSQEAADEALQRDREIIGNRYI 261
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
EV+ V+ + + W D+ QFF I GI L D GRP+G A++
Sbjct: 92 EVYIVQVKGLPWSC--------TTQDLLQFFSECRIRDGVKGIHLTLDRL-GRPSGRAFI 142
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E AL+KH++ +G RY+
Sbjct: 143 EMEHEEDVSKALEKHRQYLGPRYV 166
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ +DI +FF L + L+E +GRP+GEA V F A A+ K + IG R
Sbjct: 329 QASGEDIVKFFYPLAV---SKILIECGPDGRPSGEADVYFHCHRDAVAAMSKDRMNIGER 385
Query: 95 YI 96
YI
Sbjct: 386 YI 387
>gi|328717324|ref|XP_001952255.2| PREDICTED: hypothetical protein LOC100163028 [Acyrthosiphon pisum]
Length = 819
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 11 DRYIEVFKVRRQEMDWKLQHTGI---------VEG-----KKDDIAQFFDGLEIISNGIT 56
DRYI VF R EM+ ++ G + G KDDI +FF GLE+I NGIT
Sbjct: 634 DRYINVFPSNRSEMEQDIKENGSKLDSDNCVHIRGLPFDFTKDDIVEFFQGLEMIPNGIT 693
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ + GR A+VQFV++E E AL+KH ++I RYI
Sbjct: 694 -ISNSSAGRIG--AFVQFVNRENVEKALKKHMKKIRQRYI 730
>gi|427792669|gb|JAA61786.1| Putative splicing factor hnrnp-f, partial [Rhipicephalus
pulchellus]
Length = 302
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +GLEI+ NGITL D + GR TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 19 ILGLIEGLEIVPNGITLPTD-YQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 73
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF + I N + ED +GRP+GE V+F E A A+ K K + HRYI
Sbjct: 169 DIFEFFQPMNPI-NVHLIYED--SGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYI 222
>gi|226487870|emb|CAX75600.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 278
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL-----------QHTGIVEG-----KKDDIAQFFDGLEIISNGI 55
RYIEVF +E++ + +H + G +K +I FF+GLEI NGI
Sbjct: 73 RYIEVFDSCSEELNNAMGSRPFSSPNRREHVVRLRGLPYDTEKKEIYAFFNGLEIAPNGI 132
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E+ A +KH E+IGHRYI
Sbjct: 133 GLLVDHM-GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYI 172
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + P NGR GEA+++ K+ E A+ H E +G RYI
Sbjct: 17 DDIINFFKDCTIRGGKRGIYFPQGP-NGRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYI 75
>gi|256090135|ref|XP_002581069.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232933|emb|CCD80288.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 338
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL-----------QHTGIVEG-----KKDDIAQFFDGLEIISNGI 55
RYIEVF ++++ + +H + G +K +I FF+GLEI NGI
Sbjct: 73 RYIEVFDSCSEDLNNAMGCRPYHSSNRREHVVRLRGLPYDTEKKEIFAFFNGLEIAPNGI 132
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E+ A +KH E+IGHRYI
Sbjct: 133 GLLVDHM-GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYI 172
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + NGR GEA+++ K+ + A+ H + +G RYI
Sbjct: 17 DDIISFFHDCRIRGGKRGIYFPQGS-NGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYI 75
>gi|256090131|ref|XP_002581067.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 472
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL-----------QHTGIVEG-----KKDDIAQFFDGLEIISNGI 55
RYIEVF ++++ + +H + G +K +I FF+GLEI NGI
Sbjct: 73 RYIEVFDSCSEDLNNAMGCRPYHSSNRREHVVRLRGLPYDTEKKEIFAFFNGLEIAPNGI 132
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E+ A +KH E+IGHRYI
Sbjct: 133 GLLVDHM-GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYI 172
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
K+DI +F L+ ++ I + + N RPTGEA V F + A+ A++K +E+IG RYI
Sbjct: 310 KEDIDRFLSPLQPVN--IRMRFNAAN-RPTGEAIVDFASHDEAKEAMKKDREKIGPRYIE 366
Query: 97 FFTGHRYTVQHRAPRCETSIPVSSSTHKP 125
F + R S PVSS P
Sbjct: 367 LFLASTPKGISPSSRINNSAPVSSRRSPP 395
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + NGR GEA+++ K+ + A+ H + +G RYI
Sbjct: 17 DDIISFFHDCRIRGGKRGIYFPQGS-NGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYI 75
>gi|301632397|ref|XP_002945272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like,
partial [Xenopus (Silurana) tropicalis]
Length = 218
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 48 LEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L I+ NGITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 1 LRIVPNGITLTVD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 48
>gi|353232935|emb|CCD80290.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 497
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL-----------QHTGIVEG-----KKDDIAQFFDGLEIISNGI 55
RYIEVF ++++ + +H + G +K +I FF+GLEI NGI
Sbjct: 73 RYIEVFDSCSEDLNNAMGCRPYHSSNRREHVVRLRGLPYDTEKKEIFAFFNGLEIAPNGI 132
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E+ A +KH E+IGHRYI
Sbjct: 133 GLLVDHM-GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYI 172
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
K+DI +F L+ ++ I + + N RPTGEA V F + A+ A++K +E+IG RYI
Sbjct: 310 KEDIDRFLSPLQPVN--IRMRFNAAN-RPTGEAIVDFASHDEAKEAMKKDREKIGPRYIE 366
Query: 97 FFTGHRYTVQHRAPRCETSIPVSSSTHKP 125
F + R S PVSS P
Sbjct: 367 LFLASTPKGISPSSRINNSAPVSSRRSPP 395
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + NGR GEA+++ K+ + A+ H + +G RYI
Sbjct: 17 DDIISFFHDCRIRGGKRGIYFPQGS-NGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYI 75
>gi|256090133|ref|XP_002581068.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232934|emb|CCD80289.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 386
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKL-----------QHTGIVEG-----KKDDIAQFFDGLEIISNGI 55
RYIEVF ++++ + +H + G +K +I FF+GLEI NGI
Sbjct: 73 RYIEVFDSCSEDLNNAMGCRPYHSSNRREHVVRLRGLPYDTEKKEIFAFFNGLEIAPNGI 132
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR TGEAYVQF E+ A +KH E+IGHRYI
Sbjct: 133 GLLVDHM-GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYI 172
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K+DI +F L+ ++ I + + N RPTGEA V F + A+ A++K +E+IG RYI
Sbjct: 310 KEDIDRFLSPLQPVN--IRMRFNAAN-RPTGEAIVDFASHDEAKEAMKKDREKIGPRYI 365
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + NGR GEA+++ K+ + A+ H + +G RYI
Sbjct: 17 DDIISFFHDCRIRGGKRGIYFPQGS-NGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYI 75
>gi|313233607|emb|CBY09778.1| unnamed protein product [Oikopleura dioica]
Length = 425
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 17/105 (16%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHT---------GIVEGK-------KDDIAQFFDGLEII 51
++ DRYIE+FK +EMD+ L+ T +V+ + D I QF L+I
Sbjct: 87 QLQDRYIEIFKATTEEMDYVLEKTERQANQPWENVVKLRGVPYKCTSDRIRQFLRELDIP 146
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ +V D GR TGEA+VQ E AE AL KHKE I RYI
Sbjct: 147 AHGVVMVTDA-RGRNTGEAFVQLKSHEHAEQALLKHKECIDRRYI 190
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 34/121 (28%)
Query: 9 VSDRYIEVFKVRRQEMDWK---------------------------------LQHTGIVE 35
+ RYIEVFK R EM +Q GI
Sbjct: 185 IDRRYIEVFKATRAEMSQASQSLHNHCNGDHYYSQQNSSLKGVGLDGVYRHVVQMRGIPF 244
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
++ + F GL+ + + E + RPTG A V F E AE A++K KE +G RY
Sbjct: 245 RATEEQVRSFFGLDFEISAVQF-EIGADHRPTGRASVAFPTHEDAEKAMKKDKECMGKRY 303
Query: 96 I 96
I
Sbjct: 304 I 304
>gi|402580830|gb|EJW74779.1| hypothetical protein WUBG_14313, partial [Wuchereria bancrofti]
Length = 292
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K++I +FF+ LEI GI + D ++G+P GEA+V F+D E+A AL K+KE I HRY+
Sbjct: 40 KEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVD 99
Query: 98 FTGHRYTVQHRA 109
Y RA
Sbjct: 100 IYPSSYGEMLRA 111
>gi|194376648|dbj|BAG57470.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 56/118 (47%), Gaps = 32/118 (27%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAY 71
RY+EVFK EMDW +TL D F GR TGEA+
Sbjct: 81 RYVEVFKSNSVEMDW----------------------------MTLPVD-FQGRSTGEAF 111
Query: 72 VQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPRCETSIPVSSSTHKPG 126
VQF +E AE AL+KHKERIGHRYI F R V+ + PR ++ +PG
Sbjct: 112 VQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPG 169
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E +LAL+K +E +GHRY+
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 257 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 312
>gi|170592721|ref|XP_001901113.1| Heterogeneous nuclear ribonucleoprotein H' [Brugia malayi]
gi|158591180|gb|EDP29793.1| Heterogeneous nuclear ribonucleoprotein H', putative [Brugia
malayi]
Length = 385
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K++I +FF+ LEI GI + D ++G+P GEA+V F+D E+A AL K+KE I HRY+
Sbjct: 123 KEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVD 182
Query: 98 FTGHRYTVQHRA 109
Y RA
Sbjct: 183 IYPSSYGEMLRA 194
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DD+ +FF I L +D +GR +GE +V F +E + AL K K+ IG RY+
Sbjct: 19 EDDLREFFGEAARSITQIKLTKD-RDGRASGEGFVVFSSREDYDFALTKDKKYIGKRYV 76
>gi|213513203|ref|NP_001135339.1| G-rich sequence factor 1 [Salmo salar]
gi|209734348|gb|ACI68043.1| G-rich sequence factor 1 [Salmo salar]
Length = 400
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 15/99 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHT-------GIVEGK-------KDDIAQFFDGLEIISNGITL 57
RYIEVF+V + + L+ + G+V + + D+ FF GL++ +G+TL
Sbjct: 171 RYIEVFEVTNSDAETILKKSVQLPARDGVVRIRGLPYSCTETDVMLFFSGLDVAEDGVTL 230
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D + GR +GEAYVQF+ +E A+ AL + ++ IG+RYI
Sbjct: 231 VTD-YRGRNSGEAYVQFLTQEQADEALTRDRQVIGNRYI 268
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
EVF +R + + W +D+ QFF + +G+ + N G+P G+A++
Sbjct: 99 EVFIIRAKGLPWSC--------TTEDLLQFFSECRV-RDGVKGIHLTVNRDGKPNGQAFI 149
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ AL+KH++ +G RYI
Sbjct: 150 ELEHEDDVGKALEKHRQYLGPRYI 173
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 43/128 (33%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKK------------------------------ 38
+ +RYIEVF RR E+ + + + EG+
Sbjct: 263 IGNRYIEVFPSRRSEIGGRKKTESVEEGRNSIQSQPHRPAAQPSRHGSHPVSSLPQHFVH 322
Query: 39 ----------DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHK 88
DDI QFF L + LVE +GR +GEA V F + A A+ + K
Sbjct: 323 MRGLPFQATGDDIVQFFSPLAL---SRILVEFGPDGRASGEADVYFTSHQDAVSAMTRDK 379
Query: 89 ERIGHRYI 96
+ RYI
Sbjct: 380 AHMQERYI 387
>gi|410923501|ref|XP_003975220.1| PREDICTED: G-rich sequence factor 1-like [Takifugu rubripes]
Length = 380
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 15/99 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQHT-------GIV-------EGKKDDIAQFFDGLEIISNGITL 57
RY+EV++V + + ++ G+V K DIAQFF L+I+ NGIT+
Sbjct: 159 RYVEVYEVTESDAEAIMEKATGSQADDGVVRLRGLPFSSTKADIAQFFSDLDIVENGITI 218
Query: 58 VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ D GR +GEA+VQF KE AE AL + + +G RYI
Sbjct: 219 ITD-HAGRNSGEAFVQFFSKEEAEKALLRDRAVMGTRYI 256
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
EVF V+ + + W D+ +FF I +G+ + N GRPTG A++
Sbjct: 87 EVFIVQVKGLLWSC--------TPQDLLKFFSDCRI-RDGVKGIHFTLNKMGRPTGIAFI 137
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ D+E AL+KH++ +G RY+
Sbjct: 138 EMEDEEDVNKALEKHRQYLGPRYV 161
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ FF L ++S L+E +GRP+GEA V F E A A+ + +E IG RYI
Sbjct: 316 EDVVNFFRPL-VVSK--MLMEFGPDGRPSGEADVYFGRHEDAVAAMSRDREHIGGRYI 370
>gi|324527735|gb|ADY48838.1| Heterogeneous nuclear ribonucleoprotein F, partial [Ascaris suum]
Length = 166
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKD------------------------DIAQF 44
+S RYIEVF V E+ W ++H I + DI +F
Sbjct: 1 MSSRYIEVFSVSESEVSWMIRHGVIKSADSNGTSTGTSNNYVVRLRGIPFSATVADIKEF 60
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
F GL++ +++ GRP+GEA+V+ KE AELAL++ K +G RY+
Sbjct: 61 FSGLDVAD---VVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYV 109
>gi|324507711|gb|ADY43264.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 435
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 27/113 (23%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQH--------TGIVEGKKD----------------DIAQ 43
E+S RYIEVF V E+ W ++H G G + DI +
Sbjct: 70 EMSSRYIEVFSVSESEVSWMIRHGVIKSADSNGTSTGTSNNYVVRLRGIPFSATVADIKE 129
Query: 44 FFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
FF GL++ + + ++P GRP+GEA+V+ +K+ AE+AL+++K+ +G RY+
Sbjct: 130 FFSGLDVAD--VVIDKEP-GGRPSGEAFVRLANKQHAEMALERNKKNMGTRYV 179
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DD+ F GL + S TL GR +GE YV+ D E A + K+ + RY
Sbjct: 19 AKEDDVRNFLQGLYVRSVTFTLTA---TGRASGECYVELTDAAAVEEAKKFDKKEMSSRY 75
Query: 96 I 96
I
Sbjct: 76 I 76
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI FF L + + ED RP+G+AYV F A AL ++K+ IG RYI F
Sbjct: 290 DIEDFFKPLNCVEIRLGYNEDR---RPSGDAYVLFSTMAEARDALSRNKKSIGTRYIELF 346
Query: 99 TG 100
+G
Sbjct: 347 SG 348
>gi|393908924|gb|EFO28044.2| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 370
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K++I +FF+ LEI GI + D ++G+P GEA+V F D+++A AL K+KE I HRY+
Sbjct: 123 KEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFTDEDSASKALAKNKEYIQHRYVD 182
Query: 98 FTGHRYTVQHRA 109
Y RA
Sbjct: 183 IYPSSYGEMLRA 194
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DD+ +FF I L +D +GR +GE YV F +E + AL K K+ IG RY+
Sbjct: 19 EDDLREFFGEAARSITQIKLTKD-RDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYV 76
>gi|168037998|ref|XP_001771489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677216|gb|EDQ63689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
+++TG+V + DI FF G++++++GI L +GRPTGEA+V+FV++ETA
Sbjct: 140 MRYTGVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHA-DGRPTGEAFVEFVNEETA 198
Query: 81 ELALQKHKERIGHRYI 96
A+Q H+E +G RY+
Sbjct: 199 ARAMQLHREPMGSRYV 214
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+ DIA FF GLE+ +G+ + + F GR TG+AYVQF E A AL+++++ IG RYI
Sbjct: 34 ESDIADFFKGLEMGPDGVVICVN-FQGRSTGQAYVQFASAELANKALERNRQHIGSRYIE 92
Query: 97 FFTGHRYTVQ 106
F GH +Q
Sbjct: 93 VFKGHPADMQ 102
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I FF+G + NGI +V + RPTGEA+V+F+ + A+ A+++H++ IG RYI
Sbjct: 306 EIMDFFEGYSFLPNGIHIVMGATD-RPTGEAFVEFMSSDEAQRAMERHRQNIGSRYI 361
>gi|327274272|ref|XP_003221902.1| PREDICTED: g-rich sequence factor 1-like [Anolis carolinensis]
Length = 485
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 20/116 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEII 51
+ RY+EVF++ +++D ++ + G+V + + DI+ FF GL II
Sbjct: 220 LGQRYVEVFEIHNEDVDAIMKSLQSSSTSVTNDGVVRLRGLPYSCTEVDISDFFSGLSII 279
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEA+VQF E A AL KHKE IG+RYI F R ++
Sbjct: 280 D--ITFVMDQRGRRKTGEAFVQFATPEMANQALLKHKEEIGNRYIEIFPSQRSEIR 333
>gi|358342654|dbj|GAA27695.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 295
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 20 RRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
RR + D L+ G+ K I FF+G EI+ +GI L+ D +GRPTGEA+VQFV E
Sbjct: 7 RRPKPDGTLRLFGLPFSVTKAQIQAFFEGFEIVKDGIGLLTD-HHGRPTGEAFVQFVSPE 65
Query: 79 TAELALQKHKERIGHRYI 96
A LA KHK I RY+
Sbjct: 66 VARLAAGKHKHLIDGRYV 83
>gi|312065923|ref|XP_003136024.1| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 383
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K++I +FF+ LEI GI + D ++G+P GEA+V F D+++A AL K+KE I HRY
Sbjct: 123 KEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFTDEDSASKALAKNKEYIQHRYCS 182
Query: 98 FT 99
T
Sbjct: 183 LT 184
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DD+ +FF I L +D +GR +GE YV F +E + AL K K+ IG RY+
Sbjct: 19 EDDLREFFGEAARSITQIKLTKD-RDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYV 76
>gi|350529357|ref|NP_001121205.2| G-rich RNA sequence binding factor 1 [Xenopus laevis]
Length = 440
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI FF GL+I GIT V D GR +GEA+VQF+ +E A+ AL KHK+ IG RYI F
Sbjct: 225 DIIHFFSGLDIADEGITFVLDQ-RGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 283
Query: 99 TGHRYTVQ 106
R VQ
Sbjct: 284 PSRRNDVQ 291
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQ 73
+F VR + + W DD+ FFD + NG V FN G+P G+A ++
Sbjct: 93 MFIVRVRGLPWSC--------TADDVLNFFDDSNV-RNGTDGVHFIFNRDGKPRGDAVIE 143
Query: 74 FVDKETAELALQKHKERIGHRYI 96
F E + A+++HK+ +G RY+
Sbjct: 144 FESAEDVQKAVEQHKKYMGQRYV 166
>gi|324509132|gb|ADY43846.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 192
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 27/116 (23%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEG-----------------------KKDDIAQF 44
E++ RYIEVF V E+ ++H G++ G DDI +F
Sbjct: 68 EINGRYIEVFTVSEGELAMMVRH-GVIRGSGESESRYASNYVVRLRGLPYSANVDDIKEF 126
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTG 100
F GL++ +++ GRP+GEA+V+ KE AELAL++ K +G RY F G
Sbjct: 127 FKGLDVAD---VVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYGFSQG 179
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+ D+ F G+ S TL +GR +GE YV+ D + AL+ + I RY
Sbjct: 17 AKESDVRNFLQGITAKSITFTLTS---SGRASGECYVELNDNSAVKEALKLDRNEINGRY 73
Query: 96 I 96
I
Sbjct: 74 I 74
>gi|34533956|dbj|BAC86863.1| unnamed protein product [Homo sapiens]
Length = 447
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + ++DI FF GL I+
Sbjct: 187 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEEDIVDFFAGLNIVD-- 244
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 245 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 297
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 115 DVFLIRAQGLPWSC--------TMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 165
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 166 EMESEQDVQKALEKHRMYMGQRYV 189
>gi|169641981|gb|AAI60694.1| LOC100158276 protein [Xenopus laevis]
Length = 348
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI FF GL+I GIT V D GR +GEA+VQF+ +E A+ AL KHK+ IG RYI F
Sbjct: 133 DIIHFFSGLDIADEGITFVLDQ-RGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 191
Query: 99 TGHRYTVQ 106
R VQ
Sbjct: 192 PSRRNDVQ 199
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQ 73
+F VR + + W DD+ FFD + NG V FN G+P G+A ++
Sbjct: 1 MFIVRVRGLPWSC--------TADDVLNFFDDSNV-RNGTDGVHFIFNRDGKPRGDAVIE 51
Query: 74 FVDKETAELALQKHKERIGHRYI 96
F E + A+++HK+ +G RY+
Sbjct: 52 FESAEDVQKAVEQHKKYMGQRYV 74
>gi|126330654|ref|XP_001364439.1| PREDICTED: g-rich sequence factor 1 isoform 1 [Monodelphis
domestica]
Length = 478
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIV-------EGKKDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + DI FF GL II
Sbjct: 219 RYVEVYEINNEDVDALMKSLQAKSNPAVNDGVVRLRGLPYSCNEKDIVDFFAGLNIID-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D + TGEAYVQF + E A AL KHKE IG+RYI F R V+
Sbjct: 277 ITFVMDHRGRKKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIFPSRRNEVR 329
>gi|344244475|gb|EGW00579.1| G-rich sequence factor 1 [Cricetulus griseus]
Length = 621
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 266 RYVEVYEINNEDVDALMKSLHVKSSPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 323
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 324 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 376
>gi|354495968|ref|XP_003510100.1| PREDICTED: G-rich sequence factor 1-like [Cricetulus griseus]
Length = 457
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 197 RYVEVYEINNEDVDALMKSLHVKSSPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 254
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPRCE 113
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ +
Sbjct: 255 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 314
Query: 114 TSIPVSSSTHK 124
VSS T K
Sbjct: 315 AKKMVSSPTAK 325
>gi|395541913|ref|XP_003772881.1| PREDICTED: G-rich sequence factor 1 [Sarcophilus harrisii]
Length = 441
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 182 RYVEVYEINNEDVDALMKSLQAKSNPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 239
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KHKE IG+RYI F R V+
Sbjct: 240 ITFVMDHRGRRKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIFPSRRNEVR 292
>gi|332819574|ref|XP_526590.3| PREDICTED: G-rich sequence factor 1 [Pan troglodytes]
Length = 547
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 302 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 359
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 360 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 412
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 230 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 280
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 281 EMESEQDVQKALEKHRMYMGQRYV 304
>gi|380812104|gb|AFE77927.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
gi|380812106|gb|AFE77928.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
>gi|312094676|ref|XP_003148104.1| hypothetical protein LOAG_12543 [Loa loa]
Length = 304
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 28/113 (24%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK------------------------DDIAQ 43
E++ RYIEVF V E+ ++H G+++G DDI +
Sbjct: 83 EINGRYIEVFSVSDAELLMMIRH-GVIKGSGGDADSRYASNFVVRLRGLPYSATIDDIKE 141
Query: 44 FFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
FF GLE+ +++ GRP+GEA+V+ KE AELAL++ K +G RY+
Sbjct: 142 FFSGLEVAD---AVIDKEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYV 191
>gi|288806582|ref|NP_001165773.1| G-rich RNA sequence binding factor 1 [Xenopus (Silurana)
tropicalis]
gi|189442327|gb|AAI67701.1| Unknown (protein for MGC:186196) [Xenopus (Silurana) tropicalis]
Length = 348
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI FF GL+I GIT V D GR +GEA+VQF+ +E A+ AL KHK+ IG RYI F
Sbjct: 133 DIIHFFSGLDIADEGITFVLDQ-RGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 191
Query: 99 TGHRYTVQ 106
R +Q
Sbjct: 192 PSRRNEIQ 199
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQ 73
+F VR + + W DD+ FF G + NG V FN G+P G+A ++
Sbjct: 1 MFIVRVRGLPWSC--------TADDVLNFF-GDSNVRNGTEGVHFIFNRDGKPRGDAVIE 51
Query: 74 FVDKETAELALQKHKERIGHRYI 96
F E + A+++HK+ +G RY+
Sbjct: 52 FESAEDVQKAVEQHKKYMGQRYV 74
>gi|388452478|ref|NP_001253931.1| G-rich sequence factor 1 [Macaca mulatta]
gi|383417775|gb|AFH32101.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
>gi|296196376|ref|XP_002745793.1| PREDICTED: G-rich sequence factor 1 [Callithrix jacchus]
Length = 479
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIV-------EGKKDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
>gi|63991866|gb|AAY40942.1| unknown [Homo sapiens]
gi|119626039|gb|EAX05634.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Homo sapiens]
Length = 435
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 220 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 277
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 278 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 148 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 198
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 199 EMESEQDVQKALEKHRMYMGQRYV 222
>gi|410227596|gb|JAA11017.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410268188|gb|JAA22060.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306352|gb|JAA31776.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306354|gb|JAA31777.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360388|gb|JAA44703.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360390|gb|JAA44704.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
Length = 481
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 221 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 278
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 279 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 331
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 149 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 199
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 200 EMESEQDVQKALEKHRMYMGQRYV 223
>gi|149193321|ref|NP_002083.3| G-rich sequence factor 1 isoform 1 [Homo sapiens]
Length = 480
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 220 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 277
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 278 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 148 DVFLIRAQGLPWSC--------TMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 198
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 199 EMESEQDVQKALEKHRMYMGQRYV 222
>gi|324506224|gb|ADY42662.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 416
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 27/112 (24%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK-----------------------DDIAQF 44
E++ RYIEVF V E+ ++H G++ G DDI +F
Sbjct: 68 EINGRYIEVFTVSEGELAMMVRH-GVIRGSGESESRYASNYVVRLRGLPYSANVDDIKEF 126
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
F GL++ +++ GRP+GEA+V+ KE AELAL++ K +G RY+
Sbjct: 127 FKGLDVAD---VVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYV 175
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+ D+ F G+ S TL +GR +GE YV+ D + AL+ + I RY
Sbjct: 17 AKESDVRNFLQGITAKSITFTLTS---SGRASGECYVELNDNSAVKEALKLDRNEINGRY 73
Query: 96 I 96
I
Sbjct: 74 I 74
>gi|441626116|ref|XP_003265953.2| PREDICTED: G-rich sequence factor 1 [Nomascus leucogenys]
Length = 539
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 20/116 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEII 51
+ RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 276 MGQRYVEVYEINNEDVDALMKSLEVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 335
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 336 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 389
>gi|215274142|sp|Q12849.3|GRSF1_HUMAN RecName: Full=G-rich sequence factor 1; Short=GRSF-1
Length = 480
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 220 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 277
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 278 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 148 DVFLIRAQGLPWSC--------TMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 198
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 199 EMESEQDVQKALEKHRMYMGQRYV 222
>gi|301768278|ref|XP_002919563.1| PREDICTED: g-rich sequence factor 1-like [Ailuropoda melanoleuca]
Length = 717
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 20/116 (17%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEII 51
+ RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 454 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 513
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 514 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 567
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E NG+ TGEA V F E A A+ K + + HR
Sbjct: 648 QANAQDIINFFAPLKPVR--ITM-EYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHR 704
Query: 95 YI 96
YI
Sbjct: 705 YI 706
>gi|344284915|ref|XP_003414210.1| PREDICTED: G-rich sequence factor 1 [Loxodonta africana]
Length = 484
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 224 RYVEVYEINNEDVDALMKSLQVKASPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 281
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 282 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 334
>gi|296486434|tpg|DAA28547.1| TPA: G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 406
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 221 RYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 278
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 279 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 331
>gi|402869627|ref|XP_003898853.1| PREDICTED: G-rich sequence factor 1 [Papio anubis]
Length = 606
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 321 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLHIVD-- 378
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 379 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 431
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+V+ +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 249 DVYLIRAQGLPWSC--------TMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 299
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 300 EMESEQDVQKALEKHRMYMGQRYV 323
>gi|193784859|dbj|BAG54012.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 199 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 256
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 257 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 309
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 127 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 177
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 178 EMESEQDVQKALEKHRMYMGQRYV 201
>gi|118151012|ref|NP_001071439.1| G-rich sequence factor 1 [Bos taurus]
gi|117306552|gb|AAI26704.1| G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 481
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 221 RYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 278
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 279 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 331
>gi|311262314|ref|XP_003129120.1| PREDICTED: G-rich sequence factor 1-like [Sus scrofa]
Length = 479
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D +++ G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKNLHVKSTPVVNDGVVRLRGLPYSCNEKDIVDFFAGLHIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
>gi|291401649|ref|XP_002717080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like, partial
[Oryctolagus cuniculus]
Length = 482
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIV-------EGKKDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + DI FF GL I+
Sbjct: 222 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 279
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 280 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 332
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 150 DVFLIRAQGLPWSC--------TVEDVLSFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 200
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 201 EMESEQDVQKALEKHRMYMGQRYV 224
>gi|26337751|dbj|BAC32561.1| unnamed protein product [Mus musculus]
Length = 479
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNG 64
++ D +V+ +R Q + W +D+ FF I + NGI + + +G
Sbjct: 139 SKLGDEVDDVYLIRAQGLPWSC--------TVEDVLNFFSDCRIRNSENGIHFLLN-RDG 189
Query: 65 RPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+A ++ ++ + AL+KH+ +G RY+
Sbjct: 190 KRRGDALIEMESEQDVQKALEKHRMYMGQRYV 221
>gi|281427145|ref|NP_001094360.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 479
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
>gi|21748975|dbj|BAC03513.1| unnamed protein product [Homo sapiens]
Length = 415
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 155 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 212
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 213 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 265
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 83 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLNR-DGKRRGDALI 133
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 134 EMESEQDVQKALEKHRMYMGQRYV 157
>gi|517196|gb|AAC95399.1| G-rich sequence factor-1 [Homo sapiens]
Length = 424
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 164 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 221
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 222 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 274
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 92 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLNR-DGKRRGDALI 142
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 143 EMESEQDVQKALEKHRMYMGQRYV 166
>gi|26346715|dbj|BAC37006.1| unnamed protein product [Mus musculus]
Length = 479
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIV-------EGKKDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLTGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 336
Query: 109 APRCETSIP 117
+ +S P
Sbjct: 337 GKKMTSSPP 345
>gi|393910110|gb|EJD75743.1| RNA recognition domain-containing protein [Loa loa]
Length = 674
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 28/113 (24%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK------------------------DDIAQ 43
E++ RYIEVF V E+ ++H G+++G DDI +
Sbjct: 83 EINGRYIEVFSVSDAELLMMIRH-GVIKGSGGDADSRYASNFVVRLRGLPYSATIDDIKE 141
Query: 44 FFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
FF GLE+ +++ GRP+GEA+V+ KE AELAL++ K +G RY+
Sbjct: 142 FFSGLEVAD---AVIDKEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYV 191
>gi|148596934|ref|NP_848815.2| G-rich sequence factor 1 isoform 1 [Mus musculus]
gi|55976518|sp|Q8C5Q4.2|GRSF1_MOUSE RecName: Full=G-rich sequence factor 1; Short=GRSF-1
gi|26336891|dbj|BAC32129.1| unnamed protein product [Mus musculus]
gi|182888413|gb|AAI60216.1| G-rich RNA sequence binding factor 1 [synthetic construct]
Length = 479
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 219 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 276
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 277 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 336
Query: 109 APRCETSIP 117
+ +S P
Sbjct: 337 GKKMTSSPP 345
>gi|148673403|gb|EDL05350.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Mus musculus]
Length = 403
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 143 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 200
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 201 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 260
Query: 109 APRCETSIP 117
+ +S P
Sbjct: 261 GKKMTSSPP 269
>gi|193786243|dbj|BAG51526.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 152 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 209
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 210 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 262
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 80 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLNR-DGKRRGDALI 130
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 131 EMESEQDVQKALEKHRMYMGQRYV 154
>gi|26251966|gb|AAH40485.1| GRSF1 protein [Homo sapiens]
Length = 435
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 220 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVY-- 277
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 278 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 148 DVFLIRAQGLPWSCTM--------EDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 198
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 199 EMESEQDVQKALEKHRMYMGQRYV 222
>gi|73975377|ref|XP_532402.2| PREDICTED: G-rich sequence factor 1 [Canis lupus familiaris]
Length = 372
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 112 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 169
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 170 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 222
>gi|148673402|gb|EDL05349.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Mus musculus]
Length = 429
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 169 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 226
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 227 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 286
Query: 109 APRCETSIP 117
+ +S P
Sbjct: 287 GKKMTSSPP 295
>gi|355693777|gb|AER99447.1| G-rich RNA sequence binding factor 1 [Mustela putorius furo]
Length = 360
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 101 RYVEVYEINNEDVDALMKSLQVKASPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 158
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 159 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 211
>gi|281347672|gb|EFB23256.1| hypothetical protein PANDA_008197 [Ailuropoda melanoleuca]
Length = 362
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|410957462|ref|XP_003985346.1| PREDICTED: G-rich sequence factor 1 [Felis catus]
Length = 361
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPAVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|90084329|dbj|BAE91006.1| unnamed protein product [Macaca fascicularis]
Length = 318
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 58 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 115
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 116 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 175
Query: 109 APRCETSIPVSSSTHKP 125
+ TS P + +P
Sbjct: 176 GKKI-TSSPTAKYITEP 191
>gi|26354144|dbj|BAC40702.1| unnamed protein product [Mus musculus]
Length = 344
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 84 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 141
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 142 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 201
Query: 109 APRCETSIPVSSST 122
+ +S P T
Sbjct: 202 GKKMTSSPPTKYIT 215
>gi|349603147|gb|AEP99067.1| G-rich sequence factor 1-like protein, partial [Equus caballus]
Length = 361
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 101 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 158
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 159 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 211
>gi|338723562|ref|XP_001489151.2| PREDICTED: g-rich sequence factor 1 [Equus caballus]
Length = 362
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|148596982|ref|NP_001091946.1| G-rich sequence factor 1 isoform 2 [Mus musculus]
Length = 362
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-----HR 108
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+ H+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHK 219
Query: 109 APRCETSIPVSSST 122
+ +S P T
Sbjct: 220 GKKMTSSPPTKYIT 233
>gi|221041252|dbj|BAH12303.1| unnamed protein product [Homo sapiens]
Length = 448
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 188 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 245
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 246 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 298
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYV 72
+VF +R Q + W +D+ FF I + NGI + + +G+ G+A +
Sbjct: 116 DVFLIRAQGLPWSC--------TMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALI 166
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ ++ + AL+KH+ +G RY+
Sbjct: 167 EMESEQDVQKALEKHRMYMGQRYV 190
>gi|355687360|gb|EHH25944.1| G-rich sequence factor 1, partial [Macaca mulatta]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|355749346|gb|EHH53745.1| hypothetical protein EGM_14439, partial [Macaca fascicularis]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|426231834|ref|XP_004009942.1| PREDICTED: G-rich sequence factor 1 [Ovis aries]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLHVKSAPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|221040122|dbj|BAH11824.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|221042436|dbj|BAH12895.1| unnamed protein product [Homo sapiens]
Length = 393
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 133 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 190
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 191 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 243
>gi|151555768|gb|AAI49234.1| GRSF1 protein [Bos taurus]
Length = 362
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|149193319|ref|NP_001091947.1| G-rich sequence factor 1 isoform 2 [Homo sapiens]
gi|119626036|gb|EAX05631.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626037|gb|EAX05632.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626038|gb|EAX05633.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|193786999|dbj|BAG51822.1| unnamed protein product [Homo sapiens]
gi|193787731|dbj|BAG52934.1| unnamed protein product [Homo sapiens]
gi|193788237|dbj|BAG53131.1| unnamed protein product [Homo sapiens]
gi|193788520|dbj|BAG53414.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 58 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 115
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 116 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 168
>gi|440905001|gb|ELR55451.1| G-rich sequence factor 1, partial [Bos grunniens mutus]
Length = 362
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|397475207|ref|XP_003809035.1| PREDICTED: G-rich sequence factor 1 [Pan paniscus]
Length = 362
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|426344574|ref|XP_004038836.1| PREDICTED: G-rich sequence factor 1 [Gorilla gorilla gorilla]
Length = 362
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 102 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 159
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 160 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>gi|149033731|gb|EDL88527.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ G+V + + DI FF GL I+
Sbjct: 21 RYVEVYEINNEDVDALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 78
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 79 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 131
>gi|431900090|gb|ELK08023.1| G-rich sequence factor 1 [Pteropus alecto]
Length = 380
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------GIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D +++ G+V + + DI FF GL I+
Sbjct: 115 RYVEVYEINNEDVDALMKNLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 172
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 173 ITFVMDFRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 225
>gi|395857260|ref|XP_003801023.1| PREDICTED: G-rich sequence factor 1 [Otolemur garnettii]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
+Y+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 268 QYVEVYEINNEDVDALMKSLQVKSPPAVNDGVVRLRGLPYSCDEKDIVDFFAGLNIVD-- 325
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 326 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 378
>gi|168015582|ref|XP_001760329.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688343|gb|EDQ74720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+ DIA FF GLE+ +G+ + + F GR TG+AYVQF E A AL+++++ IG RYI
Sbjct: 34 ESDIADFFKGLEMGPDGVVICVN-FQGRSTGQAYVQFATAELANKALERNRQHIGSRYIE 92
Query: 97 FFTGHRYTVQ 106
F GH +Q
Sbjct: 93 VFKGHPADMQ 102
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
+++TG+V + DI FF G++++++GI L +GRPTGEA+V+F ++E A
Sbjct: 140 MRYTGVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHA-DGRPTGEAFVEFANEEIA 198
Query: 81 ELALQKHKERIGHRYI 96
A+Q H+E +G RY+
Sbjct: 199 ARAMQLHREPMGSRYV 214
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I FF+G I+ NGI +V + RPTGEA+V+F+ + A+ A+++H++ IG RYI
Sbjct: 306 EIMDFFEGYNILPNGIHIVMGATD-RPTGEAFVEFISSDEAQRAMERHRQNIGSRYI 361
>gi|410905415|ref|XP_003966187.1| PREDICTED: epithelial splicing regulatory protein 1-like [Takifugu
rubripes]
Length = 741
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ +V D + +R + + W + DIA+FF GL I G+ L +
Sbjct: 223 GTCKMEKVCDSTV----IRARGLPW--------QSSDQDIARFFRGLNIAKGGVALCLNA 270
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+F+++E +LALQ+HK +G+RYI
Sbjct: 271 -QGRRNGEALVRFINEEHRDLALQRHKHHMGNRYI 304
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI F VQ R
Sbjct: 372 DGILFVRYP-DGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNR 430
Query: 112 CETS--IPVSSS 121
++ IPV+ +
Sbjct: 431 YSSAPLIPVAPA 442
>gi|349804479|gb|AEQ17712.1| putative heterogeneous nuclear ribonucleoprotein h1 [Hymenochirus
curtipes]
Length = 154
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI
Sbjct: 1 GITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 42
>gi|302794117|ref|XP_002978823.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
gi|300153632|gb|EFJ20270.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
Length = 478
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF G+++ +GI L +GRPTGEA+V+F+++ETA A+Q H+E +G RY+
Sbjct: 154 DIMAFFKGMQVAPDGIFLCTHA-DGRPTGEAFVEFINEETAARAMQLHREPMGSRYV 209
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI +FF GL++ +GI + + F GR TG+AYVQF E A +L+++++ IG RYI F
Sbjct: 36 DIKEFFRGLDLGPDGIVICVN-FQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVF 94
Query: 99 TGHRYTVQ 106
GH +Q
Sbjct: 95 KGHPADMQ 102
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I +FF G I+ NGI +V + RPTGEA+V+F+ + A+ A+++H+ IG RYI
Sbjct: 294 EITEFFQGYRIVPNGIYVVIGATD-RPTGEAFVEFISSKEAQRAMERHRNNIGSRYI 349
>gi|302805965|ref|XP_002984733.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
gi|300147715|gb|EFJ14378.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
Length = 483
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF G+++ +GI L +GRPTGEA+V+F+++ETA A+Q H+E +G RY+
Sbjct: 154 DIMAFFKGMQVAPDGIFLCTHA-DGRPTGEAFVEFINEETAARAMQLHREPMGSRYV 209
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI +FF GL++ +GI + + F GR TG+AYVQF E A +L+++++ IG RYI F
Sbjct: 36 DIKEFFRGLDLGPDGIVICVN-FQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVF 94
Query: 99 TGHRYTVQ 106
GH +Q
Sbjct: 95 KGHPADMQ 102
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I +FF G I+ NGI +V + RPTGEA+V+F+ + A+ A+++H+ IG RYI
Sbjct: 294 EITEFFQGYRIVPNGIYVVIGATD-RPTGEAFVEFISSKEAQRAMERHRNNIGSRYI 349
>gi|347968776|ref|XP_312018.5| AGAP002892-PA [Anopheles gambiae str. PEST]
gi|333467847|gb|EAA08189.6| AGAP002892-PA [Anopheles gambiae str. PEST]
Length = 589
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEG--------------KKDDIAQFFDGLEIIS-- 52
+ RYIE F ++ + LQ E KDD+ FF GL I +
Sbjct: 118 IGHRYIEFFNATEEQFEMALQEMDEGESGGPVVKMRGLPWTSTKDDVKAFFQGLTIKNGY 177
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGI L+ D GR +GEA V+F + AE A+ KHKE+IG+RYI
Sbjct: 178 NGILLLLDNL-GRASGEAIVEFATEADAETAMGKHKEKIGNRYI 220
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+D+I F G+ I+ I P R TGEAY++ + A ++K+ IGHRYI
Sbjct: 67 EDEIRSFLHGVNILHVHICF--HPQTKRQTGEAYIRVPTQADRNKAFSRNKQTIGHRYIE 124
Query: 98 F 98
F
Sbjct: 125 F 125
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 65 RPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR 102
RP+GE F KE A A++K KE++G RYI F G R
Sbjct: 518 RPSGEGDAYFETKEEAIKAMRKDKEKMGSRYIELFAGQR 556
>gi|170586440|ref|XP_001897987.1| RNA recognition motif. [Brugia malayi]
gi|158594382|gb|EDP32966.1| RNA recognition motif [Brugia malayi]
Length = 573
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK-------------------------DDIA 42
E++ RYIEVF V E+ ++H G+++ DDI
Sbjct: 67 EINGRYIEVFSVSDAELLMMIRH-GVIKSSGGGDADSRYASNFVVRLRGLPYSATIDDIK 125
Query: 43 QFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+FF GLE+ +++ GRP+GEA+V+ KE AELAL++ K +G RY+
Sbjct: 126 EFFSGLEVAD---AVIDKEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYV 176
>gi|383856881|ref|XP_003703935.1| PREDICTED: uncharacterized protein LOC100878893 [Megachile
rotundata]
Length = 1212
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+FV+KE
Sbjct: 755 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPM-GRRNGEALVRFVNKE 805
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 806 HRDMALKRHKHHMGGRYI 823
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 888 DGVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYI 930
>gi|328779875|ref|XP_397080.4| PREDICTED: epithelial splicing regulatory protein 2 [Apis
mellifera]
Length = 1215
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+FV+KE
Sbjct: 758 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPM-GRRNGEALVRFVNKE 808
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 809 HRDMALKRHKHHMGGRYI 826
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 891 DGVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYI 933
>gi|324975474|gb|ADY62662.1| putative RNA-binding protein [Hottentotta judaicus]
Length = 180
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA+FF GL I+ G+ L P GR GEA V+FV++E ++AL++HK IG RYI
Sbjct: 13 DIAKFFRGLNIVRGGVALCLSP-QGRRNGEALVRFVNQEHRDMALKRHKHHIGQRYI 68
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D + Q D E G+ V P +GR TG+A+V F +E A ALQKH++ IG RYI
Sbjct: 123 DIVCQVMDSEE----GVLFVRKP-DGRATGDAFVLFETEEMAGKALQKHRQVIGSRYI 175
>gi|74214262|dbj|BAE40375.1| unnamed protein product [Mus musculus]
Length = 512
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDNET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
>gi|327276493|ref|XP_003223004.1| PREDICTED: epithelial splicing regulatory protein 2-like [Anolis
carolinensis]
Length = 714
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E DR +R + + W + DIA+FF GL I G+ L +
Sbjct: 217 GPCSKSETVDRET---VIRARGLPW--------QSSDQDIARFFKGLNIAKGGVALCLNA 265
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV+ E +LAL++HK +G RYI
Sbjct: 266 -QGRRNGEALVRFVNSEQRDLALERHKHHMGSRYI 299
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K +E I G +++AQF GL +
Sbjct: 294 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATPEDVL 347
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 348 GFLGPECPVTGEKEGLLFVKYP-DGRPTGDAFVLFACEEFAQNALKKHKEILGKRYI 403
>gi|146197828|dbj|BAF57627.1| hnRNP F protein [Dugesia japonica]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 12 RYIEVFKVRR-----QEMDWKLQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVE 59
R+IEVF + +EM KL V + K+DI FF L I +G+ L+
Sbjct: 69 RFIEVFPATQKDWFGEEMRMKLSDMTYVRLRGLPYDVTKEDIFIFFSRLMISRDGVGLLY 128
Query: 60 DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIP-- 117
P + PTGEA+VQF+ +E A LALQ+H + I RYI T +RA + I
Sbjct: 129 GP-DDVPTGEAFVQFMTREDANLALQRHNQCIRSRYIEIYKSSLTEVYRAMEKQYEINRE 187
Query: 118 --VSSSTHKPG 126
+ S H+P
Sbjct: 188 EILRRSRHRPA 198
>gi|348526958|ref|XP_003450986.1| PREDICTED: epithelial splicing regulatory protein 1 [Oreochromis
niloticus]
Length = 738
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV +E ELALQ+HK +G+R
Sbjct: 260 QSSDQDIARFFRGLNIAKGGVALCLNA-QGRRNGEALVRFVSEEHRELALQRHKHHMGNR 318
Query: 95 YI 96
YI
Sbjct: 319 YI 320
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI F VQ R
Sbjct: 388 DGILFVRYP-DGRPTGDAFVLFACEEHAQCALRKHKEILGKRYIELFKSTAAEVQQVLNR 446
Query: 112 CETSIPVSSSTHKP 125
+S P+ S P
Sbjct: 447 -YSSTPLISVAPAP 459
>gi|28849887|ref|NP_789808.1| epithelial splicing regulatory protein 2 [Mus musculus]
gi|81914552|sp|Q8K0G8.1|ESRP2_MOUSE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|21618665|gb|AAH31444.1| RNA binding motif protein 35b [Mus musculus]
gi|148679398|gb|EDL11345.1| RNA binding motif protein 35b [Mus musculus]
Length = 717
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDNET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|301775691|ref|XP_002923260.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Ailuropoda melanoleuca]
gi|281349933|gb|EFB25517.1| hypothetical protein PANDA_012380 [Ailuropoda melanoleuca]
Length = 723
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 241 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 289
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 290 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 323
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 384 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 427
>gi|432909348|ref|XP_004078165.1| PREDICTED: epithelial splicing regulatory protein 1-like [Oryzias
latipes]
Length = 656
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ +V D + +R + + W + DIA+FF GL I G L +
Sbjct: 233 GTCKKEKVCDNTV----IRARGLPW--------QSSDQDIARFFRGLNIAKGGAALCLNA 280
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G+RYI
Sbjct: 281 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYI 314
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+GI V P +GRPTG+A+V F +E A AL+KHKE +G RYI F VQ R
Sbjct: 382 DGILFVRYP-DGRPTGDAFVLFSCEEHALCALRKHKEILGKRYIELFKSTAAEVQQVLNR 440
Query: 112 CETS--IPVSSS 121
++ IPV+ +
Sbjct: 441 YSSTPLIPVAPA 452
>gi|329664166|ref|NP_001192614.1| epithelial splicing regulatory protein 2 [Bos taurus]
Length = 717
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|73957227|ref|XP_851504.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Canis lupus familiaris]
Length = 717
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 421
>gi|291390369|ref|XP_002711679.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oryctolagus cuniculus]
Length = 719
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 237 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 285
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 286 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 319
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 380 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 423
>gi|410983807|ref|XP_003998228.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Felis catus]
Length = 717
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 421
>gi|395853861|ref|XP_003799417.1| PREDICTED: epithelial splicing regulatory protein 2 [Otolemur
garnettii]
Length = 715
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 233 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 281
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 282 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGIRYI 315
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 376 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 419
>gi|355686618|gb|AER98119.1| epithelial splicing regulatory protein 2 [Mustela putorius furo]
Length = 650
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 169 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 217
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 218 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 251
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 312 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 355
>gi|417404143|gb|JAA48844.1| Putative rna-binding protein fusilli [Desmodus rotundus]
Length = 717
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFF--------------------DGLEII 51
RYIEV+K +E I G ++A+F D LE +
Sbjct: 315 RYIEVYKATGEEF------VKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPADVLEFL 368
Query: 52 ---------SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 369 GPECPVTGGADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|402585392|gb|EJW79332.1| hypothetical protein WUBG_09760 [Wuchereria bancrofti]
Length = 236
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 28/112 (25%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK------------------------DDIA 42
E++ RYIEVF V E+ ++H G+++G DDI
Sbjct: 71 NEINGRYIEVFSVSDAELLMMIRH-GVIKGSGGDADSRYASNFVVRLRGLPYSATIDDIK 129
Query: 43 QFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+FF GLE+ +++ GRP+GEA+V+ KE AELAL++ K +G R
Sbjct: 130 EFFSGLEVAD---AVIDKEPGGRPSGEAFVRLATKEYAELALERSKNYMGSR 178
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D + FF GL S TL NGR +GE YV+ D+E + A + + I RYI
Sbjct: 23 RDFLQVFFFGLNAKSITFTLTS---NGRASGECYVELDDQEAVKEAQKLDRNEINGRYI 78
>gi|426242551|ref|XP_004015136.1| PREDICTED: epithelial splicing regulatory protein 2 [Ovis aries]
Length = 591
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 109 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 157
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 158 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 191
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 252 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 295
>gi|256087258|ref|XP_002579790.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350644185|emb|CCD61054.1| heterogeneous nuclear ribonucleoprotein-related [Schistosoma
mansoni]
Length = 1009
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I QFF G+ I GI+LV GR GEA +QF D E LAL+KHK +G RYI
Sbjct: 389 EIFQFFSGINIAKGGISLVLSKI-GRRNGEALIQFADAEQQSLALRKHKHHVGKRYI 444
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+NGI V P +GR TG+A+V F K AE AL+ +K+ IG RYI
Sbjct: 509 ANGILFVNKP-DGRATGDAFVIFETKIVAEKALENNKQHIGSRYI 552
>gi|440905418|gb|ELR55795.1| Epithelial splicing regulatory protein 2, partial [Bos grunniens
mutus]
Length = 759
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 270 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 318
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 319 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 352
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 420 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 463
>gi|313227785|emb|CBY22933.1| unnamed protein product [Oikopleura dioica]
Length = 559
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF GL I S G++LV + NGR +GEA ++F + E LALQ+H++ +G+RYI
Sbjct: 148 DLAKFFRGLNIPSGGVSLVLNQ-NGRRSGEALIRFENSEHRNLALQRHRQHMGNRYI 203
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIV----------------------EGKKDDIAQFFD 46
+ +RYIEVFK +D+ + G + K+DI QF
Sbjct: 198 MGNRYIEVFKA--PSIDFIQMNAGTLPQVERFLGQGSVAIARMRGLPFSASKEDILQFLC 255
Query: 47 GLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ I++ +GI L++ G+PTG+A+V ++ A AL +HK + RY+
Sbjct: 256 EIHIVNGRDGIFLIKTA-EGKPTGDAFVLLASEDDAVQALGRHKANLRDRYV 306
>gi|431912397|gb|ELK14531.1| Epithelial splicing regulatory protein 2 [Pteropus alecto]
Length = 698
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 259 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 307
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 308 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 341
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHK 88
++G+ V P +GRPTG+A+ F +E A+ AL++HK
Sbjct: 402 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHK 437
>gi|332227572|ref|XP_003262966.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Nomascus leucogenys]
Length = 717
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKAMLGKRYI 421
>gi|297699056|ref|XP_002826613.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Pongo abelii]
Length = 717
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|194208736|ref|XP_001498922.2| PREDICTED: epithelial splicing regulatory protein 2-like [Equus
caballus]
Length = 659
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 177 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 225
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 226 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 259
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 320 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 363
>gi|403290547|ref|XP_003936375.1| PREDICTED: epithelial splicing regulatory protein 2 [Saimiri
boliviensis boliviensis]
Length = 715
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 233 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 281
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 282 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 315
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 376 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 419
>gi|402908821|ref|XP_003917133.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Papio anubis]
Length = 715
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 233 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 281
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 282 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 315
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 376 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 419
>gi|344290717|ref|XP_003417084.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Loxodonta africana]
Length = 717
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++FVD E +LALQ+HK +G R
Sbjct: 257 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFVDSEQRDLALQRHKHHMGIR 315
Query: 95 YI 96
YI
Sbjct: 316 YI 317
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL+ + +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRSXQGMLGKRYI 421
>gi|195037855|ref|XP_001990376.1| GH18272 [Drosophila grimshawi]
gi|193894572|gb|EDV93438.1| GH18272 [Drosophila grimshawi]
Length = 622
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ TG +V+ + + I +FF GLEI ++ GI
Sbjct: 132 RYIEVFTATPKEAKEAMRKTGGHGHAFVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGIL 191
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 192 FVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 230
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F +E+I S GI LV +G+ TGEAYV+
Sbjct: 63 IRLRGLPWSATHKEILD--------FLVNVEVINGSQGIHLVTSRVDGKNTGEAYVEVAS 114
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 115 QEDVEEARKLNKVSMGHRYI 134
>gi|114663263|ref|XP_511052.2| PREDICTED: epithelial splicing regulatory protein 2 isoform 2 [Pan
troglodytes]
Length = 717
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|109128999|ref|XP_001098015.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 1
[Macaca mulatta]
Length = 715
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 233 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 281
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 282 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 315
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 376 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 419
>gi|395512150|ref|XP_003760307.1| PREDICTED: epithelial splicing regulatory protein 1 [Sarcophilus
harrisii]
Length = 550
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ V D I VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCKMELVDDNTI----VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G+RYI
Sbjct: 261 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYI 294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 289 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVL 342
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 343 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 398
>gi|296478109|tpg|DAA20224.1| TPA: fusilli-like [Bos taurus]
Length = 717
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++FVD E +LALQ+HK +G R
Sbjct: 257 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFVDSEQRDLALQRHKHHMGVR 315
Query: 95 YI 96
YI
Sbjct: 316 YI 317
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|397487054|ref|XP_003814628.1| PREDICTED: epithelial splicing regulatory protein 2, partial [Pan
paniscus]
Length = 713
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 231 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 279
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 280 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 313
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 374 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 417
>gi|426382629|ref|XP_004057906.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 717
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 TEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|45935393|ref|NP_079215.2| epithelial splicing regulatory protein 2 [Homo sapiens]
gi|20988380|gb|AAH30146.1| Epithelial splicing regulatory protein 2 [Homo sapiens]
gi|119603622|gb|EAW83216.1| RNA binding motif protein 35B, isoform CRA_c [Homo sapiens]
Length = 717
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL + G+ L +
Sbjct: 235 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 TEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|444709335|gb|ELW50356.1| Epithelial splicing regulatory protein 2 [Tupaia chinensis]
Length = 848
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 366 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFRGLNIARGGVALCLNA 414
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 415 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 448
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI F VQ
Sbjct: 509 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQALT 567
Query: 111 RCETS 115
R +S
Sbjct: 568 RYASS 572
>gi|410983809|ref|XP_003998229.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Felis catus]
Length = 726
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL I G+ L + GR GEA ++FVD E
Sbjct: 258 VRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFVDSE 308
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 309 QRDLALQRHKHHMGVRYI 326
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 387 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 430
>gi|195395450|ref|XP_002056349.1| GJ10899 [Drosophila virilis]
gi|194143058|gb|EDW59461.1| GJ10899 [Drosophila virilis]
Length = 615
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 21/144 (14%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ TG +V+ + + I +FF GLEI ++ GI
Sbjct: 132 RYIEVFVATPKEAKEAMRKTGGHGHAFVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGIL 191
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSI 116
V D GR TGEA+VQF ++ E AL +++E+IGHRYI RA T
Sbjct: 192 FVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMKRA----TGG 246
Query: 117 PVSSSTHKPGRHHTLD-GPNGGGT 139
+PG + D G N GG
Sbjct: 247 GGGGGGGRPGPYDIRDRGANRGGN 270
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F +E++ S GI LV +G+ TGEAYV+
Sbjct: 63 IRLRGLPWSATHKEILD--------FLVNVEVLNGSQGIHLVTSRVDGKNTGEAYVEVAS 114
Query: 77 KETAELALQKHKERIGHRYI 96
++ E A + +K +GHRYI
Sbjct: 115 QDDVEEARKLNKASMGHRYI 134
>gi|348572536|ref|XP_003472048.1| PREDICTED: epithelial splicing regulatory protein 2 [Cavia
porcellus]
Length = 719
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 237 GPCSKADVVDSET---VVRARGLPW--------QSSDQDVARFFRGLNIARGGVALCLNA 285
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D+E +LALQ+HK +G RYI
Sbjct: 286 -QGRRNGEALIRFTDREQRDLALQRHKHHMGVRYI 319
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI F VQ
Sbjct: 380 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 438
Query: 111 RCETSIPVSSSTHKP 125
R +S P+ S P
Sbjct: 439 RYASS-PLLPSLTAP 452
>gi|198454671|ref|XP_002137931.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
gi|198132901|gb|EDY68489.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
Length = 610
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ G +V+ + + I +FF GLEI ++ GI
Sbjct: 123 RYIEVFTATPKEAKEAMRKIGGHGNAFVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGIL 182
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF +E E AL +++E+IGHRYI
Sbjct: 183 FVMDR-RGRATGEAFVQFESQEDTEQALGRNREKIGHRYI 221
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 54 IRLRGLPWSATHKEILD--------FLENVNVTNASQGIHLVTSRVDGKNTGEAYVEVAT 105
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 106 QEDVEEARKLNKASMGHRYI 125
>gi|291232399|ref|XP_002736133.1| PREDICTED: fusilli-like [Saccoglossus kowalevskii]
Length = 636
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL+I G+ L +P GR GEA V+F E +LALQ+HK +GHR
Sbjct: 230 QSSDKDVAKFFKGLDIGKGGVALCLNP-QGRRNGEALVRFTCTEHRDLALQRHKHHLGHR 288
Query: 95 YI 96
YI
Sbjct: 289 YI 290
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 38 KDDIAQFFDGLEI--ISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
KD + F D + G+ V P +GR TG+A+V F + A AL KHKE +G RY
Sbjct: 336 KDVLVFFGDECPVSGAEEGVLFVRYP-DGRSTGDAFVLFSTEANATSALAKHKENLGSRY 394
Query: 96 I 96
I
Sbjct: 395 I 395
>gi|332227574|ref|XP_003262967.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Nomascus leucogenys]
Length = 727
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 259 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 309
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 310 QRDLALQRHKHHMGVRYI 327
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKAMLGKRYI 431
>gi|195108109|ref|XP_001998635.1| GI24079 [Drosophila mojavensis]
gi|193915229|gb|EDW14096.1| GI24079 [Drosophila mojavensis]
Length = 605
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ TG +V+ + + I +FF GLEI ++ GI
Sbjct: 130 RYIEVFVATPKEAKEAMRKTGGHGHAFVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGIL 189
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 190 FVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 228
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F +E++ S GI LV +G+ TGEAYV+
Sbjct: 61 IRLRGLPWSATHKEILD--------FLVNVEVLNGSQGIHLVTSRLDGKNTGEAYVEVAS 112
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 113 QEDVEEARKLNKASMGHRYI 132
>gi|402908823|ref|XP_003917134.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Papio anubis]
Length = 725
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 257 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 307
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 308 QRDLALQRHKHHMGVRYI 325
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 386 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 429
>gi|297699054|ref|XP_002826612.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Pongo abelii]
Length = 727
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 259 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 309
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 310 QRDLALQRHKHHMGVRYI 327
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 431
>gi|157129243|ref|XP_001655329.1| hypothetical protein AaeL_AAEL011420 [Aedes aegypti]
gi|108872264|gb|EAT36489.1| AAEL011420-PA [Aedes aegypti]
Length = 894
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA V+FV +E ++AL++HK IG+R
Sbjct: 276 QSSDQDIARFFRGLNVAKGGVALCLSP-QGRRNGEALVRFVSQEHRDMALKRHKHHIGNR 334
Query: 95 YI 96
YI
Sbjct: 335 YI 336
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++GI V+ P +GR TG+A+V F + A AL KH+E IG RYI
Sbjct: 400 ADGILFVKKP-DGRATGDAFVLFSQETDAPKALSKHRESIGQRYI 443
>gi|158301007|ref|XP_320791.4| AGAP011722-PA [Anopheles gambiae str. PEST]
gi|157013433|gb|EAA00060.4| AGAP011722-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA V+FV +E ++AL++HK IG+R
Sbjct: 215 QSSDQDIAKFFRGLNVAKGGVALCLSP-QGRRNGEALVRFVSQEHRDMALKRHKHHIGNR 273
Query: 95 YI 96
YI
Sbjct: 274 YI 275
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++GI V+ P +GR TG+A+V F A AL KH+E IG RYI
Sbjct: 339 ADGILFVKKP-DGRATGDAFVLFEQDSDASKALSKHRESIGQRYI 382
>gi|47225436|emb|CAG11919.1| unnamed protein product [Tetraodon nigroviridis]
Length = 751
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 262 QSSDQDIARFFRGLNIAKGGVALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 320
Query: 95 YI 96
YI
Sbjct: 321 YI 322
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI F VQ R
Sbjct: 390 DGILFVRYP-DGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNR 448
Query: 112 CETS--IPVSSS 121
++ IPV+ +
Sbjct: 449 YSSAPLIPVAPA 460
>gi|297284292|ref|XP_002802581.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 2
[Macaca mulatta]
Length = 725
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 257 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 307
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 308 QRDLALQRHKHHMGVRYI 325
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 386 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 429
>gi|114663265|ref|XP_001167050.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1 [Pan
troglodytes]
Length = 727
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 259 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 309
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 310 QRDLALQRHKHHMGVRYI 327
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 431
>gi|334312966|ref|XP_003339804.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Monodelphis domestica]
Length = 1253
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C EV D VR + + W + DIA+FF GL I G
Sbjct: 766 GPCSKAEVVDNET---VVRARGLPW--------QSSDQDIARFFKGLNIAKGGRGPCAXN 814
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR TGEA V+FVD E +L+L++HK +G RYI
Sbjct: 815 AQGRRTGEALVRFVDSEQRDLSLERHKHHMGARYI 849
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 36/118 (30%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN-------- 53
RYIEV+K +E I G ++AQF GL +
Sbjct: 847 RYIEVYKASGEEF------LKIAGGTSHEVAQFLSREDQVIIRMRGLPFTATPGDVLAFL 900
Query: 54 -----------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTG 100
G+ V P +GRPTG+A+ F +E A+ AL+KHK +G RYI +G
Sbjct: 901 GPECPVTGGPEGLLFVHYP-DGRPTGDAFALFACEELAQGALRKHKGILGKRYIELSG 957
>gi|426382631|ref|XP_004057907.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 727
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 259 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 309
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 310 QRDLALQRHKHHMGVRYI 327
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 TEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 431
>gi|74761482|sp|Q9H6T0.1|ESRP2_HUMAN RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|10438126|dbj|BAB15173.1| unnamed protein product [Homo sapiens]
gi|119603620|gb|EAW83214.1| RNA binding motif protein 35B, isoform CRA_a [Homo sapiens]
Length = 727
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 259 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 309
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 310 QRDLALQRHKHHMGVRYI 327
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 TEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 431
>gi|355756893|gb|EHH60501.1| hypothetical protein EGM_11873, partial [Macaca fascicularis]
Length = 635
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 167 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 217
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 218 QRDLALQRHKHHMGVRYI 235
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 296 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 339
>gi|355710319|gb|EHH31783.1| hypothetical protein EGK_12921, partial [Macaca mulatta]
Length = 688
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + D+A+FF GL + G+ L + GR GEA ++FVD E
Sbjct: 220 VRARGLPW--------QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSE 270
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 271 QRDLALQRHKHHMGVRYI 288
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 349 AEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 392
>gi|195124401|ref|XP_002006681.1| GI18454 [Drosophila mojavensis]
gi|193911749|gb|EDW10616.1| GI18454 [Drosophila mojavensis]
Length = 1008
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 312 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVSQEHRDMALKRHKHHIGSR 370
Query: 95 YI 96
YI
Sbjct: 371 YI 372
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
S G+ V+ P +GR TG+A+V F ++ + AL +H+E IG RYI
Sbjct: 436 SEGVLFVKKP-DGRATGDAFVLFANESDSPKALGRHRESIGQRYI 479
>gi|332029325|gb|EGI69308.1| RNA-binding protein fusilli [Acromyrmex echinatior]
Length = 677
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+F++KE
Sbjct: 191 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPM-GRRNGEALVRFINKE 241
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 242 HRDMALKRHKHHMGARYI 259
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 42 AQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
Q DG +G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 317 CQVLDG----EDGVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYI 366
>gi|312385573|gb|EFR30037.1| hypothetical protein AND_00606 [Anopheles darlingi]
Length = 1660
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+FV +E
Sbjct: 247 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSP-QGRRNGEALVRFVSQE 297
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 298 HRDMALKRHKHHIGSRYI 315
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++GI V+ P +GR TG+A+V F + AL KH+E IG RYI
Sbjct: 379 ADGILFVKKP-DGRATGDAFVLFEQESDVNKALSKHRELIGQRYI 422
>gi|403281341|ref|XP_003945266.1| PREDICTED: LOW QUALITY PROTEIN: G-rich sequence factor 1 [Saimiri
boliviensis boliviensis]
Length = 439
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 221 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIIDFFAGLNIVD-- 278
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
IT V D R TGEAYVQF + E A AL KH+E IG+R +
Sbjct: 279 ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRXV 320
>gi|195381217|ref|XP_002049351.1| GJ21539 [Drosophila virilis]
gi|194144148|gb|EDW60544.1| GJ21539 [Drosophila virilis]
Length = 982
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVSQEHRDMALKRHKHHIGSR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ + AL +H+E IG RYI
Sbjct: 413 NEGVLFVKKP-DGRATGDAFVLFANESDSSKALGRHRESIGQRYI 456
>gi|449277356|gb|EMC85572.1| Epithelial splicing regulatory protein 2 [Columba livia]
Length = 721
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV+ E +LAL++HK +G R
Sbjct: 251 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFVNSEQRDLALERHKHHMGSR 309
Query: 95 YI 96
YI
Sbjct: 310 YI 311
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K +E I G +++AQF GL +
Sbjct: 306 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVL 359
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 360 GFLGPECPVTGGKEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYI 415
>gi|432852904|ref|XP_004067443.1| PREDICTED: epithelial splicing regulatory protein 2-like [Oryzias
latipes]
Length = 695
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 4 CRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN 63
C+T V + +R + + W + DIA+FF GL I G+ L +
Sbjct: 172 CKTEPVDSETV----IRARGLPW--------QSSDQDIARFFKGLNIAKGGVALCLNA-Q 218
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+F+D E +LAL++HK +G RYI
Sbjct: 219 GRRNGEALVRFIDSEHRDLALERHKHHMGCRYI 251
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K +E I G +++AQF GL E++S
Sbjct: 249 RYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATSQEVLSFL 302
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E + AL+KHK+ +G RYI
Sbjct: 303 GPESPVTDGAEGLLFVKYP-DGRPTGDAFVLFSCEEYVQNALKKHKQILGKRYI 355
>gi|198461689|ref|XP_001362087.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
gi|198137420|gb|EAL26667.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
Length = 910
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 308 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVSQEHRDMALKRHKHHIGAR 366
Query: 95 YI 96
YI
Sbjct: 367 YI 368
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI F VQ
Sbjct: 432 NEGVLFVKKP-DGRATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVLN 490
Query: 111 RCETSIPVSSSTH 123
R +S+H
Sbjct: 491 RSMDPKTFETSSH 503
>gi|363730887|ref|XP_418338.3| PREDICTED: epithelial splicing regulatory protein 1 [Gallus gallus]
Length = 636
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV++E +LALQ+HK +G+R
Sbjct: 235 QSSDQDIAKFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVNEEHRDLALQRHKHHMGNR 293
Query: 95 YI 96
YI
Sbjct: 294 YI 295
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVL 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P + RPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 AFFGQHCPVTGGKEGVLFVTYP-DSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYI 399
>gi|307196545|gb|EFN78075.1| RNA-binding protein 35A [Harpegnathos saltator]
Length = 760
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+F++KE
Sbjct: 191 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPM-GRRNGEALVRFINKE 241
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 242 HRDMALKRHKHHMGARYI 259
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 324 DGVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYI 366
>gi|195171791|ref|XP_002026687.1| GL11864 [Drosophila persimilis]
gi|194111613|gb|EDW33656.1| GL11864 [Drosophila persimilis]
Length = 830
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA ++FV +E
Sbjct: 300 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVSQE 350
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 351 HRDMALKRHKHHIGARYI 368
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
S G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 432 SEGVLFVKKP-DGRATGDAFVLFANEGDAPKALGRHRESIGQRYI 475
>gi|307181801|gb|EFN69244.1| RNA-binding protein 35A [Camponotus floridanus]
Length = 762
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+F++KE
Sbjct: 189 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPM-GRRNGEALVRFINKE 239
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 240 HRDMALKRHKHHMGPRYI 257
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 42 AQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
Q DG E G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 315 CQVLDGEE----GVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDLIGSRYI 364
>gi|195056424|ref|XP_001995099.1| GH22967 [Drosophila grimshawi]
gi|193899305|gb|EDV98171.1| GH22967 [Drosophila grimshawi]
Length = 1007
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVSQEHRDMALKRHKHHIGSR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ + AL +H+E IG RYI
Sbjct: 413 NEGVLFVKKP-DGRATGDAFVLFANECDSSKALGRHRESIGQRYI 456
>gi|71895579|ref|NP_001025737.1| epithelial splicing regulatory protein 2 [Gallus gallus]
gi|75571416|sp|Q5ZLR4.1|ESRP2_CHICK RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|53128733|emb|CAG31329.1| hypothetical protein RCJMB04_5c3 [Gallus gallus]
Length = 701
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV+ E +LAL++HK +G R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFVNSEQRDLALERHKHHMGSR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K +E I G +++AQF GL +
Sbjct: 291 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVL 344
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 345 GFLGPECPVTGGKEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYI 400
>gi|326927219|ref|XP_003209790.1| PREDICTED: epithelial splicing regulatory protein 2-like [Meleagris
gallopavo]
Length = 701
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV+ E +LAL++HK +G R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFVNSEQRDLALERHKHHMGSR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K +E I G +++AQF GL +
Sbjct: 291 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVL 344
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 345 GFLGPECPVTGGKEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYI 400
>gi|351714130|gb|EHB17049.1| Epithelial splicing regulatory protein 2 [Heterocephalus glaber]
Length = 719
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++F D+E +LALQ+HK +G R
Sbjct: 302 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFTDREQRDLALQRHKHHMGVR 360
Query: 95 YI 96
YI
Sbjct: 361 YI 362
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHK 88
++G+ V P +GRPTG+A+ F +E A+ AL++HK
Sbjct: 423 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHK 458
>gi|195583688|ref|XP_002081648.1| GD25607 [Drosophila simulans]
gi|194193657|gb|EDX07233.1| GD25607 [Drosophila simulans]
Length = 628
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA ++FV +E
Sbjct: 281 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQE 331
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 332 HRDMALKRHKHHIGTRYI 349
>gi|194756410|ref|XP_001960472.1| GF13378 [Drosophila ananassae]
gi|190621770|gb|EDV37294.1| GF13378 [Drosophila ananassae]
Length = 885
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++F+ +E ++AL++HK IG R
Sbjct: 292 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFISQEHRDMALKRHKHHIGTR 350
Query: 95 YI 96
YI
Sbjct: 351 YI 352
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F + A AL +H+E IG RYI
Sbjct: 417 NEGVLFVKKP-DGRATGDAFVLFAHESDAAKALGRHRESIGQRYI 460
>gi|195442063|ref|XP_002068780.1| GK17961 [Drosophila willistoni]
gi|194164865|gb|EDW79766.1| GK17961 [Drosophila willistoni]
Length = 864
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 304 QSSDQDIAKFFCGLNVAKGGVALCLSPL-GRRNGEALIRFVSQEHRDMALKRHKHHIGAR 362
Query: 95 YI 96
YI
Sbjct: 363 YI 364
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D DG E G+ V+ P +GR TG+A+V F + A AL +H+E IG RYI
Sbjct: 419 DSPCSVLDGTE----GVLFVKKP-DGRATGDAFVLFALEADAPKALGRHRESIGQRYI 471
>gi|52346028|ref|NP_001005057.1| epithelial splicing regulatory protein 1 [Xenopus (Silurana)
tropicalis]
gi|82182765|sp|Q6DEZ7.1|ESRP1_XENTR RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|49899931|gb|AAH76946.1| MGC89324 protein [Xenopus (Silurana) tropicalis]
Length = 687
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 291 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVL 344
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P N RPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 345 AFFGQQCPVTGGKEGILFVTYPDN-RPTGDAFVLFACEEYAQNALKKHKELLGKRYI 400
>gi|148223399|ref|NP_001079524.1| epithelial splicing regulatory protein 1 [Xenopus laevis]
gi|82241595|sp|Q7ZY29.1|ESRP1_XENLA RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|27694832|gb|AAH44002.1| MGC53361 protein [Xenopus laevis]
Length = 688
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 291 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVL 344
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P N RPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 345 AFFGQQCPVTGGKEGILFVTYPDN-RPTGDAFVLFACEEYAQNALKKHKELLGKRYI 400
>gi|17865825|ref|NP_524691.1| fusilli, isoform D [Drosophila melanogaster]
gi|24653906|ref|NP_725481.1| fusilli, isoform E [Drosophila melanogaster]
gi|24653908|ref|NP_725482.1| fusilli, isoform F [Drosophila melanogaster]
gi|75021514|sp|Q9BJZ5.1|FUSIL_DROME RecName: Full=RNA-binding protein fusilli
gi|13183640|gb|AAK15280.1|AF321979_1 fusilli [Drosophila melanogaster]
gi|21645395|gb|AAM70981.1| fusilli, isoform D [Drosophila melanogaster]
gi|21645396|gb|AAM70982.1| fusilli, isoform E [Drosophila melanogaster]
gi|21645397|gb|AAM70983.1| fusilli, isoform F [Drosophila melanogaster]
Length = 967
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQEHRDMALKRHKHHIGTR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 414 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 457
>gi|195445396|ref|XP_002070305.1| GK11105 [Drosophila willistoni]
gi|194166390|gb|EDW81291.1| GK11105 [Drosophila willistoni]
Length = 642
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ G +V+ + + I +FF GLEI ++ GI
Sbjct: 125 RYIEVFTATPKEAKEAMRKIGGHANAFVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGIL 184
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 185 FVTDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 223
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 56 IRLRGLPWSATHKEILD--------FLENVNVTNGSQGIHLVTSRVDGKNTGEAYVEVAS 107
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 108 QEDVEEARKLNKASMGHRYI 127
>gi|229485446|sp|B2RYJ8.1|ESRP2_RAT RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|187469463|gb|AAI66804.1| Rbm35b protein [Rattus norvegicus]
Length = 716
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ V + + VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCKADVVDNETV----VRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 282
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D E +LALQ+HK +G RYI
Sbjct: 283 -QGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYI 316
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 DGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 420
>gi|440906249|gb|ELR56534.1| Epithelial splicing regulatory protein 1, partial [Bos grunniens
mutus]
Length = 715
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 264 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 314
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 315 HRDLALQRHKHHMGSRYI 332
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 327 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVV 380
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 381 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 436
>gi|449284112|gb|EMC90693.1| Epithelial splicing regulatory protein 1 [Columba livia]
Length = 529
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 158 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGSR 216
Query: 95 YI 96
YI
Sbjct: 217 YI 218
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 36/120 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 213 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVL 266
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFT 99
+ G+ V P + RPTG+A+V F +E A+ AL+KHK+ +G R + T
Sbjct: 267 AFFGQHCPVTGGKEGVLFVTYP-DSRPTGDAFVLFACEEYAQNALKKHKDLLGKRRLSVT 325
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 39 DDIAQFFD--GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRY 95
+DI +F +I ++G+ +V + GRP+G+A++Q E A LA QK HK+ + RY
Sbjct: 381 EDILEFLGEFSTDIRTHGVHMVLN-HQGRPSGDAFIQMKSAERAFLAAQKCHKKTMKDRY 439
Query: 96 I 96
+
Sbjct: 440 V 440
>gi|313244027|emb|CBY14897.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FFDG I GI + NG GEA VQF DKE+A+ AL++HK+ +G RYI
Sbjct: 132 DIRDFFDGCSISPGGIVICLGQ-NGSANGEALVQFDDKESADQALERHKKNMGQRYI 187
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
F VR + + W K +I +F + S+ I + +GRP+GEA V
Sbjct: 17 AFAVRLRGLPWS--------ATKQEICEFLENRPDESSVIICLGR--DGRPSGEALVGLY 66
Query: 76 DKETAELALQKHKERIGHRYI 96
D ++ ELA KHKE +G RY+
Sbjct: 67 DSDSFELAKSKHKENLGRRYV 87
>gi|157818053|ref|NP_001100893.1| epithelial splicing regulatory protein 2 [Rattus norvegicus]
gi|149038076|gb|EDL92436.1| RNA binding motif protein 35b (predicted) [Rattus norvegicus]
Length = 717
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDNET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYI 317
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 379 DGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>gi|298710505|emb|CBJ25569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 670
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 23/108 (21%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQ-----------HTGIV-------EGKKDDIAQFFDGLEI 50
+ RYIEVF+ ++++ L + G+V + DI FFDG+ I
Sbjct: 107 IGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAI 166
Query: 51 ISNGI--TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+GI TL D GRP+GEAYV F +E A+ AL++ K++IG R+I
Sbjct: 167 EKDGIHVTLNRD---GRPSGEAYVVFETEEAAKEALKRDKDKIGERWI 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 30 HTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAEL 82
+TG+V E K I FFDG+ + + I +V P +G+ +GEA+V F + AE
Sbjct: 246 YTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRP-DGKASGEAFVLFSTEAEAEK 304
Query: 83 ALQKHKERIGHRYI 96
AL K KE++G R+I
Sbjct: 305 ALLKDKEKLGDRWI 318
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++I FF+GL +I G + +D RPTGE +V+F + +LA+ +++E + RY+
Sbjct: 467 ENNIFSFFEGLTVI--GSFICKDVM-ARPTGEGFVEFATVDDCQLAMSRNRESMMDRYV 522
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRYI 96
++I FF G ++ +G+ +V + RPTGE+YV F ++ AE A + K++IG R+I
Sbjct: 362 EEIRTFFRGYKVQEHGVFVVNGG-DWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWI 419
>gi|344250517|gb|EGW06621.1| Epithelial splicing regulatory protein 1 [Cricetulus griseus]
Length = 677
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 75 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 125
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 126 HRDLALQRHKHHMGTRYI 143
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 141 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 194
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F
Sbjct: 195 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 253
Query: 102 RYTVQHRAPRCETSIPVSSS 121
VQ P + I + S+
Sbjct: 254 AAEVQQGRPSGDAFIQMKSA 273
>gi|405977012|gb|EKC41485.1| Dual specificity mitogen-activated protein kinase kinase 5
[Crassostrea gigas]
Length = 672
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 27/109 (24%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTG-----------IVEGK-------KDDIAQFFDGLE 49
E+ +RYIE+ +E D+K + G +V+ K K DIA FF G E
Sbjct: 83 EIGNRYIEIL----EETDFKRIYPGYTPPTPQEKGTLVKLKGLPFGCTKQDIATFFSGFE 138
Query: 50 IISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +GI P TGEAYV+F KE AE AL +H E +G RYI
Sbjct: 139 IAPHGIM---KPVKRHASLTGEAYVKFASKEIAEKALTRHNEYMGSRYI 184
>gi|148667169|gb|EDK99585.1| mCG133010, isoform CRA_b [Mus musculus]
Length = 149
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 17/67 (25%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDP 61
ITL DP
Sbjct: 141 ITLPVDP 147
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCETS 115
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P S
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF GL+I+ GI L+ D GRP+G AYV+F E ALQ+H IG RYI
Sbjct: 259 DVGMFFSGLDIVPGGIHLIHD-HTGRPSGVAYVEFSSAEEVNNALQRHNGFIGSRYI 314
>gi|334321772|ref|XP_001372905.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 362
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K+ I FF GLE + +GI L D F G+ TG A VQF +E AE+A++KHK R RY+
Sbjct: 53 NKETIRHFFSGLETVPSGIILPVD-FQGKSTGTALVQFASQEAAEIAIRKHKGRPEPRYL 111
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DI FF L + I + ED G+ TGEA V FV E A A+ K K + HRYI
Sbjct: 225 NDIYHFFSPLCPLRVHIEIGED---GKATGEADVDFVTHEDAVAAMVKEKTYMQHRYI 279
>gi|384253335|gb|EIE26810.1| hypothetical protein COCSUDRAFT_46239 [Coccomyxa subellipsoidea
C-169]
Length = 877
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 26 WKLQHTGIVEGKK-DDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAEL 82
W L+ G+ G +D+ FF+G+EI S GI P +GRP GEAYV+F ++ +
Sbjct: 322 WVLRMRGLPYGATAEDVVHFFEGIEIERGSAGIAFTCTP-DGRPKGEAYVEFPSEDAQKE 380
Query: 83 ALQKHKERIGHRYI 96
AL++HK IG RYI
Sbjct: 381 ALKRHKNEIGDRYI 394
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 39 DDIAQFFDGLEIISNGITLVEDP---FNGRPTGEAYVQFVDKETAELAL-QKHKERIGHR 94
D+I FF G + S+GI +V P N TG AYV+F + E AE A ++H+ ++G R
Sbjct: 481 DEITSFFAGFSLASDGIQVVTKPDKEGNQLGTGVAYVRFGNPEEAERARKERHRAQMGAR 540
Query: 95 YIF---FTGHRYT 104
YI FT YT
Sbjct: 541 YIECLPFTASHYT 553
>gi|260819360|ref|XP_002605005.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
gi|229290334|gb|EEN61015.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
Length = 645
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ + +P GR GEA V+F KE +LAL +HK IG R
Sbjct: 224 QSSDQDIARFFRGLNITKGGVAVCLNP-QGRRNGEALVRFASKEHRDLALLRHKHHIGQR 282
Query: 95 YI 96
YI
Sbjct: 283 YI 284
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGR TG+A+V F + A+LAL KHKE +G RYI
Sbjct: 356 NGRSTGDAFVLFETEAYAQLALAKHKESLGKRYI 389
>gi|47217849|emb|CAG02342.1| unnamed protein product [Tetraodon nigroviridis]
Length = 776
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+F++ E +LAL++HK +G+R
Sbjct: 265 QSSDQDIARFFKGLSIARGGVALCLNA-QGRRNGEALVRFINSEHRDLALERHKHHMGNR 323
Query: 95 YI 96
YI
Sbjct: 324 YI 325
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K +E I G +++AQF GL E++
Sbjct: 320 MGNRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATPQEVL 373
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
S G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 374 SFLGPESPVTDGSEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYI 429
>gi|326917907|ref|XP_003205236.1| PREDICTED: epithelial splicing regulatory protein 1-like [Meleagris
gallopavo]
Length = 671
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + +R + + W + DIA+FF GL I G L +
Sbjct: 212 GPCSKMELVD---DNAVIRARGLPW--------QSSDQDIAKFFKGLNIAKGGAALCLNA 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV++E +LALQ+HK +G+RYI
Sbjct: 261 -QGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYI 294
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 289 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVL 342
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P + RPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 343 AFFGQHCPVTGGKEGVLFVTYP-DSRPTGDAFVLFACEEYAQNALKKHKDLLGRRYI 398
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 28 LQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK- 86
L + +E D + +F +I ++G+ +V + GRP+G+A++Q + A LA QK
Sbjct: 451 LPYAATIEDILDFLGEF--STDIRTHGVHMVLN-HQGRPSGDAFIQMKSADRAFLAAQKC 507
Query: 87 HKERIGHRYI 96
HK+ + RYI
Sbjct: 508 HKKTMKDRYI 517
>gi|444525895|gb|ELV14190.1| Epithelial splicing regulatory protein 1, partial [Tupaia
chinensis]
Length = 689
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 238 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 288
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 289 HRDLALQRHKHHMGTRYI 306
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 304 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 357
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 358 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 410
>gi|417412369|gb|JAA52574.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 701
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 247 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 297
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 298 HRDLALQRHKHHMGTRYI 315
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 313 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 366
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 367 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 419
>gi|417412016|gb|JAA52424.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 627
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 247 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 297
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 298 HRDLALQRHKHHMGTRYI 315
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 313 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 366
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 367 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 419
>gi|229462862|sp|Q3US41.2|ESRP1_MOUSE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 680
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ + D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCKMELIDDSTV----VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 261 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 292 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 345
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 346 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 398
>gi|74183823|dbj|BAE24496.1| unnamed protein product [Mus musculus]
Length = 680
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ + D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCKMELIDDSTV----VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 261 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 292 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 345
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 346 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 398
>gi|189230098|ref|NP_001121036.2| epithelial splicing regulatory protein 1 [Rattus norvegicus]
gi|187469151|gb|AAI66735.1| RGD1560481 protein [Rattus norvegicus]
Length = 659
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|24653901|ref|NP_725479.1| fusilli, isoform C [Drosophila melanogaster]
gi|21645394|gb|AAM70980.1| fusilli, isoform C [Drosophila melanogaster]
Length = 891
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQEHRDMALKRHKHHIGTR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 414 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 457
>gi|194882767|ref|XP_001975482.1| GG22342 [Drosophila erecta]
gi|190658669|gb|EDV55882.1| GG22342 [Drosophila erecta]
Length = 892
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQEHRDMALKRHKHHIGTR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F + A AL +H+E IG RYI
Sbjct: 414 NEGVLFVKKP-DGRATGDAFVLFAHESDASKALCRHRESIGQRYI 457
>gi|281363439|ref|NP_001163161.1| fusilli, isoform G [Drosophila melanogaster]
gi|272432494|gb|ACZ94433.1| fusilli, isoform G [Drosophila melanogaster]
Length = 860
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA ++FV +E
Sbjct: 281 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQE 331
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 332 HRDMALKRHKHHIGTRYI 349
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 416 GVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 457
>gi|195334671|ref|XP_002034000.1| GM20128 [Drosophila sechellia]
gi|194125970|gb|EDW48013.1| GM20128 [Drosophila sechellia]
Length = 885
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 282 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQEHRDMALKRHKHHIGTR 340
Query: 95 YI 96
YI
Sbjct: 341 YI 342
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 407 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 450
>gi|432118737|gb|ELK38193.1| Epithelial splicing regulatory protein 1 [Myotis davidii]
Length = 596
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 195 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 245
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 246 HRDLALQRHKHHMGTRYI 263
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 36/107 (33%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 261 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 314
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKE 89
GI V P +GRPTG+A+V F +E A+ AL+KHK+
Sbjct: 315 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKD 360
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 28 LQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK- 86
L + +E D + +F +I ++G+ +V + GRP+G+A++Q + A LA QK
Sbjct: 383 LPYAATIEDILDFLGEF--STDIRTHGVHMVLN-HQGRPSGDAFIQMKSADRAYLAAQKC 439
Query: 87 HKERIGHRYI 96
HK+ + RY+
Sbjct: 440 HKKTMKDRYV 449
>gi|354484335|ref|XP_003504344.1| PREDICTED: epithelial splicing regulatory protein 2 [Cricetulus
griseus]
Length = 707
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 225 GPCSKADVVDNET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 273
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D E +LALQ+HK +G RYI
Sbjct: 274 -QGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYI 307
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI F VQ
Sbjct: 368 ADGLLFVRHP-DGRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 426
Query: 111 RCETS 115
R TS
Sbjct: 427 RYATS 431
>gi|324504848|gb|ADY42090.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 282
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 12 RYIEVFKVRRQEMDWKL---------------QHTGIVEGK-------KDDIAQFFDGLE 49
RYIEVF ++++ + + T IV + D+I +FF +
Sbjct: 123 RYIEVFPASASDVEYNITGPERRLRMGISLPGRDTSIVRLRGLPYGCTNDEITRFFHPIP 182
Query: 50 IISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +NGI L D +G+ TG+A+V F + ++A AL++++ I HRYI
Sbjct: 183 IAANGIVLPYDHRSGKATGDAFVAFYEPDSAARALERNRNNIQHRYI 229
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++I FF + ITL ++ + RP+GEA+V F + E E AL + K+ +G RYI
Sbjct: 68 EEEIRIFFQPADRSIVKITLTKN-RDARPSGEAFVAFNNNEDYEYALTRDKQHMGKRYI 125
>gi|108743797|gb|ABG02207.1| IP16182p [Drosophila melanogaster]
Length = 694
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA ++FV +E
Sbjct: 281 VRARGLPW--------QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQE 331
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 332 HRDMALKRHKHHIGTRYI 349
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 414 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 457
>gi|397500915|ref|XP_003821148.1| PREDICTED: epithelial splicing regulatory protein 1-like [Pan
paniscus]
Length = 422
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C+ + D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCKMELIDDNTV----VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 261 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 294
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 37/137 (27%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 292 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 345
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F
Sbjct: 346 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 404
Query: 102 RYTVQHRAPRCETSIPV 118
VQ + + +P+
Sbjct: 405 AAEVQQVGFKNKYVVPL 421
>gi|7739445|gb|AAF68850.1|AF132362_1 hnRNP 2H9B [Homo sapiens]
gi|7739437|gb|AAF68844.1| hnRNP 2H9B [Homo sapiens]
Length = 297
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 28/35 (80%)
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 3 YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 37
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 159 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 214
>gi|344253993|gb|EGW10097.1| Epithelial splicing regulatory protein 2 [Cricetulus griseus]
Length = 697
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D VR + + W + D+A+FF GL I G+ L +
Sbjct: 215 GPCSKADVVDNET---VVRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 263
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D E +LALQ+HK +G RYI
Sbjct: 264 -QGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYI 297
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI F VQ
Sbjct: 358 ADGLLFVRHP-DGRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 416
Query: 111 RCETS 115
R TS
Sbjct: 417 RYATS 421
>gi|345326895|ref|XP_001507064.2| PREDICTED: epithelial splicing regulatory protein 1, partial
[Ornithorhynchus anatinus]
Length = 605
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 155 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 205
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G+RYI
Sbjct: 206 HRDLALQRHKHHMGNRYI 223
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ +RYIEV+K ++ I G +++AQF GL +
Sbjct: 218 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVS 271
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 272 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 327
>gi|119612126|gb|EAW91720.1| RNA binding motif protein 35A, isoform CRA_a [Homo sapiens]
Length = 503
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 75 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 133
Query: 95 YI 96
YI
Sbjct: 134 YI 135
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 133 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 186
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 187 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 239
>gi|224064269|ref|XP_002191895.1| PREDICTED: epithelial splicing regulatory protein 2 [Taeniopygia
guttata]
Length = 702
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E D +R + + W + DIA+FF GL I G+ L +
Sbjct: 214 GPCSKSETVDSET---VIRARGLPW--------QSSDQDIARFFKGLNIAKGGVALCLNS 262
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV+ E +LAL++HK +G RYI
Sbjct: 263 -QGRRNGEALVRFVNSEQRDLALERHKHHMGSRYI 296
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K +E I G +++AQF GL +
Sbjct: 291 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVL 344
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 345 GFLGSECPVTGGKEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYI 400
>gi|170587834|ref|XP_001898679.1| fusilli [Brugia malayi]
gi|158593949|gb|EDP32543.1| fusilli, putative [Brugia malayi]
Length = 467
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIAQFF GL I + G+ L P GR GEA V+F D E ELAL++H+ + +RYI
Sbjct: 41 DIAQFFIGLNIAAGGVALCLSP-EGRRNGEALVRFEDSEQRELALKRHRHFLHNRYI 96
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 41 IAQFF----DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF +G ++ GI V +GRPTG+A+V F ++E + AL KHK IG RYI
Sbjct: 145 ILEFFAEGENGCKVTDGGILFVNKS-DGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYI 203
>gi|449494990|ref|XP_002198687.2| PREDICTED: epithelial splicing regulatory protein 1 [Taeniopygia
guttata]
Length = 766
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + +R + + W + DIA+FF GL I G L +
Sbjct: 213 GPCSKMELVD---DNAVIRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G+RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYI 295
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVL 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P + RPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 TFFGQHCPVTGGKEGVLFVTYP-DSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYI 399
>gi|328716236|ref|XP_001946855.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 858
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L +GR GEA V+FV++E ++A+++HK IG R
Sbjct: 276 QSSDQDIAKFFRGLNIAKGGVALCLSA-HGRRNGEAVVRFVNQEHRDMAMKRHKHHIGSR 334
Query: 95 YI 96
YI
Sbjct: 335 YI 336
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 38 KDDIAQFFDGLEIIS-----NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIG 92
KD I F +G + S +G+ V+ P +GR TG+A+V F D++ A AL KH++ IG
Sbjct: 381 KDVITFFENGEQTCSVMDGEDGVLFVKKP-DGRATGDAFVLFADEDDAPKALSKHRDLIG 439
Query: 93 HRYI 96
RYI
Sbjct: 440 TRYI 443
>gi|403301377|ref|XP_003941367.1| PREDICTED: G-rich sequence factor 1-like [Saimiri boliviensis
boliviensis]
Length = 291
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K DI FF GL ++ IT V D + TGEAYVQF + E A AL KH+E IG+RYI
Sbjct: 67 KKDIVDFFAGLNTVA--ITFVMDYRGRQKTGEAYVQFEEPEMANQALLKHREEIGNRYI 123
>gi|334326246|ref|XP_001379501.2| PREDICTED: epithelial splicing regulatory protein 1 [Monodelphis
domestica]
Length = 677
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELVD---DNTIVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G+RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYI 295
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVL 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|25153681|ref|NP_741422.1| Protein HRPF-2 [Caenorhabditis elegans]
gi|351059337|emb|CCD74180.1| Protein HRPF-2 [Caenorhabditis elegans]
Length = 610
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEG---------------KKDDIAQFFDGLEIIS 52
E+S+RYIEVF V E +++ + G K+DD+ +FF+GLE
Sbjct: 125 EISNRYIEVFTVEADEAEFEFRPDPDSNGEVNHVIRLRGVPWSCKEDDVRKFFEGLEPPP 184
Query: 53 NGITL--VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I + P RP+GEA+V+F ++ AE A+ + +G RY+
Sbjct: 185 AEIVIGGTGGP-RSRPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYV 229
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I GRP GEAYV+F + E A A++ ++ I +RYI
Sbjct: 79 DIHEFFAGLTIERVKFVCT----TGRPNGEAYVEFKNTEEAGKAMENDRKEISNRYI 131
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTG 100
IA FF L S I + E GRP+G+A +F + ++AL ++ +R+G RY+
Sbjct: 341 IAAFFSPLRCHSVKIGINE---TGRPSGDAIAEFDNYNDLQVALSRNNQRMGRRYVELFD 397
Query: 101 HR 102
+R
Sbjct: 398 NR 399
>gi|170577075|ref|XP_001893871.1| RNA binding protein [Brugia malayi]
gi|158599846|gb|EDP37285.1| RNA binding protein, putative [Brugia malayi]
Length = 519
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRP 66
E+++RYIE + ++ ++ GI +D+ +FF GLE+ +++ GRP
Sbjct: 116 EMNNRYIE--GDQDTPYNFVVRLRGIPFSATNNDVKEFFSGLEVAD---VVIDKELGGRP 170
Query: 67 TGEAYVQFVDKETAELALQKHKERIGHRYI 96
+GEA+V+F K+ AE+AL++++ +G RY+
Sbjct: 171 SGEAFVRFASKQHAEMALERNRNNMGSRYV 200
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DD+ F +GLE+ S TL GR +GE YV+ VDK AE A + K+ + +RY
Sbjct: 65 AKEDDVRAFLEGLEVKSVTFTLTS---MGRASGECYVELVDKVAAEEAKRFDKQEMNNRY 121
Query: 96 I 96
I
Sbjct: 122 I 122
>gi|240849679|gb|ACS54296.1| RE48185p [Drosophila melanogaster]
Length = 860
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA ++FV +E
Sbjct: 281 VRARGLLW--------QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQE 331
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 332 HRDMALKRHKHHIGTRYI 349
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ VE P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 416 GVLFVEKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 457
>gi|321459051|gb|EFX70109.1| hypothetical protein DAPPUDRAFT_202511 [Daphnia pulex]
Length = 514
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L P GR GEA V+F+ E
Sbjct: 176 VRARGLPW--------QSSDQDIARFFRGLNVARGGVALCLSP-QGRRNGEALVRFISPE 226
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 227 HRDMALKRHKHHIGQRYI 244
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+GR TG+A+V F +E AL KH++ IG RYI
Sbjct: 320 DGRATGDAFVMFATEEEGSKALAKHRDIIGSRYI 353
>gi|21618692|gb|AAH31468.1| RNA binding motif protein 35A [Mus musculus]
Length = 444
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 53 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 101
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 102 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 135
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 133 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 186
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 187 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 239
>gi|194744433|ref|XP_001954699.1| GF16612 [Drosophila ananassae]
gi|190627736|gb|EDV43260.1| GF16612 [Drosophila ananassae]
Length = 600
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 41 IAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF GLEI ++ GI V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 165 IEEFFSGLEIKTDREGILFVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 221
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
+R + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 54 IRLRGLPWSATHKEILD--------FLENVNVTNGSQGIHLVTSRVDGKNTGEAYVEVST 105
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 106 QEDVEEARKLNKASMGHRYI 125
>gi|441647515|ref|XP_003268407.2| PREDICTED: epithelial splicing regulatory protein 1 [Nomascus
leucogenys]
Length = 821
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 375 GSCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 423
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 424 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 457
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 455 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 508
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 509 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 561
>gi|37747755|gb|AAH59280.1| Rbm35a protein, partial [Mus musculus]
Length = 490
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 95 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 143
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 144 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 177
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 175 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 228
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 229 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 281
>gi|134047877|sp|Q7ZVR8.2|ESRP2_DANRE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
Length = 736
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+F++ E ++AL +HK +G R
Sbjct: 234 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFINSEHRDMALDRHKHHMGSR 292
Query: 95 YI 96
YI
Sbjct: 293 YI 294
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEII------- 51
+ RYIEV+K +E I G +++AQF GL
Sbjct: 289 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATPQDVL 342
Query: 52 ------------SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 343 GFLGPECPVTDGTEGLLFVKYP-DGRPTGDAFVLFACEEYAQNALKKHKQILGKRYI 398
>gi|195571637|ref|XP_002103809.1| GD20630 [Drosophila simulans]
gi|194199736|gb|EDX13312.1| GD20630 [Drosophila simulans]
Length = 587
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ +V+ + + I +FF GLEI ++ GI
Sbjct: 120 RYIEVFTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSGLEIKTDREGIL 179
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 180 FVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 218
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 51 VRLRGLPWSATHKEILD--------FLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 103 QEDVEEARKLNKASMGHRYI 122
>gi|195329730|ref|XP_002031563.1| GM26067 [Drosophila sechellia]
gi|194120506|gb|EDW42549.1| GM26067 [Drosophila sechellia]
Length = 563
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEGK-------KDDIAQFFDGLEIISN--GIT 56
RYIEVF +E ++ +V+ + + I +FF GLEI ++ GI
Sbjct: 120 RYIEVFTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSGLEIKTDREGIL 179
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 180 FVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 218
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 51 VRLRGLPWSATHKEILD--------FLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 103 QEDVEEARKLNKASMGHRYI 122
>gi|148673702|gb|EDL05649.1| RNA binding motif protein 35A, isoform CRA_a [Mus musculus]
Length = 483
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 88 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 136
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 137 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 170
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 168 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 221
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 222 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 274
>gi|40548306|ref|NP_954966.1| epithelial splicing regulatory protein 2 [Danio rerio]
gi|28279592|gb|AAH45439.1| RNA binding motif protein 35B [Danio rerio]
Length = 736
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+F++ E ++AL +HK +G R
Sbjct: 234 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFINSEHRDMALDRHKHHMGSR 292
Query: 95 YI 96
YI
Sbjct: 293 YI 294
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEII------- 51
+ RYIEV+K +E I G +++AQF GL
Sbjct: 289 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATPQDVL 342
Query: 52 ------------SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 343 GFLGPECPVTDGTEGLLFVKYP-DGRPTGDAFVLFACEEYAQNALKKHKQILGKRYI 398
>gi|358252891|dbj|GAA50442.1| epithelial splicing regulatory protein 1/2 [Clonorchis sinensis]
Length = 846
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF GL I + GI+LV GR GEA ++F D+E +LAL+KHK +G RY+
Sbjct: 424 DIFHFFSGLNISNGGISLVLSKI-GRRNGEALIRFTDQEQRDLALRKHKHHMGQRYV 479
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGR TG+A+V F ++ E ALQ H + IG+RYI
Sbjct: 554 NGRATGDAFVIFENQAIGEKALQNHWQHIGNRYI 587
>gi|165972311|ref|NP_918944.2| epithelial splicing regulatory protein 1 [Mus musculus]
Length = 681
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 399
>gi|300795130|ref|NP_001179931.1| epithelial splicing regulatory protein 1 [Bos taurus]
gi|296480439|tpg|DAA22554.1| TPA: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 677
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYI 295
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVV 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|194901932|ref|XP_001980505.1| GG17187 [Drosophila erecta]
gi|190652208|gb|EDV49463.1| GG17187 [Drosophila erecta]
Length = 595
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 41 IAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF GLEI ++ GI V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 162 IEEFFSGLEIKTDREGILFVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 218
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 51 VRLRGLPWSATHKEILD--------FLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 103 QEDVEEARKLNKASMGHRYI 122
>gi|41351452|gb|AAH65688.1| Rbm35b protein [Danio rerio]
Length = 711
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+F++ E ++AL +HK +G R
Sbjct: 234 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFINSEHRDMALDRHKHHMGSR 292
Query: 95 YI 96
YI
Sbjct: 293 YI 294
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEII------- 51
+ RYIEV+K +E I G +++AQF GL
Sbjct: 289 MGSRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATPQDVL 342
Query: 52 ------------SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 343 GFLGPECPVTDGTEGLLFVKYP-DGRPTGDAFVLFACEEYAQNALKKHKQILGKRYI 398
>gi|195501785|ref|XP_002097942.1| GE10080 [Drosophila yakuba]
gi|194184043|gb|EDW97654.1| GE10080 [Drosophila yakuba]
Length = 597
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 41 IAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF GLEI ++ GI V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 163 IEEFFSGLEIKTDREGILFVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 219
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S+GI LV +G+ TGEAYV+
Sbjct: 52 VRLRGLPWSATHKEILD--------FLENVNVTNGSSGIHLVTSRVDGKNTGEAYVEVAS 103
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 104 QEDVEEARKLNKASMGHRYI 123
>gi|113951757|ref|NP_001039317.1| G-rich sequence factor 1 [Danio rerio]
gi|112418830|gb|AAI22227.1| Zgc:153305 [Danio rerio]
gi|182890996|gb|AAI64250.1| Zgc:153305 protein [Danio rerio]
Length = 301
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+++ +G+T++ + G+ +G+A+V+F K AE AL+K +E +G+RYI
Sbjct: 149 DIIRFFSGLDVVEDGVTIILN-RRGKSSGDAFVEFATKAMAEKALKKDREILGNRYI 204
>gi|7020094|dbj|BAA90992.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 67 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 117
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 118 HRDLALQRHKHHMGTRYI 135
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 133 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 186
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 187 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 239
>gi|452823782|gb|EME30790.1| RNA-binding protein [Galdieria sulphuraria]
Length = 739
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GKKDDIAQFFDGLEII----SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
D +A+FFDG+EI + GI +V++ +G P GEA+V+F ++ ALQ+HK+ +
Sbjct: 381 ASADQVARFFDGIEIAGCRSNGGIHIVQNQ-DGHPIGEAFVEFASEDALNKALQRHKQMM 439
Query: 92 GHRYI 96
G RYI
Sbjct: 440 GKRYI 444
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+D+ F +G ++I + V + G+P GEA+VQ + + AL+ H++ +GHRY
Sbjct: 266 ATKEDVLNFLEGAQVIPCAVHFVLNQ-QGKPRGEAFVQLLSVDDVNRALELHRQVLGHRY 324
Query: 96 I 96
I
Sbjct: 325 I 325
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKH-KERIGHRYI 96
DI FF I+ GI V + + RP GEA+VQF + AL+K K +G RY+
Sbjct: 510 DITTFFAEYRIVPGGIYFVNNGLD-RPKGEAFVQFSSVDERNDALKKKDKLYMGSRYV 566
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL-QKHKERIGHRYI 96
DI FF I + + L D GRP+GEA+V F +E A A+ Q IG RYI
Sbjct: 658 DIQFFFSDFHITESDVVLGFDKM-GRPSGEAWVTFGTEEEARNAVSQLQHAHIGKRYI 714
>gi|148673703|gb|EDL05650.1| RNA binding motif protein 35A, isoform CRA_b [Mus musculus]
Length = 604
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 399
>gi|348500206|ref|XP_003437664.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oreochromis niloticus]
Length = 741
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+R + + W + DIA+FF GL I G+ L + GR GEA V+F++ E
Sbjct: 226 IRARGLPW--------QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFINSE 276
Query: 79 TAELALQKHKERIGHRYI 96
+LAL++HK +G RYI
Sbjct: 277 HRDLALERHKHHMGSRYI 294
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 36/115 (31%)
Query: 11 DRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS- 52
RYIEV+K +E I G +++AQF GL E+++
Sbjct: 291 SRYIEVYKATGEEF------LKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATPQEVLAF 344
Query: 53 -----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 345 LGPESPVTDGTEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYI 398
>gi|410912184|ref|XP_003969570.1| PREDICTED: epithelial splicing regulatory protein 2-like [Takifugu
rubripes]
Length = 740
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+R + + W + DIA+FF GL I G+ L + GR GEA V+F++ E
Sbjct: 226 IRARGLPW--------QSSDQDIARFFKGLTIAKGGVALCLNA-QGRRNGEALVRFINPE 276
Query: 79 TAELALQKHKERIGHRYI 96
+LAL++HK +G+RYI
Sbjct: 277 HRDLALERHKHHMGNRYI 294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 36/115 (31%)
Query: 11 DRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS- 52
+RYIEV+K +E I G +++ QF GL E++S
Sbjct: 291 NRYIEVYKATGEEF------LKIAGGTSNEVTQFLSKENQVIIRMRGLPFTATPQEVLSF 344
Query: 53 -----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 345 IGPESPVTDGAEGLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYI 398
>gi|327269521|ref|XP_003219542.1| PREDICTED: epithelial splicing regulatory protein 1-like [Anolis
carolinensis]
Length = 648
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 228 QSSDQDVARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 286
Query: 95 YI 96
YI
Sbjct: 287 YI 288
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ +RYIEV+K ++ I G +++AQF GL E++
Sbjct: 283 MGNRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVL 336
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P + RPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 337 TFFGQHCPVTGGKEGILFVTYP-DHRPTGDAFVLFACEEYAQNALKKHKDLLGKRYI 392
>gi|339253436|ref|XP_003371941.1| RNA-binding protein 35B [Trichinella spiralis]
gi|316967724|gb|EFV52114.1| RNA-binding protein 35B [Trichinella spiralis]
Length = 564
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L P GR GEA V+F + E ELAL++H+ +G R
Sbjct: 402 QSSDQDVARFFVGLNIARGGVALCLSP-QGRRNGEALVRFENAEHRELALKRHRHFMGSR 460
Query: 95 YI 96
YI
Sbjct: 461 YI 462
>gi|355686615|gb|AER98118.1| epithelial splicing regulatory protein 1 [Mustela putorius furo]
Length = 561
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 135 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 185
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 186 HRDLALQRHKHHMGTRYI 203
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 39/146 (26%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 201 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 254
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F
Sbjct: 255 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 313
Query: 102 RYTVQHRAPRCETS--IPVSSSTHKP 125
VQ R ++ IP+ + P
Sbjct: 314 AAEVQQVLNRFSSAPLIPLPTPPMIP 339
>gi|296803341|gb|ADH51734.1| ESRP1/RAF1 fusion protein [Homo sapiens]
Length = 1061
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|426236209|ref|XP_004012064.1| PREDICTED: epithelial splicing regulatory protein 1 [Ovis aries]
Length = 761
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 297 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 345
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 346 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYI 379
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 374 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVV 427
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 428 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 483
>gi|351713464|gb|EHB16383.1| Epithelial splicing regulatory protein 1 [Heterocephalus glaber]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 207 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 255
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 256 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 289
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 287 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 340
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 341 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 393
>gi|307110461|gb|EFN58697.1| hypothetical protein CHLNCDRAFT_20050, partial [Chlorella
variabilis]
Length = 81
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 40 DIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ QFF+G+E + G+ P +GRPTGEAYV D E A+ +HK++IG RYI
Sbjct: 14 DVLQFFEGVETVGGEAGVVFTCTP-DGRPTGEAYVALPDAEALAGAVARHKDKIGTRYI 71
>gi|348588462|ref|XP_003479985.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Cavia porcellus]
Length = 681
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|345793292|ref|XP_544182.3| PREDICTED: epithelial splicing regulatory protein 1 [Canis lupus
familiaris]
Length = 764
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 310 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 360
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 361 HRDLALQRHKHHMGTRYI 378
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 376 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 429
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 430 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 482
>gi|34192605|gb|AAH19932.1| ESRP1 protein [Homo sapiens]
Length = 656
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 261 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 309
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 310 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 341 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 394
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 395 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 447
>gi|26334977|dbj|BAC31189.1| unnamed protein product [Mus musculus]
Length = 500
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 199 GTCSKMELID---DSTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 247
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 248 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 279 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 332
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 333 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 385
>gi|405968884|gb|EKC33911.1| Epithelial splicing regulatory protein 2 [Crassostrea gigas]
Length = 727
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C ++ D + VR + + W + DIA+FF GL I G+ L P
Sbjct: 212 GICSKSDIVD---DNHVVRARGLPW--------QSSDQDIARFFKGLNIAKGGVALCLSP 260
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+ +++ +LAL++HK IG RYI
Sbjct: 261 -QGRRNGEALVRLENEQNRDLALKRHKHHIGQRYI 294
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GR TG+A+V +E A AL+KH+E +G RYI
Sbjct: 359 GILFVHYP-DGRSTGDAFVLLASEEDAVSALKKHREIMGTRYI 400
>gi|194214972|ref|XP_001915056.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Equus caballus]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|348588464|ref|XP_003479986.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Cavia porcellus]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|335286314|ref|XP_003355068.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Sus scrofa]
Length = 608
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|85700309|gb|AAI12044.1| ESRP1 protein [Homo sapiens]
Length = 392
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 74 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 124
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 125 HRDLALQRHKHHMGTRYI 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 140 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 193
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 194 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 246
>gi|395818385|ref|XP_003782611.1| PREDICTED: epithelial splicing regulatory protein 1 [Otolemur
garnettii]
Length = 665
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 215 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 265
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 266 HRDLALQRHKHHMGTRYI 283
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 281 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 334
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 335 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 387
>gi|341877456|gb|EGT33391.1| hypothetical protein CAEBREN_08325 [Caenorhabditis brenneri]
Length = 569
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L I+ +GI L+ D RP GEAYV F E+ ++A Q+H + IGHRYI
Sbjct: 128 DINDFFAPLPIVRDGI-LLPDQQQARPGGEAYVCFESMESMQIAKQRHMKNIGHRYI 183
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF I N + L+ D RP+G+A V F +++ + AL K K+ +G RYI
Sbjct: 506 DVYDFF--HPIRPNQVELIRDYQFQRPSGDARVIFFNRKDYDDALMKDKQYMGERYI 560
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E ++D+ FF I S I NGR G+A V F +++ AL+K +E +G R
Sbjct: 15 EATEEDLRDFFGNTGIESLDIPKR----NGRTCGDATVTFTNEDDYNRALKKDREHLGSR 70
Query: 95 YI 96
YI
Sbjct: 71 YI 72
>gi|335286312|ref|XP_003125612.2| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Sus scrofa]
Length = 681
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|417412339|gb|JAA52559.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 697
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 233 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 281
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 282 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 315
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 313 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 366
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 367 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 419
>gi|426360259|ref|XP_004047365.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|426360257|ref|XP_004047364.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|344273261|ref|XP_003408442.1| PREDICTED: epithelial splicing regulatory protein 1 [Loxodonta
africana]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|296226947|ref|XP_002807679.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1 [Callithrix jacchus]
Length = 676
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|281352677|gb|EFB28261.1| hypothetical protein PANDA_016305 [Ailuropoda melanoleuca]
Length = 656
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|170763529|ref|NP_001116298.1| epithelial splicing regulatory protein 1 isoform 3 [Homo sapiens]
gi|114620965|ref|XP_001143826.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1 [Pan
troglodytes]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|431917858|gb|ELK17089.1| Epithelial splicing regulatory protein 1 [Pteropus alecto]
Length = 680
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 180 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 228
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 229 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 262
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 260 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 313
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 314 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 366
>gi|127799644|gb|AAH99916.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|56790297|ref|NP_060167.2| epithelial splicing regulatory protein 1 isoform 1 [Homo sapiens]
gi|124020999|sp|Q6NXG1.2|ESRP1_HUMAN RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|119612127|gb|EAW91721.1| RNA binding motif protein 35A, isoform CRA_b [Homo sapiens]
gi|127799385|gb|AAH67098.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 681
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|403295784|ref|XP_003938806.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 676
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|297683323|ref|XP_002819332.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Pongo abelii]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|402878741|ref|XP_003903031.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Papio anubis]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|355698103|gb|EHH28651.1| RNA-binding protein 35A [Macaca mulatta]
gi|355779831|gb|EHH64307.1| RNA-binding protein 35A [Macaca fascicularis]
Length = 681
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|338728566|ref|XP_003365697.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Equus caballus]
Length = 659
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|297299790|ref|XP_002808532.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1-like [Macaca mulatta]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|403295786|ref|XP_003938807.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 603
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|170763525|ref|NP_001030087.2| epithelial splicing regulatory protein 1 isoform 2 [Homo sapiens]
gi|332830836|ref|XP_003311899.1| PREDICTED: epithelial splicing regulatory protein 1 [Pan
troglodytes]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|170763527|ref|NP_001116297.1| epithelial splicing regulatory protein 1 isoform 4 [Homo sapiens]
Length = 608
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|402878739|ref|XP_003903030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Papio anubis]
Length = 677
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|395739900|ref|XP_003777336.1| PREDICTED: epithelial splicing regulatory protein 1 [Pongo abelii]
Length = 677
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|338728568|ref|XP_003365698.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Equus caballus]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|426360261|ref|XP_004047366.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|410987481|ref|XP_004000029.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Felis catus]
Length = 659
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|170763533|ref|NP_001116299.1| epithelial splicing regulatory protein 1 isoform 5 [Homo sapiens]
gi|114620967|ref|XP_001143905.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2 [Pan
troglodytes]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|341879523|gb|EGT35458.1| CBN-HRPF-1 protein [Caenorhabditis brenneri]
Length = 569
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF L I+ +GI L+ D RP GEAYV F E+ ++A Q+H + IGHRYI
Sbjct: 128 DINDFFAPLPIVRDGI-LLPDQQRARPGGEAYVCFESMESMQIAKQRHMKNIGHRYI 183
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF I N + L+ D RP+G+A V F +++ + AL K K+ +G RYI
Sbjct: 506 DVYDFF--HPIRPNQVELIRDYQFQRPSGDARVIFFNRKDYDDALMKDKQYMGERYI 560
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E ++D+ FF I S I NGR G+A V F +++ AL+K +E +G R
Sbjct: 15 EATEEDLRDFFGNTGIESLDIPKR----NGRTCGDATVTFTNEDDYNRALKKDREHLGSR 70
Query: 95 YI 96
YI
Sbjct: 71 YI 72
>gi|297683325|ref|XP_002819333.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Pongo abelii]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|410987479|ref|XP_004000028.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Felis catus]
Length = 677
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|301782433|ref|XP_002926629.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Ailuropoda melanoleuca]
Length = 677
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|410987483|ref|XP_004000030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Felis catus]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|402878743|ref|XP_003903032.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Papio anubis]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|170035383|ref|XP_001845549.1| G-rich sequence factor-1 [Culex quinquefasciatus]
gi|167877365|gb|EDS40748.1| G-rich sequence factor-1 [Culex quinquefasciatus]
Length = 508
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQH-TGIVEG-------------KKDDIAQFFDGLEIIS-- 52
+ RYIEVF + + + G +G K+DI +FF GL I +
Sbjct: 81 IGHRYIEVFTANEDQYEQAVNDGEGDEDGGPVLKLRGLPWSCTKEDIKRFFVGLTIKNGI 140
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
NGI L+ D GR +GEA V+F + AE A+ K KE+IG RYI
Sbjct: 141 NGILLLTDQL-GRASGEAIVEFATEADAEQAMNKQKEKIGSRYI 183
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI FF L + I E GRP+GE F E A A++KHKE++G RYI F
Sbjct: 439 DIQDFFMPLRPVKANI---EYDSRGRPSGEGNAYFETVEEAMKAMKKHKEKMGSRYIELF 495
Query: 99 TGHR 102
G R
Sbjct: 496 AGAR 499
>gi|149061069|gb|EDM11679.1| similar to hypothetical protein FLJ20171 (predicted) [Rattus
norvegicus]
Length = 604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 39/146 (26%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 405
Query: 102 RYTVQHRAPRCETS--IPVSSSTHKP 125
VQ R ++ IP+ ++ P
Sbjct: 406 AAEVQQVLNRFSSAPLIPLPTAPIIP 431
>gi|229485495|sp|B2RYD2.2|ESRP1_RAT RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 677
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G L + GR GEA V+FV +E
Sbjct: 227 VRARGLPW--------QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGTRYI 295
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 39/146 (26%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EIIS-- 52
RYIEV+K ++ I G +++AQF GL E+++
Sbjct: 293 RYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF 346
Query: 53 ----------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F
Sbjct: 347 GQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 405
Query: 102 RYTVQHRAPRCETS--IPVSSSTHKP 125
VQ R ++ IP+ ++ P
Sbjct: 406 AAEVQQVLNRFSSAPLIPLPTAPIIP 431
>gi|195488502|ref|XP_002092343.1| GE14142 [Drosophila yakuba]
gi|194178444|gb|EDW92055.1| GE14142 [Drosophila yakuba]
Length = 889
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++F +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFECQEHRDMALKRHKHHIGSR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F + A AL +H+E IG RYI
Sbjct: 414 NEGVLFVKKP-DGRATGDAFVLFAHESDASKALCRHRESIGQRYI 457
>gi|358253640|dbj|GAA53549.1| epithelial splicing regulatory protein 1 [Clonorchis sinensis]
Length = 1176
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 38 KDDIAQFFDGLE----IISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
K I FF +E + +NGI LV P GRPTG+A+V F D +TA AL +HK+ +G
Sbjct: 525 KQQILDFFKAVEAPVLLEANGIYLVAYP-EGRPTGDAFVLFSDDKTATRALLRHKDYLGD 583
Query: 94 RYI 96
RY+
Sbjct: 584 RYV 586
>gi|25144421|ref|NP_740878.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
gi|351061233|emb|CCD68996.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
Length = 362
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--F 97
DI+ F L I+ +GI L+ D RP GEAYV F E+ ++A Q+H + IGHRYI F
Sbjct: 138 DISDFLAPLPIVRDGI-LLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVF 196
Query: 98 FTGHR 102
HR
Sbjct: 197 EATHR 201
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 26 WKLQHTGIV-EGKKDDIAQFFDGLEIISNGITLVEDPF-NGRPTGEAYVQFVDKETAELA 83
+++Q G+ E + ++ FF +NGI +E P NGR +G+A V F ++E A
Sbjct: 5 YEVQCRGLPWEATEQELRDFFG-----NNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNA 59
Query: 84 LQKHKERIGHRYI 96
L+K +E +G RYI
Sbjct: 60 LKKDREHLGSRYI 72
>gi|440793766|gb|ELR14941.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 622
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNG------ITLVEDPFNGRPTGEA 70
F VR + + W + +DDI FF GL +G I L P +GRPTGE
Sbjct: 7 FVVRLRGLPW--------QATEDDIKNFFQGLTFAPDGKDGLPSILLALSP-SGRPTGEG 57
Query: 71 YVQFVDKETAELALQKHKERIGHRYI 96
Y F ++ET AL K KER+G RYI
Sbjct: 58 YAHFDNEETFVKALAKDKERMGQRYI 83
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 30/117 (25%)
Query: 9 VSDRYIEVFKVRRQEMD-WKLQHTGIVEG------KKDD--------------------I 41
+ RYIEVF + +M+ ++ G+ EG +DD I
Sbjct: 78 MGQRYIEVFACPQSDMEKAQMLARGVTEGASAAATNEDDLQCAAVVRMRGLPFRATEGEI 137
Query: 42 AQFFD--GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
FF+ G+ ++ G+ + ++P +GR TGEAYVQF E A AL++H++++G RYI
Sbjct: 138 VAFFEQAGVRVLDGGVLICKNP-DGRVTGEAYVQFGSDEDARRALERHRDQMGSRYI 193
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 16/76 (21%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPRCETSIPVSSS 121
+GRP+G+A+ +F ++ E A+ K+++ +G RY+ F R+ + +SS
Sbjct: 297 SGRPSGDAFAEFDNEAQWEHAMSKNRQHMGSRYVEIFGSSRHEL------------MSSL 344
Query: 122 TH--KPGR-HHTLDGP 134
+H P R HH GP
Sbjct: 345 SHGEPPSRYHHQHQGP 360
>gi|24646105|ref|NP_650120.1| glorund, isoform A [Drosophila melanogaster]
gi|24646107|ref|NP_731639.1| glorund, isoform B [Drosophila melanogaster]
gi|7299517|gb|AAF54704.1| glorund, isoform A [Drosophila melanogaster]
gi|7299518|gb|AAF54705.1| glorund, isoform B [Drosophila melanogaster]
gi|19528177|gb|AAL90203.1| AT27789p [Drosophila melanogaster]
Length = 586
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 41 IAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF GL+I ++ GI V D GR TGEA+VQF ++ E AL +++E+IGHRYI
Sbjct: 162 IEEFFSGLDIKTDREGILFVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 218
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 51 VRLRGLPWSATHKEILD--------FLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 103 QEDVEEARKLNKASMGHRYI 122
>gi|324510500|gb|ADY44391.1| RNA-binding protein sym-2, partial [Ascaris suum]
Length = 603
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 41 IAQFF----DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF +G ++ GI V +GRPTG+A+V F D+ +LAL KHK IG RYI
Sbjct: 288 IREFFASGDNGCTVMEGGILFVNKS-DGRPTGDAFVMFDDEAAGQLALTKHKHTIGSRYI 346
Query: 97 -FFTGHRYTVQHRAPRCETSIPV 118
F + VQ R S+ V
Sbjct: 347 ELFRSTQAEVQQVVNRSLESVQV 369
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 5 RTGEVSDRYIEVFKVR-RQEMDWKLQH--TGIV--------EGKKDDIAQFFDGLEIISN 53
R GE + R +E+ + R + WK + +V + D+AQFF GL I
Sbjct: 140 RDGENAFRNVELVRTELRNAICWKESEVDSAVVVRARGLPWQATDHDVAQFFVGLNIAPG 199
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ L GR GEA V+F + E ELAL++H+ + +RYI
Sbjct: 200 GVALCLSA-EGRRNGEALVRFEESEQRELALKRHRHFLHNRYI 241
>gi|449280564|gb|EMC87832.1| G-rich sequence factor 1, partial [Columba livia]
Length = 331
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 23/117 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQ---------HTGIV-------EGKKDDIAQFFDGLEIISNGI 55
RY++VF+V +++ L+ + G+V +DDIA FF GL+I I
Sbjct: 78 RYVKVFEVHDSDVESLLRSLRDESQAINDGVVMLRGLPFSSTEDDIADFFSGLKI--TDI 135
Query: 56 TLVEDPFNG-RPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
V + G R TGEA+VQF + A AL +H+E +G+RYI + ++ +Q P
Sbjct: 136 AFV---YRGERRTGEAFVQFAAPDMAAKALSRHREYMGNRYIEVYVSRKHQMQRHVP 189
>gi|198421641|ref|XP_002120551.1| PREDICTED: similar to RNA-binding protein 35B (RNA-binding motif
protein 35B) [Ciona intestinalis]
Length = 772
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 2 GHCRTGE-VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVED 60
G C T E ++D + VR + + W + D+A+FF GL I G LV +
Sbjct: 241 GPCMTSELINDNTV----VRARGLPW--------QASDHDVARFFKGLNIPRGGAALVLN 288
Query: 61 PFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
P GR GEA V+F +++ +LAL +HK + RYI
Sbjct: 289 P-QGRRNGEALVRFENEQQRDLALLRHKHHMASRYI 323
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 40 DIAQFF-DGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF D + + G+ LV+ +GRPTG+A+V F ++ A AL KHK +G RY+
Sbjct: 369 DIVEFFGDEIPVAHGEEGVLLVKFA-DGRPTGDAFVLFTSEKFAVAALNKHKLTLGKRYV 427
Query: 97 -FFTGHRYTVQHRAPRCETS--IPVSSSTH 123
F VQ R TS IP S H
Sbjct: 428 EIFKSTAAEVQQVLSRHMTSPIIPTMPSPH 457
>gi|449499514|ref|XP_002192774.2| PREDICTED: G-rich sequence factor 1 [Taeniopygia guttata]
Length = 402
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 21/116 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHT---------GIV-------EGKKDDIAQFFDGLEIISNGI 55
RY++VF+V +++ LQ G+V ++DIA FF GL+I
Sbjct: 148 RYVKVFEVHDSDVEGLLQSLRDESQAMSDGVVLLRGLPFTSTEEDIADFFSGLKITDIAF 207
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
D R TGEA+VQF E A AL +H+E +G RYI + ++ +Q P
Sbjct: 208 IYRGD----RRTGEAFVQFATPEMAAKALLRHREYMGSRYIEVYVSRKHQMQRHMP 259
>gi|242017929|ref|XP_002429436.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514368|gb|EEB16698.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 766
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL I G+ L P GR GEA V+FV++
Sbjct: 196 VRARGLPW--------QSSDGDIARFFRGLNIEKGGVALCLSP-AGRRNGEALVRFVNQA 246
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK +G RYI
Sbjct: 247 HRDMALKRHKHHMGQRYI 264
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+++ + DG +G+ V+ +GR TG+A+V F ++ A AL KH+ERIG RYI
Sbjct: 319 ENNTCEVLDG----EDGVLFVKKS-DGRATGDAFVLFSNESDAPKALSKHRERIGSRYIE 373
Query: 98 F----TGHRYTVQHRAPRCETSIPV 118
T V +RA +PV
Sbjct: 374 LFRSTTAEVQQVLNRAQEDPKPVPV 398
>gi|157111781|ref|XP_001651725.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878303|gb|EAT42528.1| AAEL005947-PB [Aedes aegypti]
Length = 491
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEG--------------KKDDIAQFFDGLEIIS--NGI 55
RYIEVF + D + E +D+ +FF GL I + NGI
Sbjct: 89 RYIEVFTASDDQFDKAVNREESAEDGGPVLRMRGLPWSCTTEDVKRFFSGLTIKNGYNGI 148
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR +GEA V+F A+ A+ K KE+IG+RYI
Sbjct: 149 VLLLDQL-GRASGEAIVEFATDAEADQAMSKQKEKIGNRYI 188
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+ DI FF L + ++ GRP+GE F E A A++KHKE++G RYI
Sbjct: 421 EQDIYDFFMPLRPVKCNVSFDS---RGRPSGEGDAYFDTMEEAMKAMKKHKEKMGSRYIE 477
Query: 97 FFTGHR 102
F G R
Sbjct: 478 LFAGSR 483
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F +R + + W I EG DI F G+EI + + + + R TGEAY++
Sbjct: 22 FFIRLRGLPWN-----ITEG---DIRDFLSGVEI--DQVHICINQMTKRQTGEAYLRMPT 71
Query: 77 KETAELALQKHKERIGHRYI 96
E AL ++K +GHRYI
Sbjct: 72 LEDQIKALDQNKATLGHRYI 91
>gi|345495521|ref|XP_001604031.2| PREDICTED: RNA-binding protein fusilli-like [Nasonia vitripennis]
Length = 817
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL + G+ L GR GEA V+FV KE ++AL++HK I R
Sbjct: 260 QSSDQDVAKFFRGLNVAKGGVALCLSA-QGRRNGEALVRFVSKEHRDMALKRHKHHIDQR 318
Query: 95 YI 96
YI
Sbjct: 319 YI 320
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 43 QFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
Q DG +G+ V+ +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 379 QVLDG----EDGVLFVKKA-DGRATGDAFVLFAQEEDAAKALSKHRDCIGSRYI 427
>gi|442746051|gb|JAA65185.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 141
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 17/66 (25%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEII 51
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF GLEI+
Sbjct: 75 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGLEIV 134
Query: 52 SNGITL 57
NGITL
Sbjct: 135 PNGITL 140
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 38 KDDIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K++I FF E+ I GI+ V + GRP+GEAY++ ++ E+ LQ+H E IGHR
Sbjct: 19 KEEILNFFTSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIGHR 78
Query: 95 YI 96
YI
Sbjct: 79 YI 80
>gi|359063387|ref|XP_002685850.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 1157
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA+FF GL I G L + G+ GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 240 DIARFFKGLNIAKGGAALCLNA-QGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYI 295
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVV 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|157111783|ref|XP_001651726.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878304|gb|EAT42529.1| AAEL005947-PA [Aedes aegypti]
Length = 471
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEG--------------KKDDIAQFFDGLEIIS--NGI 55
RYIEVF + D + E +D+ +FF GL I + NGI
Sbjct: 89 RYIEVFTASDDQFDKAVNREESAEDGGPVLRMRGLPWSCTTEDVKRFFSGLTIKNGYNGI 148
Query: 56 TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+ D GR +GEA V+F A+ A+ K KE+IG+RYI
Sbjct: 149 VLLLDQL-GRASGEAIVEFATDAEADQAMSKQKEKIGNRYI 188
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+ DI FF L + ++ GRP+GE F E A A++KHKE++G RYI
Sbjct: 401 EQDIYDFFMPLRPVKCNVSFDS---RGRPSGEGDAYFDTMEEAMKAMKKHKEKMGSRYIE 457
Query: 97 FFTGHR 102
F G R
Sbjct: 458 LFAGSR 463
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F +R + + W I EG DI F G+EI + + + + R TGEAY++
Sbjct: 22 FFIRLRGLPWN-----ITEG---DIRDFLSGVEI--DQVHICINQMTKRQTGEAYLRMPT 71
Query: 77 KETAELALQKHKERIGHRYI 96
E AL ++K +GHRYI
Sbjct: 72 LEDQIKALDQNKATLGHRYI 91
>gi|297746312|emb|CBI16368.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 12 RYIEVFKVRRQEMDWKLQHT------GIV-------EGKKDDIAQFFDGLEIISNGITLV 58
RY+EVF+ +RQE + + G++ K+DI FF + + I +
Sbjct: 121 RYVEVFRSKRQEYYKAIANEVSDTRGGVLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMT 180
Query: 59 EDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GRPTGEA+V+F + E ++ A+ K + +G RYI
Sbjct: 181 VNS-EGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYI 217
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF L+I+ + V NGR TGEA+ E ALQ++++ +G RY+
Sbjct: 71 DVAEFFHSLDIVD--VLFVHK--NGRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYV 123
>gi|302839324|ref|XP_002951219.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
gi|300263548|gb|EFJ47748.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
Length = 245
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI QFF E+ G++ V +P +GRP+G A+ +FV KE A AL K+ E IG RY+
Sbjct: 55 ENDIRQFFAPYEL--KGVSFVYEP-DGRPSGLAFAEFVSKEEALKALSKNGEYIGQRYV 110
>gi|302850710|ref|XP_002956881.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
gi|300257762|gb|EFJ42006.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
Length = 628
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+G K+DI +FF G + + + L + P +GRP GEA+V F D + A A QK +E G +
Sbjct: 38 KGGKEDIIKFFAGFTVRPDQVFLRKHP-DGRPNGEAFVVFEDSDEARRATQKDRETFGEK 96
Query: 95 YIFFTGHRYTVQHRAPRCETSIP 117
+ G RY + P ++ IP
Sbjct: 97 F----GDRYVRVY--PTLDSDIP 113
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 11 DRYIEVFKVRRQEM----------DWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVE 59
DRY+ + +V R+EM + L+ GI + D+ +FF G ++ + G++ +
Sbjct: 214 DRYVRLIQVSRKEMQATLALRFGGEGVLKMKGIPFKATAVDVRKFFTGYKVKTEGVSFIM 273
Query: 60 DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+GRPTG A+++F + A A++K + + G Y
Sbjct: 274 HA-DGRPTGMAFIEFETPQEAVRAMEKDRAKFGPEY 308
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK--HK---ERIGHR 94
DI QFF+ ++ NG+ LV N +PTGEA+V F E A ++++ HK E+ G R
Sbjct: 157 DIIQFFENFKLKPNGVQLVVRSDN-KPTGEAFVDFETPEEAARSIKEKDHKVFSEKFGDR 215
Query: 95 YI 96
Y+
Sbjct: 216 YV 217
>gi|358420736|ref|XP_001789374.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
gi|296490145|tpg|DAA32258.1| TPA: fusilli-like [Bos taurus]
Length = 767
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C E+ D + VR + + W + DIA+FF GL I G L +
Sbjct: 213 GTCSKMELID---DNTVVRARGLPW--------QSLDQDIARFFKGLNIAKGGAALCLNA 261
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ GEA V+FV +E +LALQ+HK +G RYI
Sbjct: 262 -QGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYI 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GL-------EII 51
+ RYIEV+K ++ I G +++AQF GL E++
Sbjct: 290 MGSRYIEVYKATGEDF------LKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVV 343
Query: 52 S------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 344 AFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
>gi|326918872|ref|XP_003205709.1| PREDICTED: g-rich sequence factor 1-like, partial [Meleagris
gallopavo]
Length = 343
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT---------GIV-------EGKKDDIAQFFDGLEIISNGI 55
RY++V ++ +++D LQ G+V + +DDIA FF GL I I
Sbjct: 93 RYVKVHEIHDKDVDGLLQSLRYESQVMSDGVVLLRGLPFDSTEDDIADFFAGLRI--TDI 150
Query: 56 TLVEDPFNG-RPTGEAYVQFVDKETAELALQKHKERIGHRYI--FFTGHRYTVQHRAPRC 112
T V + G R TGEAYVQF E AL +HKE + +RYI + + R +H + R
Sbjct: 151 TFV---YRGERKTGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRK 207
Query: 113 E 113
E
Sbjct: 208 E 208
>gi|159468195|ref|XP_001692268.1| hypothetical protein CHLREDRAFT_189395 [Chlamydomonas reinhardtii]
gi|158278454|gb|EDP04218.1| predicted protein [Chlamydomonas reinhardtii]
Length = 913
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 30 HTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKE 89
H +VE DDI QFF ++ GI+ V +P +GRP+G A+ +FV KE A AL K+ E
Sbjct: 626 HRSLVE---DDIRQFFAPYDL--KGISFVYEP-DGRPSGLAFAEFVSKEEALKALSKNGE 679
Query: 90 RIGHRYI 96
IG RY+
Sbjct: 680 YIGQRYV 686
>gi|118362902|ref|XP_001014867.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila]
gi|89296443|gb|EAR94431.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila
SB210]
Length = 967
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FF 98
DI +FF +I+ NGI V D RP+GEA++ F K+ A+ A++K KE++G RYI F
Sbjct: 483 DIQKFFKDSQIVQNGIQKVYD--GKRPSGEAFIIFATKQDAQKAIEKDKEKMGSRYIEIF 540
Query: 99 TGH 101
H
Sbjct: 541 LSH 543
>gi|270009942|gb|EFA06390.1| hypothetical protein TcasGA2_TC009268 [Tribolium castaneum]
Length = 751
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L GR GEA ++F +E ++AL++HK IG R
Sbjct: 236 QSSDQDIAKFFSGLNVAKGGVALCLSA-QGRRNGEALIKFESQEHRDMALKRHKHHIGPR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DG E G+ V P +GR TG+A+V F + A AL KH+E IG RYI
Sbjct: 357 LDGTE----GVLFVRKP-DGRATGDAFVLFASESDAPKALSKHRECIGSRYI 403
>gi|449016117|dbj|BAM79519.1| similar to heterogeneous nuclear ribonucleoprotein H3, isoform a
[Cyanidioschyzon merolae strain 10D]
Length = 642
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 48 LEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--FFTGHR 102
L+++ GI V + GR TGE +VQF E A L KH++R+GHRYI F + H+
Sbjct: 356 LQVLPGGIVFVYN-HQGRKTGEVFVQFASPEDASRCLHKHEDRMGHRYIEVFLSSHQ 411
>gi|427788569|gb|JAA59736.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1004
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+ D+ QFF GL ++ LVE +GR TG A+V+F DK E A+ + +IGHRYI
Sbjct: 539 EQDVLQFFSGLNVLD---ILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRRKIGHRYIE 595
Query: 98 FT-GHR---YTVQHRAPRCETSIPVSSSTHKPGRHHTLDGPNGG 137
+ G R Y ++ +PV +P H + GP+ G
Sbjct: 596 LSVGSRDAMYAARNGDNIRPDGMPVGRRDEEPPVGHGV-GPDRG 638
>gi|395530818|ref|XP_003767484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Sarcophilus harrisii]
Length = 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER 90
K+ I FF LE++ +GI L D F G+ TG A VQF +E AE+A++KHK R
Sbjct: 32 KETIRHFFSELEMVPSGIILPMD-FQGKSTGTALVQFASQEAAEIAIRKHKGR 83
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DI FF L + I + +D G+ TGEA V FV E A A+ K K + HRYI
Sbjct: 203 NDIYHFFSPLCPLRVHIEIGQD---GKATGEADVDFVTHEDAVAAMAKEKTYMQHRYI 257
>gi|427788565|gb|JAA59734.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1011
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+ D+ QFF GL ++ LVE +GR TG A+V+F DK E A+ + +IGHRYI
Sbjct: 539 EQDVLQFFSGLNVLD---ILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRRKIGHRYIE 595
Query: 98 FT-GHR---YTVQHRAPRCETSIPVSSSTHKPGRHHTLDGPNGG 137
+ G R Y ++ +PV +P H + GP+ G
Sbjct: 596 LSVGSRDAMYAARNGDNIRPDGMPVGRRDEEPPVGHGV-GPDRG 638
>gi|296088657|emb|CBI37648.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 19/103 (18%)
Query: 12 RYIEVFKVRRQEM-----------DWKLQHTGIVE-------GKKDDIAQFFDGLEIISN 53
RY+EVF+ ++Q+ +++HT I++ KK I +FF E+ +
Sbjct: 123 RYVEVFRCKKQDYYHAVASERFSDKDQMEHTEILKLRGLPFSVKKSQILEFFGDFELGDD 182
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ + P +G+ TGEAYV+F E A+ A+ K K IG RY+
Sbjct: 183 KVHIACRP-DGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYV 224
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV +GR +GEAYV F A+ ALQ+ ++ +G RY+
Sbjct: 73 DIFKFFAGLDIVD--VLLVNK--SGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 125
>gi|241999526|ref|XP_002434406.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497736|gb|EEC07230.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 1026
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFT 99
D+ QFF GL I+ VE NGR TG +V+F K + A+ H+ ++GHRYI T
Sbjct: 648 DVLQFFSGLNILD---LFVEHDHNGRATGTGFVEFASKRDFDAAMNMHRRKMGHRYIELT 704
>gi|82621148|gb|ABB86262.1| unknown [Solanum tuberosum]
Length = 364
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVE-----------------------GKKDDIAQFF 45
+ +RYIE+F +E++ + ++E KDDI FF
Sbjct: 237 IGNRYIELFASSSEELEEAVSRGRVLEKPVDGRDPNEVTSILRMRGLPFSAGKDDIMDFF 296
Query: 46 DGLEIISNGI--TLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ + I T + D GRPTGEA+V+F + A+ AL K + +G RY+
Sbjct: 297 KDFALTEDAIHVTFLSD---GRPTGEAFVEFASTDDAKAALAKDRMTLGSRYV 346
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 33/117 (28%)
Query: 12 RYIEVFKVRRQEMDWKL-------------------------QHTGIV-------EGKKD 39
RY+EVF+ +++E + +HTG++ K+
Sbjct: 127 RYVEVFRSKKEEYYKAIANEVYDSRGGSVPRARSADESKTLPEHTGVLWLRGLPFSASKE 186
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF E+ I + F GRPTGEA+V+F + + A+ K + IG+RYI
Sbjct: 187 DIIDFFKDFELPEKSIHITAT-FEGRPTGEAFVEFASADDSRAAMAKDRMTIGNRYI 242
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+IA F GL+++ + LV GR TGEAY + ALQ++++ IG RY+
Sbjct: 77 EIADFLHGLDVVD--VLLVHK--GGRFTGEAYCVLGYPLQVDFALQRNRQNIGRRYV 129
>gi|345308102|ref|XP_001505380.2| PREDICTED: epithelial splicing regulatory protein 2-like
[Ornithorhynchus anatinus]
Length = 729
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
IA+FF GL I G+ L + GR GEA V+FV+ + +LAL++HK +G RYI
Sbjct: 262 IARFFIGLNIAKGGVALCLNA-QGRRNGEALVRFVNSDHRDLALERHKHHMGSRYI 316
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 36/117 (30%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN----- 53
+ RYIEV+K E I G +++AQF GL +
Sbjct: 311 MGSRYIEVYKATGDEF------LKIAGGTSNEVAQFLSRENQVIIRLRGLPFSATPDDVL 364
Query: 54 --------------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V P +GRPTG+A+ F ++ A+ AL++HK +G RYI
Sbjct: 365 GFLGPECPVTGGPEGLLFVRYP-DGRPTGDAFALFACEDAAQSALRRHKGILGKRYI 420
>gi|308498127|ref|XP_003111250.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
gi|308240798|gb|EFO84750.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
Length = 558
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--F 97
DI F L I+ +GI L+ D RP+GEAY+ F E+ ++A Q+H + IGHRYI F
Sbjct: 134 DINDFLQPLGIVRDGI-LLPDQQRARPSGEAYIVFDMLESVQIAKQRHMKNIGHRYIEVF 192
Query: 98 FTGHR 102
HR
Sbjct: 193 EATHR 197
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 14/83 (16%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP-FNGRPTGEAYVQ 73
E F+V+ + + W E ++D+ FF G NGI V+ P NGR +G+A V
Sbjct: 3 ETFQVQCRGLPW--------EATEEDLRGFFGG-----NGIESVDIPKRNGRTSGDATVT 49
Query: 74 FVDKETAELALQKHKERIGHRYI 96
F +++ +LAL+K +E +G RYI
Sbjct: 50 FSNEDDYKLALKKDREHLGSRYI 72
>gi|242017923|ref|XP_002429433.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514365|gb|EEB16695.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 498
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
FDG NGI V+ P +GR TG+A+VQF+ + A AL KHKE IG RYI
Sbjct: 70 FDG----ENGILFVKKP-DGRSTGDAFVQFIHESEAIAALSKHKELIGTRYI 116
>gi|224104153|ref|XP_002313339.1| predicted protein [Populus trichocarpa]
gi|222849747|gb|EEE87294.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 36/120 (30%)
Query: 12 RYIEVFKVRRQEMDWKL----------------------------QHTGIV-------EG 36
RY+EVF+ +RQ+ + +HTG++
Sbjct: 117 RYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEHTGVLRLRGLPFSA 176
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KDDI +FF + + I + + GRPTGEA+V+F + E ++ A+ K + +G RYI
Sbjct: 177 SKDDIMEFFKDFVLSEDSIHITMNS-EGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYI 235
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF GL+I+ + V G+ +GEA+ + ALQK+++ +G RY+
Sbjct: 67 DVAEFFHGLDIVD--VLFVHK--GGKFSGEAFCVLGYPLQVDFALQKNRQNMGRRYV 119
>gi|90018164|gb|ABD83895.1| hypothetical protein [Ictalurus punctatus]
Length = 157
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 17/66 (25%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI----VEG-------------KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG EG K++I +FF GLEI+ NG
Sbjct: 77 RYVEVFKSNNVEMDWVLKHTGPNGPETEGDGLVRLRGLPFGCSKEEIVRFFSGLEIVPNG 136
Query: 55 ITLVED 60
ITL D
Sbjct: 137 ITLPVD 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQ 73
E F VR + + W D++A+FF ++ +NG ++ + GRP+GEA+V+
Sbjct: 5 EGFVVRVRGLPWSCS--------VDEVARFFSDCKVANNGTSIHLTYTREGRPSGEAFVE 56
Query: 74 FVDKETAELALQKHKERIGHRYI 96
++ ++AL+K +E +GHRY+
Sbjct: 57 LESEDELKIALKKDRETMGHRYV 79
>gi|449448717|ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
gi|449502606|ref|XP_004161690.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Cucumis sativus]
Length = 260
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 23 EMDWKLQHTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
E+ +HTG++ KDDI FF G + + I L + GRP+GEA+V+F
Sbjct: 163 EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNS-EGRPSGEAFVEFS 221
Query: 76 DKETAELALQKHKERIGHRYI 96
+++ ++ A+ K + +G RYI
Sbjct: 222 NEQDSKAAMSKDRMTLGSRYI 242
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL+I+ I V NG+ TGE + + ALQ++++ +G RY+
Sbjct: 73 DVVEFFHGLDIVD--ILFVHK--NGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYV 125
>gi|443682871|gb|ELT87306.1| hypothetical protein CAPTEDRAFT_189098 [Capitella teleta]
Length = 639
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 20/95 (21%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G CR E D E +R + + W + DIA+FF GL I +
Sbjct: 169 GICRKDEAVD---EECVIRARGLPW--------QSSDQDIARFFQGLNIANQ-------- 209
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F KE +LAL+KHK +G RYI
Sbjct: 210 -QGRRNGEALIRFESKEHRDLALRKHKHHLGQRYI 243
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQH--------RAPRCE 113
+GR TG+A+V F + + A AL KH+E IG RYI F VQ R P E
Sbjct: 321 DGRATGDAFVLFANDDDATRALSKHRESIGTRYIELFKSTTAEVQQVLNRSMDPRTPSTE 380
Query: 114 T 114
T
Sbjct: 381 T 381
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL-QKHKERIGHRYI 96
DI FF+G+ + + V+ +GR TGEAY+ F + AE A+ +++++ IG+R++
Sbjct: 578 DILAFFEGIYEMQPDVQ-VQRGSDGRLTGEAYITFGSRSEAERAITERNRKVIGNRFV 634
>gi|340380887|ref|XP_003388953.1| PREDICTED: RNA-binding protein 12B-like [Amphimedon queenslandica]
Length = 746
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT----------------GIVEGK-KDDIAQFFDGLEIISNG 54
RYIEVF+ + + +++ G+ G +D+I FF G+ I
Sbjct: 204 RYIEVFRASQNQFEYECHPMKGPGVGGRAGGVVRLRGLPYGSTEDNIRDFFQGIAISHIT 263
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ L E +GR TGEA+V+ +E + AL +HK+ +GHRYI
Sbjct: 264 MQLNE---SGRETGEAFVELFHEEDVDRALDRHKKVLGHRYI 302
>gi|156401541|ref|XP_001639349.1| predicted protein [Nematostella vectensis]
gi|156226477|gb|EDO47286.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 4 CRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN 63
C G V D + +R + + W + D+A FF GL I GI +
Sbjct: 2 CSLGPVLDDTV----LRARGLPW--------QASDQDVANFFRGLNIPRGGIAFCLN-MQ 48
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA+++F + + +LAL++HK +G RYI
Sbjct: 49 GRRNGEAFIRFENGDHRDLALRRHKMHLGTRYI 81
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEG-------------------KKDDIAQFF-DGLEII 51
RYIEV+K Q+ ++ I K D+ +FF D + +
Sbjct: 79 RYIEVYKASAQDFLRIVRGMSIAANFVSTNAEVIIRMRGLPFSTKAADVVRFFGDDVPVY 138
Query: 52 --SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQH 107
GI +V NG+ TG+A+V F +E AL+KH+E +G RY+ F + VQ
Sbjct: 139 RGEGGILMVRGR-NGKATGDAFVLFETEEHGRAALKKHREVLGSRYVELFRSSQSEVQQ 196
>gi|298713992|emb|CBJ27224.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 525
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K ++ FF G I G+ V +GR TGEAYV+F +E A++ L+K +E IG RYI
Sbjct: 450 KSEVMCFFKGCSIPEEGVAFVTRA-DGRVTGEAYVRFATREDAKMGLRKDREMIGSRYI 507
>gi|356527218|ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
max]
Length = 260
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 37/121 (30%)
Query: 12 RYIEVFKVRRQEMDWKL-----------------------------QHTGIV-------E 35
RY+EVF+ +RQE + +HTG++
Sbjct: 123 RYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGLPFS 182
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
KDDI +FF + + I ++ + GRP+GEAY +F E ++ A+ K + +G RY
Sbjct: 183 ASKDDIMEFFKDFGLPEDSIHIIMNS-EGRPSGEAYAEFASAEDSKAAMVKDRMTLGSRY 241
Query: 96 I 96
I
Sbjct: 242 I 242
>gi|118090272|ref|XP_420600.2| PREDICTED: G-rich sequence factor 1 [Gallus gallus]
Length = 410
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
Query: 12 RYIEVFKVRRQEMDWKLQHT---------GIV-------EGKKDDIAQFFDGLEIISNGI 55
RY++V ++ +++D LQ G+V + +DDIA FF GL I +
Sbjct: 160 RYVKVHEIHDKDVDGLLQSLRYESEVMSDGVVLLRGLPFDSTEDDIADFFAGLRI--TDM 217
Query: 56 TLVEDPFNG-RPTGEAYVQFVDKETAELALQKHKERIGHRYI--FFTGHRYTVQHRAPRC 112
T V + G R TGEAYVQF E AL +HKE + +RYI + + R +H + R
Sbjct: 218 TFV---YRGERKTGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRK 274
Query: 113 E 113
E
Sbjct: 275 E 275
>gi|194389792|dbj|BAG60412.1| unnamed protein product [Homo sapiens]
Length = 355
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E F V+ + + W D++ +FF +I NG + + + GRP+GEA+V
Sbjct: 9 EGFVVKVRGLPWSC--------SADEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFV 59
Query: 73 QFVDKETAELALQK----HKERIGHRYI-FFTGHRYTVQ--HRAPRCETSIPVSSSTHKP 125
+ +E +LAL+K HKERIGHRYI F R V+ + PR ++ +P
Sbjct: 60 ELESEEEVKLALEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRP 119
Query: 126 G 126
G
Sbjct: 120 G 120
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 208 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 263
>gi|25144418|ref|NP_740877.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
gi|351061232|emb|CCD68995.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
Length = 549
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--F 97
DI+ F L I+ +GI L+ D RP GEAYV F E+ ++A Q+H + IGHRYI F
Sbjct: 138 DISDFLAPLPIVRDGI-LLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVF 196
Query: 98 FTGHR 102
HR
Sbjct: 197 EATHR 201
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPF-NGRPTGEAYVQFVDKETAELALQKHKERIGH 93
E + ++ FF +NGI +E P NGR +G+A V F ++E AL+K +E +G
Sbjct: 15 EATEQELRDFFG-----NNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKKDREHLGS 69
Query: 94 RYI 96
RYI
Sbjct: 70 RYI 72
>gi|189238842|ref|XP_970801.2| PREDICTED: similar to fusilli CG8205-PD [Tribolium castaneum]
Length = 683
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
VR + + W + DIA+FF GL + G+ L GR GEA ++F +E
Sbjct: 228 VRARGLPW--------QSSDQDIAKFFSGLNVAKGGVALCLS-AQGRRNGEALIKFESQE 278
Query: 79 TAELALQKHKERIGHRYI 96
++AL++HK IG RYI
Sbjct: 279 HRDMALKRHKHHIGPRYI 296
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 45 FDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DG E G+ V P +GR TG+A+V F + A AL KH+E IG RYI
Sbjct: 357 LDGTE----GVLFVRKP-DGRATGDAFVLFASESDAPKALSKHRECIGSRYI 403
>gi|390465839|ref|XP_003733475.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Callithrix jacchus]
Length = 573
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 44/100 (44%), Gaps = 21/100 (21%)
Query: 14 IEVFKVRRQEMDWKLQ------------------HTGIVEGK-KDDIAQFFDGLEIISNG 54
IEVFK R E+ W L+ H G+ G K + QFF LE + +G
Sbjct: 253 IEVFKSHRTEVSWVLRKHPGPNSASSSNYRFVHXHQGLPSGXHKQETIQFFSELETVPDG 312
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
ITL DP E V +E AE L K KER GHR
Sbjct: 313 ITLSVDP--RESLQEKLVLLASQELAEKVLXKPKERTGHR 350
>gi|341902820|gb|EGT58755.1| CBN-SYM-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+AQFF GL+I+ GI L GR GE VQF +E+ +LAL++H+ + RYI
Sbjct: 223 VAQFFAGLDIVPGGIALCLSS-EGRRNGEVLVQFASQESRDLALKRHRNFLLSRYI 277
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-F 97
+ I FF+ L++ + + +GRPTG+A+VQF +E A+ L KH+ IG RYI
Sbjct: 375 NQIRAFFEPLKLTEKILFITRT--DGRPTGDAFVQFETEEDAQKGLLKHRHIIGQRYIEL 432
Query: 98 FTGHRYTVQHRAPRC 112
F VQ RC
Sbjct: 433 FKSTAAEVQQVVKRC 447
>gi|123704039|ref|NP_001074045.1| epithelial splicing regulatory protein 1 [Danio rerio]
gi|143360736|sp|A1L1G1.1|ESRP1_DANRE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|120537378|gb|AAI29045.1| RNA binding motif protein 35A [Danio rerio]
Length = 714
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+R + + W + DIA+FF GL I G L + GR GEA V+F +E
Sbjct: 227 IRARGLPW--------QSSDQDIARFFRGLNIAKGGAALCLNA-QGRRNGEALVRFESEE 277
Query: 79 TAELALQKHKERIGHRYI 96
+LALQ+HK +G RYI
Sbjct: 278 HRDLALQRHKHHMGGRYI 295
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 39 DDIAQFFDGLEII---SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+ + QFF + S GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 340 EQVLQFFSPACPVTDGSEGILFVRFP-DGRPTGDAFVLFSCEEHAQNALKKHKDMLGKRY 398
Query: 96 I-FFTGHRYTVQHRAPRCETS--IPVSSS 121
I F VQ + ++ IPV+ S
Sbjct: 399 IELFKSTAAEVQQVLNKYSSAPLIPVAPS 427
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 40 DIAQFFD--GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRYI 96
DI F G +I ++G+ +V + GRP+GEA++Q E A LA Q+ HK + RY+
Sbjct: 465 DILVFLGEYGADIKTHGVHMVLN-HQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYV 523
>gi|308464398|ref|XP_003094466.1| CRE-TWK-4 protein [Caenorhabditis remanei]
gi|308247695|gb|EFO91647.1| CRE-TWK-4 protein [Caenorhabditis remanei]
Length = 1026
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ +AQFF GL+I+ GI L GR GE VQF +E+ +LAL++H+ + R
Sbjct: 593 QASDQHVAQFFAGLDIVPGGIALCLSS-EGRRNGEVLVQFATQESRDLALKRHRNFLLSR 651
Query: 95 YI 96
YI
Sbjct: 652 YI 653
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 11 DRYIEVFKVRRQE------------MDWKLQHTGIVEGK-------KDDIAQFFDGLEII 51
RYIEV+K E M++ + IV + I FF+ L++
Sbjct: 650 SRYIEVYKAGLDEFMHVATGSSIEAMEFVSANAVIVRMRGLPYDCTDTQIRAFFEPLKLT 709
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
+ + +GRPTG+A+VQF +E A+ L KH++ IG RYI F VQ
Sbjct: 710 DKILFITRT--DGRPTGDAFVQFETEEDAQKGLLKHRQIIGQRYIELFKSTAAEVQQVVK 767
Query: 111 RC---ETSIPVSSSTHKP 125
RC +S V+++ P
Sbjct: 768 RCNLINSSPAVTNAVEAP 785
>gi|351707744|gb|EHB10663.1| G-rich sequence factor 1 [Heterocephalus glaber]
Length = 455
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 47 GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTV 105
GL I+ IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V
Sbjct: 244 GLNIVD--ITFVMDYRGRRKTGEAYVQFEEPEMASQALMKHREEIGNRYIEIFPSRRNEV 301
Query: 106 Q 106
+
Sbjct: 302 R 302
>gi|357460387|ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355489523|gb|AES70726.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 259
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 37/121 (30%)
Query: 12 RYIEVFKVRRQEMDWKL-----------------------------QHTGIV-------E 35
RY+EVF+ +RQE + +HTG++
Sbjct: 122 RYVEVFRSKRQEYYKAIANEVSDARGGSPRRSAPRAKSYDEGKDSAEHTGVLRLRGLPFS 181
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
KDDI FF + + I +V + GRP+GEAYV+F + + ++ A+ K + +G RY
Sbjct: 182 ANKDDIMDFFKEYVLSEDSIHIVMNS-EGRPSGEAYVEFENADDSKAAMAKDRMTLGSRY 240
Query: 96 I 96
I
Sbjct: 241 I 241
>gi|224059562|ref|XP_002299908.1| predicted protein [Populus trichocarpa]
gi|222847166|gb|EEE84713.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 36/120 (30%)
Query: 12 RYIEVFKVRRQEMDWKL----------------------------QHTGIV-------EG 36
RY+EVF+ +RQ+ + +HTG++
Sbjct: 117 RYVEVFRSKRQDYYKAIANEVSESRGSPRRNISRAKSYDEGKDLAEHTGVLRLRGLPFSA 176
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KDDI +FF ++S + + GRPTGEA+V+F + E ++ A+ K + +G RYI
Sbjct: 177 GKDDIMEFFKDF-VLSEDLIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYI 235
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF GL+I+ + V G+ TGEA+ + ALQK+++ +G RY+
Sbjct: 67 DVAEFFRGLDIVD--VLFVHK--GGKFTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 119
>gi|341896441|gb|EGT52376.1| hypothetical protein CAEBREN_32196, partial [Caenorhabditis
brenneri]
Length = 616
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+AQFF GL+I+ GI L GR GE VQF +E+ +LAL++H+ + RYI
Sbjct: 199 VAQFFAGLDIVPCGIALCLSS-EGRRNGEVLVQFASQESRDLALKRHRNFLLSRYI 253
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 12 RYIEVFKVRRQE------------MDWKLQHTGIV-------EGKKDDIAQFFDGLEIIS 52
RYIEV+K E M++ + IV + + I FF+ L++
Sbjct: 251 RYIEVYKAGLDEFMHVATGSSTEAMEFVSANAVIVRMRGLPYDCSDNQIRAFFEPLKLTE 310
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+ + +GRPTG+A+VQF +E A+ L KH+ IG RYI F VQ R
Sbjct: 311 KILFITRT--DGRPTGDAFVQFETEEDAQKGLLKHRHIIGQRYIELFKSTAAEVQQVVKR 368
Query: 112 C 112
C
Sbjct: 369 C 369
>gi|71998567|ref|NP_495960.2| Protein SYM-2 [Caenorhabditis elegans]
gi|74966269|sp|Q22708.3|SYM2_CAEEL RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
gi|29165341|gb|AAO65265.1| putative RNA binding protein SYM-2 [Caenorhabditis elegans]
gi|33300449|emb|CAA93887.2| Protein SYM-2 [Caenorhabditis elegans]
Length = 618
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 12 RYIEVFKVRRQE------------MDWKLQHTGIVEGK-------KDDIAQFFDGLEIIS 52
RYIEV+K E M++ + IV + I FF+ L++
Sbjct: 249 RYIEVYKAGLDEFMHVATGSSTEAMEFVSANAIIVRMRGLPYDCTDAQIRTFFEPLKLTD 308
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+ + +GRPTG+A+VQF +E A+ L KH++ IG RYI F VQ R
Sbjct: 309 KILFITRT--DGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKR 366
Query: 112 C---ETSIPVSSSTHKP 125
C +S V+++ P
Sbjct: 367 CNLINSSPAVANAVEAP 383
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+AQFF GL+I+ GI L GR GE VQF +E+ +LAL++H+ + RYI
Sbjct: 197 VAQFFAGLDIVPGGIALCLSS-EGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYI 251
>gi|225435437|ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
vinifera]
Length = 258
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 37/121 (30%)
Query: 12 RYIEVFKVRRQEMDWKL-----------------------------QHTGIV-------E 35
RY+EVF+ +RQE + +HTG++
Sbjct: 121 RYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLRLRGLPFS 180
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DI FF + + I + + GRPTGEA+V+F + E ++ A+ K + +G RY
Sbjct: 181 ASKEDIMDFFKDFVLSEDSIHMTVNS-EGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRY 239
Query: 96 I 96
I
Sbjct: 240 I 240
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF L+I+ + V NGR TGEA+ E ALQ++++ +G RY+
Sbjct: 71 DVAEFFHSLDIVD--VLFVHK--NGRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYV 123
>gi|224084107|ref|XP_002307213.1| predicted protein [Populus trichocarpa]
gi|222856662|gb|EEE94209.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 40/124 (32%)
Query: 12 RYIEVFKVRRQ--------EMDW------------------------KLQHTGIVE---- 35
RY+EVF+ +RQ E+++ ++++T I++
Sbjct: 116 RYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPSRAKRFSDKDQMEYTEILKMRGL 175
Query: 36 ---GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIG 92
KK +I +FF ++I I + P +G+ TGEAYV+F+ E A+ A+ K K IG
Sbjct: 176 PFSAKKAEIIEFFKDFKLIDERIHIACRP-DGKATGEAYVEFISAEEAKRAMSKDKMTIG 234
Query: 93 HRYI 96
RY+
Sbjct: 235 SRYV 238
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I +FF GL+I+ + LV +GR TGEA+V F E ALQ+ ++ +G RY+
Sbjct: 66 EILKFFAGLDIVD--VLLVNK--SGRFTGEAFVVFAGPMQVEFALQRDRQNMGRRYV 118
>gi|358248784|ref|NP_001239939.1| uncharacterized protein LOC100805177 [Glycine max]
gi|255644706|gb|ACU22855.1| unknown [Glycine max]
Length = 261
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 37/121 (30%)
Query: 12 RYIEVFKVRRQEMDWKL-----------------------------QHTGIV-------E 35
RY+EVF+ +RQE + +HTG++
Sbjct: 124 RYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKESAEHTGVLRLRGLPFS 183
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
KDDI +FF + + I ++ + GRP+GEAY +F E ++ A+ K + +G RY
Sbjct: 184 ASKDDIMEFFKDFGLPEDSIHIIMNS-EGRPSGEAYAEFESAEDSKAAMIKDRMTLGSRY 242
Query: 96 I 96
I
Sbjct: 243 I 243
>gi|241339179|ref|XP_002408443.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
gi|215497357|gb|EEC06851.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
Length = 293
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 40 DIAQFFDGLEI-ISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I FF E+ I GI+ V + GRP+GEAY++ ++ E+ LQ+H E IGHRYI
Sbjct: 7 EILNFFTSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIGHRYI 66
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 59/147 (40%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFD----- 46
+ RYIEVFK +R EMDW ++ +G + +G K++IAQFF
Sbjct: 61 IGHRYIEVFKSKRSEMDWVVKRSGAHQQDSLNDGCVRLRGLPFGCSKEEIAQFFSGFVEE 120
Query: 47 ------------------------GLEIISNGITLVE-----DPFN--------GRPTGE 69
GL + + E +P N GRP+GE
Sbjct: 121 DGYGDFGGSGGARYSATGHFVHMRGLPFRATERDIFEFFQPMNPMNVHLIYEDSGRPSGE 180
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
V+F E A A+ K K + HRYI
Sbjct: 181 CDVEFATHEEAVKAMSKDKAHMQHRYI 207
>gi|255645750|gb|ACU23368.1| unknown [Glycine max]
Length = 260
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 37/121 (30%)
Query: 12 RYIEVFKVRRQEMDWKL-----------------------------QHTGIVE------- 35
RY+EVF+ +RQE + +HTG++
Sbjct: 123 RYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGLPFF 182
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
KDDI +FF + + I ++ + GRP GEAY +F E ++ A+ K + +G RY
Sbjct: 183 ASKDDIMEFFKDFGLPEDSIHIIMNS-EGRPFGEAYAEFASAEDSKAAMVKDRMTLGSRY 241
Query: 96 I 96
I
Sbjct: 242 I 242
>gi|159485042|ref|XP_001700558.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158272198|gb|EDO98002.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 229
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+G K+DI +FF G + + + L + P +GRP GEA+V F + + A A QK +E G +
Sbjct: 44 KGSKEDIIKFFAGFSLRTEHVFLRKHP-DGRPNGEAFVVFENSDEARRATQKDRETFGEK 102
Query: 95 YIFFTGHRYTVQHRAPRCETSIP 117
+ G RY + P ++ IP
Sbjct: 103 F----GDRYVRVY--PTLDSDIP 119
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
D+ +FF +I G++ + +GRPTG A+++F + A A++K + + G Y
Sbjct: 171 DVRKFFANYKIKPEGVSFIMHA-DGRPTGMAFIEFETPQEAVRAMEKDRAKFGPEY 225
>gi|405971235|gb|EKC36082.1| RNA-binding protein 12 [Crassostrea gigas]
Length = 487
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ 85
DIA+ FDG++I GI +V D NGRP GEA+V+F D E AL
Sbjct: 223 DIAKLFDGIDIAQRGIHIVHDS-NGRPLGEAFVEFSDNSECEKALN 267
>gi|255561415|ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223539109|gb|EEF40705.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 264
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 40/124 (32%)
Query: 12 RYIEVFKVRRQ--------EMDW------------------------KLQHTGIVE---- 35
RY+EVF+ +RQ E+++ +L++T I++
Sbjct: 123 RYVEVFRCKRQDYYNAVAAEVNYEGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMRGL 182
Query: 36 ---GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIG 92
KK +I +FF E++ + I + P +G+ TGEAYV+F + A+ A+ K K IG
Sbjct: 183 PFSAKKPEIIEFFKEFELVEDRIHIACRP-DGKATGEAYVEFASADEAKRAMSKDKMTIG 241
Query: 93 HRYI 96
RY+
Sbjct: 242 SRYV 245
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV NGR TGEA+V F E ALQ+ ++ +G RY+
Sbjct: 73 DIFKFFAGLDIVD--VLLVNK--NGRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYV 125
>gi|255544880|ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223547409|gb|EEF48904.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 260
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 36/120 (30%)
Query: 12 RYIEVFKVRRQEMDWKL----------------------------QHTGIV-------EG 36
RY+EVF+ +RQ+ + +HTG++
Sbjct: 124 RYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRLRGLPFSA 183
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KDDI +FF + + + + + GRPTGEA+V+F E ++ A+ K + +G RYI
Sbjct: 184 GKDDIMEFFKDFVLSEDSVHITMNS-EGRPTGEAFVEFASAEDSKAAMAKDRMTLGSRYI 242
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A+FF GL+I+ + V G+ TGEA+ + ALQK+++ +G RY+
Sbjct: 74 DVAEFFHGLDIVD--VLFVHK--GGKFTGEAFCVLGCPLQVDFALQKNRQNMGRRYV 126
>gi|341899985|gb|EGT55920.1| hypothetical protein CAEBREN_28420 [Caenorhabditis brenneri]
Length = 591
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 24/109 (22%)
Query: 8 EVSDRYIEVFKV--RRQEMDWKLQHTGIVE-------------GKKDDIAQFFDGL---- 48
E+S RYIE+F V E++++ + G+ E K++D+ QFF GL
Sbjct: 126 EMSSRYIEIFTVPESEAELEFRPEPDGVGEENHVVRLRGIPWSCKEEDVLQFFAGLDPPP 185
Query: 49 -EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
E + G + RP+GEA+V+F + AE A++ + +G RY+
Sbjct: 186 AETVIGGTGGPKS----RPSGEAFVRFATQAAAEKAMEYNNRHMGTRYV 230
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF+GL I GRP GEAYV+F KE A ++ ++ + RYI
Sbjct: 80 DIHEFFNGLTIKRVKFVCT----TGRPNGEAYVEFETKEDAGKGMENDRKEMSSRYI 132
>gi|341882686|gb|EGT38621.1| hypothetical protein CAEBREN_04314 [Caenorhabditis brenneri]
Length = 591
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 24/109 (22%)
Query: 8 EVSDRYIEVFKV--RRQEMDWKLQHTGIVEG-------------KKDDIAQFFDGL---- 48
E+S RYIE+F V E++++ + G+ E K++D+ QFF GL
Sbjct: 126 EMSSRYIEIFTVPESEAELEFRPEPDGVGEENHVVRLRGIPWSCKEEDVLQFFAGLDPPP 185
Query: 49 -EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
E + G + RP+GEA+V+F + AE A++ + +G RY+
Sbjct: 186 AETVIGGTGGPKS----RPSGEAFVRFATQAAAEKAMEYNNRHMGTRYV 230
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF+GL I GRP GEAYV+F KE A ++ ++ + RYI
Sbjct: 80 DIHEFFNGLTIKRVKFVCT----TGRPNGEAYVEFETKEDAGKGMENDRKEMSSRYI 132
>gi|281203425|gb|EFA77625.1| hypothetical protein PPL_12232 [Polysphondylium pallidum PN500]
Length = 1794
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I FF + I+ NGIT++ + +G+ +GEAY++FVD++ A A H++ + HRYI
Sbjct: 1167 IRDFFKPVPIMPNGITILMNS-HGKQSGEAYIEFVDEDAARKANDYHRKMMRHRYI 1221
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ--KHKERIGHRYIF 97
D+ FF G I N I L+E +NGR TGE +V+FV ETA AL+ +HK I RYI
Sbjct: 1264 DVISFFSGYAISGNNI-LIEKDYNGRVTGEGFVEFVTFETASSALKHLQHKA-ISSRYIE 1321
Query: 98 FTGH 101
H
Sbjct: 1322 LFPH 1325
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFN-GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D IA FFDGL G+T ++ + GRP+G AYV + + AL+++K +G +
Sbjct: 1732 EDSIADFFDGL-----GVTNIKIIYQRGRPSGLAYVSLSSQYDYDQALKRNKNHMGSSVV 1786
Query: 97 FFTGHRYT 104
H YT
Sbjct: 1787 VTVIHWYT 1794
>gi|118381178|ref|XP_001023750.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila]
gi|89305517|gb|EAS03505.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila
SB210]
Length = 570
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
++DI +FF GL I+ GI GRP GE +V F +K+ A AL H E+I +R+I
Sbjct: 397 EEDIKKFFKGLTILQGGIK--RAILGGRPGGECFVIFQNKDDAHKALNFHMEKIHNRFIE 454
Query: 97 -FFTGHRYTVQHRAPRCETSIPVSSSTHKP 125
F + + A S PV S + P
Sbjct: 455 VFLATVKEFENYMAHNFVNSAPVYSKDNMP 484
>gi|268529124|ref|XP_002629688.1| C. briggsae CBR-SYM-2 protein [Caenorhabditis briggsae]
Length = 613
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFT 99
I FF+ L++ + + +GRPTG A+VQF +E A+ L KH++ IG RYI F
Sbjct: 288 IRAFFEPLKLTEKILFITRT--DGRPTGCAFVQFETEEDAQQGLLKHRQVIGQRYIELFK 345
Query: 100 GHRYTVQHRAPRCE--TSIPVSSST 122
VQ RC S PV ++
Sbjct: 346 STAAEVQQVVKRCNLINSAPVVANA 370
>gi|388504640|gb|AFK40386.1| unknown [Medicago truncatula]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 37/124 (29%)
Query: 9 VSDRYIEVFKVRRQEMDWKL-----------------------------QHTGIVE---- 35
+ RY+EVF+ +RQE + +HTG++
Sbjct: 119 IGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSAPRAKPYDEGKDSAEHTGVLRLRGL 178
Query: 36 ---GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIG 92
KDDI FF + + I +V + GRP GEAYV+F + + ++ A+ K + +G
Sbjct: 179 PFFANKDDIMDFFKEYVLSEDSIHIVMNS-EGRPFGEAYVEFENADDSKAAMAKDRMTLG 237
Query: 93 HRYI 96
RYI
Sbjct: 238 SRYI 241
>gi|268565477|ref|XP_002639457.1| C. briggsae CBR-HRPF-1 protein [Caenorhabditis briggsae]
Length = 556
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI F L I+ +GI L+ D R GEAYV F E+ ++A Q+H + IGHRYI
Sbjct: 132 DINDFLAPLPIVRDGI-LLPDQQRARIAGEAYVVFDSLESVQIAKQRHMKNIGHRYI 187
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 25 DWKLQHTGIV-EGKKDDIAQFFDGLEIISNGITLVEDPF-NGRPTGEAYVQFVDKETAEL 82
++++Q G+ E + D+ FF +NGI ++ P NGR +G+A V F +++
Sbjct: 4 EFQVQCRGLPWEATEQDLRDFFG-----NNGIASLDIPIRNGRTSGDATVTFTNEDDYRQ 58
Query: 83 ALQKHKERIGHRYI 96
AL+K +E +G RYI
Sbjct: 59 ALKKDREHLGSRYI 72
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF I N + L+ D RP+G+A V F ++ + AL K K+ +G RYI
Sbjct: 493 DVYEFF--HPIRPNQVELIRDSQYQRPSGDARVIFYSRKDYDDALMKDKQYMGERYI 547
>gi|356559210|ref|XP_003547893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Glycine
max]
Length = 264
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I +FF ++I + + + P +G+ TGEAYV+FV E A+ A+ K K IG RY+
Sbjct: 188 KSQIVEFFKDFKLIEDRVHIACRP-DGKSTGEAYVEFVSAEEAKRAMSKDKMTIGSRYV 245
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV +GR +GEA+V F E ALQ+ ++ +G RY+
Sbjct: 72 DILKFFAGLTIVD--VLLVNK--SGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 124
>gi|356531343|ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Glycine max]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I +FF ++I + + + P +G+ TGEAYV+FV E A+ A+ K K IG RY+
Sbjct: 181 KSQIVEFFKDFKLIEDRVHIACRP-DGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYV 238
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV +GR +GEA+V F E ALQ+ ++ +G RY+
Sbjct: 65 DILKFFAGLTIVD--VLLVNK--SGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 117
>gi|356531341|ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Glycine max]
Length = 264
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I +FF ++I + + + P +G+ TGEAYV+FV E A+ A+ K K IG RY+
Sbjct: 188 KSQIVEFFKDFKLIEDRVHIACRP-DGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYV 245
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV +GR +GEA+V F E ALQ+ ++ +G RY+
Sbjct: 72 DILKFFAGLTIVD--VLLVNK--SGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 124
>gi|147832351|emb|CAN73277.1| hypothetical protein VITISV_031233 [Vitis vinifera]
Length = 260
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 29 QHTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE 81
+HTG++ K+DI FF + + I + + GRPTGEA+V+F + E ++
Sbjct: 169 EHTGVLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNS-EGRPTGEAFVEFTNAEDSK 227
Query: 82 LALQKHKERIGHRYI 96
A+ K + +G RYI
Sbjct: 228 AAMAKDRMTLGSRYI 242
>gi|442746139|gb|JAA65229.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 206
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 65 RPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
R TGEA+VQF ++ AE A+ KHKE+IGHRYI
Sbjct: 1 RSTGEAFVQFATRDIAEKAMGKHKEKIGHRYI 32
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF + + N + ED +GRP+GE V+F E A A+ K K + HRYI
Sbjct: 126 DIFEFFQPMNPM-NVHLIYED--SGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYI 179
>gi|393909284|gb|EFO25784.2| hypothetical protein LOAG_02706 [Loa loa]
Length = 229
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 41 IAQFF----DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF +G ++ GI V +GRPTG+A+V F +E + AL KHK IG RYI
Sbjct: 97 ILEFFAEGENGCKVTDGGILFVNKS-DGRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYI 155
Query: 97 -FFTGHRYTVQHRAPR 111
F + VQ R
Sbjct: 156 ELFRSTQAEVQQVVNR 171
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
S GI L P GR GEA V+F D E ELAL++H+ + +RYI
Sbjct: 5 SGGIALCLSP-EGRRNGEALVRFEDSEQRELALRRHRHFLHNRYI 48
>gi|402583247|gb|EJW77191.1| hypothetical protein WUBG_11899 [Wuchereria bancrofti]
Length = 82
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 41 IAQFF----DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF +G ++ GI V +GRPTG+A+V F ++E + AL KHK IG RYI
Sbjct: 17 ILEFFAEGENGCKVTDGGILFVNKS-DGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYI 75
>gi|312070751|ref|XP_003138291.1| hypothetical protein LOAG_02706 [Loa loa]
Length = 224
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 41 IAQFF----DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I +FF +G ++ GI V +GRPTG+A+V F +E + AL KHK IG RYI
Sbjct: 92 ILEFFAEGENGCKVTDGGILFVNKS-DGRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYI 150
Query: 97 -FFTGHRYTVQHRAPR 111
F + VQ R
Sbjct: 151 ELFRSTQAEVQQVVNR 166
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI L P GR GEA V+F D E ELAL++H+ + +RYI
Sbjct: 2 GIALCLSP-EGRRNGEALVRFEDSEQRELALRRHRHFLHNRYI 43
>gi|148233440|ref|NP_001079497.1| uncharacterized protein LOC379184 [Xenopus laevis]
gi|27694912|gb|AAH43858.1| MGC53694 protein [Xenopus laevis]
gi|80477878|gb|AAI08882.1| MGC53694 protein [Xenopus laevis]
Length = 658
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
D+ +FF G ++ + + NG G+AYV+F + A+ +L +HKE IGHRYIF
Sbjct: 167 DVKEFFHGFDVEDINFCVRQ---NGDKDGKAYVKFATFQDAKASLSRHKEYIGHRYIFL 222
>gi|297797787|ref|XP_002866778.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297312613|gb|EFH43037.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 255
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 18 KVRRQEMDWKLQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEA 70
+ +R KL++T +++ + K I +FF G ++I + +V P +G+ TGEA
Sbjct: 152 RAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIEGRVQVVCRP-DGKATGEA 210
Query: 71 YVQFVDKETAELALQKHKERIGHRYI 96
+V+F E A A+ K K IG RY+
Sbjct: 211 FVEFETGEEARRAMAKDKMSIGSRYV 236
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV NG+ +GEA+V F E++LQ+ + +G RY+
Sbjct: 64 DIFKFFSGLDIVD--VLLVSK--NGKFSGEAFVVFAGPMQVEISLQRDRHNMGRRYV 116
>gi|145359708|ref|NP_201402.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010757|gb|AED98140.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 255
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 18 KVRRQEMDWKLQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEA 70
+ +R KL++T +++ + K I +FF G ++I + +V P +G+ TGEA
Sbjct: 152 RAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRP-DGKATGEA 210
Query: 71 YVQFVDKETAELALQKHKERIGHRYI 96
+V+F E A A+ K K IG RY+
Sbjct: 211 FVEFETGEEARRAMAKDKMSIGSRYV 236
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV NG+ +GEA+V F E+ALQ+ + +G RY+
Sbjct: 64 DIFEFFAGLNIVD--VLLVSK--NGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYV 116
>gi|334188661|ref|NP_001190629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010758|gb|AED98141.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 158
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 27 KLQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKET 79
KL++T +++ + K I +FF G ++I + +V P +G+ TGEA+V+F E
Sbjct: 64 KLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRP-DGKATGEAFVEFETGEE 122
Query: 80 AELALQKHKERIGHRYI 96
A A+ K K IG RY+
Sbjct: 123 ARRAMAKDKMSIGSRYV 139
>gi|10177116|dbj|BAB10406.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 18 KVRRQEMDWKLQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEA 70
+ +R KL++T +++ + K I +FF G ++I + +V P +G+ TGEA
Sbjct: 145 RAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRP-DGKATGEA 203
Query: 71 YVQFVDKETAELALQKHKERIGHRYI 96
+V+F E A A+ K K IG RY+
Sbjct: 204 FVEFETGEEARRAMAKDKMSIGSRYV 229
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV NG+ +GEA+V F E+ALQ+ + +G RY+
Sbjct: 57 DIFEFFAGLNIVD--VLLVSK--NGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYV 109
>gi|303278009|ref|XP_003058298.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460955|gb|EEH58249.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 230
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 49/151 (32%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKL---------------------------QHTGIVE---- 35
G + RYIEVF+ ++Q+ + +HTG+++
Sbjct: 85 GPMGRRYIEVFRSKKQDYYHAVSIAVNEPDYGNGNGGQGGGYYDNGPLAEHTGVLKLRGL 144
Query: 36 ---GKKDDIAQFFDGLEIISNGIT-LVEDPF------NGRPTGEAYVQFVDKETAELALQ 85
KDDI FFD + G++ LV D +GRP+G A+V+FV E A+ A+
Sbjct: 145 PFSATKDDIITFFDDKSL---GVSPLVHDSIHIVLSVDGRPSGVAFVEFVSAEDAKTAMI 201
Query: 86 KHKERIGHRYI-FFTGHRYTVQHRAPRCETS 115
K + +G RY+ F R A R TS
Sbjct: 202 KDRSSMGTRYVELFPSSR----EEATRAATS 228
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GLE + + +V +GR TGEAYV ++ E+ALQK++ +G RYI
Sbjct: 40 DVQEFFQGLEPVD--VLIVRR--DGRATGEAYVVLANQMLMEVALQKNRGPMGRRYI 92
>gi|390333349|ref|XP_003723691.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Strongylocentrotus purpuratus]
Length = 720
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL I G+ L + +GR GE V F E ++ALQ+HK +G RY+
Sbjct: 235 DVFRFFKGLNIARGGVALCLNT-HGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYV 290
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 36 GKKDDIAQFFDGLEII----SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
+ D+ FF G EI GI V+ NG+ TG+A+V F ++ AL KH+E +
Sbjct: 333 ASEKDVVDFF-GPEIPVAGGEEGILFVKQK-NGKMTGDAFVLFASEDAVSKALSKHREYL 390
Query: 92 GHRYI 96
G+RYI
Sbjct: 391 GNRYI 395
>gi|9294416|dbj|BAB02497.1| unnamed protein product [Arabidopsis thaliana]
Length = 278
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTGI+ + K+DI FF E+ + + + + GRPTGEA+V+F + E +
Sbjct: 186 IEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNG-EGRPTGEAFVEFRNAEDS 244
Query: 81 ELALQKHKERIGHRYI 96
A+ K ++ +G RYI
Sbjct: 245 RAAMVKDRKTLGSRYI 260
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL+++ + V N + TGEA+ + ALQK+++ +G RY+
Sbjct: 58 DVVEFFHGLDVVD--VLFVHR--NNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 110
>gi|268536900|ref|XP_002633585.1| Hypothetical protein CBG05462 [Caenorhabditis briggsae]
Length = 588
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 4 CRTGEVSDRYIEVFKVR--------RQEMDWKLQHTGIV-------EGKKDDIAQFFDGL 48
C E+S+RYIE+F V R + D + +V K++D+ QFF GL
Sbjct: 120 CDRKEMSNRYIEIFSVPISEGENEFRPDADGNGEENHVVRLRGVPWSCKEEDVKQFFQGL 179
Query: 49 EIISNGITL--VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
E I + P RP+GEA+V+F + A+ A++ + +G RY+
Sbjct: 180 EPPPAEIVIGGTSGP-RPRPSGEAFVRFTSQAAAK-AMEYNNMHMGTRYV 227
>gi|334185502|ref|NP_188725.3| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332642915|gb|AEE76436.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 292
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTGI+ + K+DI FF E+ + + + + GRPTGEA+V+F + E +
Sbjct: 200 IEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNG-EGRPTGEAFVEFRNAEDS 258
Query: 81 ELALQKHKERIGHRYI 96
A+ K ++ +G RYI
Sbjct: 259 RAAMVKDRKTLGSRYI 274
>gi|72092573|ref|XP_792820.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Strongylocentrotus purpuratus]
Length = 752
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL I G+ L + +GR GE V F E ++ALQ+HK +G RY+
Sbjct: 235 DVFRFFKGLNIARGGVALCLNT-HGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYV 290
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 36 GKKDDIAQFFDGLEII----SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
+ D+ FF G EI GI V+ NG+ TG+A+V F ++ AL KH+E +
Sbjct: 333 ASEKDVVDFF-GPEIPVAGGEEGILFVKQK-NGKMTGDAFVLFASEDAVSKALSKHREYL 390
Query: 92 GHRYI 96
G+RYI
Sbjct: 391 GNRYI 395
>gi|184185561|gb|ACC68959.1| RNA-binding protein 12 (predicted) [Rhinolophus ferrumequinum]
Length = 946
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALSRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
Query: 98 FTGHRYTVQ 106
H T+Q
Sbjct: 616 V--HVVTLQ 622
>gi|388507286|gb|AFK41709.1| unknown [Lotus japonicus]
Length = 163
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I FF ++I + + + P +G+ TGEAYV+FV + A+ A+ K K IG RY+
Sbjct: 87 KSQIVDFFKDYKLIEDRVHIACRP-DGKATGEAYVEFVSPDEAKRAMSKDKMMIGSRYV 144
>gi|328874866|gb|EGG23231.1| hypothetical protein DFA_05363 [Dictyostelium fasciculatum]
Length = 939
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ DI+ FF+GL+I+ GI +V RP G AYV F + + AL ++ + +G RYI
Sbjct: 812 ESDISTFFNGLDIVQGGIKIVYQ--RDRPMGIAYVTFTNSDDYHQALSRNNQHLGPRYI 868
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+D + +FF L++ + I + + NG+ TG+A V+F +E A L+L +HK+ +G RYI
Sbjct: 444 EDAVREFFQPLDV--SFIDIFYNS-NGKQTGDASVEFATEEDANLSLDRHKQMMGTRYIE 500
Query: 98 FTGHR 102
R
Sbjct: 501 VISRR 505
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYI-F 97
DI +F +G I SN I + + GR +GEAYV+F + A+ AL + + + RYI F
Sbjct: 560 DIRKFLNGYPIKSNNILMTMND-EGRFSGEAYVEFQTSDIAQAALSNLQNKTMMSRYIEF 618
Query: 98 FTGHRYTVQH 107
FT R+ H
Sbjct: 619 FTCDRFIHFH 628
>gi|359476979|ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
vinifera]
Length = 264
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV +GR +GEAYV F A+ ALQ+ ++ +G RY+
Sbjct: 73 DIFKFFAGLDIVD--VLLVNK--SGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 125
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 27 KLQHTGIVE-------GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKET 79
+++HT I++ KK I +FF E+ + + + P +G+ TGEAYV+F E
Sbjct: 170 QMEHTEILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRP-DGKATGEAYVEFASAEE 228
Query: 80 AELALQKHKERIGHRYI 96
A+ A+ K K IG RY+
Sbjct: 229 AKKAMGKDKMTIGSRYV 245
>gi|302828822|ref|XP_002945978.1| splicing factor like protein [Volvox carteri f. nagariensis]
gi|300268793|gb|EFJ52973.1| splicing factor like protein [Volvox carteri f. nagariensis]
Length = 578
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE---------------GKKDDIAQFFDGLEIISNGIT 56
RYIEVF+ E D + V+ D+ FF + GI
Sbjct: 102 RYIEVFE--STEADLATAKSLSVDRMRGFVVRCRGLPYTATAQDVLNFFGSDAPVVRGIE 159
Query: 57 LVEDPF--NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
V + +GRPTGEA+V+F ++ AL+KHKE +G RYI
Sbjct: 160 GVVFTYAPDGRPTGEAFVEFQTEDAQREALKKHKESMGARYI 201
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRYI 96
++D+ FF G + +V GR TGE YVQ A A+ K H++ +GHRYI
Sbjct: 49 EEDVRHFFSGFNVAQ----VVIGKRAGRSTGEGYVQLDSTSAAAEAIMKLHRQTLGHRYI 104
>gi|159164103|pdb|2DHA|A Chain A, Solution Structure Of The Second Rna Recognition Motif
In Hypothetical Protein Flj201171
Length = 123
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 56 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 97
>gi|449434084|ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 263
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 39/123 (31%)
Query: 12 RYIEVFKVRRQ--------EMDW-----------------------KLQHTGIVEGK--- 37
RY+EVF+ +RQ E+++ ++++T I++ +
Sbjct: 123 RYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLP 182
Query: 38 ----KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
K +I +FF ++ + I + P +G+ TGEAYV+F E A+ A+ K K IG
Sbjct: 183 FSVTKSNIIEFFGEFDLAEDRIHIASRP-DGKATGEAYVEFASAEEAKRAMSKDKMTIGS 241
Query: 94 RYI 96
RY+
Sbjct: 242 RYV 244
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV NGR GEA+V F E ALQ+ ++ +G RY+
Sbjct: 73 DIFKFFAGLDIVD--VLLVNK--NGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 125
>gi|147834707|emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
Length = 257
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV +GR +GEAYV F A+ ALQ+ ++ +G RY+
Sbjct: 66 DIFKFFAGLDIVD--VLLVNK--SGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 118
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 27 KLQHTGIVE-------GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKET 79
+++HT I++ KK I +FF E+ + + + P +G+ TGEAYV+F E
Sbjct: 163 QMEHTEILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRP-DGKATGEAYVEFASAEE 221
Query: 80 AELALQKHKERIGHRYI 96
A+ A+ K K IG RY+
Sbjct: 222 AKKAMGKDKMTIGSRYV 238
>gi|74095965|ref|NP_001027829.1| swan [Takifugu rubripes]
gi|31324616|gb|AAP48570.1| swan [Takifugu rubripes]
Length = 889
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 3 HCRTG---EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVE 59
HCR E D+ RQE L+ E K I +FF+ L II + I +
Sbjct: 402 HCRNNSGVEARDQRGRSRSPHRQEFCIYLKGLP-YEADKKQIKEFFNNLAIIEDSIYIAY 460
Query: 60 DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
P NGR TGE +++F ++ + AL H + +G R+I
Sbjct: 461 GP-NGRATGEGFLEFKTEQDHKAALGAHMQYMGSRFI 496
>gi|449491253|ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 256
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 39/123 (31%)
Query: 12 RYIEVFKVRRQ--------EMDW-----------------------KLQHTGIVEGK--- 37
RY+EVF+ +RQ E+++ ++++T I++ +
Sbjct: 116 RYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLP 175
Query: 38 ----KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
K +I +FF ++ + I + P +G+ TGEAYV+F E A+ A+ K K IG
Sbjct: 176 FSVTKSNIIEFFGEFDLAEDRIHIASRP-DGKATGEAYVEFASAEEAKRAMSKDKMTIGS 234
Query: 94 RYI 96
RY+
Sbjct: 235 RYV 237
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + LV NGR GEA+V F E ALQ+ ++ +G RY+
Sbjct: 66 DIFKFFAGLDIVD--VLLVNK--NGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 118
>gi|297612598|ref|NP_001066073.2| Os12g0131000 [Oryza sativa Japonica Group]
gi|255670013|dbj|BAF29092.2| Os12g0131000 [Oryza sativa Japonica Group]
Length = 292
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + +V P +G+ TGE
Sbjct: 198 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTDENVHIVYRP-DGKATGE 246
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
AYV+F E + A+ K K IG RY+
Sbjct: 247 AYVEFPTAEVVKTAMCKDKMTIGTRYV 273
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 100 DICKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 152
>gi|346703709|emb|CBX24377.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E +I +FF E+ + +V P +G+ TGE
Sbjct: 197 SMEYTEVLKLR------GLPYSATTE----EIIKFFVEYELTDENVHIVYRP-DGKATGE 245
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
AYV+F E A+ A+ K K IG RY+
Sbjct: 246 AYVEFPTAEVAKTAMCKDKMTIGTRYV 272
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 99 DICKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 151
>gi|222616578|gb|EEE52710.1| hypothetical protein OsJ_35118 [Oryza sativa Japonica Group]
Length = 291
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + +V P +G+ TGE
Sbjct: 197 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTDENVHIVYRP-DGKATGE 245
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
AYV+F E + A+ K K IG RY+
Sbjct: 246 AYVEFPTAEVVKTAMCKDKMTIGTRYV 272
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 99 DICKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 151
>gi|348564119|ref|XP_003467853.1| PREDICTED: RNA-binding protein 12-like [Cavia porcellus]
Length = 1467
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 871 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 929
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 930 LMAHCKTLVQLSISCD 945
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSEHLHRKKLNGREAF 615
>gi|346703322|emb|CBX25419.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 99 DICKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 151
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + P +G+ TGE
Sbjct: 197 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTEENVHIAYRP-DGKATGE 245
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 246 AFVEFPTAEVAKTAMCKDKMTIGTRYV 272
>gi|403281161|ref|XP_003932066.1| PREDICTED: RNA-binding protein 12 [Saimiri boliviensis boliviensis]
Length = 1465
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 869 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 927
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 928 LMAHCMTLVQLSISCD 943
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|332248945|ref|XP_003273625.1| PREDICTED: RNA-binding protein 12-like isoform 3 [Nomascus
leucogenys]
Length = 1466
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 870 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 928
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 929 LMAHCVTLVQLSISCD 944
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|169731516|gb|ACA64888.1| RNA binding motif protein 12 (predicted) [Callicebus moloch]
Length = 1465
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 869 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 927
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 928 LMAHCVTLVQLSISCD 943
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|166831595|gb|ABY90120.1| RNA binding motif protein 12 (predicted) [Callithrix jacchus]
Length = 1460
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 864 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 922
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 923 LMAHCVTLVQLSISCD 938
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|77553600|gb|ABA96396.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
Length = 235
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 48 DICKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 100
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + +V P +G+ TGE
Sbjct: 146 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTDENVHIVYRP-DGKATGE 194
Query: 70 AYVQFVDKETAELALQKHKERIG 92
AYV+F E + A+ K K IG
Sbjct: 195 AYVEFPTAEVVKTAMCKDKMTIG 217
>gi|426391523|ref|XP_004062122.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Gorilla
gorilla gorilla]
Length = 1474
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 448 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 506
Query: 95 YI 96
+I
Sbjct: 507 FI 508
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 878 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 936
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 937 LMAHCVTLVQLSISCD 952
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 565 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 623
>gi|281182775|ref|NP_001162483.1| RNA-binding protein 12 [Papio anubis]
gi|164623749|gb|ABY64675.1| RNA binding motif protein 12 (predicted) [Papio anubis]
Length = 1466
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 870 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 928
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 929 LMAHCVTLVQLSISCD 944
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|339245667|ref|XP_003374467.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972254|gb|EFV55937.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 370
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+GR +GE +V+F +KE E AL +H E+IGHRYI
Sbjct: 84 SGRASGEGFVRFSNKEATERALDRHMEKIGHRYI 117
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DI +FF ++I++ I E RPTGEA V+F + A AL+K ++ +G RYI
Sbjct: 217 NDIMEFFYPIKIMNVRILFDE---RNRPTGEADVEFQCESDALEALKKDRKTMGERYI 271
>gi|449667958|ref|XP_002158900.2| PREDICTED: epithelial splicing regulatory protein 1-like [Hydra
magnipapillata]
Length = 503
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 6 TGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGR 65
TG V D I VR + + W++ D+A FF GL I G+ L + GR
Sbjct: 208 TGYVKDDTI----VRARGLPWQVSDV--------DVAAFFTGLNIAKGGVALCLN-VKGR 254
Query: 66 PTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GEA V+F E ++AL++HK + RYI
Sbjct: 255 RNGEALVRFESSEHRDMALRRHKHHLLGRYI 285
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 40 DIAQFF-DGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF D +++ NG+ L+ P +G TG+A+V F + + AL+KH+E IG RY+
Sbjct: 334 DVVEFFGDSPKVLQGKNGVMLISYP-DGASTGDAFVLFETEAEGQFALKKHRENIGKRYV 392
Query: 97 -FFTGHRYTVQH 107
F R +Q
Sbjct: 393 ELFRSTRAELQQ 404
>gi|431894345|gb|ELK04145.1| RNA-binding protein 12 [Pteropus alecto]
Length = 899
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|417413254|gb|JAA52964.1| Putative rna binding protein rbm12/swan, partial [Desmodus
rotundus]
Length = 960
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 462 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 520
Query: 95 YI 96
+I
Sbjct: 521 FI 522
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 579 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 637
>gi|395830118|ref|XP_003788182.1| PREDICTED: RNA-binding protein 12 [Otolemur garnettii]
Length = 1478
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|20521648|dbj|BAA34485.2| KIAA0765 protein [Homo sapiens]
Length = 952
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 460 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 518
Query: 95 YI 96
+I
Sbjct: 519 FI 520
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 577 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 635
>gi|159469283|ref|XP_001692797.1| splicing factor [Chlamydomonas reinhardtii]
gi|158278050|gb|EDP03816.1| splicing factor [Chlamydomonas reinhardtii]
Length = 647
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPF--NGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF I GI V + +GRPTGEA+V+ +E AL+KHKE +G RYI
Sbjct: 133 DVLNFFGADVPIVRGIEGVVFTYAPDGRPTGEAFVELQTEEAQREALKKHKESLGSRYI 191
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRYI 96
+DD+ QFF E+ T+V GR TGE YVQ A A+ K H++ +GHRYI
Sbjct: 39 EDDVRQFFADFEVA----TVVIGKRAGRSTGEGYVQLDSVAAAADAIAKLHRQTLGHRYI 94
>gi|410953920|ref|XP_003983616.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Felis catus]
Length = 1482
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 886 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 944
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 945 LMAHCVTLVQLSISCD 960
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|197215644|gb|ACH53036.1| RNA binding motif protein 12, isoform 1 (predicted) [Otolemur
garnettii]
Length = 1475
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|196003222|ref|XP_002111478.1| hypothetical protein TRIADDRAFT_13868 [Trichoplax adhaerens]
gi|190585377|gb|EDV25445.1| hypothetical protein TRIADDRAFT_13868, partial [Trichoplax
adhaerens]
Length = 302
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+A FF GL II GI+ + + G+ G+AYV+F D +LAL++H + I + I
Sbjct: 14 DVASFFRGLNIIRGGISFLLSEY-GKRYGQAYVKFEDTVQRDLALKRHSQYIDQKSI 69
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 40 DIAQFFDGL--EIISNGITLVEDPFNGRPTGEAYVQFVDKETA-ELALQKHKERIGHRYI 96
DI F L +I NGI L + GRP+G+AY+Q + E A + A +KH+E +G R+I
Sbjct: 234 DITNFMGELADKIALNGIHLCIND-RGRPSGDAYIQMLSAEDAIKSAEKKHREHLGTRWI 292
>gi|50949507|emb|CAH10603.1| hypothetical protein [Homo sapiens]
Length = 954
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 462 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 520
Query: 95 YI 96
+I
Sbjct: 521 FI 522
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 579 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 637
>gi|332248953|ref|XP_003273629.1| PREDICTED: RNA-binding protein 12-like isoform 7 [Nomascus
leucogenys]
Length = 932
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|312032395|ref|NP_001185821.1| RNA-binding protein 12 [Bos taurus]
Length = 953
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|74136241|ref|NP_001028012.1| RNA-binding protein 12 [Macaca mulatta]
gi|30173333|sp|Q8SQ27.1|RBM12_MACMU RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|19070196|gb|AAL83753.1| SWAN [Macaca mulatta]
gi|355563178|gb|EHH19740.1| RNA-binding motif protein 12 [Macaca mulatta]
gi|355784534|gb|EHH65385.1| RNA-binding motif protein 12 [Macaca fascicularis]
gi|380808606|gb|AFE76178.1| RNA-binding protein 12 [Macaca mulatta]
gi|380808608|gb|AFE76179.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944626|gb|AFI35918.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944628|gb|AFI35919.1| RNA-binding protein 12 [Macaca mulatta]
Length = 932
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|19923345|ref|NP_006038.2| RNA-binding protein 12 [Homo sapiens]
gi|23510462|ref|NP_690051.1| RNA-binding protein 12 [Homo sapiens]
gi|311893287|ref|NP_001185767.1| RNA-binding protein 12 [Homo sapiens]
gi|312032348|ref|NP_001185769.1| RNA-binding protein 12 [Homo sapiens]
gi|353411938|ref|NP_001238775.1| RNA-binding protein 12 [Pan troglodytes]
gi|397523818|ref|XP_003831915.1| PREDICTED: RNA-binding protein 12 [Pan paniscus]
gi|30173387|sp|Q9NTZ6.1|RBM12_HUMAN RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|15215375|gb|AAH12787.1| RNA binding motif protein 12 [Homo sapiens]
gi|15559252|gb|AAH13981.1| RNA binding motif protein 12 [Homo sapiens]
gi|19070194|gb|AAL83752.1| SWAN [Homo sapiens]
gi|19070200|gb|AAL83755.1| SWAN [Homo sapiens]
gi|21666372|gb|AAM73682.1| swan [Homo sapiens]
gi|119596588|gb|EAW76182.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596590|gb|EAW76184.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596594|gb|EAW76188.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|123993635|gb|ABM84419.1| RNA binding motif protein 12 [synthetic construct]
gi|123999855|gb|ABM87436.1| RNA binding motif protein 12 [synthetic construct]
gi|168278717|dbj|BAG11238.1| RNA binding motif protein 12 [synthetic construct]
gi|193787298|dbj|BAG52504.1| unnamed protein product [Homo sapiens]
gi|410216986|gb|JAA05712.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410216988|gb|JAA05713.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260650|gb|JAA18291.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260652|gb|JAA18292.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297724|gb|JAA27462.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297726|gb|JAA27463.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410355577|gb|JAA44392.1| RNA binding motif protein 12 [Pan troglodytes]
Length = 932
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|197100361|ref|NP_001125474.1| RNA-binding protein 12 [Pongo abelii]
gi|75070796|sp|Q5RBM8.1|RBM12_PONAB RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12
gi|55728164|emb|CAH90832.1| hypothetical protein [Pongo abelii]
Length = 932
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|12053991|emb|CAC20441.1| RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKTERLHRKKLNGREAF 615
>gi|344279913|ref|XP_003411730.1| PREDICTED: RNA-binding protein 12-like isoform 2 [Loxodonta
africana]
Length = 924
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|344279911|ref|XP_003411729.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Loxodonta
africana]
Length = 936
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|426241394|ref|XP_004014576.1| PREDICTED: RNA-binding protein 12 isoform 1 [Ovis aries]
Length = 931
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|426241396|ref|XP_004014577.1| PREDICTED: RNA-binding protein 12 isoform 2 [Ovis aries]
Length = 926
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|351702538|gb|EHB05457.1| RNA-binding protein 12 [Heterocephalus glaber]
Length = 850
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSEHLHRKKLNGREAF 615
>gi|444729174|gb|ELW69601.1| RNA-binding protein 12 [Tupaia chinensis]
Length = 932
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQAVVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|297830788|ref|XP_002883276.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
gi|297329116|gb|EFH59535.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 28 LQHTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTG + K+DI FF E+ + + + + GRPTGEA+V+F + E +
Sbjct: 264 IEHTGTLRLRGLPFSAGKEDILDFFKDFELSEDSVHVTVNG-EGRPTGEAFVEFRNAEES 322
Query: 81 ELALQKHKERIGHRYI 96
A+ K ++ +G RYI
Sbjct: 323 RAAMVKDRKTLGSRYI 338
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL+++ + V N + TGEA+ + ALQK+++ +G RY+
Sbjct: 136 DVVEFFHGLDVVD--VLFVHK--NNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 188
>gi|284520924|ref|NP_001165219.1| RNA-binding protein 12 [Canis lupus familiaris]
Length = 923
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|301762096|ref|XP_002916483.1| PREDICTED: RNA-binding protein 12-like [Ailuropoda melanoleuca]
gi|281346062|gb|EFB21646.1| hypothetical protein PANDA_004540 [Ailuropoda melanoleuca]
Length = 923
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|229368727|gb|ACQ63010.1| RNA binding motif protein 12, isoform 2 (predicted) [Dasypus
novemcinctus]
Length = 900
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENSVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|284519716|ref|NP_001165217.1| RNA-binding protein 12 [Equus caballus]
Length = 928
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF ++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDS-NGQGLGQALVQFKSEDDARKSERLHRKKLNGREAF 615
Query: 98 FTGHRYTVQ 106
H TV+
Sbjct: 616 V--HVVTVE 622
>gi|21740240|emb|CAD39131.1| hypothetical protein [Homo sapiens]
Length = 663
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 171 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 229
Query: 95 YI 96
+I
Sbjct: 230 FI 231
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 288 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 346
>gi|194387896|dbj|BAG61361.1| unnamed protein product [Homo sapiens]
Length = 731
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 239 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 297
Query: 95 YI 96
+I
Sbjct: 298 FI 299
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 356 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 414
>gi|350594874|ref|XP_003483994.1| PREDICTED: RNA-binding protein 12 isoform 1 [Sus scrofa]
gi|350594876|ref|XP_003483995.1| PREDICTED: RNA-binding protein 12 isoform 2 [Sus scrofa]
gi|350594878|ref|XP_003483996.1| PREDICTED: RNA-binding protein 12 isoform 3 [Sus scrofa]
Length = 933
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|159163272|pdb|1WEL|A Chain A, Solution Structure Of Rna Binding Domain In Np_006038
Length = 124
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 36 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 94
Query: 95 YI 96
+I
Sbjct: 95 FI 96
>gi|284004917|ref|NP_001164804.1| RNA-binding protein 12 [Oryctolagus cuniculus]
gi|217038336|gb|ACJ76629.1| RNA binding motif protein 12 (predicted) [Oryctolagus cuniculus]
Length = 940
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 441 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 499
Query: 95 YI 96
+I
Sbjct: 500 FI 501
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + H++++ R F
Sbjct: 558 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSEHLHRKKLNGREAF 616
>gi|47211266|emb|CAF91568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 823
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E K I +FF L II + I + P NGR TGE +++F ++ + AL H + +G R
Sbjct: 370 EADKKQIKEFFSNLAIIEDSIYIAYGP-NGRATGEGFLEFKTEQDHKAALGAHMQYMGSR 428
Query: 95 YI 96
+I
Sbjct: 429 FI 430
>gi|354477974|ref|XP_003501192.1| PREDICTED: RNA-binding protein 12 [Cricetulus griseus]
Length = 1463
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 867 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 925
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 926 LMAHCVTLVQLSISCD 941
>gi|84043632|ref|XP_951606.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma brucei
TREU927]
gi|33348520|gb|AAQ15845.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359177|gb|AAX79621.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei]
Length = 487
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 19 VRRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDK 77
V RQ + ++ G+ ++ IA+FF G++I G+ +V D N R TGEA+V+ D+
Sbjct: 379 VARQPSPFVVRIRGVPYSASEEAIAEFFAGVKIPPQGVHMVYDERN-RLTGEAFVEVEDR 437
Query: 78 ETAELALQKHKERIGHRYI 96
LAL ++ +G RYI
Sbjct: 438 NDVLLALDRNGAMMGTRYI 456
>gi|261326510|emb|CBH09471.1| heterogeneous nuclear ribonucleoprotein H/F,putative [Trypanosoma
brucei gambiense DAL972]
Length = 488
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 19 VRRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDK 77
V RQ + ++ G+ ++ IA+FF G++I G+ +V D N R TGEA+V+ D+
Sbjct: 380 VARQPSPFVVRIRGVPYSASEEAIAEFFAGVKIPPQGVHMVYDERN-RLTGEAFVEVEDR 438
Query: 78 ETAELALQKHKERIGHRYI 96
LAL ++ +G RYI
Sbjct: 439 NDVLLALDRNGAMMGTRYI 457
>gi|148674224|gb|EDL06171.1| mCG5227, isoform CRA_a [Mus musculus]
gi|148674225|gb|EDL06172.1| mCG5227, isoform CRA_a [Mus musculus]
Length = 773
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|190402267|gb|ACE77677.1| RNA binding motif protein 12, isoform 1 (predicted) [Sorex araneus]
Length = 1520
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGSR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 924 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVFDLNDRPIGSRKVK 982
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 983 LMAHCVTLVQLSVSCD 998
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|26330362|dbj|BAC28911.1| unnamed protein product [Mus musculus]
Length = 992
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|115484017|ref|NP_001065670.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|77548595|gb|ABA91392.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
gi|113644374|dbj|BAF27515.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|215764972|dbj|BAG86669.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615462|gb|EEE51594.1| hypothetical protein OsJ_32846 [Oryza sativa Japonica Group]
Length = 298
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 107 DIFKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 159
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + P +G+ TGE
Sbjct: 204 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTEENVHIAYRP-DGKATGE 252
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 253 AFVEFPTAEVAKTAMCKDKMTIGTRYV 279
>gi|218185179|gb|EEC67606.1| hypothetical protein OsI_34981 [Oryza sativa Indica Group]
Length = 270
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + P +G+ TGE
Sbjct: 176 SMEYTEVLKLR------GLPYSATTE----DIIKFFVEYELTEENVHIAYRP-DGKATGE 224
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 225 AFVEFPTAEVAKTAMCKDKMTIGTRYV 251
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G RY+
Sbjct: 99 DIFKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYV 151
>gi|296480483|tpg|DAA22598.1| TPA: mCG11326-like [Bos taurus]
Length = 290
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 152 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 207
>gi|74184867|dbj|BAE39056.1| unnamed protein product [Mus musculus]
Length = 914
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 362 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 420
Query: 95 YI 96
+I
Sbjct: 421 FI 422
>gi|340372253|ref|XP_003384659.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Amphimedon queenslandica]
Length = 848
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DIA F GL II G+ +P GR TGEA V ++ A+ ALQ+ + + RY+
Sbjct: 226 NDIALFLSGLNIIPGGVVFSINPV-GRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYV 282
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISN---GITLVEDPFNGRPTGEAY 71
+VF VR Q + ++ + DI +FF +SN GI +V P +G+ +G+A+
Sbjct: 304 KVFTVRMQGLPYR--------ATESDIMEFFQPEAPVSNEADGILIVRYP-DGKASGDAF 354
Query: 72 VQFVDKETAELALQKHKERIGHRYI 96
F + E AL+KH+ + RYI
Sbjct: 355 AVFSSEAHVEEALKKHRNNLMGRYI 379
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 35 EGKKDDIAQFFDGL--EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERI 91
E +D+ FF L I GI +V + RPTG+ +VQ + A A + H++ I
Sbjct: 433 EATPEDVISFFGDLNRSIEQQGIHMVLNA-QSRPTGDCFVQMTSVDAATRAANELHRQNI 491
Query: 92 GHRYI 96
G RYI
Sbjct: 492 GRRYI 496
>gi|168066869|ref|XP_001785353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663050|gb|EDQ49838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF GL+++ + LV NGR +GEAYV F + ALQK++ IG RYI
Sbjct: 43 DVFDFFAGLDVVD--VLLVR--MNGRFSGEAYVVFGAPVQVDYALQKNRHNIGRRYI 95
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVE-------GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
L TG+V+ K D+ FF E+ + ++ +GR TGEA+V F A
Sbjct: 149 LNFTGVVKLRGLPFSATKSDVMDFFREFELHDEHVHIMLHS-DGRTTGEAFVDFGSASKA 207
Query: 81 ELALQKHKERIGHRYI 96
+ A+ K K +G RY+
Sbjct: 208 KSAMNKDKMTMGSRYV 223
>gi|255071701|ref|XP_002499525.1| predicted protein [Micromonas sp. RCC299]
gi|226514787|gb|ACO60783.1| predicted protein [Micromonas sp. RCC299]
Length = 251
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+ + + +V +GR TGEAYV F + + ALQK++ +G RYI
Sbjct: 34 DILEFFQGLDPVD--VLIVRR--DGRATGEAYVLFANPMQMDFALQKNRGPMGRRYI 86
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 14/81 (17%)
Query: 29 QHTGIVE-------GKKDDIAQFFD--GLEIIS----NGITLVEDPFNGRPTGEAYVQFV 75
+HTG+++ KDDI F+D L + + + I +V +GRP+G A+V+F
Sbjct: 154 EHTGVLKMRGLPFSATKDDIITFYDDPALSVTAPLTHDSIHIVTS-LDGRPSGMAFVEFA 212
Query: 76 DKETAELALQKHKERIGHRYI 96
E A+ A+ + + +G RY+
Sbjct: 213 SAEDAKAAMSRDRCTMGSRYV 233
>gi|170047639|ref|XP_001851321.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870002|gb|EDS33385.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 677
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++GI V+ P +GR TG+A+V F + A AL KH+E IG RYI
Sbjct: 179 ADGILFVKKP-DGRATGDAFVLFAQESDASKALSKHRESIGQRYI 222
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ L P GR GEA V+FV +E ++AL++HK I +RYI
Sbjct: 74 GVALCLSP-QGRRNGEALVRFVSQEHRDMALKRHKHHISNRYI 115
>gi|83320105|ref|NP_001032746.1| RNA-binding protein 12 [Rattus norvegicus]
gi|31324614|gb|AAP48569.1| swan [Rattus norvegicus]
gi|149030841|gb|EDL85868.1| rCG37481, isoform CRA_a [Rattus norvegicus]
gi|149030844|gb|EDL85871.1| rCG37481, isoform CRA_a [Rattus norvegicus]
Length = 1032
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|114155120|ref|NP_083673.3| RNA-binding protein 12 [Mus musculus]
gi|114155125|ref|NP_733486.2| RNA-binding protein 12 [Mus musculus]
gi|262527571|sp|Q8R4X3.3|RBM12_MOUSE RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|26348755|dbj|BAC38017.1| unnamed protein product [Mus musculus]
gi|30851612|gb|AAH52473.1| RNA binding motif protein 12 [Mus musculus]
Length = 992
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|294461466|gb|ADE76294.1| unknown [Picea sitchensis]
Length = 262
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTGI++ + K DI +FF ++ + +V +GR TGEA+V+F + +
Sbjct: 169 MEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVHIVSHS-DGRATGEAFVEFSNDTDS 227
Query: 81 ELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+ A+ K K IG RY+ F R A R
Sbjct: 228 KAAMSKDKMMIGTRYVELFPSTREEASRAASR 259
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ +FF GL+++ + LV GR +GE +V F + ALQ+ ++ +G RYI
Sbjct: 73 NDVCEFFAGLDVVD--VLLVHK--QGRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYI 126
>gi|211830818|gb|AAH26891.2| Rbm12 protein [Mus musculus]
Length = 887
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 325 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 383
Query: 95 YI 96
+I
Sbjct: 384 FI 385
>gi|226500358|ref|NP_001148837.1| LOC100282455 [Zea mays]
gi|195622512|gb|ACG33086.1| RNA binding protein [Zea mays]
gi|238009718|gb|ACR35894.1| unknown [Zea mays]
Length = 303
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL+I+ LV NGR TGEA+V F AE AL + ++ +G RY+
Sbjct: 111 DVCKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYV 163
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 209 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELAEENVHIAYRS-DGKATGE 257
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 258 AFVEFPTAEVAKTAMCKDKMTIGTRYV 284
>gi|37360080|dbj|BAC98018.1| mKIAA0765 protein [Mus musculus]
Length = 569
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 351 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 409
Query: 95 YI 96
+I
Sbjct: 410 FI 411
>gi|294460097|gb|ADE75631.1| unknown [Picea sitchensis]
Length = 256
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTGI++ + K DI +FF ++ + +V +GR TGEA+V+F + +
Sbjct: 163 MEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVHIVSHS-DGRATGEAFVEFSNDTDS 221
Query: 81 ELALQKHKERIGHRYI-FFTGHRYTVQHRAPR 111
+ A+ K K IG RY+ F R A R
Sbjct: 222 KAAMSKDKMMIGTRYVELFPSTREEASRAASR 253
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ +FF GL+++ + LV GR +GE +V F + ALQ+ ++ +G RYI
Sbjct: 67 NDVCEFFAGLDVVD--VLLVHK--QGRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYI 120
>gi|229891743|sp|A8WPC5.2|SYM2_CAEBR RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
Length = 634
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTG--EAYVQFVDKETAELALQKHKERIGHRYI-F 97
I FF+ L++ + + +GRPTG +A+VQF +E A+ L KH++ IG RYI
Sbjct: 301 IRAFFEPLKLTEKILFITRT--DGRPTGNCDAFVQFETEEDAQQGLLKHRQVIGQRYIEL 358
Query: 98 FTGHRYTVQHRAPRCE--TSIPVSSST 122
F VQ RC S PV ++
Sbjct: 359 FKSTAAEVQQVVKRCNLINSAPVVANA 385
>gi|167535939|ref|XP_001749642.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771790|gb|EDQ85451.1| predicted protein [Monosiga brevicollis MX1]
Length = 948
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE---LALQKHKERIGHR 94
+DD+ F I +N + V NGRPTG AY F ++ LA+++HK +IG R
Sbjct: 681 RDDVYDFLQPSGINANNV-FVCHALNGRPTGTAYAVFSGSTASQCFDLAMRQHKSKIGDR 739
Query: 95 YI 96
YI
Sbjct: 740 YI 741
>gi|19070198|gb|AAL83754.1| SWAN [Mus musculus]
gi|21666374|gb|AAM73683.1| swan [Mus musculus]
gi|21666376|gb|AAM73684.1| swan [Mus musculus]
Length = 1003
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|296199717|ref|XP_002747276.1| PREDICTED: RNA-binding protein 12 isoform 1 [Callithrix jacchus]
Length = 1460
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 864 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVK 922
Query: 98 FTGHRYTVQHRAPRCE 113
H T+ + C+
Sbjct: 923 LMAHCVTLVQLSISCD 938
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 557 KMDVLQFLEGIPVDENAVHVLVD-NNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 615
>gi|290977130|ref|XP_002671291.1| predicted protein [Naegleria gruberi]
gi|284084859|gb|EFC38547.1| predicted protein [Naegleria gruberi]
Length = 666
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 32/120 (26%)
Query: 9 VSDRYIEVFKVRRQEMDW----------KLQHTGIVE-------GKKDDIAQFFDGLEII 51
+ RYIE+FK +EM+ L ++ I++ +D+I FF GL I
Sbjct: 229 LGSRYIEIFKSTIEEMEHSRRVLERNLKNLNNSKILKMRNVPFSATEDEIETFFSGLTIA 288
Query: 52 S---------------NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ + V +P NG+ TGE +V+F + A +++KE+I +RYI
Sbjct: 289 TVQSRNQAEQSNETRRRKVYFVLNPMNGKRTGEVFVEFTCHDQMLQAAKRNKEKIRNRYI 348
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 37 KKDDIAQFFDGLEIISNGITLV--EDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++++IA+ F+GL + GI L+ ED + TGEA+V+FV++E+ AL+++ I
Sbjct: 406 EENEIAELFNGLSLSEAGIHLIFGEDECS---TGEAFVEFVNEESFAKALEQNDTTI 459
>gi|26325168|dbj|BAC26338.1| unnamed protein product [Mus musculus]
Length = 841
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 284 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 342
Query: 95 YI 96
+I
Sbjct: 343 FI 344
>gi|344246677|gb|EGW02781.1| RNA-binding protein 12 [Cricetulus griseus]
Length = 997
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>gi|432909266|ref|XP_004078148.1| PREDICTED: RNA-binding protein 12B-like [Oryzias latipes]
Length = 631
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ I +FF GLE +N I L+++ G+ G+A+V+FV +E A AL+K+ E IG RY+
Sbjct: 145 ENQICEFFKGLE--TNEIVLLKN-HRGQNNGKAFVRFVTREDAMEALKKNMEYIGTRYV 200
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E+D + + G VE ++DI +F + N IT++ D G P G YV+FVD+E
Sbjct: 78 QEEIDARSVYVGNVEYTSTQEDILAYFQSCGTV-NRITILNDKTTGHPKGCCYVEFVDRE 136
Query: 79 TAELALQKHKERIGHRYIFFTGHR 102
+ + AL + +R I T R
Sbjct: 137 SVQNALVLNDTTFNNRQIKVTAKR 160
>gi|348520489|ref|XP_003447760.1| PREDICTED: hypothetical protein LOC100697955 [Oreochromis
niloticus]
Length = 1432
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E K I +FF L+I+ + I + P NGR TGE +++F ++ + AL H + +G R
Sbjct: 446 EADKKQIKEFFKNLDIVEDSIYIAYGP-NGRATGEGFLEFKSEQDYKGALGAHMQYMGSR 504
Query: 95 YI 96
+I
Sbjct: 505 FI 506
>gi|340386110|ref|XP_003391551.1| PREDICTED: epithelial splicing regulatory protein 1-like, partial
[Amphimedon queenslandica]
Length = 541
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DIA F GL II G+ +P GR TGEA V ++ A+ ALQ+ + + RY+
Sbjct: 186 NDIALFLSGLNIIPGGVVFSINPV-GRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYV 242
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISN---GITLVEDPFNGRPTGEAY 71
+VF VR Q + ++ + DI +FF +SN GI +V P +G+ +G+A+
Sbjct: 264 KVFTVRMQGLPYR--------ATESDIMEFFQPEAPVSNEADGILIVRYP-DGKASGDAF 314
Query: 72 VQFVDKETAELALQKHKERIGHRYI 96
F + E AL+KH+ + RYI
Sbjct: 315 AVFSSEAHVEEALKKHRNNLMGRYI 339
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 35 EGKKDDIAQFFDGL--EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERI 91
E +D+ FF L I GI +V + RPTG+ +VQ + A A + H++ I
Sbjct: 409 EATPEDVISFFGDLNRSIEQQGIHMVLNA-QSRPTGDCFVQMTSVDAATRAANELHRQNI 467
Query: 92 GHRYI 96
G RYI
Sbjct: 468 GRRYI 472
>gi|119574671|gb|EAW54286.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_e
[Homo sapiens]
Length = 177
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 39 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 94
>gi|193786713|dbj|BAG52036.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 76 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEVDYKAALCRHKQYMGNR 134
Query: 95 YI 96
+I
Sbjct: 135 FI 136
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 193 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 251
>gi|5911913|emb|CAB55897.1| hypothetical protein [Homo sapiens]
gi|7739441|gb|AAF68848.1| hnRNP 2H9C [Homo sapiens]
gi|119574666|gb|EAW54281.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574669|gb|EAW54284.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574672|gb|EAW54287.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574673|gb|EAW54288.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|193787147|dbj|BAG52353.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 77 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 132
>gi|39644691|gb|AAH04511.2| HNRPH3 protein, partial [Homo sapiens]
Length = 207
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 69 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 124
>gi|194379882|dbj|BAG58293.1| unnamed protein product [Homo sapiens]
Length = 238
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 100 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 155
>gi|238013930|gb|ACR38000.1| unknown [Zea mays]
gi|413946698|gb|AFW79347.1| RNA binding protein [Zea mays]
Length = 295
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F E AL ++++ +G RY+
Sbjct: 102 DICKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYV 154
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 201 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELTEENVHIAIRS-DGKATGE 249
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 250 AFVEFPTAEVAKTAMCKDKMTIGTRYV 276
>gi|238006754|gb|ACR34412.1| unknown [Zea mays]
Length = 251
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF GL+I+ LV NGR TGEA+V F AE AL + ++ +G RY+
Sbjct: 59 DVCKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYV 111
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 157 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELAEENVHIAYRS-DGKATGE 205
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 206 AFVEFPTAEVAKTAMCKDKMTIGTRYV 232
>gi|334311305|ref|XP_001381494.2| PREDICTED: RNA-binding protein 12 [Monodelphis domestica]
Length = 1413
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRSESDYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 817 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVK 875
Query: 98 FTGHRYTVQHRAPRCE 113
H T + C+
Sbjct: 876 LMAHCVTSVQLSISCD 891
>gi|349605437|gb|AEQ00674.1| Heteroproteinous nuclear ribonucleoprotein H3-like protein, partial
[Equus caballus]
Length = 200
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 62 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 117
>gi|321446634|gb|EFX60905.1| hypothetical protein DAPPUDRAFT_122743 [Daphnia pulex]
Length = 169
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL-QKHKERIGHRYI 96
DI QFF G ++ + +GRP+GEA V F ++ AE A+ +K+++ IG RYI
Sbjct: 106 SDILQFFSGFSELTPDCIQIHRNNDGRPSGEAVVNFPNRAEAERAIAEKNRQNIGTRYI 164
>gi|395505306|ref|XP_003756983.1| PREDICTED: RNA-binding protein 12 [Sarcophilus harrisii]
Length = 1415
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRSESDYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER-IGHRYIF 97
D+I FF G ++I + L + G PTGEA V F ++ A A+ +R IG R +
Sbjct: 817 DEILDFFYGYQVIPGSVCLKYNE-KGMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVK 875
Query: 98 FTGHRYTVQHRAPRCE 113
H T + C+
Sbjct: 876 LMAHCVTSVQLSISCD 891
>gi|226501122|ref|NP_001148833.1| RNA binding protein [Zea mays]
gi|195622468|gb|ACG33064.1| RNA binding protein [Zea mays]
Length = 268
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F E AL ++++ +G RY+
Sbjct: 102 DICKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYV 154
>gi|413946699|gb|AFW79348.1| hypothetical protein ZEAMMB73_203104 [Zea mays]
Length = 242
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F E AL ++++ +G RY+
Sbjct: 49 DICKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYV 101
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 148 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELTEENVHIAIRS-DGKATGE 196
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ A+ K K IG RY+
Sbjct: 197 AFVEFPTAEVAKTAMCKDKMTIGTRYV 223
>gi|239052941|ref|NP_001131830.2| uncharacterized protein LOC100193205 [Zea mays]
gi|223943183|gb|ACN25675.1| unknown [Zea mays]
gi|238908614|gb|ACF80415.2| unknown [Zea mays]
Length = 241
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F E AL ++++ +G RY+
Sbjct: 48 DICKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYV 100
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 147 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELTEENVHIAISS-DGKATGE 195
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ + K K IG RY+
Sbjct: 196 AFVEFPTTEVAKTVMCKDKMTIGTRYV 222
>gi|170057361|ref|XP_001864450.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167876772|gb|EDS40155.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 1174
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
+I +FF G I SNGI ++ DP NG+ TG AYV+F+ K+ A+ ++ + +
Sbjct: 365 EIRRFFSGQAISSNGIKMINDP-NGKRTGVAYVRFLRKDAKRYAMSRNGQNM 415
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ + F D + ++ + FNGR +GE V+F + A +L K+ IG+R
Sbjct: 843 REETVQTFLDREGFTPKKLQIIRNAFNGRSSGECLVEFESVQEAGDSLIKNAAVIGNRKA 902
Query: 97 FF 98
FF
Sbjct: 903 FF 904
>gi|410562529|pdb|2LXU|A Chain A, Solution Nmr Structure Of The Eukaryotic Rna Recognition
Motif, Rrm1, From The Heterogeneous Nuclear
Ribonucleoprotein H From Homo Sapiens, Northeast
Structural Genomics Consortium (Nesg) Target Hr8614a
Length = 108
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 22 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 80
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG 32
RY+EVFK EMDW L+HTG
Sbjct: 78 RYVEVFKSNNVEMDWVLKHTG 98
>gi|24646109|ref|NP_731640.1| glorund, isoform C [Drosophila melanogaster]
gi|23171055|gb|AAN13533.1| glorund, isoform C [Drosophila melanogaster]
Length = 179
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 19 VRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVD 76
VR + + W H I++ F + + + S GI LV +G+ TGEAYV+
Sbjct: 51 VRLRGLPWSATHKEILD--------FLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
Query: 77 KETAELALQKHKERIGHRYI 96
+E E A + +K +GHRYI
Sbjct: 103 QEDVEEARKLNKASMGHRYI 122
>gi|159164063|pdb|2DB1|A Chain A, Solution Structure Of The Rna Binding Domain In
Heterogeneous Nuclear Ribonucleoprotein F Homolog
Length = 118
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAPRCET 114
GR +GEA+V+ ++ +LAL+K +E +GHRYI F HR + ++H P +
Sbjct: 58 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSAS 113
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG 32
RYIEVFK R EMDW L+H+G
Sbjct: 88 RYIEVFKSHRTEMDWVLKHSG 108
>gi|260797907|ref|XP_002593942.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
gi|229279174|gb|EEN49953.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
Length = 678
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I F GLEI S+GI + DPF G TG+A+V+F A++ +KE + R+I
Sbjct: 165 EIHSLFSGLEIASDGIVIEMDPF-GNKTGKAFVKFKSVRDCSAAVRTYKEYLAARHI 220
>gi|223944441|gb|ACN26304.1| unknown [Zea mays]
Length = 284
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR TGEA+V F E AL ++++ +G RY+
Sbjct: 91 DICKFFVGLDIVD--CLLVNK--NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYV 143
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 10 SDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGE 69
S Y EV K+R L ++ E DI +FF E+ + + +G+ TGE
Sbjct: 190 SMEYTEVLKLR------GLPYSATTE----DIIKFFLEYELTEENVHIAISS-DGKATGE 238
Query: 70 AYVQFVDKETAELALQKHKERIGHRYI 96
A+V+F E A+ + K K IG RY+
Sbjct: 239 AFVEFPTTEVAKTVMCKDKMTIGTRYV 265
>gi|449486103|ref|XP_004175453.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Taeniopygia
guttata]
Length = 1411
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ GE +V+F ++ + AL HK+ IG+R
Sbjct: 440 ESENKHVIDFFKKLDIVEDSIYIAYGP-NGKAIGEGFVEFRNEADYKAALCHHKQYIGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K +I QF +GL + N + ++ D NG+ G+A VQF ++ A A + H++++ R
Sbjct: 557 KIEILQFLEGLAVEENSVQILVDN-NGQGLGQALVQFKAEDDAHKAERLHRKKLNGR 612
>gi|428185861|gb|EKX54712.1| hypothetical protein GUITHDRAFT_57099, partial [Guillardia theta
CCMP2712]
Length = 203
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++DI +FF GL + +GI +GRPTGEA+V F + E AL ++ +G RY+
Sbjct: 12 REEDIREFFSGLLVRPHGIFFTSSR-DGRPTGEAFVIFERDDEGEKALSLDRKHMGTRYV 70
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+ D+ FF + +G+ L+++ G +G+AYV+ +E AL H+ GHRY
Sbjct: 134 AKEADVFDFFCSSNVRPSGVNLIQNA-RGESSGDAYVELGSEEEVMRALALHRSNFGHRY 192
Query: 96 I 96
+
Sbjct: 193 L 193
>gi|149052455|gb|EDM04272.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Rattus
norvegicus]
Length = 96
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>gi|357143317|ref|XP_003572878.1| PREDICTED: G-rich sequence factor 1-like isoform 1 [Brachypodium
distachyon]
Length = 292
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR +GEA+V F AE AL ++++ +G RY+
Sbjct: 100 DIIKFFVGLDIVD--CLLVHK--NGRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYV 152
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYV 72
Y EV K+R L ++ +E DI +FF E+ + + + +G+ TGEA+V
Sbjct: 201 YTEVLKLR------GLPYSATIE----DIIKFFVEYELTEDNVHIAYRS-DGKATGEAFV 249
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+F E A+ A+ K K IG RY+
Sbjct: 250 EFPTAEVAKTAMCKDKMTIGTRYV 273
>gi|224002324|ref|XP_002290834.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974256|gb|EED92586.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 387
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 30 HTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAEL 82
HTG V + K DI FF I + + L +GR TGE YV F D + A+
Sbjct: 295 HTGYVRLRGLPFQASKQDILDFFQEYNPIESSVLLTYRG-DGRSTGEGYVAFKDADDAKE 353
Query: 83 ALQKHKERIGHRYI 96
A+ H+ IG RYI
Sbjct: 354 AMALHRSTIGSRYI 367
>gi|149052457|gb|EDM04274.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Rattus
norvegicus]
Length = 134
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 17/54 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGL 48
RY+EVFK EMDW L+HTG + G K++I QFF G+
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGM 134
>gi|395510177|ref|XP_003759357.1| PREDICTED: epithelial splicing regulatory protein 2, partial
[Sarcophilus harrisii]
Length = 470
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA V+FVD E +LAL++HK +G RYI
Sbjct: 12 GRRNGEALVRFVDSEQRDLALERHKHHMGARYI 44
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 36/114 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFD----------GLEIISN-------- 53
RYIEV+K +E I G ++AQF GL +
Sbjct: 42 RYIEVYKASGEEF------LKIAGGTSHEVAQFLSREDQVIIRMRGLPFTATPADVLAFL 95
Query: 54 -----------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V P +GRPTG+A+ F +E A+ AL+KHK +G RYI
Sbjct: 96 GPECPVTGGHEGLLFVRYP-DGRPTGDAFALFACEELAQSALRKHKGILGKRYI 148
>gi|299472433|emb|CBN77621.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 305
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 24 MDWKLQHTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
M + HTG++ K D+ FF G+ + + I V +GR TGEA+V F
Sbjct: 210 MAMPVVHTGVIRMRGLPFSATKQDVLNFFQGMPVTEDTIQFVVRG-DGRVTGEAFVSFSS 268
Query: 77 KETAELALQKHKERIGHRYI 96
+E A+ ++ +G RY+
Sbjct: 269 PAESEAAMSRNGNHMGTRYV 288
>gi|357143320|ref|XP_003572879.1| PREDICTED: G-rich sequence factor 1-like isoform 2 [Brachypodium
distachyon]
Length = 274
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ LV NGR +GEA+V F AE AL ++++ +G RY+
Sbjct: 82 DIIKFFVGLDIVD--CLLVHK--NGRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYV 134
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYV 72
Y EV K+R L ++ +E DI +FF E+ + + + +G+ TGEA+V
Sbjct: 183 YTEVLKLR------GLPYSATIE----DIIKFFVEYELTEDNVHIAYRS-DGKATGEAFV 231
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+F E A+ A+ K K IG RY+
Sbjct: 232 EFPTAEVAKTAMCKDKMTIGTRYV 255
>gi|71121745|gb|AAH99792.1| Hnrph1 protein [Rattus norvegicus]
Length = 184
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 17/54 (31%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGL 48
RY+EVFK EMDW L+HTG + G K++I QFF G+
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGI 134
>gi|357517683|ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355523152|gb|AET03606.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 290
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV +GR +GEA+V F E ALQ+ ++ +G RY+
Sbjct: 99 DILKFFAGLTIVD--VLLVNK--SGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 151
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I FF ++I + + P +G+ TGEAYV+FV + A+ A+ K K IG RY+
Sbjct: 214 KSQIIDFFKDYKLIEGRVHIACRP-DGKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYV 271
>gi|407393563|gb|EKF26660.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi marinkellei]
Length = 454
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ IA+FF G++I G+ +V + N RPTGEA+V+ + AL+++ +G+RYI
Sbjct: 358 EESIAEFFAGVKIPPQGVHMVYNEQN-RPTGEAFVELENDSDLVAALERNGGAMGNRYI 415
>gi|407866924|gb|EKG08457.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ IA+FF G++I G+ +V + N RPTGEA+V+ + AL+++ +G+RYI
Sbjct: 354 EESIAEFFAGVKIPPQGVHMVYNEQN-RPTGEAFVELENDSDLVAALERNGGAMGNRYI 411
>gi|322778928|gb|EFZ09344.1| hypothetical protein SINV_16613 [Solenopsis invicta]
Length = 565
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 43 QFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
Q DG +G+ V+ P +GR TG+A+V F +E A AL KH++ IG RYI
Sbjct: 106 QVLDG----EDGVLFVKKP-DGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYI 154
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ L P GR GEA V+F++KE ++AL++HK +G RYI
Sbjct: 6 GVALCLSPM-GRRNGEALVRFINKEHRDMALKRHKHHMGTRYI 47
>gi|71425877|ref|XP_813187.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878047|gb|EAN91336.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 448
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ IA+FF G++I G+ +V + N RPTGEA+V+ + AL+++ +G+RYI
Sbjct: 352 EESIAEFFAGVKIPPQGVHMVYNEQN-RPTGEAFVELENDSDLVAALERNGGAMGNRYI 409
>gi|71649626|ref|XP_813529.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878421|gb|EAN91678.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ IA+FF G++I G+ +V + N RPTGEA+V+ + AL+++ +G+RYI
Sbjct: 354 EESIAEFFAGVKIPPQGVHMVYNEQN-RPTGEAFVELENDSDLVAALERNGGAMGNRYI 411
>gi|326512460|dbj|BAJ99585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E +D+I +FF+GL + + +E P NGR E +V F D AL+K +++IG R
Sbjct: 254 ETTEDEIREFFEGLSVGKISMHSLEIP-NGRTVTEVFVTFNDPADVNAALEKDRQKIGSR 312
Query: 95 YI 96
++
Sbjct: 313 WV 314
>gi|46195836|ref|NP_996869.1| RNA-binding protein 12 [Gallus gallus]
gi|37932175|gb|AAP69823.1| SWAN ribonucleoprotein [Gallus gallus]
Length = 887
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ GE +V+F ++ + AL HK+ IG+R
Sbjct: 441 ESENKHVIDFFKKLDIVEDSIYIAYGP-NGKAIGEGFVEFRNEADYKAALCHHKQYIGNR 499
Query: 95 YI 96
+I
Sbjct: 500 FI 501
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K +I QF +GL + N + ++ D NG+ G+A VQF ++ A A + H++++ R
Sbjct: 558 KMEILQFLEGLAVEENSVQILVDN-NGQGLGQALVQFKAEDDARKAERLHRKKLNGR 613
>gi|343470599|emb|CCD16749.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 473
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++ IA+FF G+ I + G+ +V + N R TGEA+V+ K+ LAL+K+ +G RYI
Sbjct: 385 EEAIAEFFSGVRIPTQGVHMVYNEQN-RLTGEAFVEVESKDDVLLALRKNGGMMGTRYI 442
>gi|157109923|ref|XP_001650880.1| heterogeneous nuclear ribonucleoprotein (hnrnp) [Aedes aegypti]
gi|108878855|gb|EAT43080.1| AAEL005441-PA, partial [Aedes aegypti]
Length = 948
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DD+ +FF G I SNGI ++ D NGR TG A ++F+ K+ AL + R+ H +
Sbjct: 318 DDVRRFFHGQTISSNGIKMINDK-NGRRTGVAMIRFLRKDGKRYALSRDGMRLRHSVV 374
>gi|363741413|ref|XP_003642489.1| PREDICTED: RNA-binding protein 12-like [Gallus gallus]
Length = 880
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ GE +V+F ++ + AL HK+ IG+R
Sbjct: 441 ESENKHVIDFFKKLDIVEDSIYIAYGP-NGKAIGEGFVEFRNEADYKAALCHHKQYIGNR 499
Query: 95 YI 96
+I
Sbjct: 500 FI 501
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K +I QF +GL + N + ++ D NG+ G+A VQF ++ A A + H++++ R
Sbjct: 558 KMEILQFLEGLAVEENSVQILVDN-NGQGLGQALVQFKAEDDARKAERLHRKKLNGR 613
>gi|440797920|gb|ELR18994.1| fibronectin type III domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 740
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
E +DIA+FF L+I G+++ + F+GRPTG+ +V F + A LALQ+
Sbjct: 690 EVTPEDIARFFATLDIAPEGVSIALN-FDGRPTGDGFVCFASADHATLALQR 740
>gi|449265752|gb|EMC76898.1| RNA-binding protein 12, partial [Columba livia]
Length = 853
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ GE +V+F ++ + AL HK+ IG+R
Sbjct: 426 ESENKHVIDFFKKLDIVEDSIYIAYGP-NGKAIGEGFVEFRNEADYKAALCHHKQYIGNR 484
Query: 95 YI 96
+I
Sbjct: 485 FI 486
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K +I QF +GL + N + ++ D NG+ G+A VQF ++ A A + H++++ R
Sbjct: 543 KMEILQFLEGLAVEENSVQILVDN-NGQGLGQALVQFKAEDDARKAERLHRKKLNGR 598
>gi|51467948|ref|NP_001003856.1| RNA-binding protein 12 [Danio rerio]
gi|31324618|gb|AAP48571.1| swan [Danio rerio]
gi|190336635|gb|AAI62473.1| RNA binding motif protein 12 [Danio rerio]
gi|190337822|gb|AAI62102.1| RNA binding motif protein 12 [Danio rerio]
Length = 876
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + I +FF L+I+ + I + P NGR TGE +V+F ++ + AL H + +G R
Sbjct: 434 EAENKQIFEFFKNLDIVEDSIYIAYGP-NGRATGEGFVEFRNEMDYKAALGCHMQYMGSR 492
Query: 95 YI 96
+I
Sbjct: 493 FI 494
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ F DG+E+ + ++ D NG G+A VQF E A A + H++++ R F
Sbjct: 547 KKDVRLFLDGIELFEESLKVLVDS-NGNGLGQAIVQFKSDEDALKAERLHRQKLNGRDAF 605
>gi|24653910|ref|NP_725483.1| fusilli, isoform B [Drosophila melanogaster]
gi|21645398|gb|AAM70984.1| fusilli, isoform B [Drosophila melanogaster]
gi|27820059|gb|AAO25059.1| GH20047p [Drosophila melanogaster]
gi|71834259|gb|AAZ41802.1| GH11127p [Drosophila melanogaster]
gi|220947106|gb|ACL86096.1| fus-PB [synthetic construct]
Length = 633
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 80 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 123
>gi|339253438|ref|XP_003371942.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316967723|gb|EFV52113.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 505
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 41 IAQFFD----GLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
I +FF+ G+++ +GI V +GR TG+A+V +E A+ AL KHKE IG R
Sbjct: 66 IMEFFESGENGVKVAGGESGIMFVNKA-DGRATGDAFVLIASEEDAQKALSKHKEVIGSR 124
Query: 95 YI 96
YI
Sbjct: 125 YI 126
>gi|401410426|ref|XP_003884661.1| GL11864, related [Neospora caninum Liverpool]
gi|325119079|emb|CBZ54631.1| GL11864, related [Neospora caninum Liverpool]
Length = 503
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ-KHKERIGHRYI 96
I QFF+G + + I P +GRP+GEAYVQFVD A A Q K+ R+ R I
Sbjct: 420 IVQFFNGFHMAA--ILPSTIPIDGRPSGEAYVQFVDAAEAFRAFQAKNGARMDKRMI 474
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F VR + + W +Q ++++ FF + + N L+ F+ R TGEAYVQ D
Sbjct: 53 FVVRLRGLPWDVQ--------EENVVAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPD 104
Query: 77 KETAELALQK-HKERIGHRYI 96
E A++ H +G R+I
Sbjct: 105 PGLREQAIKDLHGRLLGTRWI 125
>gi|328707990|ref|XP_001948909.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 571
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 40 DIAQFFDGLEIISN------GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
D+ FF+ E S+ G+ V+ P +GR TG A+V F D++ A AL KH++ +G
Sbjct: 104 DVITFFENGEQTSSVMYGEEGVLFVKKP-DGRATGYAFVLFADEDDACKALSKHRDLMGT 162
Query: 94 RYI 96
RYI
Sbjct: 163 RYI 165
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 50 IISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I G+TL +GR GEA V+FV++E ++A ++H IG RYI
Sbjct: 13 ICVGGVTLCLSA-HGRCNGEAVVRFVNQEHRDMATKRHNHHIGSRYI 58
>gi|222615465|gb|EEE51597.1| hypothetical protein OsJ_32850 [Oryza sativa Japonica Group]
Length = 340
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
DI +FF GL+I+ LV NGR TGEA+V F AE AL ++++ +G R+
Sbjct: 237 DIFKFFVGLDIVD--CLLVHK--NGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRW 288
>gi|291232395|ref|XP_002736145.1| PREDICTED: RNA binding motif protein 12-like [Saccoglossus
kowalevskii]
Length = 983
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++I +FF GLEI +GI + D F G+ TG+ +V+F ++ + AL++ + +G RYI
Sbjct: 483 ENIKKFFAGLEIDRDGIRISTDSF-GKRTGDGFVKFRNQMDHQEALKRSMKYMGTRYI 539
>gi|428170681|gb|EKX39604.1| hypothetical protein GUITHDRAFT_54250, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF G I+ +GI V GRP GEA+V F + AL + ++ + RY+
Sbjct: 15 DIEEFFKGCAILKDGINFVL-SHGGRPAGEAFVTFETENDCRRALMRDRDLMNKRYV 70
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF L I +GI + + R GEA+V+F D+ + A++K ++ IG RY+
Sbjct: 121 DDIRSFFGHLSIKEDGIIICLNR-ERRNNGEAFVEFTDEYVVDEAVKKDRQMIGSRYV 177
>gi|301606650|ref|XP_002932936.1| PREDICTED: RNA-binding protein 12 [Xenopus (Silurana) tropicalis]
Length = 880
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + NG+ TGE +++F ++E + AL +HK+ +G+R
Sbjct: 443 EAENKHVIDFFKKLDIVEDSIYIAYGS-NGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 501
Query: 95 YI 96
++
Sbjct: 502 FV 503
>gi|112491340|pdb|2HGL|A Chain A, Nmr Structure Of The First Qrrm Domain Of Human Hnrnp F
gi|297787485|pdb|2KFY|A Chain A, Nmr Structure Of The First Qrrm Of Hnrnp F In Complex With
Agggau G- Tract Rna
Length = 136
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHR----YTVQHRAP 110
GR +GEA+V+ ++ ++AL+K +E +GHRYI F HR + ++H P
Sbjct: 85 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP 136
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG 32
RYIEVFK R EMDW L+H+G
Sbjct: 115 RYIEVFKSHRTEMDWVLKHSG 135
>gi|386768028|ref|NP_001246347.1| fusilli, isoform H [Drosophila melanogaster]
gi|383302505|gb|AFH08101.1| fusilli, isoform H [Drosophila melanogaster]
Length = 526
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 80 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 123
>gi|388513407|gb|AFK44765.1| unknown [Medicago truncatula]
Length = 158
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I FF ++I + + P +G+ TGEAYV+FV + A+ A+ K K IG RY+
Sbjct: 82 KSQIIDFFKDYKLIEGRVHIACRP-DGKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYV 139
>gi|24653903|ref|NP_725480.1| fusilli, isoform A [Drosophila melanogaster]
gi|7303049|gb|AAF58117.1| fusilli, isoform A [Drosophila melanogaster]
Length = 557
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V+ P +GR TG+A+V F ++ A AL +H+E IG RYI
Sbjct: 80 NEGVLFVKKP-DGRATGDAFVLFANETDAPKALGRHRESIGQRYI 123
>gi|226487868|emb|CAX75599.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNG--RPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DI +F L+ ++ + FN RPTGEA V F + A+ A++K +E+IG RY
Sbjct: 133 KEDIDRFLAPLQPVN-----IRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRY 187
Query: 96 I 96
I
Sbjct: 188 I 188
>gi|226487878|emb|CAX75604.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNG--RPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DI +F L+ ++ + FN RPTGEA V F + A+ A++K +E+IG RY
Sbjct: 133 KEDIDRFLAPLQPVN-----IRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRY 187
Query: 96 I 96
I
Sbjct: 188 I 188
>gi|327271497|ref|XP_003220524.1| PREDICTED: RNA-binding protein 12-like [Anolis carolinensis]
Length = 1418
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ GE +V+F ++ + AL HK+ IG+R
Sbjct: 437 ESENKHVIDFFKKLDIVEDSIYIAYGP-NGKALGEGFVEFRNEADYKAALCHHKQYIGNR 495
Query: 95 YI 96
+I
Sbjct: 496 FI 497
>gi|76155975|gb|AAX27224.2| SJCHGC06533 protein [Schistosoma japonicum]
Length = 249
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNG--RPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K+DI +F L+ ++ + FN RPTGEA V F + A+ A++K +E+IG RY
Sbjct: 90 KEDIDRFLAPLQPVN-----IRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRY 144
Query: 96 I 96
I
Sbjct: 145 I 145
>gi|226487872|emb|CAX75601.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma
japonicum]
Length = 153
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + P NGR GEA+++ K+ E A+ H E +G RYI
Sbjct: 17 DDIINFFKDCTIRGGKRGIYFPQGP-NGRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYI 75
>gi|302782846|ref|XP_002973196.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
gi|300158949|gb|EFJ25570.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
Length = 289
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 29 QHTGIVE-------GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE 81
+HTG+++ K DI +FF + + + +V +GR TGEAYV F+ ++
Sbjct: 198 EHTGVLKLRGLPFSASKRDIVEFFREFGLKEDSVQIVVHS-DGRATGEAYVFFLGPGDSK 256
Query: 82 LALQKHKERIGHRYI 96
A+ K K +G+RY+
Sbjct: 257 AAMNKDKMTLGNRYV 271
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ D+ +FF GL+++ + LV GR +GEA+V + ALQ++++ +G RY+
Sbjct: 78 ESDVFEFFAGLDVVD--VLLVRK--QGRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYV 132
>gi|156401535|ref|XP_001639346.1| predicted protein [Nematostella vectensis]
gi|156226474|gb|EDO47283.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVE---DPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
E K D+ +FF+GL+I S I L++ G+ TG A+V F A AL+ + I
Sbjct: 26 ESSKRDLYKFFNGLKIAS--IDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYI 83
Query: 92 GHRYI 96
GHRYI
Sbjct: 84 GHRYI 88
>gi|302789778|ref|XP_002976657.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
gi|300155695|gb|EFJ22326.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
Length = 287
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 29 QHTGIVE-------GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE 81
+HTG+++ K DI +FF + + + +V +GR TGEAYV F+ ++
Sbjct: 196 EHTGVLKLRGLPFSASKRDIVEFFREFGLKEDSVQIVVHS-DGRATGEAYVFFLGPGDSK 254
Query: 82 LALQKHKERIGHRYI 96
A+ K K +G+RY+
Sbjct: 255 AAMNKDKMTLGNRYV 269
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ D+ +FF GL+++ + LV GR +GEA+V + ALQ++++ +G RY+
Sbjct: 78 ESDVFEFFAGLDVVD--VLLVRK--QGRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYV 132
>gi|388499278|gb|AFK37705.1| unknown [Medicago truncatula]
Length = 94
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I FF ++I + + P +G+ TGEAYV+FV + A+ A+ K K IG RY+
Sbjct: 18 KSQIIDFFKDYKLIEGRVHIACRP-DGKVTGEAYVEFVSPDEAKRAMFKDKMTIGSRYV 75
>gi|219111791|ref|XP_002177647.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410532|gb|EEC50461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 29 QHTGIV-------EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE 81
+HTG + +DDI +FF G + L +GR TGEAY+ F + ++
Sbjct: 152 EHTGFLRVRGLPFSATRDDIFKFFLGYNPTQESVVLTYRN-DGRATGEAYIGFATADDSK 210
Query: 82 LALQKHKERIGHRYI 96
A++ H+ +G RY+
Sbjct: 211 RAMELHRRVMGSRYV 225
>gi|147907062|ref|NP_001079993.1| RNA binding motif protein 12 [Xenopus laevis]
gi|37589430|gb|AAH59291.1| Rbm12-prov protein [Xenopus laevis]
Length = 877
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L I+ + I + NG+ TGE +++F ++E + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLNIVEDSIYIAYGS-NGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 95 YI 96
++
Sbjct: 499 FV 500
>gi|56753603|gb|AAW25004.1| SJCHGC02919 protein [Schistosoma japonicum]
gi|226487876|emb|CAX75603.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma
japonicum]
Length = 137
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 DDIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DDI FF I GI + P NGR GEA+++ K+ E A+ H E +G RYI
Sbjct: 17 DDIINFFKDCTIRGGKRGIYFPQGP-NGRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYI 75
>gi|37932182|gb|AAP69824.1| SWAN ribonucleoprotein [Xenopus laevis]
Length = 877
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L I+ + I + NG+ TGE +++F ++E + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLNIVEDSIYIAYGS-NGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 95 YI 96
++
Sbjct: 499 FV 500
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 38 KDDIAQFF--DGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+ DI+ FF +G I N + L+ D NG+ G+A VQF ++ A + + H++++ R
Sbjct: 558 RKDISHFFISEGFAIDENAVQLLTDN-NGQCIGQALVQFRSEDDARKSERLHRKKLNGRD 616
Query: 96 IFF 98
+F
Sbjct: 617 VFL 619
>gi|221507828|gb|EEE33415.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 510
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ-KHKERIGHRYI 96
I QFF G + + I P +GRP+GEAYVQFVD A A Q K+ R+ R I
Sbjct: 427 IVQFFHGFHMAA--ILPSTIPIDGRPSGEAYVQFVDAAEALRAFQAKNGGRMDKRMI 481
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F VR + + W +Q ++++ FF + + N L+ F+ R TGEAYVQ D
Sbjct: 52 FVVRLRGLPWDVQ--------EENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPD 103
Query: 77 KETAELALQK-HKERIGHRYI 96
E A++ H +G R+I
Sbjct: 104 PGLREQAIKDLHGRLLGTRWI 124
>gi|221483341|gb|EEE21660.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 508
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ-KHKERIGHRYI 96
I QFF G + + I P +GRP+GEAYVQFVD A A Q K+ R+ R I
Sbjct: 425 IVQFFHGFHMAA--ILPSTIPIDGRPSGEAYVQFVDAAEALRAFQAKNGGRMDKRMI 479
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F VR + + W +Q ++++ FF + + N L+ F+ R TGEAYVQ D
Sbjct: 52 FVVRLRGLPWDVQ--------EENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPD 103
Query: 77 KETAELALQK-HKERIGHRYI 96
E A++ H +G R+I
Sbjct: 104 PGLREQAIKDLHGRLLGTRWI 124
>gi|237839439|ref|XP_002369017.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211966681|gb|EEB01877.1| RRM domain-containing protein [Toxoplasma gondii ME49]
Length = 513
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ-KHKERIGHRYI 96
I QFF G + + I P +GRP+GEAYVQFVD A A Q K+ R+ R I
Sbjct: 430 IVQFFHGFHMAA--ILPSTIPIDGRPSGEAYVQFVDAAEALRAFQAKNGGRMDKRMI 484
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 17 FKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
F VR + + W +Q ++++ FF + + N L+ F+ R TGEAYVQ D
Sbjct: 52 FVVRLRGLPWDVQ--------EENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPD 103
Query: 77 KETAELALQK-HKERIGHRYI 96
E A++ H +G R+I
Sbjct: 104 PGLREQAIKDLHGRLLGTRWI 124
>gi|324501689|gb|ADY40749.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 152
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+++I FF + ITL ++ + RP+GEA+V F + E E AL + K+ +G RYI
Sbjct: 68 EEEIRIFFQPADRSIVKITLTKNR-DARPSGEAFVAFNNNEDYEYALTRDKQHMGKRYIE 126
Query: 97 FFTGHRYTVQHRA--PRCETSIPV 118
+ G + H A P + IP+
Sbjct: 127 VWIGLTFVFAHHAFNPNLKFMIPL 150
>gi|452836673|gb|EME38616.1| hypothetical protein DOTSEDRAFT_75395 [Dothistroma septosporum
NZE10]
Length = 249
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
+K DI Q FD I I + DPF GR +V F D ETAE A+
Sbjct: 17 AQKHDIEQLFDHNNITIKKIDMSIDPFTGRNPSYCFVDFYDHETAERAM 65
>gi|301609832|ref|XP_002934459.1| PREDICTED: RNA-binding protein 12B-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 683
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF G ++ ++ + NG G AYV+F + A+ AL + E IGHRYI
Sbjct: 196 DVKEFFHGFNVVDLHFSVRQ---NGVRDGNAYVKFGSVQDAQAALSRDNEYIGHRYI 249
>gi|301609834|ref|XP_002934460.1| PREDICTED: RNA-binding protein 12B-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 659
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ +FF G ++ ++ + NG G AYV+F + A+ AL + E IGHRYI
Sbjct: 172 DVKEFFHGFNVVDLHFSVRQ---NGVRDGNAYVKFGSVQDAQAALSRDNEYIGHRYI 225
>gi|410905475|ref|XP_003966217.1| PREDICTED: RNA-binding protein 12B-B-like [Takifugu rubripes]
Length = 627
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ FFDGL I +GI L+++ +G TG V+F + AL++H++ IG RY+
Sbjct: 153 DVSNFFDGLLI--DGIVLLKNG-HGSNTGNGLVKFRSSDDTYEALKRHRQYIGARYV 206
>gi|256071585|ref|XP_002572120.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645121|emb|CCD60182.1| heterogeneous nuclear ribonucleoprotein-related [Schistosoma
mansoni]
Length = 1068
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 43 QFFDGLE--IISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+FF+ ++ I+ N GI LV P + RPTG+A++ F + A AL +HK+ +G RY+
Sbjct: 471 EFFNAVQAPIMFNEQGIYLVVYP-DQRPTGDAFILFCNDHIATKALIRHKDYLGDRYV 527
>gi|390363422|ref|XP_003730367.1| PREDICTED: uncharacterized protein LOC100888204 [Strongylocentrotus
purpuratus]
Length = 1832
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
DIA FF GL+I+ GI ++ + G+PTG +++F D A L ++
Sbjct: 1507 DIAHFFSGLQIVPGGIHIMVN-SEGKPTGHCFIEFADAHNARLTEER 1552
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPF-NGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
K DI FF+GL + + I L DP +G +G AY++F+D + A A QK+ + R
Sbjct: 707 KNSDIVDFFEGLAMRQDSIYL--DPNKDGSGSGIAYLEFIDPDMARRACQKNGRQFNRRT 764
Query: 96 I 96
+
Sbjct: 765 V 765
>gi|125541750|gb|EAY88145.1| hypothetical protein OsI_09580 [Oryza sativa Indica Group]
Length = 226
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL+I+ + D NG T EA+V F AE AL ++++ +G RY+
Sbjct: 37 DICKFFVGLDIVD----CLLDHKNGCFTDEAFVVFPSAMQAEFALHRNRQNMGRRYV 89
>gi|443715937|gb|ELU07669.1| hypothetical protein CAPTEDRAFT_49477, partial [Capitella teleta]
Length = 97
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+ FF+GLEI GI L+ + + TG YV+FV + A+ K+KE +G R+I
Sbjct: 29 VKDFFEGLEIAQRGIHLMHND-RHQCTGIGYVEFVTSADCDKAVAKNKEYMGKRFIL 84
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R E D + + G V+ +++ Q F G + N +T++ D F+G P G AY++F DKE
Sbjct: 5 RAEADARSVYVGNVDYAATAEELEQHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 63
Query: 79 TAELAL 84
+ + A+
Sbjct: 64 SVKTAM 69
>gi|294461682|gb|ADE76400.1| unknown [Picea sitchensis]
Length = 265
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 28 LQHTGIVEGK-------KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
++HTG ++ + + DI +FF ++ + +V +GR TGEA+V+F +
Sbjct: 172 MEHTGFLKLRGLPFSVSRRDIVEFFKDYQLKEKNVHIVTHS-DGRATGEAFVEFSSAADS 230
Query: 81 ELALQKHKERIGHRYI 96
+ A+ K K IG RY+
Sbjct: 231 KDAMSKDKMTIGTRYV 246
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ DI +FF GL+++ LV GR +GE +V F + ALQ+ ++ +G RYI
Sbjct: 75 ESDICEFFAGLDVVD--ALLVHK--QGRFSGEGFVLFRSPMQVDFALQRDRQNMGRRYI 129
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 42 AQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGH 101
A F D EI N IT+ D F GR G AY++F DK + +A++K+ + R I
Sbjct: 109 ALFADCGEI--NAITIPVDKFTGRAKGFAYLEFADKASVLMAMEKNNALLRDRAIKVVNK 166
Query: 102 RYTV 105
R +
Sbjct: 167 RTNL 170
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFT 99
++ Q F G + N +T++ D F+G P G AYV+F DK++ E A+Q R I T
Sbjct: 106 ELEQHFHGCGSV-NRVTILCDKFSGHPKGFAYVEFGDKDSVENAVQLSDSLFKGRQIKVT 164
Query: 100 GHRYTV 105
R V
Sbjct: 165 AKRTNV 170
>gi|422294428|gb|EKU21728.1| rna binding protein, partial [Nannochloropsis gaditana CCMP526]
Length = 572
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI FF G + G+ + D GR +G+AYV F A+ AL+ KE+IG R+I
Sbjct: 234 DILAFFSGFGVAEGGVHMHYDHM-GRASGQAYVVFETVPEAQHALKLDKEKIGERWI 289
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPT 67
++ +R+I++F + EM H A FF + +NGI V +GR +
Sbjct: 283 KIGERWIDLFLSSKPEM----LH-----------AHFFASVGPTANGIFFVHR-MDGRSS 326
Query: 68 GEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
GEA+V +E AL + K+++G R++ F H
Sbjct: 327 GEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESH 361
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNG 64
EV ++ + ++E+D + + G V+ +++ Q F G + N +T++ D F+G
Sbjct: 48 SEVDKNTTQLSEQEKKEIDQRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCDKFSG 106
Query: 65 RPTGEAYVQFVDKETAELAL 84
P G AY++F DK++ E A+
Sbjct: 107 HPKGFAYIEFADKDSVETAM 126
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
N +T++ D ++GRP G AYV+F DKE+A+ +L
Sbjct: 114 NRVTILCDRYSGRPKGFAYVEFADKESAQASL 145
>gi|194747277|ref|XP_001956079.1| GF25026 [Drosophila ananassae]
gi|190623361|gb|EDV38885.1| GF25026 [Drosophila ananassae]
Length = 1037
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFT 99
DI ++F GL I NGI +++ NG TG AYV+F +A+ ALQ++ R I T
Sbjct: 394 DIRKYFQGLYIPHNGIKIMQ--VNGNRTGVAYVEFSRVSSAQKALQRNNTMFRDRQIQIT 451
>gi|158286040|ref|XP_001688002.1| AGAP007221-PA [Anopheles gambiae str. PEST]
gi|157020278|gb|EDO64651.1| AGAP007221-PA [Anopheles gambiae str. PEST]
Length = 1197
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
+I +FF I + GI ++ D NGR TG AY+QF+ KE + AL +
Sbjct: 541 EIRRFFKSHLITTQGIKMINDQ-NGRRTGTAYIQFLRKEGKKFALSR 586
>gi|403372892|gb|EJY86355.1| hypothetical protein OXYTRI_15124 [Oxytricha trifallax]
Length = 635
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRY 95
+ DDI +FF ++ + + + E NG+ TG V F D+ETA+ A + ++++IG+RY
Sbjct: 564 QPDDITRFFKDYQVTKSDVVIEE--INGKKTGFGLVFFKDQETAQQAQENMNRKKIGNRY 621
Query: 96 I 96
+
Sbjct: 622 V 622
>gi|47226618|emb|CAG07777.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 15 EVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYV 72
E+F V+ + + W DD+ +FF I +G+ + N GRP+G A++
Sbjct: 4 ELFIVQVKGLPWSCT--------ADDLLKFFSECRI-RDGVKGIHLTVNRMGRPSGRAFI 54
Query: 73 QFVDKETAELALQKHKERIGHRYI 96
+ +E AL+KH++ +G RY+
Sbjct: 55 EMEHEEDVNKALEKHRQYLGPRYV 78
>gi|118778307|ref|XP_308564.3| AGAP007221-PB [Anopheles gambiae str. PEST]
gi|116132320|gb|EAA04285.4| AGAP007221-PB [Anopheles gambiae str. PEST]
Length = 787
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
+I +FF I + GI ++ D NGR TG AY+QF+ KE + AL +
Sbjct: 375 EIRRFFKSHLITTQGIKMINDQ-NGRRTGTAYIQFLRKEGKKFALSR 420
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRC 112
N +T++ D F G P G AY++F DKE + AL + R I R
Sbjct: 118 NRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDESLFRGRQIKVCAKR---------- 167
Query: 113 ETSIPVSSSTHKPGR 127
T+ P S+T++P R
Sbjct: 168 -TNRPGVSTTNRPPR 181
>gi|350592780|ref|XP_003483535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Sus
scrofa]
Length = 161
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ QFF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 26 LQQFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 78
>gi|308477529|ref|XP_003100978.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
gi|308264322|gb|EFP08275.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
Length = 621
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 37 KKDDIAQFFDGLEIISNGITL--VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K++DI QFFDGLE + I + P RP+GEA+V+F + AE A++ + +G R
Sbjct: 194 KEEDINQFFDGLEPLPAEIVIGGTGGP-RSRPSGEAFVRFATQAAAEAAMEYNNRHMGTR 252
Query: 95 YI 96
YI
Sbjct: 253 YI 254
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+ DI +FF GL + GRP GEAYV+F ++ A A++ ++ + +RYI
Sbjct: 87 EKDIQEFFSGLGVKRVKFVCT----TGRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIE 142
Query: 97 --FFTGHRYTVQHRAPRCETSIPVSSSTHKPGRHHTLDGPNGGG 138
F G + ++I V S T G P+G G
Sbjct: 143 SEFLIGKQEN--------NSNILVFSVTDVEGEFEFRPDPDGNG 178
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRC 112
N +T++ D F G P G AY++F DKE + AL + R I R
Sbjct: 118 NRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDESLFRGRQIKVCAKR---------- 167
Query: 113 ETSIPVSSSTHKPGR 127
T+ P S+T++P R
Sbjct: 168 -TNRPGVSTTNRPPR 181
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
D++ F+ I N +T++ D F+GRP G AY++F DK+ +E AL R +
Sbjct: 137 DELQSHFEACGTI-NRVTILCDKFSGRPKGYAYIEFADKDGSENALALDNSPFKGRNLKV 195
Query: 99 TGHRYTV 105
T R V
Sbjct: 196 TPKRTNV 202
>gi|300122335|emb|CBK22907.2| unnamed protein product [Blastocystis hominis]
Length = 546
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 38 KDDIAQFFDGLEIISNG---ITLVEDPFNG-RPTGEAYVQFVDKETAELALQKHKERIGH 93
K++IA FF LE+ + +T+V N RP+GEA+V F E + L+ H + +G
Sbjct: 447 KEEIAAFFAPLEVPRDAKGELTIVIGQDNKQRPSGEAFVTFSSVEDSAKGLEYHLKNLGK 506
Query: 94 RYI 96
RYI
Sbjct: 507 RYI 509
>gi|308453513|ref|XP_003089469.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
gi|308240262|gb|EFO84214.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
Length = 264
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--- 96
DI +FF GL + GRP GEAYV+F ++ A A++ ++ + +RYI
Sbjct: 89 DIQEFFSGLGVKRVKFVCT----TGRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIESE 144
Query: 97 FFTGHRYTVQHRAPRCETSIPVSSSTHKPGRHHTLDGPNGGG 138
F G + ++I V S T G P+G G
Sbjct: 145 FLIGKQEN--------NSNILVFSVTDVEGEFEFRPDPDGNG 178
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 37 KKDDIAQFFDGLEIISNGITL--VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
K++DI QFFDGLE + I + P RP+GEA+V+F + AE A++ + +G R
Sbjct: 194 KEEDINQFFDGLEPLPAEIVIGGTGGP-RSRPSGEAFVRFATQAAAEAAMEYNNRHMGTR 252
Query: 95 YI 96
++
Sbjct: 253 WV 254
>gi|300120417|emb|CBK19971.2| unnamed protein product [Blastocystis hominis]
Length = 378
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 36 GKKDDIAQFFDGLEIISNG-----ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKER 90
K++IA FF LE+ + I + +D RP+GEA+V F E + L+ H +
Sbjct: 268 ATKEEIAAFFAPLEVPRDAKGELTIVIGQDNLQ-RPSGEAFVTFSSVEDSAKGLEYHLKN 326
Query: 91 IGHRYI 96
+G RYI
Sbjct: 327 LGKRYI 332
>gi|118401869|ref|XP_001033254.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila]
gi|89287602|gb|EAR85591.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila SB210]
Length = 1468
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK-HKERIGHRY 95
K +I +FF EI+ +G+ V + + TGE+++ +K+ A QK H ERI RY
Sbjct: 1296 KTKEIYEFFKDFEIVQDGVKRVYNYQEQKQTGESFIILKNKDQVREAKQKLHGERIFQRY 1355
Query: 96 I 96
I
Sbjct: 1356 I 1356
>gi|242022416|ref|XP_002431636.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516944|gb|EEB18898.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 966
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 34 VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
+E DI FF + ++ N I L+ D +G+P+G+A+ +F D AE A K+ +G
Sbjct: 792 LEANDRDICDFFSDIGLVPNKIHLMLDT-SGQPSGDAFCEFSDLNQAEKACTKNSAHLGK 850
Query: 94 RYIFFT 99
+ T
Sbjct: 851 NIVSVT 856
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++EMD +L G V+ +++ Q F+ I+ N +T++ D F G+P G AYV+FV+ E
Sbjct: 195 KEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIV-NRVTILTDKF-GQPKGFAYVEFVEVE 252
Query: 79 TAELALQKHKERIGHRYI 96
+ A++ ++ + R +
Sbjct: 253 AVQEAIKLNESELHGRQL 270
>gi|432101444|gb|ELK29626.1| Cysteine desulfurase, mitochondrial [Myotis davidii]
Length = 815
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 48 LEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R+I
Sbjct: 396 LDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNRFI 443
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 500 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 558
>gi|76155549|gb|AAX26841.2| SJCHGC06966 protein [Schistosoma japonicum]
Length = 106
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 35 EGKKDDIAQFFDGLEII---------------SNGITLVEDPFNGRPTGEAYVQFVDKET 79
DDI FF G + GI + P NGR GEA+++ K+
Sbjct: 18 SANADDIINFFKGTLVFRVFFNVSTDCTIRGGKRGIYFPQGP-NGRSNGEAFIELDSKDD 76
Query: 80 AELALQKHKERIGHRYI 96
E A+ H E +G RYI
Sbjct: 77 KEKAMAHHNEHMGRRYI 93
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
N IT++ D ++GRP G AY++F DKE+A +L
Sbjct: 91 NRITILCDRYSGRPKGFAYIEFADKESARASL 122
>gi|428180581|gb|EKX49448.1| hypothetical protein GUITHDRAFT_104977 [Guillardia theta CCMP2712]
Length = 443
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL-QKHKERIGHRYI 96
D+ FF GL ++ IT + GRP+GEA+V F E A A+ +K + +G RY+
Sbjct: 370 DVLNFFKGLGVLEESITFGINS-EGRPSGEAWVSFNRIEDARKAVREKDRHHMGDRYV 426
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 18 KVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
++ R+E+D + G V+ +D+ Q F + N +T+ D F G+P G AYV+FV
Sbjct: 59 QINREEVDARSIFVGNVDYACTPEDVQQHFQSCGTV-NRVTIRTDKF-GQPKGYAYVEFV 116
Query: 76 DKETAELALQKHKERIGHRYIFFTGHRYTV 105
+ E A+ AL ++ + R + T R V
Sbjct: 117 EVEAAQEALLLNESELHGRQLKVTAKRTNV 146
>gi|402587720|gb|EJW81655.1| hypothetical protein WUBG_07436, partial [Wuchereria bancrofti]
Length = 59
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ L P GR GEA V+F D E ELAL++H+ + +RYI
Sbjct: 2 GVALCLSP-EGRRNGEALVRFEDSEQRELALKRHRHFLHNRYI 43
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++EMD +L G V+ +++ Q F+ I+ N +T++ D F G+P G AYV+FV+ E
Sbjct: 150 KEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIV-NRVTILTDKF-GQPKGFAYVEFVEVE 207
Query: 79 TAELALQKHKERIGHRYI 96
+ A++ ++ + R +
Sbjct: 208 AVQEAIKLNESELHGRQL 225
>gi|226487874|emb|CAX75602.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma
japonicum]
Length = 150
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 36 GKKDDIAQFFDGLEII---------------SNGITLVEDPFNGRPTGEAYVQFVDKETA 80
DDI FF G + GI + P NGR GEA+++ K+
Sbjct: 14 ANADDIINFFKGTLVFRVFFNVFTDCTIRGGKRGIYFPQGP-NGRSNGEAFIELDSKDDK 72
Query: 81 ELALQKHKERIGHRYI 96
E A+ H E +G RYI
Sbjct: 73 EKAMAHHNEHMGRRYI 88
>gi|148701751|gb|EDL33698.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Mus
musculus]
Length = 311
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 141 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 196
>gi|380806715|gb|AFE75233.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca
mulatta]
Length = 112
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 38 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 93
>gi|148701753|gb|EDL33700.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Mus
musculus]
Length = 288
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 141 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 196
>gi|51476543|emb|CAH18256.1| hypothetical protein [Homo sapiens]
Length = 194
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 124 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 179
>gi|67971142|dbj|BAE01913.1| unnamed protein product [Macaca fascicularis]
Length = 286
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 139 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 194
>gi|326517396|dbj|BAK00065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHK 88
DI++FF GL+I+ LV NGR +GEA+V F AE AL ++K
Sbjct: 119 DISKFFSGLDIVD--CLLVHK--NGRFSGEAFVVFPSSMQAEFALHRNK 163
>gi|417409033|gb|JAA51043.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 251
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 124 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 179
>gi|380806713|gb|AFE75232.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca
mulatta]
Length = 118
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 38 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 93
>gi|417409228|gb|JAA51131.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 271
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 124 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 179
>gi|194389894|dbj|BAG60463.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 32 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 87
>gi|195127149|ref|XP_002008031.1| GI13280 [Drosophila mojavensis]
gi|193919640|gb|EDW18507.1| GI13280 [Drosophila mojavensis]
Length = 1101
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ ++F GL I NGI +V P NG TG AY++F +A+ AL ++ R +
Sbjct: 440 DLRKYFAGLYIPHNGIKIVSGP-NGTRTGVAYIEFSRVSSAQKALLRNNTLFRDRLV 495
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 14 IEVFKVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAY 71
I+V ++++D + + G V+ DI+ F I N +T+V D F+G P G Y
Sbjct: 81 IQVEGEAQEDVDKRSVYVGNVDYSATPTDISNHFASCGQI-NRVTIVCDKFSGHPKGFCY 139
Query: 72 VQFVDKETAELALQKHKERIGHRYIFFTGHRYTV 105
++F + ET + AL ++ + R I R +
Sbjct: 140 IEFAEPETVQNALLLNESMLCGRIISVVAKRTNI 173
>gi|74222440|dbj|BAE38120.1| unnamed protein product [Mus musculus]
Length = 272
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 125 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEDAVAAMSKDKANMQHRYV 180
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + +V DP G+P+G AY++F KE AE AL
Sbjct: 175 KDSLSRHFNKFGEVLKAF-IVTDPATGQPSGSAYIEFTRKEAAENAL 220
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRC 112
N +T++ D F G P G AY++F DKE + AL + F G Q +A C
Sbjct: 118 NRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDES-------LFRGR----QIKASFC 166
Query: 113 E-----TSIPVSSSTHKPGR 127
T+ P S+T++P R
Sbjct: 167 SVCAKRTNRPGVSTTNRPPR 186
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V D G+PTG AY++F+ KE+AE AL
Sbjct: 525 KDALSRHFNKFGAVLKTL-IVTDGVTGQPTGSAYIEFLQKESAEQAL 570
>gi|28279187|gb|AAH45946.1| Zgc:56148 [Danio rerio]
Length = 314
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 28 LQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
L+ TG+ KD++ FF GL++ + I +++P G +G + V+F KE A L++
Sbjct: 158 LKLTGMPFSATKDNVHNFFAGLKV--DDILFLKNP-RGMFSGNSMVRFTTKEDAIEGLKR 214
Query: 87 HKERIGHRYIFFT 99
++ +G RYI T
Sbjct: 215 DRQYMGSRYIQIT 227
>gi|112491343|pdb|2HGN|A Chain A, Nmr Structure Of The Third Qrrm Domain Of Human Hnrnp F
gi|297787489|pdb|2KG1|A Chain A, Structure Of The Third Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 139
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 60 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 115
>gi|159163284|pdb|1WEZ|A Chain A, Solution Structure Of Rrm Domain In Heterogeneous
Nuclear Ribonucleoprotein H'
Length = 102
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY
Sbjct: 27 ATENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRY 83
Query: 96 I 96
+
Sbjct: 84 V 84
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V + G+PTG AYV+F+ KE+AE AL
Sbjct: 549 KDSLSRHFNKFGAVLK-VVIVTNAATGQPTGSAYVEFLHKESAERAL 594
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
+G ++DI +F + +++N + +V D GRP G A+V++ D+ A+ A+Q+
Sbjct: 16 QGTEEDIGNYFSTVGVVNN-VRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 21 RQEMDWKLQHTGIV--EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V + +++ Q F+G I N +T++ D ++G P G AYV+F++ +
Sbjct: 131 KLESDSRSVYVGNVDYQATAEELGQHFNGCGSI-NRVTILCDKYSGHPKGFAYVEFIESD 189
Query: 79 TAELALQKHKERIGHRYIFFTGHR 102
+ ++AL + R I T R
Sbjct: 190 SVKMALDLDESLFRGRQIKVTAKR 213
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V + G+PTG AYV+F+ KE+AE AL
Sbjct: 548 KDSLSRHFNKFGAVLK-VVIVTNAATGQPTGSAYVEFLHKESAERAL 593
>gi|422294318|gb|EKU21618.1| rna binding protein [Nannochloropsis gaditana CCMP526]
Length = 302
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF + +NGI V +GR +GEA+V +E AL + K+++G R++
Sbjct: 2 DLQHFFASVGPTANGIFFVHR-MDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWL 57
>gi|194864880|ref|XP_001971153.1| GG14589 [Drosophila erecta]
gi|190652936|gb|EDV50179.1| GG14589 [Drosophila erecta]
Length = 995
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F GL I NGI ++ NG TG AYV+F +A+ ALQ++ R +
Sbjct: 373 DIRKYFQGLYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKALQRNNTMFRDRLV 427
>gi|149916144|ref|ZP_01904666.1| phage-related integrase [Roseobacter sp. AzwK-3b]
gi|149809999|gb|EDM69848.1| phage-related integrase [Roseobacter sp. AzwK-3b]
Length = 355
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 106 QHRAPRCETSIPVSSSTHKPGRHHTLDGPNGGG 138
+HR P CE ++ + TH+ GR H GP GG
Sbjct: 233 EHRVPLCERAVEILRQTHQLGRRHLFPGPRGGA 265
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRC 112
N T++ D F+G P G AYV+FVDK++ E A R I T R
Sbjct: 71 NRATILCDKFSGHPKGFAYVEFVDKDSVETAQALDDSLFKGRQIKVTPKR---------- 120
Query: 113 ETSIPVSSSTHKP 125
T+ P SST++P
Sbjct: 121 -TNRPGISSTNRP 132
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRC 112
N +T++ D + G P G AY++F DKE+ + A+ + F G + V P+
Sbjct: 118 NRVTILTDKYTGHPKGFAYIEFADKESVQTAMALDES-------LFRGRQIKV---CPK- 166
Query: 113 ETSIPVSSSTHKPGR 127
T+ P S+T++P R
Sbjct: 167 RTNRPGVSTTNRPPR 181
>gi|326674797|ref|XP_003200207.1| PREDICTED: RNA-binding protein 12B-A [Danio rerio]
Length = 685
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 28 LQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
L+ TG+ KD++ FF GL++ + I +++P G +G + V+F KE A L++
Sbjct: 158 LKLTGMPFSATKDNVHNFFAGLKV--DDILFLKNP-RGMFSGNSMVRFTTKEDAIEGLKR 214
Query: 87 HKERIGHRYIFFT 99
++ +G RYI T
Sbjct: 215 DRQYMGSRYIQIT 227
>gi|395730677|ref|XP_003775769.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Pongo abelii]
Length = 352
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTV-----QHRAPRCETS 115
GR +GEA+V+ +E ++AL+K +E +GHR I F H V +HR P S
Sbjct: 51 GRQSGEAFVELGXEENIKMALEKDRESMGHRRIAVFKSHXTEVSWVLKKHRGPNSAGS 108
>gi|213514986|ref|NP_001135185.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
gi|209149642|gb|ACI32984.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
Length = 204
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DIA FF L + I NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 113 DIANFFSPLTPVRVHIDFGP---NGKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYI 166
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 23 EMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
E D + + G V+ +++ Q F G I N +T++ + F+G P G AY++F DK++
Sbjct: 93 EADNRSVYVGNVDYGATAEELEQHFHGCGSI-NRVTILCNKFDGHPKGFAYIEFGDKDSV 151
Query: 81 ELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSSSTHKPGR 127
+ A+ + F G + V + T+ P SST++P R
Sbjct: 152 QTAMAMDES-------LFRGRQIKVMPK----RTNKPGLSSTNRPPR 187
>gi|94536671|ref|NP_001035439.1| uncharacterized protein LOC678601 [Danio rerio]
gi|92096562|gb|AAI15345.1| Zgc:136953 [Danio rerio]
gi|190338538|gb|AAI63730.1| Zgc:136953 [Danio rerio]
Length = 209
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ D+A FF L + I + NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 116 ESDVAHFFGPLTPVRVHIDMGP---NGKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYI 171
>gi|349605885|gb|AEQ00971.1| Heteroproteinous nuclear ribonucleoprotein H2-like protein, partial
[Equus caballus]
Length = 270
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K K + HRY+
Sbjct: 123 ENDIYNFFSPLNPMRVHIEIGPD---GRVTGEADVEFATHEDAVAAMAKDKANMQHRYV 178
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 23 EMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
E D + + G V+ +++ Q F G I N +T++ + F+G P G AY++F DK++
Sbjct: 93 EADNRSVYVGNVDYGATAEELEQHFHGCGSI-NRVTILCNKFDGHPKGFAYIEFGDKDSV 151
Query: 81 ELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSSSTHKPGR 127
+ A+ + F G + V + T+ P SST++P R
Sbjct: 152 QTAMAMDES-------LFRGRQIKVMPK----RTNKPGLSSTNRPPR 187
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 23 EMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
E+D + + G V+ +++ Q F G I N +T++ D F+G P G AY++F DK++
Sbjct: 117 EVDARSIYVGNVDYGATAEELEQHFHGCGSI-NRVTILCDKFSGHPKGFAYIEFTDKDSI 175
Query: 81 ELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSSSTHKP 125
+ A+ + F G + V + T+ P S+T++P
Sbjct: 176 QTAMALDES-------LFRGRQIKVMTK----RTNRPGISTTNRP 209
>gi|401395936|ref|XP_003879715.1| putative RRM domain-containing protein [Neospora caninum Liverpool]
gi|325114122|emb|CBZ49680.1| putative RRM domain-containing protein [Neospora caninum Liverpool]
Length = 246
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 39 DDIAQFFDGLEIISNGITLVE--DPFNGRPTGEAYVQFVDKETAELALQ-KHKERIGHRY 95
DDIAQFF+G + ++ +GRPTG A V F ++ A A Q KH+ + RY
Sbjct: 153 DDIAQFFEGYSLAGPPEEAIQLHRRMDGRPTGWASVYFETEQEARRAKQDKHRSYLHGRY 212
Query: 96 I 96
I
Sbjct: 213 I 213
>gi|334327209|ref|XP_001378263.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Monodelphis domestica]
Length = 231
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 1 MGHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVE 59
+ +C +G RY + ++ D + G+ ++DI FF + I +
Sbjct: 66 LNYCFSGMSDHRYGDGGSTFQRTTDHCVHMRGLPYRVTENDIYNFFSPFNPVREHIEIGP 125
Query: 60 DPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D GR TGE V+F E A A+ K K + HRY+
Sbjct: 126 D---GRVTGEVDVEFATHEDAVAAMSKDKANMQHRYV 159
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 49 RMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 107
Query: 79 TAELAL 84
+ +L
Sbjct: 108 SVRTSL 113
>gi|395849855|ref|XP_003797528.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 243
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 130 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 185
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 17/53 (32%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGK-----------------KDDIAQFFDG 47
+YIEVFK R EMDW L+H+G K++I QFF G
Sbjct: 13 QYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSG 65
>gi|328909179|gb|AEB61257.1| heterogeneous nuclear ribonucleoprotein F-like protein, partial
[Equus caballus]
Length = 113
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 1 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 56
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 21 RQEMDWKLQHTGIVEGKK--DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E+D + + G V+ K D I +F + N IT++ D G P G YV+F++KE
Sbjct: 2 QEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTV-NRITILSDKTTGHPKGCCYVEFLNKE 60
Query: 79 TAELALQKHKERIGHRYIFFTGHR 102
+ A+ + R I T R
Sbjct: 61 SINNAMALNDSIFNDRQIKITPKR 84
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + T+V DP G+P+G AY++F KE AE AL
Sbjct: 519 KDSLSRHFNKCGEVLKA-TIVTDPATGQPSGSAYIEFTRKEAAENAL 564
>gi|357139487|ref|XP_003571313.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Brachypodium distachyon]
Length = 827
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
I +FF + +++ I L+ D F + G AYV F+DKE E A++K+K+++
Sbjct: 679 IRRFFSDIGGVAD-IRLLRDRFTKKSRGLAYVDFLDKEHLEAAIKKNKQKL 728
>gi|383276062|dbj|BAM09220.1| heterogenous nuclear ribonucleoprotein F, partial [Ursus thibetanus
japonicus]
Length = 150
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 80 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 135
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G VE +++ Q F G + N +T++ D F+G P G AY++F +KE
Sbjct: 84 KMETDNRSIYVGQVEYATTAEELEQHFHGCGAL-NRVTIICDKFSGHPKGFAYIEFTEKE 142
Query: 79 TAELAL 84
+ + +L
Sbjct: 143 SVDASL 148
>gi|344252227|gb|EGW08331.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 185
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 72 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 127
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G VE +++ Q F G + N +T++ D F+G P G AY++F +KE
Sbjct: 84 KMETDNRSIYVGQVEYATTAEELEQHFHGCGAL-NRVTIICDKFSGHPKGFAYIEFTEKE 142
Query: 79 TAELAL 84
+ + +L
Sbjct: 143 SVDASL 148
>gi|18605870|gb|AAH23162.1| Hnrpf protein, partial [Mus musculus]
Length = 188
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DI FF L + I + D GR TGEA V+F E A A+ K + + HRYI
Sbjct: 75 ENDIYNFFSPLNPVRVHIEIGPD---GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 130
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 18 KVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
++ R+E+D + G V+ +D+ Q F + N +T+ D F G+P G AYV+FV
Sbjct: 59 QINREEVDARSIFVGNVDYACTPEDVQQHFQSCGTV-NRVTIRTDKF-GQPKGYAYVEFV 116
Query: 76 DKETAELALQKHKERIGHRYIFFTGHRYTV 105
+ E + AL ++ + R + T R V
Sbjct: 117 EVEAVQEALLLNESELHGRQLKVTAKRTNV 146
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
D++ F G +I+ T+ ++ F+ R AY++F DK + E+AL H+ R I
Sbjct: 69 DELEAHFKGCGVITRA-TIPKNKFSQRQKNFAYIEFEDKNSVEMALLMHESIFRDRKIVV 127
Query: 99 TGHRYTV 105
T R V
Sbjct: 128 TAKRTNV 134
>gi|119627575|gb|EAX07170.1| hCG1641872, isoform CRA_a [Homo sapiens]
Length = 131
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 61 PFNGRPTGEAYVQFVDKETAELALQKHKERIGH-RYIFFTGHRYTV 105
P GR +GEA+ + +E ++AL+K +E +GH R F HR V
Sbjct: 32 PERGRQSGEAFAELGSEEDVKMALEKDRESMGHWRIAVFKSHRTEV 77
>gi|300120924|emb|CBK21166.2| unnamed protein product [Blastocystis hominis]
Length = 361
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 63 NGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFT 99
+GR G A+V F ++ A+ AL+K+KE IG RYI +
Sbjct: 183 SGRCRGYAFVSFTNQAGAQAALKKNKEYIGERYITIS 219
>gi|326520627|dbj|BAK07572.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD ++ F+ + + +V D G+PTG AY++F++KE+AE AL
Sbjct: 337 KDGLSCHFNKFGAVLKTL-IVSDGATGQPTGSAYIEFLEKESAEKAL 382
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 23 EMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETA 80
E+D + + G V+ +++ Q F G I N +T++ D F+G P G AY++F DK++
Sbjct: 117 EVDARSIYVGNVDYGATAEELEQHFHGCGSI-NRVTILCDKFSGHPKGFAYIEFTDKDSI 175
Query: 81 ELAL 84
+ A+
Sbjct: 176 QTAM 179
>gi|218201413|gb|EEC83840.1| hypothetical protein OsI_29794 [Oryza sativa Indica Group]
gi|222640831|gb|EEE68963.1| hypothetical protein OsJ_27861 [Oryza sativa Japonica Group]
Length = 725
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V + G+PTG AYV+F+ KE+AE AL
Sbjct: 582 KDALSRHFNKFGAVLK-VVIVTNAATGQPTGSAYVEFLHKESAERAL 627
>gi|195336616|ref|XP_002034931.1| GM14203 [Drosophila sechellia]
gi|194128024|gb|EDW50067.1| GM14203 [Drosophila sechellia]
Length = 987
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F GL I NGI ++ NG TG AYV+F +A+ A+Q++ R +
Sbjct: 373 DIRKYFQGLYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLV 427
>gi|115477168|ref|NP_001062180.1| Os08g0504600 [Oryza sativa Japonica Group]
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113624149|dbj|BAF24094.1| Os08g0504600 [Oryza sativa Japonica Group]
Length = 684
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V + G+PTG AYV+F+ KE+AE AL
Sbjct: 541 KDALSRHFNKFGAVLK-VVIVTNAATGQPTGSAYVEFLHKESAERAL 586
>gi|367050156|ref|XP_003655457.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
gi|347002721|gb|AEO69121.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
Length = 566
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
D I +FF+G ++S + ++ED RP G AY +F D E + AL +
Sbjct: 92 DTITEFFEGCNVLS--VRIIEDREQNRPKGFAYAEFADLEGLKSALTR 137
>gi|85683183|gb|ABC73567.1| CG7879 [Drosophila miranda]
Length = 309
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ ++F GL I NGI ++ NG TG AY++F +A+ ALQ++ R +
Sbjct: 48 DLRKYFQGLYIPHNGIKIM--TVNGSRTGVAYIEFSRVSSAQKALQRNNTMFRDRQV 102
>gi|195586962|ref|XP_002083236.1| GD13466 [Drosophila simulans]
gi|194195245|gb|EDX08821.1| GD13466 [Drosophila simulans]
Length = 986
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F GL I NGI ++ NG TG AYV+F +A+ A+Q++ R +
Sbjct: 372 DIRKYFQGLYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLV 426
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 166 RMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 224
Query: 79 TAELAL 84
+ +L
Sbjct: 225 SVRTSL 230
>gi|327269587|ref|XP_003219575.1| PREDICTED: RNA-binding protein 12B-like [Anolis carolinensis]
Length = 730
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+DDI FFDGL++ +G+ +++ NG G+ V+F LQ+ ++ + HR+I
Sbjct: 190 EDDIIAFFDGLQV--DGMIMLKT--NGVNNGDGLVKFATPTDCTRGLQRDRQYMRHRFI 244
>gi|413941668|gb|AFW74317.1| hypothetical protein ZEAMMB73_670043 [Zea mays]
Length = 837
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 34 VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++ +DD+ +FF + + I L+ D F + G AYV F+D + E A++K+K+++
Sbjct: 680 LKANEDDLRRFFSDIGG-ATAIRLLRDRFTKKSRGLAYVDFLDNKHLEAAIKKNKQKL 736
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R+E+D + + G V+ +++ Q F I N +T++ D F G P G AYV+F D
Sbjct: 90 REEVDSRSIYVGNVDYGATPEELQQHFQSCGTI-NRVTILCDKFTGHPKGYAYVEFADPS 148
Query: 79 TAELALQKHKERIGHRYIFFTGHR 102
A+ ++ R I T R
Sbjct: 149 LVANAMVLNESLFRGRLIKITAKR 172
>gi|322692273|gb|EFY84203.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 552
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ +FF+G EI+S + ++ED RP G YV+F D E + AL E R I
Sbjct: 95 VTEFFEGCEIVS--VRIIEDREMQRPKGFGYVEFADIEGLKKALTLDGESFNGRMI 148
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R + D + + G V+ D++ F+G + N +T++ D F+G P G AY++F D+
Sbjct: 73 RMDADNRSVYVGNVDYGATADELEIHFNGCGPV-NRVTILCDRFSGHPKGFAYIEFSDRS 131
Query: 79 TAELALQKHK 88
A+ A+ H+
Sbjct: 132 AAQSAVGLHE 141
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ D F+G P G AYV+F DK+
Sbjct: 34 KAEVDARSVYVGNVDYSATAEELEQHFHGCGSV-NRVTILCDKFSGHPKGFAYVEFSDKD 92
Query: 79 TAELAL 84
+ + A+
Sbjct: 93 SVDNAV 98
>gi|123468567|ref|XP_001317501.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121900236|gb|EAY05278.1| hypothetical protein TVAG_020240 [Trichomonas vaginalis G3]
Length = 295
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
+D++ FD + + N +TL P NG G A ++F D +TA+ AL+ ++ +IG+R+I
Sbjct: 19 EDELKTHFDSIGEVLN-VTLKTRP-NGDFMGSAIIEFKDHDTAKAALKMNETKIGNRFIS 76
Query: 98 FTGHRYTVQHRAPR 111
+ + RA R
Sbjct: 77 VELKKSPEELRAER 90
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + +V DP G+P+G AY++F KE AE AL
Sbjct: 493 KDSLSRHFNKFGEVLKAF-IVTDPATGQPSGSAYIEFTRKEAAENAL 538
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
N I + + NGRP G AYV+F +E AELA++K
Sbjct: 31 NDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEK 64
>gi|195490443|ref|XP_002093142.1| GE20949 [Drosophila yakuba]
gi|194179243|gb|EDW92854.1| GE20949 [Drosophila yakuba]
Length = 1002
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F GL I NGI ++ NG TG AYV+F +A+ A+Q++ R +
Sbjct: 369 DIRKYFQGLYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLV 423
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E+D + + G V+ G D+ F I N IT++ D F+G P G AY++F ++
Sbjct: 87 KKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSI-NRITILCDKFSGHPKGYAYIEFAERN 145
Query: 79 TAELAL 84
+ ++A+
Sbjct: 146 SVDVAV 151
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTV 105
N IT++ D + G P G AY++F +E+ E AL ++ R I T R +
Sbjct: 68 NRITIMVDKWTGHPKGYAYIEFAQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 38 KDDIAQFFDGL-EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KD +++ F+ E++ + LV D G+PTG AYV+F+ KE A+ AL R +
Sbjct: 518 KDSLSRHFNKFGEVLK--VVLVTDAATGQPTGSAYVEFMRKEAADNALSLDGTSFMSRIV 575
Query: 97 FFTGHRYTVQHRAPRCETSIPVSSSTHKPGRHHTLDGPNG 136
+ Q +P S++ GR P G
Sbjct: 576 KVMKRSSSNQEASPVMTWPRISRGSSYAAGRFARTPFPRG 615
>gi|20152135|gb|AAM11427.1| SD09402p [Drosophila melanogaster]
Length = 984
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F G+ I NGI ++ NG TG AYV+F +A+ A+Q++ R I
Sbjct: 369 DIRKYFQGMYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLI 423
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 24 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 82
Query: 79 TAELAL 84
+ +L
Sbjct: 83 SVRTSL 88
>gi|24655341|ref|NP_647626.1| CG7879, isoform A [Drosophila melanogaster]
gi|24655346|ref|NP_728631.1| CG7879, isoform B [Drosophila melanogaster]
gi|7292101|gb|AAF47513.1| CG7879, isoform A [Drosophila melanogaster]
gi|7292102|gb|AAF47514.1| CG7879, isoform B [Drosophila melanogaster]
Length = 985
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI ++F G+ I NGI ++ NG TG AYV+F +A+ A+Q++ R I
Sbjct: 369 DIRKYFQGMYIPHNGIKIMM--VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLI 423
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R+E+D + + G V+ +++ Q F I N +T++ D F G P G AYV+F D
Sbjct: 92 REEVDSRSIYVGNVDYGATPEEVQQHFQSCGTI-NRVTILCDKFTGHPKGFAYVEFADPS 150
Query: 79 TAELALQKHKERIGHRYIFFTGHR 102
A+ ++ R I T R
Sbjct: 151 LVANAMVLNESLFRGRLIKVTAKR 174
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
D++ F G +I+ T+ +D ++ R AY++F +KE+ E+AL H+ R I
Sbjct: 67 DELEAHFKGCGLITRT-TIPKDKYSQRQKNFAYIEFEEKESVEMALIMHETTFRDRQIVV 125
Query: 99 TGHRYTV 105
T R V
Sbjct: 126 TAKRTNV 132
>gi|198465484|ref|XP_001353649.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
gi|198150179|gb|EAL31163.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
Length = 1043
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ ++F GL I NGI ++ NG TG AY++F +A+ ALQ++ R +
Sbjct: 406 DLRKYFQGLYIPHNGIKIMT--VNGSRTGVAYIEFSRVSSAQKALQRNNTMFRDRQV 460
>gi|195175076|ref|XP_002028289.1| GL16722 [Drosophila persimilis]
gi|194117421|gb|EDW39464.1| GL16722 [Drosophila persimilis]
Length = 1044
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ ++F GL I NGI ++ NG TG AY++F +A+ ALQ++ R +
Sbjct: 406 DLRKYFQGLYIPHNGIKIMT--VNGSRTGVAYIEFSRVSSAQKALQRNNTMFRDRQV 460
>gi|126322103|ref|XP_001368765.1| PREDICTED: RNA-binding protein 12B-like [Monodelphis domestica]
Length = 745
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D++ FF GL + +GI L++ P GR G+ V+F A LQ+H+ +G R++
Sbjct: 180 EDEVRAFFPGLCV--DGIILLKHP-TGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFV 235
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 16 VFKVRRQEMDWKLQHTGIVEGKK--DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQ 73
+ ++E+D + + G V+ K D I +F + N IT++ D G P G YV+
Sbjct: 90 LMNTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTV-NRITILSDKTTGHPKGCCYVE 148
Query: 74 FVDKETAELALQKHKERIGHRYIFFTGHR 102
FV+KE+ A+ + R + T R
Sbjct: 149 FVNKESIINAMALNDSFFNERQLKITPKR 177
>gi|119627576|gb|EAX07171.1| hCG1641872, isoform CRA_b [Homo sapiens]
Length = 410
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 61 PFNGRPTGEAYVQFVDKETAELALQKHKERIGH-RYIFFTGHR 102
P GR +GEA+ + +E ++AL+K +E +GH R F HR
Sbjct: 32 PERGRQSGEAFAELGSEEDVKMALEKDRESMGHWRIAVFKSHR 74
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + +V DP G+P+G AY++F KE AE AL
Sbjct: 529 KDSLSRHFNKFGEVLKAF-IVTDPATGQPSGSAYIEFTRKEAAENAL 574
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + +V DP G+P+G AY++F KE AE AL
Sbjct: 517 KDSLSRHFNKFGEVLKAF-IVTDPATGQPSGSAYIEFTRKEAAENAL 562
>gi|324497690|gb|ADY39495.1| putative RNA-binding protein [Hottentotta judaicus]
Length = 98
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 63 NGRPTGEAYVQFVDKETAELALQ-KHKERIGHRYI 96
+GRP GEA V F + AE A+Q K++ IG+RYI
Sbjct: 59 DGRPNGEALVTFPSRADAERAIQEKNRHNIGNRYI 93
>gi|322704001|gb|EFY95601.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 555
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ + +FF+G E++S + ++ED RP G YV+F D E + AL E R I
Sbjct: 97 ESVTEFFEGCEVVS--VRIIEDREMQRPKGFGYVEFADIEGLKKALTLDGESFNGRMI 152
>gi|413941667|gb|AFW74316.1| hypothetical protein ZEAMMB73_670043 [Zea mays]
Length = 342
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 34 VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++ +DD+ +FF + + I L+ D F + G AYV F+D + E A++K+K+++
Sbjct: 185 LKANEDDLRRFFSDIGGAT-AIRLLRDRFTKKSRGLAYVDFLDNKHLEAAIKKNKQKL 241
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E+D + + G V+ G D+ F I N IT++ D F+G P G AY++F ++
Sbjct: 87 KKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSI-NRITILCDKFSGHPKGYAYIEFAERN 145
Query: 79 TAELAL 84
+ + A+
Sbjct: 146 SVDAAV 151
>gi|400599198|gb|EJP66902.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 537
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ FF G EI+S + ++ED RP G YV+F D E + ALQ E R I
Sbjct: 84 VTDFFAGSEIVS--VRIIEDREMQRPKGFGYVEFTDLEGLKKALQLDGESFQGRMI 137
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R + D + + G V+ D++ F+G + N +T++ D F+G P G AY++F D++
Sbjct: 54 RIDADNRSIYVGNVDYGATADELEIHFNGCGPV-NRVTILCDRFSGHPKGFAYIEFSDRD 112
Query: 79 TAELALQKHK 88
+ + A+ H+
Sbjct: 113 SVQSAIGLHE 122
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
N +T++ D F+G P G AY++F DK + ++A++ + R I
Sbjct: 168 NRVTILCDKFSGHPKGYAYIEFADKSSVKVAMELDESVFRDRVI 211
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 38 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 96
Query: 79 TAELAL 84
+ +L
Sbjct: 97 SVRTSL 102
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E D + + G V+ +++ +FF + I N +T++ D F GRP G AYV+F +
Sbjct: 66 QKETDSRSVYIGNVDYNTTPEELEEFFSKIGTI-NRVTILFDRFTGRPKGYAYVEFESQS 124
Query: 79 TAELAL----QKHKERI 91
+ + A+ Q+ K+RI
Sbjct: 125 SVDSAIGLSGQEFKDRI 141
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 38 KDDIAQFFDGL-EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ E++ + +V D G+PTG AYV+F+ KE A+ AL
Sbjct: 559 KDSLSRHFNKFGEVLK--VVIVTDAATGQPTGSAYVEFMHKEAADNAL 604
>gi|116193433|ref|XP_001222529.1| hypothetical protein CHGG_06434 [Chaetomium globosum CBS 148.51]
gi|88182347|gb|EAQ89815.1| hypothetical protein CHGG_06434 [Chaetomium globosum CBS 148.51]
Length = 397
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCET 114
IT E NG+ G+AYV+F ++ A A + H + + + Y R+TV + AP
Sbjct: 140 ITFSEHKINGKSKGQAYVEFTSQQAA-TATKHHVDSLTNEYSQPGQKRHTVIYSAP---- 194
Query: 115 SIPVSSSTHKPGRHHTLDGPN 135
TH P R D PN
Sbjct: 195 -------THNPFRTLPKDAPN 208
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 38 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 96
Query: 79 TAELAL 84
+ +L
Sbjct: 97 SVRTSL 102
>gi|159163850|pdb|2CPY|A Chain A, Solution Structure Of Rna Binding Domain 3 In Rna
Binding Motif Protein 12
Length = 114
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 29 KMDVLQFLEGIPVDENAVHVLVDN-NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 87
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 38 KDDIAQFFDGL-EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KD +++ F+ E++ + +V D G+P G AYV+F+ KE AE AL R +
Sbjct: 537 KDSLSRHFNKFGEVVK--VIIVTDAATGQPKGSAYVEFMRKEAAEHALSLDGTSFMSRIL 594
Query: 97 FFTGHRYTVQHRAP 110
T Q AP
Sbjct: 595 KVVKRSSTHQEAAP 608
>gi|7739449|gb|AAF68852.1|AF132364_1 hnRNP 2H9E [Homo sapiens]
gi|7739439|gb|AAF68846.1| hnRNP 2H9E [Homo sapiens]
Length = 139
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 36 GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++DIA FF L I I + D GR TGEA V+FV E A A+ K K +
Sbjct: 69 ATENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNM 121
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 49 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 107
Query: 79 TAELAL 84
+ +L
Sbjct: 108 SVRTSL 113
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQK 86
++ I QFF + ++N + +V D GRP G A+V+F D+ A+ A+Q+
Sbjct: 18 EEQIGQFFSNVGQVNN-VRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
N +T++ D F+G P G AYV+FVDK++ + A
Sbjct: 138 NRVTILCDKFSGHPKGFAYVEFVDKDSVQTA 168
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
++I Q F I N +T++ D F G P G AYV+F + E+ + AL R I
Sbjct: 96 EEIQQHFQACGTI-NRVTILCDKFTGHPKGFAYVEFAEPESIDTALAMDNSLFRGRLIKV 154
Query: 99 TGHRYTV 105
T R +
Sbjct: 155 TSKRTNI 161
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 38 KDDIAQFFDGL-EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KD +++ F+ E++ + +V D G+P G AYV+F+ KE AE AL R +
Sbjct: 543 KDSLSRHFNKFGEVVK--VIIVTDAATGQPKGSAYVEFMRKEAAEHALSLDGTSFMSRIL 600
Query: 97 FFTGHRYTVQHRAP 110
T Q AP
Sbjct: 601 KVVKRSSTHQEAAP 614
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + TL+ G+PTG AY++F+ KE+AE AL
Sbjct: 528 KDALSRHFNKFGAVLK--TLIVTDIAGQPTGSAYIEFLHKESAEQAL 572
>gi|7739447|gb|AAF68851.1|AF132363_2 hnRNP 2H9D [Homo sapiens]
gi|7739438|gb|AAF68845.1| hnRNP 2H9D [Homo sapiens]
gi|119574674|gb|EAW54289.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_f
[Homo sapiens]
Length = 145
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI 91
++DIA FF L I I + D GR TGEA V+FV E A A+ K K +
Sbjct: 77 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNM 127
>gi|395512126|ref|XP_003760295.1| PREDICTED: RNA-binding protein 12B [Sarcophilus harrisii]
Length = 745
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D++ FF GL + +G+ L++ P GR G+ V+F A LQ+H+ +G R++
Sbjct: 180 EDEVRAFFPGLCV--DGVILLKHP-TGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFV 235
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + TL+ G+PTG AY++F+ KE+AE AL
Sbjct: 528 KDALSRHFNKFGAVLK--TLIVTDIAGQPTGSAYIEFLHKESAEQAL 572
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 54 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 112
Query: 79 TAELAL 84
+ +L
Sbjct: 113 SVRTSL 118
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + TL+ G+PTG AY++F+ KE+AE AL
Sbjct: 332 KDALSRHFNKFGAVLK--TLIVTDIAGQPTGSAYIEFLHKESAEQAL 376
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + TL+ G+PTG AY++F+ KE+AE AL
Sbjct: 267 KDALSRHFNKFGAVLK--TLIVTDIAGQPTGSAYIEFLHKESAEQAL 311
>gi|313244026|emb|CBY14896.1| unnamed protein product [Oikopleura dioica]
Length = 407
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+I +FF +++ I + +D GR TG A+ F + A+QK+K+ +G RY+
Sbjct: 280 EIREFFSPIDLTDVRIEIGKD---GRTTGNAFAAFFSDDDVWNAMQKNKQMLGTRYV 333
>gi|242082291|ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
gi|241942264|gb|EES15409.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
Length = 694
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
KD +++ F+ + + +V + G+PTG AYV+F+ KE+AE AL
Sbjct: 548 KDSLSRHFNKFGAVLK-VVIVTNAATGQPTGSAYVEFLHKESAERAL 593
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 135 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 193
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTV 105
+ +L + R I + TV
Sbjct: 194 SVRTSLALDESLFRGRQIKVSSMLVTV 220
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+QE+D + G V+ +++ Q F + N +T++ D F G+P G AYV+F++ E
Sbjct: 83 KQEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV-NRVTILTDKF-GQPKGYAYVEFLEVE 140
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTV 105
+ ALQ ++ + R + + R V
Sbjct: 141 AVQEALQLNESELHGRQLKVSAKRTNV 167
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 54 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 112
Query: 79 TAELAL 84
+ +L
Sbjct: 113 SVRTSL 118
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 68 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 126
Query: 79 TAELAL 84
+ +L
Sbjct: 127 SVRTSL 132
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ ++ +I FF L+ I + L+ D R +G A+V F K + AL+KHK ++G R
Sbjct: 438 KAREPEIVGFFKPLKPID--VRLLFDK-RKRSSGRAFVDFATKPEWKKALEKHKSKMGKR 494
Query: 95 YIFFTG 100
YI T
Sbjct: 495 YIEVTA 500
>gi|389744295|gb|EIM85478.1| hypothetical protein STEHIDRAFT_147866 [Stereum hirsutum FP-91666
SS1]
Length = 715
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 40 DIAQFFDGLEIISNGITLVEDP--FNGRPTGEAYVQFVDKETAELALQKHKERI 91
D Q D + GIT V P F GR AYV+F D+E + AL KH E++
Sbjct: 600 DETQLRDFFQDSKEGITRVTFPNTFGGRNQKIAYVEFGDEEAMKAALTKHAEKL 653
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G I N +T++ + F+G P G AY++F D++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSI-NRVTILCNRFDGHPKGFAYIEFGDRD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSSSTHKPGR 127
+ + A+ + F G + V + T+ P S+T++P R
Sbjct: 153 SVQTAMAMDES-------LFRGRQIKVMPK----RTNRPGISTTNRPPR 190
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
R E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 226 RMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 284
Query: 79 TAELAL 84
+ +L
Sbjct: 285 SVRTSL 290
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KREVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +V +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 148 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 206
Query: 79 TAELAL 84
+ +L
Sbjct: 207 SVRTSL 212
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNG 64
G V D + ++E+D + + G V+ +++ Q F + N +T++ D F G
Sbjct: 27 GAVQDAGSSATQAEKEEVDGRSIYVGNVDYACTPEEVQQHFQSCGTV-NRVTILTDKF-G 84
Query: 65 RPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTV 105
+P G AYV+FV+ E + A+ ++ + R + + R V
Sbjct: 85 QPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKVSAKRTNV 125
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 135 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 193
Query: 79 TAELAL 84
+ +L
Sbjct: 194 SVRTSL 199
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFF 98
++I Q F I N +T++ D F G P G AYV+F + E + AL R I
Sbjct: 91 EEIQQHFQACGTI-NRVTILCDKFTGHPKGYAYVEFSETEHVDAALSMDNSLFRGRLIKV 149
Query: 99 TGHRYTV 105
T R +
Sbjct: 150 TAKRTNI 156
>gi|290990600|ref|XP_002677924.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
gi|284091534|gb|EFC45180.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
Length = 377
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGH 93
+ +V DP +G+ G YVQ DKET E L+ K R H
Sbjct: 305 VRIVRDPISGKCKGFGYVQLKDKETVEEILKSIKSRKAH 343
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +++ +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|395735012|ref|XP_002814888.2| PREDICTED: G-rich sequence factor 1 [Pongo abelii]
Length = 459
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 19/78 (24%)
Query: 12 RYIEVFKVRRQEMDWKLQ----------HTGIVEGK-------KDDIAQFFDGLEIISNG 54
RY+EV+++ +++D ++ + G+V + + DI FF GL I+
Sbjct: 221 RYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD-- 278
Query: 55 ITLVEDPFNGRPTGEAYV 72
IT V D R TGEAYV
Sbjct: 279 ITFVMDYRGRRKTGEAYV 296
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 38 KDDIAQFFDGL-EIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
KD +++ F+ E++ + +V D G+P G AYV+F+ KE A+ AL R +
Sbjct: 334 KDGLSRHFNRFGEVLK--VIIVTDAATGQPKGAAYVEFMRKEAADNALSLDNTSFMSRIL 391
Query: 97 FFTGHRYTVQHRAP 110
T Q AP
Sbjct: 392 KVIKKSATTQESAP 405
>gi|449284118|gb|EMC90699.1| RNA-binding protein 12B [Columba livia]
Length = 698
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 25 DWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D L GI +D++ FF G+ + +G+ L++ NG G+ V+F A
Sbjct: 173 DLYLYLRGIPYSATEDEVRAFFSGIHV--DGVILIKH-RNGLSNGDCLVKFATPGDALEG 229
Query: 84 LQKHKERIGHRYI 96
LQ+H++ +G R+I
Sbjct: 230 LQRHRQYMGQRFI 242
>gi|345325737|ref|XP_003430953.1| PREDICTED: G-rich sequence factor 1-like [Ornithorhynchus anatinus]
Length = 224
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 155 QANAQDIVNFFSPLKPVR--ITM-EYSSSGKATGEADVHFESHEDAVAAMAKDRSHVQHR 211
Query: 95 YI 96
YI
Sbjct: 212 YI 213
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 166 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 224
Query: 79 TAELAL 84
+ +L
Sbjct: 225 SVRTSL 230
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +++ +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|389743266|gb|EIM84451.1| hypothetical protein STEHIDRAFT_123242 [Stereum hirsutum FP-91666
SS1]
Length = 1114
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 20 RRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKET 79
R W H + G +++ + FDGLE + LVE G+P AY+ FV
Sbjct: 760 RTGNFSWVYVHGWV--GTGEELEREFDGLEGVEK--VLVERKIPGKPWRAAYIGFVHPRY 815
Query: 80 AELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSSSTHKPGRHHTLD 132
A+ A Q G ++ + ++P S+ T PG H+ D
Sbjct: 816 ADAARQAK-----------NGKPSSIPLPSTYNSQTLPSSTPTDTPGSHYIFD 857
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++++D + + G V+ +++ Q F + N +T++ D F G+P G AYV+F+++E
Sbjct: 84 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTV-NRVTILTDKF-GQPKGFAYVEFLEQE 141
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTV---QHRAPR 111
+ AL ++ + R I + R V + R PR
Sbjct: 142 AVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 177
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELAL 84
+DD+ F +S G+ L +DP +GRP G YV+F +E+A+ AL
Sbjct: 319 EDDVWNAFSEHGEVS-GVRLPKDPDSGRPKGFGYVEFAAQESAQAAL 364
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +++ +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++++D + + G V+ +++ Q F + N +T++ D F G+P G AYV+F+++E
Sbjct: 78 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTV-NRVTILTDKF-GQPKGFAYVEFLEQE 135
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTV---QHRAPR 111
+ AL ++ + R I + R V + R PR
Sbjct: 136 AVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 171
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 166 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 224
Query: 79 TAELAL 84
+ +L
Sbjct: 225 SVRTSL 230
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 166 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 224
Query: 79 TAELAL 84
+ +L
Sbjct: 225 SVRTSL 230
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 168 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 226
Query: 79 TAELAL 84
+ +L
Sbjct: 227 SVRTSL 232
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
++++D + + G V+ +++ Q F + N +T++ D F G+P G AYV+F+++E
Sbjct: 78 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTV-NRVTILTDKF-GQPKGFAYVEFLEQE 135
Query: 79 TAELALQKHKERIGHRYIFFTGHRYTV---QHRAPR 111
+ AL ++ + R I + R V + R PR
Sbjct: 136 AVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 171
>gi|3970860|dbj|BAA34794.1| HRIHFB2091 [Homo sapiens]
Length = 376
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIF 97
K D+ QF +G+ + N + ++ D NG+ G+A VQF +++ A + + H++++ R F
Sbjct: 1 KMDVLQFLEGIPVDENAVHVLVD-NNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAF 59
>gi|148231978|ref|NP_001083138.1| RNA binding motif protein 12B [Xenopus laevis]
gi|37805207|gb|AAH60345.1| MGC68792 protein [Xenopus laevis]
Length = 654
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D+ FF G ++ ++ NG G AYV+F + A+ +L + E IGHR I
Sbjct: 172 DVKDFFHGFHVVDVHFSVRS---NGARDGNAYVKFASVQDAKASLSRDYEYIGHRRI 225
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +V +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 133 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 191
Query: 79 TAELAL 84
+ +L
Sbjct: 192 SVRTSL 197
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 18 KVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
+ R+E+D + G V+ +++ Q F + N IT+ D F G+P G AYV+FV
Sbjct: 59 QANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV-NRITIRTDKF-GQPKGYAYVEFV 116
Query: 76 DKETAELALQKHKERIGHRYIFFTGHRYTV 105
+ E + AL ++ + R + T R +
Sbjct: 117 EPEAVQEALLLNESELHGRQLKVTAKRTNI 146
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G + N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSV-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +V +R PR
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ 85
+ D + +FF+ N +V+D +GR G YV+F D+ET + ALQ
Sbjct: 189 RSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETVQKALQ 237
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E+D + + G V+ +++ Q F G I N +T++ + F+G P G AY++F +++
Sbjct: 94 KMEVDNRSIYVGNVDYGATAEELEQHFHGCGSI-NRVTILCNKFDGHPKGFAYIEFAERD 152
Query: 79 TAELALQKHKERIGHRYIFFTGHR-----YTVQHRAPR 111
+ + A+ + R I R +V +R PR
Sbjct: 153 SVQTAMAIDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 18 KVRRQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFV 75
+ R+E+D + G V+ +++ Q F + N IT+ D F G+P G AYV+FV
Sbjct: 59 QANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV-NRITIRTDKF-GQPKGYAYVEFV 116
Query: 76 DKETAELALQKHKERIGHRYIFFTGHRYTV 105
+ E + AL ++ + R + T R +
Sbjct: 117 EPEAVQEALLLNESELHGRQLKVTAMRTNI 146
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTV 105
N +T++ D F G+P G AY++F K+ E AL + R + T R V
Sbjct: 138 NRVTILCDKFTGQPKGYAYIEFASKDAVESALLLNDTMFRGRQLKVTPKRQNV 190
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 37 KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQ 85
+ D + +FF+ N +V+D +GR G YV+F D+ET + ALQ
Sbjct: 185 RSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETVQKALQ 233
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 21 RQEMDWKLQHTGIVE--GKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKE 78
+ E D + + G V+ +++ F G + N +T++ D F+G P G AY++F DKE
Sbjct: 162 KMEADARSIYVGNVDYGATAEELEAHFHGCGSV-NRVTILCDKFSGHPKGFAYIEFSDKE 220
Query: 79 TAELAL 84
+ +L
Sbjct: 221 SVRTSL 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,501,795,498
Number of Sequences: 23463169
Number of extensions: 101933895
Number of successful extensions: 222380
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 219212
Number of HSP's gapped (non-prelim): 2795
length of query: 141
length of database: 8,064,228,071
effective HSP length: 105
effective length of query: 36
effective length of database: 9,895,562,622
effective search space: 356240254392
effective search space used: 356240254392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)