Your job contains 1 sequence.
>psy3067
MGHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVED
PFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRAPRCETSIPVSS
STHKPGRHHTLDGPNGGGTLS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3067
(141 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-275 - symbol:hnrnph1l "heterogeneous... 257 7.5e-22 1
UNIPROTKB|D6RBM0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 246 6.3e-21 1
ZFIN|ZDB-GENE-060421-3878 - symbol:zgc:136953 "zgc:136953... 232 9.0e-21 2
UNIPROTKB|I3L816 - symbol:HNRNPH1 "Uncharacterized protei... 246 1.7e-20 1
UNIPROTKB|E9PCY7 - symbol:HNRNPH1 "Heterogeneous nuclear ... 246 1.8e-20 1
UNIPROTKB|E2R8D6 - symbol:E2R8D6 "Uncharacterized protein... 246 2.0e-20 1
UNIPROTKB|E5RGV0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 241 2.1e-20 1
UNIPROTKB|P31943 - symbol:HNRNPH1 "Heterogeneous nuclear ... 246 2.2e-20 1
UNIPROTKB|F2Z5H9 - symbol:HNRNPH1 "Uncharacterized protei... 246 2.2e-20 1
MGI|MGI:1891925 - symbol:Hnrnph1 "heterogeneous nuclear r... 246 2.2e-20 1
UNIPROTKB|G3V9Q3 - symbol:Hnrph1 "Heterogeneous nuclear r... 246 2.2e-20 1
UNIPROTKB|E1BF20 - symbol:HNRNPH1 "Uncharacterized protei... 246 2.6e-20 1
UNIPROTKB|G8JLB6 - symbol:HNRNPH1 "Heterogeneous nuclear ... 246 2.6e-20 1
ZFIN|ZDB-GENE-040426-1856 - symbol:hnrnph1 "heterogeneous... 243 2.9e-20 1
UNIPROTKB|F1NBV8 - symbol:HNRNPH1 "Uncharacterized protei... 246 3.0e-20 1
UNIPROTKB|F1NJJ4 - symbol:HNRNPH1 "Uncharacterized protei... 246 3.1e-20 1
UNIPROTKB|F1NJJ5 - symbol:HNRNPH1 "Uncharacterized protei... 246 3.5e-20 1
UNIPROTKB|F1NEG6 - symbol:HNRNPH1 "Uncharacterized protei... 246 3.5e-20 1
UNIPROTKB|P55795 - symbol:HNRNPH2 "Heterogeneous nuclear ... 242 6.0e-20 1
UNIPROTKB|A5D9B4 - symbol:HNRPH2 "Heterogeneous nuclear r... 242 6.0e-20 1
UNIPROTKB|Q3SZF3 - symbol:HNRNPH2 "Heterogeneous nuclear ... 242 6.0e-20 1
UNIPROTKB|E2RJH5 - symbol:HNRNPH2 "Uncharacterized protei... 242 6.0e-20 1
RGD|620840 - symbol:Hnrph1 "heterogeneous nuclear ribonuc... 242 6.0e-20 1
UNIPROTKB|Q8VHV7 - symbol:Hnrnph1 "Heterogeneous nuclear ... 242 6.0e-20 1
MGI|MGI:1201779 - symbol:Hnrnph2 "heterogeneous nuclear r... 242 6.0e-20 1
RGD|1549784 - symbol:Hnrnph2 "heterogeneous nuclear ribon... 242 6.0e-20 1
UNIPROTKB|E2RB90 - symbol:HNRNPF "Uncharacterized protein... 237 1.6e-19 1
UNIPROTKB|F1RG16 - symbol:HNRNPF "Uncharacterized protein... 237 1.6e-19 1
MGI|MGI:2138741 - symbol:Hnrnpf "heterogeneous nuclear ri... 237 1.6e-19 1
RGD|620366 - symbol:Hnrnpf "heterogeneous nuclear ribonuc... 237 1.6e-19 1
UNIPROTKB|P52597 - symbol:HNRNPF "Heterogeneous nuclear r... 237 1.6e-19 1
UNIPROTKB|Q60HC3 - symbol:HNRNPF "Heterogeneous nuclear r... 237 1.6e-19 1
UNIPROTKB|Q5E9J1 - symbol:HNRNPF "Heterogeneous nuclear r... 236 2.0e-19 1
UNIPROTKB|G3N1Y9 - symbol:G3N1Y9 "Uncharacterized protein... 232 6.4e-19 1
UNIPROTKB|E5RGH4 - symbol:HNRNPH1 "Heterogeneous nuclear ... 218 5.8e-18 1
UNIPROTKB|I3LFQ0 - symbol:HNRNPH3 "Uncharacterized protei... 207 8.6e-17 1
UNIPROTKB|E1BB17 - symbol:HNRNPH3 "Uncharacterized protei... 207 1.7e-16 1
UNIPROTKB|F1P8D3 - symbol:HNRNPH3 "Uncharacterized protei... 207 1.7e-16 1
UNIPROTKB|P31942 - symbol:HNRNPH3 "Heterogeneous nuclear ... 207 1.7e-16 1
RGD|1310019 - symbol:Hnrnph3 "heterogeneous nuclear ribon... 207 1.7e-16 1
UNIPROTKB|Q5F3D2 - symbol:HNRNPH3 "Uncharacterized protei... 204 3.5e-16 1
UNIPROTKB|F1LV61 - symbol:F1LV61 "Uncharacterized protein... 193 4.2e-16 2
UNIPROTKB|I3L5T6 - symbol:I3L5T6 "Uncharacterized protein... 194 9.2e-15 1
UNIPROTKB|E7EN40 - symbol:HNRNPH1 "Heterogeneous nuclear ... 185 1.8e-14 1
UNIPROTKB|E1BMP6 - symbol:E1BMP6 "Uncharacterized protein... 190 2.6e-14 1
UNIPROTKB|I3L687 - symbol:HNRNPH2 "Uncharacterized protei... 178 5.9e-13 1
UNIPROTKB|F1Q0B7 - symbol:GRSF1 "Uncharacterized protein"... 149 2.8e-10 1
UNIPROTKB|F1LRK4 - symbol:Grsf1 "Protein Grsf1" species:1... 151 3.4e-10 1
UNIPROTKB|A6QPB2 - symbol:GRSF1 "Uncharacterized protein"... 150 4.4e-10 1
UNIPROTKB|F1MZF0 - symbol:GRSF1 "Uncharacterized protein"... 150 5.5e-10 1
UNIPROTKB|F1LMB8 - symbol:Grsf1 "Protein Grsf1" species:1... 151 6.0e-10 1
UNIPROTKB|F5H5I6 - symbol:GRSF1 "G-rich sequence factor 1... 148 7.4e-10 1
UNIPROTKB|F1RUP2 - symbol:GRSF1 "Uncharacterized protein"... 150 7.7e-10 1
UNIPROTKB|H0Y8R1 - symbol:GRSF1 "G-rich sequence factor 1... 148 9.9e-10 1
UNIPROTKB|H0YAK1 - symbol:GRSF1 "G-rich sequence factor 1... 148 1.2e-09 1
MGI|MGI:106479 - symbol:Grsf1 "G-rich RNA sequence bindin... 148 1.3e-09 1
UNIPROTKB|Q12849 - symbol:GRSF1 "G-rich sequence factor 1... 148 1.3e-09 1
UNIPROTKB|E5RI26 - symbol:ESRP1 "Epithelial-splicing regu... 132 7.6e-09 1
UNIPROTKB|H0YB39 - symbol:HNRNPH1 "Heterogeneous nuclear ... 135 1.0e-08 1
ZFIN|ZDB-GENE-060825-196 - symbol:grsf1 "G-rich RNA seque... 136 1.9e-08 1
TAIR|locus:2156897 - symbol:AT5G66010 species:3702 "Arabi... 110 2.1e-08 2
MGI|MGI:1924661 - symbol:Esrp2 "epithelial splicing regul... 139 2.2e-08 1
UNIPROTKB|F1MSN9 - symbol:ESRP2 "Uncharacterized protein"... 138 2.8e-08 1
UNIPROTKB|F1PA85 - symbol:ESRP2 "Uncharacterized protein"... 138 2.8e-08 1
UNIPROTKB|F1P509 - symbol:ESRP1 "Uncharacterized protein"... 136 2.9e-08 1
UNIPROTKB|Q9H6T0 - symbol:ESRP2 "Epithelial splicing regu... 137 3.6e-08 1
UNIPROTKB|Q6DEZ7 - symbol:esrp1 "Epithelial splicing regu... 135 5.5e-08 1
UNIPROTKB|Q7ZY29 - symbol:esrp1 "Epithelial splicing regu... 135 5.5e-08 1
UNIPROTKB|Q5ZLR4 - symbol:ESRP2 "Epithelial splicing regu... 135 5.7e-08 1
UNIPROTKB|H0YBR2 - symbol:ESRP1 "Epithelial-splicing regu... 132 7.4e-08 1
UNIPROTKB|F1PQY5 - symbol:ESRP1 "Uncharacterized protein"... 132 7.8e-08 1
UNIPROTKB|H0YBB3 - symbol:ESRP1 "Epithelial-splicing regu... 132 7.8e-08 1
ZFIN|ZDB-GENE-030131-9824 - symbol:esrp2 "epithelial spli... 129 8.7e-08 2
UNIPROTKB|F1MVN3 - symbol:ESRP1 "Uncharacterized protein"... 133 8.8e-08 1
UNIPROTKB|G3V8M2 - symbol:Esrp2 "Epithelial-splicing regu... 133 9.6e-08 1
UNIPROTKB|F1PSN8 - symbol:ESRP1 "Uncharacterized protein"... 132 1.0e-07 1
FB|FBgn0023441 - symbol:fus "fusilli" species:7227 "Droso... 134 1.1e-07 1
RGD|1560481 - symbol:Esrp1 "epithelial splicing regulator... 132 1.1e-07 1
MGI|MGI:1917326 - symbol:Esrp1 "epithelial splicing regul... 132 1.1e-07 1
UNIPROTKB|Q6NXG1 - symbol:ESRP1 "Epithelial splicing regu... 132 1.1e-07 1
UNIPROTKB|F1LP81 - symbol:Esrp1 "Epithelial-splicing regu... 132 1.1e-07 1
FB|FBgn0259139 - symbol:glo "glorund" species:7227 "Droso... 131 1.2e-07 1
UNIPROTKB|F1RY52 - symbol:ESRP1 "Uncharacterized protein"... 132 1.2e-07 1
RGD|1310855 - symbol:Esrp2 "epithelial splicing regulator... 132 1.2e-07 1
WB|WBGene00006367 - symbol:sym-2 species:6239 "Caenorhabd... 119 1.4e-07 2
UNIPROTKB|B4DHY1 - symbol:HNRNPH3 "cDNA FLJ57726, highly ... 103 1.5e-07 2
WB|WBGene00020936 - symbol:hrpf-1 species:6239 "Caenorhab... 129 1.8e-07 1
ZFIN|ZDB-GENE-070112-1732 - symbol:esrp1 "epithelial spli... 127 4.2e-07 1
WB|WBGene00022253 - symbol:hrpf-2 species:6239 "Caenorhab... 125 5.5e-07 1
UNIPROTKB|D6RIU0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 114 6.1e-07 1
UNIPROTKB|F1NWS6 - symbol:GRSF1 "Uncharacterized protein"... 118 1.7e-06 1
UNIPROTKB|D6RFM3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6R9T0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RAM1 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RDL0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RDU3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RIT2 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RJ04 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|E7EQJ0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.1e-06 1
UNIPROTKB|D6RIH9 - symbol:HNRNPH1 "Heterogeneous nuclear ... 109 2.2e-06 1
WARNING: Descriptions of 11 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-275 [details] [associations]
symbol:hnrnph1l "heterogeneous nuclear
ribonucleoprotein H1, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-275
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC044161 IPI:IPI00512644 RefSeq:NP_997754.1
UniGene:Dr.782 ProteinModelPortal:Q803W8 SMR:Q803W8 STRING:Q803W8
PRIDE:Q803W8 GeneID:321556 KEGG:dre:321556 CTD:321556
InParanoid:Q803W8 NextBio:20807425 ArrayExpress:Q803W8 Bgee:Q803W8
Uniprot:Q803W8
Length = 407
Score = 257 (95.5 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 68/146 (46%), Positives = 82/146 (56%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI----VEG-------------KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG EG K++I QFF GLEI+ NG
Sbjct: 77 RYVEVFKSNNVEMDWVLKHTGPNCPETEGDGLVRLRGLPFGCSKEEIVQFFSGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAPRC 112
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 137 ITLPVD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPR 195
Query: 113 ETSIPVSSSTHKPGRHHTLDGPNGGG 138
+ +PG + D P+GGG
Sbjct: 196 K-----GMGMQRPGPY---DRPSGGG 213
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/83 (32%), Positives = 50/83 (60%)
Query: 39 DDIAQFFDGLEIISNGITL-VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+++++FF G +I SNG + GRP+GEA+V+ ++ ++A++K +E +GHRY+
Sbjct: 21 EEVSRFFSGCKISSNGSAIHFTYTREGRPSGEAFVELESEDDLKIAVKKDRESMGHRYVE 80
Query: 97 FFTGHR----YTVQHRAPRC-ET 114
F + + ++H P C ET
Sbjct: 81 VFKSNNVEMDWVLKHTGPNCPET 103
>UNIPROTKB|D6RBM0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HOGENOM:HOG000220896 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 IPI:IPI00964535 ProteinModelPortal:D6RBM0
SMR:D6RBM0 Ensembl:ENST00000505811 ArrayExpress:D6RBM0 Bgee:D6RBM0
Uniprot:D6RBM0
Length = 212
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>ZFIN|ZDB-GENE-060421-3878 [details] [associations]
symbol:zgc:136953 "zgc:136953" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060421-3878 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:BX530068 IPI:IPI00485717 UniGene:Dr.76052
Ensembl:ENSDART00000057651 Ensembl:ENSDART00000113082
Uniprot:B8A5E1
Length = 396
Score = 232 (86.7 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 58/120 (48%), Positives = 71/120 (59%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVE--GK---------------KDDIAQFFDGLEIISNG 54
RYIEVF+ R EMDW L+ +G + G K++I QFF GL+I+ NG
Sbjct: 78 RYIEVFRSNRSEMDWVLKRSGPTDYDGSSGCMLRLRGLPFGCSKEEIVQFFSGLKIVPNG 137
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ--HRAPR 111
ITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI F R ++ + PR
Sbjct: 138 ITLPMD-YQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEMRAYYEVPR 196
Score = 107 (42.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 38 KDDIAQFFDGLEIIS--NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
++++A FF +I+ NG+ GRP+GEA+V+ E + AL K ++ +GHRY
Sbjct: 21 QEEVASFFSDCDIVGKVNGVCFTFSK-EGRPSGEAFVELKSSEDFKKALAKDRKYMGHRY 79
Query: 96 I-FFTGHR 102
I F +R
Sbjct: 80 IEVFRSNR 87
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ D+A FF L + I + P NG+ TGEA V+F E A A+ K K + HRYI
Sbjct: 303 ESDVAHFFGPLTPVRVHIDM--GP-NGKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYI 358
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+FK R EM
Sbjct: 173 IGHRYIEIFKSSRNEM 188
Score = 34 (17.0 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 125 PGRHHTLDGPNGGGT 139
P R H GPNG T
Sbjct: 315 PVRVHIDMGPNGKST 329
>UNIPROTKB|I3L816 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU915704
Ensembl:ENSSSCT00000031735 Uniprot:I3L816
Length = 423
Score = 246 (91.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 80 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 139
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 140 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 196
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 24 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 82
>UNIPROTKB|E9PCY7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 IPI:IPI00908896
ProteinModelPortal:E9PCY7 SMR:E9PCY7 PRIDE:E9PCY7
Ensembl:ENST00000510411 ArrayExpress:E9PCY7 Bgee:E9PCY7
Uniprot:E9PCY7
Length = 429
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E2R8D6 [details] [associations]
symbol:E2R8D6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AAEX03007686
Ensembl:ENSCAFT00000000520 Uniprot:E2R8D6
Length = 439
Score = 246 (91.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E5RGV0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00974526
ProteinModelPortal:E5RGV0 SMR:E5RGV0 Ensembl:ENST00000519056
ArrayExpress:E5RGV0 Bgee:E5RGV0 Uniprot:E5RGV0
Length = 155
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 62/126 (49%), Positives = 72/126 (57%)
Query: 4 CRTGEVSDRYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFD 46
C EV R+ VFK EMDW L+HTG + G K++I QFF
Sbjct: 22 CSADEVQ-RFFSVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFS 80
Query: 47 GLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTV 105
GLEI+ NGITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V
Sbjct: 81 GLEIVPNGITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEV 139
Query: 106 Q-HRAP 110
+ H P
Sbjct: 140 RTHYDP 145
>UNIPROTKB|P31943 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0043484 "regulation of RNA splicing" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0008266 "poly(U) RNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008266 GO:GO:0000166
GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0043484
GO:GO:0000398 GO:GO:0071013 EMBL:CH471165 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557 EMBL:L22009 EMBL:CR456778
EMBL:AK124530 EMBL:BC001348 IPI:IPI00013881 PIR:I39358
RefSeq:NP_001244222.1 RefSeq:NP_005511.1 UniGene:Hs.604001 PDB:2LXU
PDBsum:2LXU ProteinModelPortal:P31943 SMR:P31943 IntAct:P31943
MINT:MINT-1160934 STRING:P31943 PhosphoSite:P31943 DMDM:1710632
REPRODUCTION-2DPAGE:IPI00013881 REPRODUCTION-2DPAGE:P31943
PaxDb:P31943 PRIDE:P31943 Ensembl:ENST00000356731
Ensembl:ENST00000393432 Ensembl:ENST00000442819 GeneID:3187
KEGG:hsa:3187 UCSC:uc003mke.4 CTD:3187 GeneCards:GC05M179043
HGNC:HGNC:5041 HPA:HPA001359 HPA:HPA016884 MIM:601035
neXtProt:NX_P31943 PharmGKB:PA162391284 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 GenomeRNAi:3187 NextBio:12670 ArrayExpress:P31943
Bgee:P31943 CleanEx:HS_HNRNPH1 Genevestigator:P31943
GermOnline:ENSG00000169045 InterPro:IPR012996 Pfam:PF08080
Uniprot:P31943
Length = 449
Score = 246 (91.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|F2Z5H9 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0071013 GeneTree:ENSGT00620000087736 CTD:3187
KO:K12898 InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:CU915704
RefSeq:XP_003123691.1 UniGene:Ssc.13767 ProteinModelPortal:F2Z5H9
SMR:F2Z5H9 PRIDE:F2Z5H9 Ensembl:ENSSSCT00000015317 GeneID:100519535
KEGG:ssc:100519535 Uniprot:F2Z5H9
Length = 449
Score = 246 (91.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>MGI|MGI:1891925 [details] [associations]
symbol:Hnrnph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1891925 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 CTD:3187 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080 EMBL:Y14196
EMBL:BC056224 IPI:IPI00133916 RefSeq:NP_067485.1 UniGene:Mm.21740
ProteinModelPortal:O35737 SMR:O35737 IntAct:O35737 STRING:O35737
PhosphoSite:O35737 REPRODUCTION-2DPAGE:IPI00133916
REPRODUCTION-2DPAGE:O35737 PaxDb:O35737 PRIDE:O35737 DNASU:59013
Ensembl:ENSMUST00000069304 Ensembl:ENSMUST00000109142 GeneID:59013
KEGG:mmu:59013 NextBio:314564 Bgee:O35737 Genevestigator:O35737
GermOnline:ENSMUSG00000007850 Uniprot:O35737
Length = 449
Score = 246 (91.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|G3V9Q3 [details] [associations]
symbol:Hnrph1 "Heterogeneous nuclear ribonucleoprotein H1,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0043484 "regulation of RNA
splicing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:CH473948
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
UniGene:Rn.23677 ProteinModelPortal:G3V9Q3 SMR:G3V9Q3 PRIDE:G3V9Q3
Ensembl:ENSRNOT00000059190 Uniprot:G3V9Q3
Length = 449
Score = 246 (91.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E1BF20 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:DAAA02018972
IPI:IPI00734138 Ensembl:ENSBTAT00000012357 Uniprot:E1BF20
Length = 472
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|G8JLB6 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 ProteinModelPortal:G8JLB6
SMR:G8JLB6 PRIDE:G8JLB6 Ensembl:ENST00000329433 OMA:FSECKIQ
PhylomeDB:G8JLB6 Bgee:G8JLB6 Uniprot:G8JLB6
Length = 472
Score = 246 (91.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>ZFIN|ZDB-GENE-040426-1856 [details] [associations]
symbol:hnrnph1 "heterogeneous nuclear
ribonucleoprotein H1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1856 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 CTD:3187 KO:K12898 InterPro:IPR012996
Pfam:PF08080 EMBL:CU855621 EMBL:CU658205 EMBL:BC065439
IPI:IPI00489200 RefSeq:NP_991247.1 UniGene:Dr.17640 SMR:Q6P0V0
Ensembl:ENSDART00000059918 GeneID:402984 KEGG:dre:402984
NextBio:20816791 Uniprot:Q6P0V0
Length = 403
Score = 243 (90.6 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 61/119 (51%), Positives = 73/119 (61%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG----------IVE--G-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG +V G K++I QFF GLEI+ NG
Sbjct: 77 RYVEVFKSNSVEMDWVLKHTGPNCPETGGDGLVRLRGLPFGCSKEEIVQFFAGLEIVPNG 136
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAPR 111
ITL D F GR TGEA+VQF ++ AE AL+KHKERIGHRYI F R V+ H P+
Sbjct: 137 ITLPVD-FQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQ 194
Score = 133 (51.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I SNG T + + GRP+GEA+V+F +E ++A++K +E +GHRY+
Sbjct: 21 DEVQRFFSECKIASNG-TSIHFTYTREGRPSGEAFVEFESEEDLKIAVKKDRETMGHRYV 79
Query: 97 -FFTGHR----YTVQHRAPRC-ET 114
F + + ++H P C ET
Sbjct: 80 EVFKSNSVEMDWVLKHTGPNCPET 103
>UNIPROTKB|F1NBV8 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00589313
Ensembl:ENSGALT00000009575 ArrayExpress:F1NBV8 Uniprot:F1NBV8
Length = 492
Score = 246 (91.7 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 111 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 170
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 171 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 227
Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 55 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 113
>UNIPROTKB|F1NJJ4 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00684493
Ensembl:ENSGALT00000034274 ArrayExpress:F1NJJ4 Uniprot:F1NJJ4
Length = 499
Score = 246 (91.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 111 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 170
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 171 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 227
Score = 108 (43.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 55 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 113
>UNIPROTKB|F1NJJ5 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00679403
Ensembl:ENSGALT00000034273 ArrayExpress:F1NJJ5 Uniprot:F1NJJ5
Length = 519
Score = 246 (91.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 131 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 190
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 191 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 247
Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 75 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 133
>UNIPROTKB|F1NEG6 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 EMBL:AADN02028590
EMBL:AADN02028591 EMBL:AADN02028592 EMBL:AADN02028593
EMBL:AADN02028594 EMBL:AADN02028595 EMBL:AADN02028596
EMBL:AADN02028597 EMBL:AADN02028598 EMBL:AADN02028599
EMBL:AADN02028600 EMBL:AADN02028601 EMBL:AADN02028602
IPI:IPI00823306 Ensembl:ENSGALT00000040330 ArrayExpress:F1NEG6
Uniprot:F1NEG6
Length = 521
Score = 246 (91.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 61/118 (51%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 131 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 190
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 191 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 247
Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I++ GI + GRP+GEA+ + +E +LAL+K +E +GHRY+
Sbjct: 75 EEVQRFFSDCKILNGALGIRFIYTR-EGRPSGEAFAELESEEDVKLALKKDRETMGHRYV 133
>UNIPROTKB|P55795 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0000166 GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 EMBL:U78027 EMBL:AL035422 GO:GO:0000398
EMBL:CH471115 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 HPA:HPA001359 HPA:HPA016884 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:U01923 EMBL:BC130343 EMBL:BC130345 IPI:IPI00026230
RefSeq:NP_001027565.1 RefSeq:NP_062543.1 UniGene:Hs.432485 PDB:1WEZ
PDB:1WG5 PDBsum:1WEZ PDBsum:1WG5 ProteinModelPortal:P55795
SMR:P55795 IntAct:P55795 MINT:MINT-2804293 STRING:P55795
PhosphoSite:P55795 DMDM:2500576 REPRODUCTION-2DPAGE:IPI00026230
PaxDb:P55795 PeptideAtlas:P55795 PRIDE:P55795 DNASU:3188
Ensembl:ENST00000316594 GeneID:3188 KEGG:hsa:3188 UCSC:uc004ehm.3
GeneCards:GC0XP100663 HGNC:HGNC:5042 HPA:CAB004436 MIM:300610
neXtProt:NX_P55795 PharmGKB:PA162391316 InParanoid:P55795
OMA:MEANMTI PhylomeDB:P55795 EvolutionaryTrace:P55795
GenomeRNAi:3188 NextBio:12674 ArrayExpress:P55795 Bgee:P55795
CleanEx:HS_HNRNPH2 Genevestigator:P55795 GermOnline:ENSG00000126945
Uniprot:P55795
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 114 (45.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + + GRP+GEA+V+ +E +LAL+K +E +GHRY+
Sbjct: 25 DEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYV 83
>UNIPROTKB|A5D9B4 [details] [associations]
symbol:HNRPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 IPI:IPI00696405 UniGene:Bt.8355 OMA:MEANMTI
EMBL:DAAA02070773 EMBL:DAAA02070774 EMBL:BT030533 SMR:A5D9B4
Ensembl:ENSBTAT00000009864 InParanoid:A5D9B4 Uniprot:A5D9B4
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|Q3SZF3 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC102894 IPI:IPI00696405 RefSeq:NP_001069476.1
UniGene:Bt.8355 ProteinModelPortal:Q3SZF3 SMR:Q3SZF3 PRIDE:Q3SZF3
GeneID:534001 KEGG:bta:534001 CTD:3188 InParanoid:Q3SZF3
NextBio:20876226 Uniprot:Q3SZF3
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E2RJH5 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736 KO:K12898
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI
EMBL:AAEX03026717 RefSeq:XP_861916.1 RefSeq:XP_862053.2
Ensembl:ENSCAFT00000028063 GeneID:480989 KEGG:cfa:480989
Uniprot:E2RJH5
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>RGD|620840 [details] [associations]
symbol:Hnrph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:620840 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0006396 GO:GO:0043484
eggNOG:NOG262593 HSSP:P55795 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 InterPro:IPR012996 Pfam:PF08080
EMBL:AF367468 EMBL:AABR03073723 EMBL:BC129087 IPI:IPI00202027
IPI:IPI00851133 IPI:IPI00851145 RefSeq:NP_543172.1 UniGene:Rn.23677
ProteinModelPortal:Q8VHV7 SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7
PhosphoSite:Q8VHV7 World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7
GeneID:140931 KEGG:rno:140931 UCSC:RGD:620840 CTD:140931
NextBio:620799 ArrayExpress:Q8VHV7 Genevestigator:Q8VHV7
Uniprot:Q8VHV7
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G +++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|Q8VHV7 [details] [associations]
symbol:Hnrnph1 "Heterogeneous nuclear ribonucleoprotein H"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0006396 GO:GO:0043484 eggNOG:NOG262593 HSSP:P55795
HOGENOM:HOG000220896 HOVERGEN:HBG055557 KO:K12898
InterPro:IPR012996 Pfam:PF08080 EMBL:AF367468 EMBL:AABR03073723
EMBL:BC129087 IPI:IPI00202027 IPI:IPI00851133 IPI:IPI00851145
RefSeq:NP_543172.1 UniGene:Rn.23677 ProteinModelPortal:Q8VHV7
SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7 PhosphoSite:Q8VHV7
World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7 GeneID:140931 KEGG:rno:140931
UCSC:RGD:620840 CTD:140931 NextBio:620799 ArrayExpress:Q8VHV7
Genevestigator:Q8VHV7 Uniprot:Q8VHV7
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G +++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
ITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>MGI|MGI:1201779 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1201779
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:U58105 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:AK077716 EMBL:AK164115 EMBL:AK168116 EMBL:AK169104
EMBL:BC005461 IPI:IPI00108143 RefSeq:NP_063921.1 UniGene:Mm.315909
ProteinModelPortal:P70333 SMR:P70333 STRING:P70333
PhosphoSite:P70333 PaxDb:P70333 PRIDE:P70333 DNASU:56258
Ensembl:ENSMUST00000050331 Ensembl:ENSMUST00000059297
Ensembl:ENSMUST00000074950 Ensembl:ENSMUST00000113202
Ensembl:ENSMUST00000113203 GeneID:56258 KEGG:mmu:56258
InParanoid:P70333 NextBio:312148 Bgee:P70333 Genevestigator:P70333
GermOnline:ENSMUSG00000045427 Uniprot:P70333
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I NG + V + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 EEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>RGD|1549784 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2 (H')"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1549784 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0015629
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593
HSSP:P55795 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI EMBL:BC079240
IPI:IPI00464512 RefSeq:NP_001014041.1 UniGene:Rn.229731
ProteinModelPortal:Q6AY09 SMR:Q6AY09 IntAct:Q6AY09 STRING:Q6AY09
PhosphoSite:Q6AY09 PRIDE:Q6AY09 Ensembl:ENSRNOT00000015518
GeneID:308650 KEGG:rno:308650 UCSC:RGD:1549784 InParanoid:Q6AY09
NextBio:659306 Genevestigator:Q6AY09 Uniprot:Q6AY09
Length = 449
Score = 242 (90.2 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 60/118 (50%), Positives = 71/118 (60%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
+TL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 MTLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 197
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+++ +FF +I NG + V + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 EEVMRFFSDCKI-QNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E2RB90 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0003727 Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0071013
GeneTree:ENSGT00620000087736 KO:K12898 InterPro:IPR012996
Pfam:PF08080 CTD:3185 OMA:SDCTIRD EMBL:AAEX03015383
RefSeq:XP_848697.1 RefSeq:XP_856894.1 RefSeq:XP_856973.1
ProteinModelPortal:E2RB90 Ensembl:ENSCAFT00000011299 GeneID:477757
KEGG:cfa:477757 NextBio:20853178 Uniprot:E2RB90
Length = 414
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
>UNIPROTKB|F1RG16 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
KO:K12898 InterPro:IPR012996 Pfam:PF08080 CTD:3185 OMA:SDCTIRD
EMBL:CU468599 RefSeq:XP_001929089.1 RefSeq:XP_003359253.1
RefSeq:XP_003483523.1 UniGene:Ssc.93755 Ensembl:ENSSSCT00000011169
GeneID:100155475 KEGG:ssc:100155475 Uniprot:F1RG16
Length = 414
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
>MGI|MGI:2138741 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2138741
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0003727
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD ChiTaRS:HNRNPF EMBL:AK076478 EMBL:BC018185
EMBL:BC025481 EMBL:BC027003 EMBL:BC029163 EMBL:BC029764
EMBL:BC033483 EMBL:BC089313 IPI:IPI00226073 IPI:IPI00798511
RefSeq:NP_001159899.1 RefSeq:NP_001159900.1 RefSeq:NP_001159901.1
RefSeq:NP_001159902.1 RefSeq:NP_001159903.1 RefSeq:NP_001159904.1
RefSeq:NP_598595.1 UniGene:Mm.422979 UniGene:Mm.476420 PDB:2DB1
PDBsum:2DB1 ProteinModelPortal:Q9Z2X1 SMR:Q9Z2X1 IntAct:Q9Z2X1
STRING:Q9Z2X1 PhosphoSite:Q9Z2X1 REPRODUCTION-2DPAGE:Q9Z2X1
PaxDb:Q9Z2X1 PRIDE:Q9Z2X1 Ensembl:ENSMUST00000035493
Ensembl:ENSMUST00000163168 Ensembl:ENSMUST00000167182
Ensembl:ENSMUST00000167657 Ensembl:ENSMUST00000170346
Ensembl:ENSMUST00000180020 Ensembl:ENSMUST00000180341 GeneID:98758
KEGG:mmu:98758 UCSC:uc009dle.2 InParanoid:Q9Z2X1
EvolutionaryTrace:Q9Z2X1 NextBio:353639 Bgee:Q9Z2X1
Genevestigator:Q9Z2X1 GermOnline:ENSMUSG00000042079 Uniprot:Q9Z2X1
Length = 415
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 105 (42.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ F I +G+ V + GR +GEA+V+ ++ +LAL+K +E +GHRYI
Sbjct: 25 EDVQNFLSDCTI-HDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYI 83
Query: 97 -FFTGHR----YTVQHRAPRCETS 115
F HR + ++H P S
Sbjct: 84 EVFKSHRTEMDWVLKHSGPNSADS 107
>RGD|620366 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0043484 "regulation of RNA splicing"
evidence=ISO;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:620366 GO:GO:0005634 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HSSP:Q9Z2X1 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:AB022209 EMBL:BC097275 EMBL:BC103634
IPI:IPI00210357 RefSeq:NP_001032362.1 RefSeq:NP_001032363.1
RefSeq:NP_001032364.1 RefSeq:NP_071792.1 UniGene:Rn.144596
ProteinModelPortal:Q794E4 SMR:Q794E4 IntAct:Q794E4 STRING:Q794E4
PhosphoSite:Q794E4 PRIDE:Q794E4 Ensembl:ENSRNOT00000019529
GeneID:64200 KEGG:rno:64200 UCSC:RGD:620366 InParanoid:Q794E4
NextBio:612884 Genevestigator:Q794E4 GermOnline:ENSRNOG00000014562
Uniprot:Q794E4
Length = 415
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 105 (42.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ F I +G+ V + GR +GEA+V+ ++ +LAL+K +E +GHRYI
Sbjct: 25 EDVQNFLSDCTI-HDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYI 83
Query: 97 -FFTGHR----YTVQHRAPRCETS 115
F HR + ++H P S
Sbjct: 84 EVFKSHRTEMDWVLKHSGPNSADS 107
>UNIPROTKB|P52597 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043484 "regulation of RNA splicing" evidence=IDA;IMP]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0000398 GO:GO:0071013
EMBL:CH471160 EMBL:AL512654 HOGENOM:HOG000220896 HOVERGEN:HBG055557
HPA:HPA001359 HPA:HPA016884 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:L28010 EMBL:AK001364 EMBL:BC001432 EMBL:BC004254
EMBL:BC015580 EMBL:BC016736 EMBL:BC106008 IPI:IPI00003881
PIR:S43484 RefSeq:NP_001091674.1 RefSeq:NP_001091675.1
RefSeq:NP_001091676.1 RefSeq:NP_001091677.1 RefSeq:NP_001091678.1
RefSeq:NP_004957.1 UniGene:Hs.712955 UniGene:Hs.808 PDB:2HGL
PDB:2HGM PDB:2HGN PDB:2KFY PDB:2KG0 PDB:2KG1 PDB:3TFY PDBsum:2HGL
PDBsum:2HGM PDBsum:2HGN PDBsum:2KFY PDBsum:2KG0 PDBsum:2KG1
PDBsum:3TFY ProteinModelPortal:P52597 SMR:P52597 IntAct:P52597
MINT:MINT-1157890 STRING:P52597 PhosphoSite:P52597 DMDM:1710628
OGP:P52597 PaxDb:P52597 PeptideAtlas:P52597 PRIDE:P52597 DNASU:3185
Ensembl:ENST00000337970 Ensembl:ENST00000356053
Ensembl:ENST00000357065 Ensembl:ENST00000443950
Ensembl:ENST00000544000 GeneID:3185 KEGG:hsa:3185 UCSC:uc001jar.2
GeneCards:GC10M043881 HGNC:HGNC:5039 MIM:601037 neXtProt:NX_P52597
PharmGKB:PA162391271 InParanoid:P52597 PhylomeDB:P52597
ChiTaRS:HNRNPF EvolutionaryTrace:P52597 GenomeRNAi:3185
NextBio:12654 ArrayExpress:P52597 Bgee:P52597 CleanEx:HS_HNRNPF
Genevestigator:P52597 GermOnline:ENSG00000169813 Uniprot:P52597
Length = 415
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
>UNIPROTKB|Q60HC3 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9541 "Macaca fascicularis" [GO:0003727 "single-stranded RNA
binding" evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HOVERGEN:HBG055557 InterPro:IPR012996 Pfam:PF08080
EMBL:AB125204 EMBL:AB168246 ProteinModelPortal:Q60HC3 SMR:Q60HC3
PRIDE:Q60HC3 Uniprot:Q60HC3
Length = 415
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
>UNIPROTKB|Q5E9J1 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9913 "Bos taurus" [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0003727 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484 HSSP:Q9Z2X1
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 EMBL:BT020929 EMBL:BC102955
IPI:IPI00685278 RefSeq:NP_001014860.1 UniGene:Bt.23170
ProteinModelPortal:Q5E9J1 SMR:Q5E9J1 STRING:Q5E9J1 PRIDE:Q5E9J1
Ensembl:ENSBTAT00000011658 GeneID:506917 KEGG:bta:506917 CTD:3185
eggNOG:NOG326351 InParanoid:Q5E9J1 OMA:SDCTIRD NextBio:20867801
Uniprot:Q5E9J1
Length = 414
Score = 236 (88.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 56/102 (54%), Positives = 65/102 (63%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R EMDW L+H+G + G K++I QFF GLEI+ NG
Sbjct: 81 RYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
ITL DP G+ TGEA+VQF +E AE AL KHKERIGHRYI
Sbjct: 141 ITLPVDP-EGKITGEAFVQFASQELAEKALGKHKERIGHRYI 181
Score = 104 (41.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+D+ F I +G+ V + GR +GEA+V+ ++ +LAL+K +E +GHRYI
Sbjct: 25 EDVQNFLSDCTI-HDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYI 83
Query: 97 -FFTGHR----YTVQHRAP 110
F HR + ++H P
Sbjct: 84 EVFKSHRTEMDWVLKHSGP 102
>UNIPROTKB|G3N1Y9 [details] [associations]
symbol:G3N1Y9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02057210 Ensembl:ENSBTAT00000065958 Uniprot:G3N1Y9
Length = 426
Score = 232 (86.7 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 63/151 (41%), Positives = 80/151 (52%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------IVEG-----------KKDDIAQFFDGLEIISNG 54
RYIEVFK +MDW L+HTG +G K+++ QFF GLEI+ NG
Sbjct: 79 RYIEVFKSNNADMDWVLEHTGPHSPDTASDGFVRLSGLPFGCSKEEMVQFFAGLEIVPNG 138
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRA--PR 111
ITL D R TGEA+V F +E AE+AL+KHKERIG RY+ F R V+ PR
Sbjct: 139 ITLQVD-MQRRSTGEAFVWFASQEIAEMALKKHKERIGRRYMGIFKSSRAEVRSHCDPPR 197
Query: 112 CETSIPVSSSTHKPGR---HHTLDGPNGGGT 139
T++ +PG HH+ G G T
Sbjct: 198 KPTAVVRPGPCDRPGAGGGHHSGKGAGFGRT 228
>UNIPROTKB|E5RGH4 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00982782
ProteinModelPortal:E5RGH4 SMR:E5RGH4 Ensembl:ENST00000521790
ArrayExpress:E5RGH4 Bgee:E5RGH4 Uniprot:E5RGH4
Length = 100
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 52/98 (53%), Positives = 61/98 (62%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 4 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 63
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIG 92
ITL D F GR TGEA+VQF +E AE AL+KHKERIG
Sbjct: 64 ITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIG 100
>UNIPROTKB|I3LFQ0 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 EMBL:FP476068
Ensembl:ENSSSCT00000027886 OMA:NDIANXH Uniprot:I3LFQ0
Length = 216
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 25 DWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D ++ G+ G K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE A
Sbjct: 15 DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGEAFVQFASKEIAENA 73
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ 106
L KHKERIGHRYI F R ++
Sbjct: 74 LGKHKERIGHRYIEIFRSSRSEIK 97
>UNIPROTKB|E1BB17 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
EMBL:DAAA02061815 IPI:IPI00696173 ProteinModelPortal:E1BB17
SMR:E1BB17 PRIDE:E1BB17 Ensembl:ENSBTAT00000019039 Uniprot:E1BB17
Length = 346
Score = 207 (77.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 25 DWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D ++ G+ G K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE A
Sbjct: 15 DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGEAFVQFASKEIAENA 73
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ 106
L KHKERIGHRYI F R ++
Sbjct: 74 LGKHKERIGHRYIEIFRSSRSEIK 97
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+F+ R E+
Sbjct: 81 IGHRYIEIFRSSRSEI 96
>UNIPROTKB|F1P8D3 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
EMBL:AAEX03002774 RefSeq:XP_536369.2 ProteinModelPortal:F1P8D3
Ensembl:ENSCAFT00000000525 GeneID:479227 KEGG:cfa:479227
Uniprot:F1P8D3
Length = 346
Score = 207 (77.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 25 DWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D ++ G+ G K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE A
Sbjct: 15 DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGEAFVQFASKEIAENA 73
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ 106
L KHKERIGHRYI F R ++
Sbjct: 74 LGKHKERIGHRYIEIFRSSRSEIK 97
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+F+ R E+
Sbjct: 81 IGHRYIEIFRSSRSEI 96
>UNIPROTKB|P31942 [details] [associations]
symbol:HNRNPH3 "Heterogeneous nuclear ribonucleoprotein H3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=NAS]
[GO:0003723 "RNA binding" evidence=NAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 EMBL:CH471083
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 GO:GO:0000398
eggNOG:NOG262593 HOVERGEN:HBG055557 KO:K12898 EMBL:L32610
EMBL:AF132360 EMBL:AF132361 EMBL:AF132362 EMBL:AF132363
EMBL:AF132364 EMBL:AK091411 EMBL:AK291547 EMBL:AL117395
EMBL:BC004511 EMBL:BC039824 IPI:IPI00013877 IPI:IPI00216492
IPI:IPI00216493 IPI:IPI00216494 IPI:IPI00216495 IPI:IPI00216496
PIR:T17207 RefSeq:NP_036339.1 RefSeq:NP_067676.2 UniGene:Hs.643472
ProteinModelPortal:P31942 SMR:P31942 IntAct:P31942
MINT:MINT-5004191 STRING:P31942 PhosphoSite:P31942 DMDM:23503095
PaxDb:P31942 PRIDE:P31942 Ensembl:ENST00000265866
Ensembl:ENST00000354695 GeneID:3189 KEGG:hsa:3189 UCSC:uc001jnw.4
UCSC:uc001jnx.4 CTD:3189 GeneCards:GC10P070090 HGNC:HGNC:5043
HPA:HPA038264 MIM:602324 neXtProt:NX_P31942 PharmGKB:PA162391325
InParanoid:P31942 OMA:PYDRPLG OrthoDB:EOG49P9ZV PhylomeDB:P31942
ChiTaRS:HNRNPH3 GenomeRNAi:3189 NextBio:12680 ArrayExpress:P31942
Bgee:P31942 CleanEx:HS_HNRNPH3 Genevestigator:P31942
GermOnline:ENSG00000096746 Uniprot:P31942
Length = 346
Score = 207 (77.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 25 DWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D ++ G+ G K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE A
Sbjct: 15 DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGEAFVQFASKEIAENA 73
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ 106
L KHKERIGHRYI F R ++
Sbjct: 74 LGKHKERIGHRYIEIFRSSRSEIK 97
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+F+ R E+
Sbjct: 81 IGHRYIEIFRSSRSEI 96
>RGD|1310019 [details] [associations]
symbol:Hnrnph3 "heterogeneous nuclear ribonucleoprotein H3
(2H9)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:1310019 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 EMBL:CH473988
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OrthoDB:EOG49P9ZV
IPI:IPI00372854 RefSeq:NP_001102002.1 UniGene:Rn.60652 SMR:D4ABK7
Ensembl:ENSRNOT00000032600 GeneID:361838 KEGG:rno:361838
UCSC:RGD:1310019 NextBio:677788 Uniprot:D4ABK7
Length = 346
Score = 207 (77.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 25 DWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELA 83
D ++ G+ G K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE A
Sbjct: 15 DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMD-YQGRSTGEAFVQFASKEIAENA 73
Query: 84 LQKHKERIGHRYI-FFTGHRYTVQ 106
L KHKERIGHRYI F R ++
Sbjct: 74 LGKHKERIGHRYIEIFRSSRSEIK 97
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 208 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 263
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+F+ R E+
Sbjct: 81 IGHRYIEIFRSSRSEI 96
>UNIPROTKB|Q5F3D2 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:AADN02028014 EMBL:AJ851718 IPI:IPI00573787
RefSeq:NP_001012610.1 UniGene:Gga.22904 SMR:Q5F3D2
Ensembl:ENSGALT00000006294 GeneID:423686 KEGG:gga:423686
InParanoid:Q5F3D2 NextBio:20826120 Uniprot:Q5F3D2
Length = 342
Score = 204 (76.9 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 41/59 (69%), Positives = 46/59 (77%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K++I QFF GLEI+ NGITL D + GR TGEA+VQF KE AE AL KHKERIGHRYI
Sbjct: 31 KEEIVQFFQGLEIVPNGITLTLD-YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYI 88
Score = 103 (41.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 211 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNHMQHRYI 266
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 9 VSDRYIEVFKVRRQEM 24
+ RYIE+FK + E+
Sbjct: 83 IGHRYIEIFKSSKSEI 98
>UNIPROTKB|F1LV61 [details] [associations]
symbol:F1LV61 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
IPI:IPI00952226 ProteinModelPortal:F1LV61
Ensembl:ENSRNOT00000020819 Uniprot:F1LV61
Length = 408
Score = 193 (73.0 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 56/135 (41%), Positives = 71/135 (52%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG------------IVEG-----KKDDIAQFFDGLEIISNG 54
RYIEVFK R MDW L+ +G ++G K++ QFF GLEI+ NG
Sbjct: 82 RYIEVFKPHRTGMDWVLKRSGPNSAYSANDGFVSLQGLPCGCTKEEAIQFFSGLEIVPNG 141
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAPRC 112
TL G+ TGEA+VQF +E AE A KHKERIGHRYI F + V+ H P
Sbjct: 142 NTLPVY-LEGKITGEAFVQFASQELAEKAFGKHKERIGHRYIEVFKSSQEEVRSHSDPPL 200
Query: 113 E-TSIPVSSSTHKPG 126
+ S+ +PG
Sbjct: 201 KFMSVQRPGPYDRPG 215
Score = 33 (16.7 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 125 PGRHHTLDGPNG 136
P R HT GP+G
Sbjct: 314 PVRVHTEIGPDG 325
>UNIPROTKB|I3L5T6 [details] [associations]
symbol:I3L5T6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU633293
Ensembl:ENSSSCT00000028833 Uniprot:I3L5T6
Length = 413
Score = 194 (73.4 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 57/147 (38%), Positives = 73/147 (49%)
Query: 7 GEVSDRYIEVFKVRRQEMDWKLQHT----------------GIVEG-KKDDIAQFFDGLE 49
G + +Y EVFK R EMDW L+H+ G++ G K+ I QFF GLE
Sbjct: 75 GSMGHQYTEVFKSHRTEMDWMLKHSCPKSADNANDGFVWLQGLLFGCTKEKIIQFFSGLE 134
Query: 50 IISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYIFFTGHRYTVQHRA 109
I+ ITL D G+ TGEA+VQF +E AE AL KERIGHRYI +
Sbjct: 135 IMPIWITLPMD-LEGKITGEAFVQFTSQELAEKALGDRKERIGHRYI----EVFKSSWEE 189
Query: 110 PRCETSIPVSSSTHKPGRHHTLDGPNG 136
R + P+ + + G L GP G
Sbjct: 190 VRSYSDPPLKFMSMQQGPMTDLAGPGG 216
>UNIPROTKB|E7EN40 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00981333
ProteinModelPortal:E7EN40 SMR:E7EN40 Ensembl:ENST00000523137
ArrayExpress:E7EN40 Bgee:E7EN40 Uniprot:E7EN40
Length = 166
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 41/70 (58%), Positives = 49/70 (70%)
Query: 43 QFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGH 101
++ +GLEI+ NGITL D F GR TGEA+VQF +E AE AL+KHKERIGHRYI F
Sbjct: 81 RYVEGLEIVPNGITLPVD-FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 139
Query: 102 RYTVQ-HRAP 110
R V+ H P
Sbjct: 140 RAEVRTHYDP 149
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E1BMP6 [details] [associations]
symbol:E1BMP6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
EMBL:DAAA02072842 IPI:IPI00699769 ProteinModelPortal:E1BMP6
Ensembl:ENSBTAT00000027332 Uniprot:E1BMP6
Length = 415
Score = 190 (71.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 50/101 (49%), Positives = 60/101 (59%)
Query: 13 YIEVFKVRRQEMDWKLQHTGIVEGKK----------------DDIAQFFDGLEIISNGIT 56
YIEVFK R EM+ L+H+G G +DI QFF GLEI+ N IT
Sbjct: 84 YIEVFKSHRTEMELVLKHSGPNSGDSSSDGFVRLRGLPFGCTEDIIQFFSGLEIMPNRIT 143
Query: 57 LVEDPFNGRPTGEAYVQFVDKETAELALQKHKERI-GHRYI 96
L DP G+ TGEA+VQF +E AE AL K+K+RI GHRYI
Sbjct: 144 LPVDP-EGKTTGEAFVQFASQELAEKALGKNKKRIIGHRYI 183
>UNIPROTKB|I3L687 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:MEANMTI
Ensembl:ENSSSCT00000030700 Uniprot:I3L687
Length = 437
Score = 178 (67.7 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 52/118 (44%), Positives = 62/118 (52%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGI------------VEG-----KKDDIAQFFDGLEIISNG 54
RY+EVFK EMDW L+HTG + G K++I QFF GLEI+ NG
Sbjct: 81 RYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 140
Query: 55 ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
EA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 141 X-------------EAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 185
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVMRFFSDCKI-QNGTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|F1Q0B7 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 EMBL:AAEX03009136
Ensembl:ENSCAFT00000004672 OMA:GESEMAN Uniprot:F1Q0B7
Length = 281
Score = 149 (57.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 49/134 (36%), Positives = 66/134 (49%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ + G+V G + DI FF GL I+
Sbjct: 18 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 77
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 78 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVG 135
Query: 111 RCETSIPVSSSTHK 124
+ SS T K
Sbjct: 136 SHKGKKMASSPTAK 149
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E NG+ TGEA V F E A A+ K + + HR
Sbjct: 212 QANAQDIINFFAPLKPVR--ITM-EYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHR 268
Query: 95 YI 96
YI
Sbjct: 269 YI 270
Score = 62 (26.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 114 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 141
>UNIPROTKB|F1LRK4 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 GeneTree:ENSGT00620000087736
IPI:IPI00364208 PRIDE:F1LRK4 Ensembl:ENSRNOT00000004551
ArrayExpress:F1LRK4 Uniprot:F1LRK4
Length = 361
Score = 151 (58.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/134 (37%), Positives = 66/134 (49%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ G+V G + DI FF GL I+
Sbjct: 98 MGQRYVEVYEINNEDVDALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIVDFFAGLNIV 157
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 158 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVG 215
Query: 111 RCETSIPVSSSTHK 124
+ VSS T K
Sbjct: 216 SHKGKKMVSSPTTK 229
Score = 82 (33.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 292 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHR 348
Query: 95 YI 96
YI
Sbjct: 349 YI 350
Score = 62 (26.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 194 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 221
>UNIPROTKB|A6QPB2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 OrthoDB:EOG4XPQGW GeneTree:ENSGT00620000087736
EMBL:DAAA02018025 EMBL:DAAA02018026 EMBL:BC149233 IPI:IPI00705255
UniGene:Bt.53639 SMR:A6QPB2 Ensembl:ENSBTAT00000039551
Uniprot:A6QPB2
Length = 362
Score = 150 (57.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 45/116 (38%), Positives = 60/116 (51%)
Query: 9 VSDRYIEVFKVRRQEMD--WKLQHT--------GIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D K H G+V G + DI FF GL I+
Sbjct: 99 MGQRYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 158
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 159 D--ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 82 (33.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 293 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHR 349
Query: 95 YI 96
YI
Sbjct: 350 YI 351
Score = 62 (26.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 195 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 222
>UNIPROTKB|F1MZF0 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:DAAA02018025 EMBL:DAAA02018026 IPI:IPI00700446
Ensembl:ENSBTAT00000011313 ArrayExpress:F1MZF0 Uniprot:F1MZF0
Length = 399
Score = 150 (57.9 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 45/116 (38%), Positives = 60/116 (51%)
Query: 9 VSDRYIEVFKVRRQEMD--WKLQHT--------GIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D K H G+V G + DI FF GL I+
Sbjct: 136 MGQRYVEVYEINNEDVDALMKSLHVKSAPMVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 195
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 196 D--ITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 249
Score = 82 (33.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 330 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHR 386
Query: 95 YI 96
YI
Sbjct: 387 YI 388
Score = 62 (26.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 232 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 259
>UNIPROTKB|F1LMB8 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 OMA:LSFFSDC IPI:IPI00949228
PRIDE:F1LMB8 Ensembl:ENSRNOT00000065436 ArrayExpress:F1LMB8
Uniprot:F1LMB8
Length = 479
Score = 151 (58.2 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 50/134 (37%), Positives = 66/134 (49%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ G+V G + DI FF GL I+
Sbjct: 216 MGQRYVEVYEINNEDVDALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIVDFFAGLNIV 275
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 276 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVG 333
Query: 111 RCETSIPVSSSTHK 124
+ VSS T K
Sbjct: 334 SHKGKKMVSSPTTK 347
Score = 82 (33.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 410 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHR 466
Query: 95 YI 96
YI
Sbjct: 467 YI 468
Score = 62 (26.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 312 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 339
>UNIPROTKB|F5H5I6 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
IPI:IPI00979483 ProteinModelPortal:F5H5I6 SMR:F5H5I6 PRIDE:F5H5I6
Ensembl:ENST00000545193 UCSC:uc011caz.1 ArrayExpress:F5H5I6
Bgee:F5H5I6 Uniprot:F5H5I6
Length = 362
Score = 148 (57.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ + G+V G + DI FF GL I+
Sbjct: 99 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 158
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 159 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
>UNIPROTKB|F1RUP2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:FP325194 RefSeq:XP_003129120.1 UniGene:Ssc.12808
Ensembl:ENSSSCT00000009793 GeneID:100516986 KEGG:ssc:100516986
Uniprot:F1RUP2
Length = 479
Score = 150 (57.9 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 49/134 (36%), Positives = 65/134 (48%)
Query: 9 VSDRYIEVFKVRRQEMD--WKLQHT--------GIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D K H G+V G + DI FF GL I+
Sbjct: 216 MGQRYVEVYEINNEDVDALMKNLHVKSTPVVNDGVVRLRGLPYSCNEKDIVDFFAGLHIV 275
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 276 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVG 333
Query: 111 RCETSIPVSSSTHK 124
+ SS T K
Sbjct: 334 SHKGKKMASSPTAK 347
Score = 83 (34.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 410 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHR 466
Query: 95 YI 96
YI
Sbjct: 467 YI 468
Score = 62 (26.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 312 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 339
>UNIPROTKB|H0Y8R1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
PRIDE:H0Y8R1 Ensembl:ENST00000514161 Bgee:H0Y8R1 Uniprot:H0Y8R1
Length = 417
Score = 148 (57.2 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ + G+V G + DI FF GL I+
Sbjct: 154 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 213
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 214 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 267
>UNIPROTKB|H0YAK1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
OMA:LSFFSDC PRIDE:H0YAK1 Ensembl:ENST00000499044 Bgee:H0YAK1
Uniprot:H0YAK1
Length = 453
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ + G+V G + DI FF GL I+
Sbjct: 190 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 249
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 250 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 303
>MGI|MGI:106479 [details] [associations]
symbol:Grsf1 "G-rich RNA sequence binding factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:106479 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016331 CTD:2926
eggNOG:NOG319259 HOGENOM:HOG000220896 HOVERGEN:HBG055557
OrthoDB:EOG4XPQGW EMBL:AK044889 EMBL:AK045986 EMBL:AK077782
IPI:IPI00453582 RefSeq:NP_848815.2 UniGene:Mm.332474
ProteinModelPortal:Q8C5Q4 SMR:Q8C5Q4 STRING:Q8C5Q4
PhosphoSite:Q8C5Q4 PaxDb:Q8C5Q4 PRIDE:Q8C5Q4 DNASU:231413
Ensembl:ENSMUST00000078945 GeneID:231413 KEGG:mmu:231413
UCSC:uc008yab.1 GeneTree:ENSGT00620000087736 InParanoid:Q8C5Q4
OMA:LSFFSDC NextBio:380544 Bgee:Q8C5Q4 CleanEx:MM_GRSF1
Genevestigator:Q8C5Q4 GermOnline:ENSMUSG00000044221 Uniprot:Q8C5Q4
Length = 479
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/137 (35%), Positives = 67/137 (48%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ G+V G + DI FF GL I+
Sbjct: 216 MGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIV 275
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ---- 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 276 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVG 333
Query: 107 -HRAPRCETSIPVSSST 122
H+ + +S P T
Sbjct: 334 SHKGKKMTSSPPTKYIT 350
Score = 82 (33.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DI FF L+ + IT+ E +G+ TGEA V F E A A+ K + + HR
Sbjct: 410 QANAQDIINFFAPLKPVR--ITM-EYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHR 466
Query: 95 YI 96
YI
Sbjct: 467 YI 468
Score = 62 (26.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQHTGIVEGKK 38
E+ +RYIE+F RR E+ H G +GKK
Sbjct: 312 EIGNRYIEIFPSRRNEVR---THVGSHKGKK 339
>UNIPROTKB|Q12849 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378
"mRNA polyadenylation" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006378 EMBL:CH471057
GO:GO:0016331 EMBL:U07231 EMBL:AK056891 EMBL:AK090755 EMBL:AK094806
EMBL:AK095799 EMBL:AK097055 EMBL:AK127161 EMBL:AC021989
EMBL:BC040485 IPI:IPI00478657 IPI:IPI00914953 PIR:S48081
RefSeq:NP_001091947.1 RefSeq:NP_002083.3 UniGene:Hs.309763 PDB:2LMI
PDBsum:2LMI ProteinModelPortal:Q12849 SMR:Q12849 IntAct:Q12849
STRING:Q12849 PhosphoSite:Q12849 DMDM:215274142 PaxDb:Q12849
PRIDE:Q12849 Ensembl:ENST00000254799 Ensembl:ENST00000439371
Ensembl:ENST00000502323 GeneID:2926 KEGG:hsa:2926 UCSC:uc003hfs.2
CTD:2926 GeneCards:GC04M071681 HGNC:HGNC:4610 HPA:HPA036985
MIM:604851 neXtProt:NX_Q12849 PharmGKB:PA29003 eggNOG:NOG319259
HOGENOM:HOG000220896 HOVERGEN:HBG055557 InParanoid:Q12849
OrthoDB:EOG4XPQGW ChiTaRS:GRSF1 GenomeRNAi:2926 NextBio:11601
ArrayExpress:Q12849 Bgee:Q12849 CleanEx:HS_GRSF1
Genevestigator:Q12849 GermOnline:ENSG00000132463 Uniprot:Q12849
Length = 480
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 9 VSDRYIEVFKVRRQEMDW---KLQ-------HTGIVE--G-----KKDDIAQFFDGLEII 51
+ RY+EV+++ +++D LQ + G+V G + DI FF GL I+
Sbjct: 217 MGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIV 276
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ 106
IT V D R TGEAYVQF + E A AL KH+E IG+RYI F R V+
Sbjct: 277 D--ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
>UNIPROTKB|E5RI26 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 IPI:IPI00889667
ProteinModelPortal:E5RI26 SMR:E5RI26 Ensembl:ENST00000522756
ArrayExpress:E5RI26 Bgee:E5RI26 Uniprot:E5RI26
Length = 94
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 18 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 76
Query: 95 YI 96
YI
Sbjct: 77 YI 78
>UNIPROTKB|H0YB39 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
PRIDE:H0YB39 Ensembl:ENST00000521173 Bgee:H0YB39 Uniprot:H0YB39
Length = 277
Score = 135 (52.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/49 (61%), Positives = 34/49 (69%)
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQ-HRAP 110
GR TGEA+VQF +E AE AL+KHKERIGHRYI F R V+ H P
Sbjct: 24 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDP 72
>ZFIN|ZDB-GENE-060825-196 [details] [associations]
symbol:grsf1 "G-rich RNA sequence binding factor 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060825-196 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BX323596 GeneTree:ENSGT00620000087736
IPI:IPI01023901 ProteinModelPortal:F8W4V6
Ensembl:ENSDART00000149868 ArrayExpress:F8W4V6 Bgee:F8W4V6
Uniprot:F8W4V6
Length = 403
Score = 136 (52.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/93 (33%), Positives = 59/93 (63%)
Query: 8 EVSDRYIE-VFKVRRQ--EMDWKLQHTGIVEG-KKDDIAQFFDGLEIISNGITLVEDPFN 63
EV+++ E + K ++ E D ++ G+ + DI +FF GL+++ +G+T++ +
Sbjct: 191 EVTNKDAEAILKASKERVETDTVVRLRGLPYSCTEGDIIRFFSGLDVVEDGVTIILNR-R 249
Query: 64 GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ +G+A+V+F K AE AL+K +E +G+RYI
Sbjct: 250 GKSSGDAFVEFATKAMAEKALKKDREILGNRYI 282
>TAIR|locus:2156897 [details] [associations]
symbol:AT5G66010 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K12898
IPI:IPI00541506 RefSeq:NP_201402.3 UniGene:At.28214
ProteinModelPortal:F4JZ11 SMR:F4JZ11 EnsemblPlants:AT5G66010.1
GeneID:836731 KEGG:ath:AT5G66010 OMA:YEVGSKR Uniprot:F4JZ11
Length = 255
Score = 110 (43.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
K I +FF G ++I + +V P +G+ TGEA+V+F E A A+ K K IG RY+
Sbjct: 179 KPQIIEFFSGYKVIQGRVQVVCRP-DGKATGEAFVEFETGEEARRAMAKDKMSIGSRYV 236
Score = 101 (40.6 bits), Expect = 0.00021, P = 0.00021
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
DI +FF GL I+ + LV NG+ +GEA+V F E+ALQ+ + +G RY+
Sbjct: 64 DIFEFFAGLNIVD--VLLVSK--NGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYV 116
Score = 39 (18.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 12 RYIEVFKVRRQE 23
RY+EVF+ +Q+
Sbjct: 114 RYVEVFRCSKQD 125
>MGI|MGI:1924661 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924661 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
HSSP:P55795 CTD:80004 OMA:VIKQKYE OrthoDB:EOG49078K EMBL:BC031444
EMBL:AK020578 IPI:IPI00276878 RefSeq:NP_789808.1 UniGene:Mm.183003
ProteinModelPortal:Q8K0G8 SMR:Q8K0G8 STRING:Q8K0G8
PhosphoSite:Q8K0G8 PaxDb:Q8K0G8 PRIDE:Q8K0G8
Ensembl:ENSMUST00000115979 GeneID:77411 KEGG:mmu:77411
UCSC:uc009nff.1 InParanoid:Q8K0G8 NextBio:346885 Bgee:Q8K0G8
CleanEx:MM_RBM35B Genevestigator:Q8K0G8 Uniprot:Q8K0G8
Length = 717
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/95 (37%), Positives = 49/95 (51%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D E VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDN--ETV-VRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++FVD E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI 317
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
>UNIPROTKB|F1MSN9 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VIKQKYE EMBL:DAAA02046691
IPI:IPI00699877 UniGene:Bt.94194 Ensembl:ENSBTAT00000005736
NextBio:20869663 Uniprot:F1MSN9
Length = 717
Score = 138 (53.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++FVD E +LALQ+HK +G R
Sbjct: 257 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFVDSEQRDLALQRHKHHMGVR 315
Query: 95 YI 96
YI
Sbjct: 316 YI 317
Score = 104 (41.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
Score = 37 (18.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 12 RYIEVFKVRRQE 23
RYIEV+K +E
Sbjct: 315 RYIEVYKATGEE 326
>UNIPROTKB|F1PA85 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
EMBL:AAEX03004121 RefSeq:XP_851504.1 Ensembl:ENSCAFT00000032365
GeneID:489745 KEGG:cfa:489745 Uniprot:F1PA85
Length = 717
Score = 138 (53.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++FVD E +LALQ+HK +G R
Sbjct: 257 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFVDSEQRDLALQRHKHHMGVR 315
Query: 95 YI 96
YI
Sbjct: 316 YI 317
Score = 102 (41.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 ADGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGILGKRYI 421
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 12 RYIEVFKVRRQE 23
RYIEV+K +E
Sbjct: 315 RYIEVYKATGEE 326
>UNIPROTKB|F1P509 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0043484 "regulation
of RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0043484 GeneTree:ENSGT00620000087828 OMA:VAAMTEC
EMBL:AADN02024878 IPI:IPI00596521 Ensembl:ENSGALT00000025730
Uniprot:F1P509
Length = 523
Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV++E +LALQ+HK +G+R
Sbjct: 149 QSSDQDIAKFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVNEEHRDLALQRHKHHMGNR 207
Query: 95 YI 96
YI
Sbjct: 208 YI 209
Score = 101 (40.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V P + RPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 274 GVLFVTYP-DSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYI 315
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ +RYIEV+K ++ L+ G +G +++AQF
Sbjct: 204 MGNRYIEVYKATGEDF---LKIAG-AKGTSNEVAQF 235
>UNIPROTKB|Q9H6T0 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0005634 GO:GO:0005813
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
HOGENOM:HOG000112401 KO:K14947 HSSP:Q9Z2X1 CTD:80004 OMA:VIKQKYE
OrthoDB:EOG49078K EMBL:AK025571 EMBL:AK025901 EMBL:BC030146
EMBL:AF289577 IPI:IPI00034099 IPI:IPI00827597 RefSeq:NP_079215.2
UniGene:Hs.436585 UniGene:Hs.592053 ProteinModelPortal:Q9H6T0
SMR:Q9H6T0 IntAct:Q9H6T0 STRING:Q9H6T0 PhosphoSite:Q9H6T0
DMDM:74761482 PaxDb:Q9H6T0 PRIDE:Q9H6T0 Ensembl:ENST00000473183
Ensembl:ENST00000565858 GeneID:80004 KEGG:hsa:80004 UCSC:uc002evq.1
UCSC:uc010cfa.1 GeneCards:GC16M068263 HGNC:HGNC:26152 HPA:HPA048597
MIM:612960 neXtProt:NX_Q9H6T0 PharmGKB:PA164719361
InParanoid:Q9H6T0 ChiTaRS:ESRP2 GenomeRNAi:80004 NextBio:70079
Bgee:Q9H6T0 CleanEx:HS_RBM35B Genevestigator:Q9H6T0 Uniprot:Q9H6T0
Length = 727
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL + G+ L + GR GEA ++FVD E +LALQ+HK +G R
Sbjct: 267 QSSDQDVARFFKGLNVARGGVALCLNA-QGRRNGEALIRFVDSEQRDLALQRHKHHMGVR 325
Query: 95 YI 96
YI
Sbjct: 326 YI 327
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+ G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 388 TEGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 431
>UNIPROTKB|Q6DEZ7 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043484 "regulation of RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
SUPFAM:SSF53098 GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:P55795 EMBL:BC076946 RefSeq:NP_001005057.1
UniGene:Str.5962 ProteinModelPortal:Q6DEZ7 SMR:Q6DEZ7 PRIDE:Q6DEZ7
Ensembl:ENSXETT00000032125 GeneID:448608 KEGG:xtr:448608
Xenbase:XB-GENE-985138 InParanoid:Q6DEZ7 Bgee:Q6DEZ7 Uniprot:Q6DEZ7
Length = 687
Score = 135 (52.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 107 (42.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P N RPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 359 GILFVTYPDN-RPTGDAFVLFACEEYAQNALKKHKELLGKRYI 400
Score = 44 (20.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ +RYIEV+K ++ L+ G G +++AQF
Sbjct: 291 MGNRYIEVYKATGEDF---LKIAG---GTSNEVAQF 320
>UNIPROTKB|Q7ZY29 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043484
"regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
CTD:54845 KO:K14947 EMBL:BC044002 RefSeq:NP_001079524.1
UniGene:Xl.14515 HSSP:P55795 ProteinModelPortal:Q7ZY29 SMR:Q7ZY29
PRIDE:Q7ZY29 GeneID:379211 KEGG:xla:379211 Xenbase:XB-GENE-985143
Uniprot:Q7ZY29
Length = 688
Score = 135 (52.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G+R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGNR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 107 (42.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P N RPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 359 GILFVTYPDN-RPTGDAFVLFACEEYAQNALKKHKELLGKRYI 400
Score = 44 (20.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ +RYIEV+K ++ L+ G G +++AQF
Sbjct: 291 MGNRYIEVYKATGEDF---LKIAG---GTSNEVAQF 320
>UNIPROTKB|Q5ZLR4 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484
eggNOG:NOG262593 GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401
KO:K14947 HSSP:Q9Z2X1 EMBL:AJ719670 IPI:IPI00574410
RefSeq:NP_001025737.1 UniGene:Gga.9032 ProteinModelPortal:Q5ZLR4
SMR:Q5ZLR4 PRIDE:Q5ZLR4 Ensembl:ENSGALT00000005333 GeneID:415710
KEGG:gga:415710 CTD:80004 InParanoid:Q5ZLR4 OMA:VIKQKYE
OrthoDB:EOG49078K NextBio:20819270 Uniprot:Q5ZLR4
Length = 701
Score = 135 (52.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+FV+ E +LAL++HK +G R
Sbjct: 236 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFVNSEQRDLALERHKHHMGSR 294
Query: 95 YI 96
YI
Sbjct: 295 YI 296
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
G+ V+ P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 359 GLLFVKYP-DGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYI 400
Score = 46 (21.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ RYIEV+K +E L+ G G +++AQF
Sbjct: 291 MGSRYIEVYKATGEEF---LKIAG---GTSNEVAQF 320
>UNIPROTKB|H0YBR2 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000519505
Uniprot:H0YBR2
Length = 502
Score = 132 (51.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 101 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 159
Query: 95 YI 96
YI
Sbjct: 160 YI 161
Score = 108 (43.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 224 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 265
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 159 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 185
>UNIPROTKB|F1PQY5 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03015961 Ensembl:ENSCAFT00000014811 Uniprot:F1PQY5
Length = 521
Score = 132 (51.5 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 75 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 133
Query: 95 YI 96
YI
Sbjct: 134 YI 135
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 39 DDIAQFFDGLEIISNG---ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
D++ FF I+ G I V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 180 DEVVAFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRY 238
Query: 96 I 96
I
Sbjct: 239 I 239
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 133 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 159
>UNIPROTKB|H0YBB3 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000517610
Bgee:H0YBB3 Uniprot:H0YBB3
Length = 522
Score = 132 (51.5 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 94 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 152
Query: 95 YI 96
YI
Sbjct: 153 YI 154
Score = 108 (43.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 217 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 258
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 152 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 178
>ZFIN|ZDB-GENE-030131-9824 [details] [associations]
symbol:esrp2 "epithelial splicing regulatory
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0043484 "regulation of RNA
splicing" evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-9824 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:Q9Z2X1 CTD:80004 EMBL:BC045439 EMBL:BC065688
IPI:IPI00488983 IPI:IPI00769676 RefSeq:NP_954966.1 UniGene:Dr.200
ProteinModelPortal:Q7ZVR8 SMR:Q7ZVR8 STRING:Q7ZVR8 PRIDE:Q7ZVR8
GeneID:572992 KEGG:dre:572992 InParanoid:Q7ZVR8 NextBio:20891026
Uniprot:Q7ZVR8
Length = 736
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G+ L + GR GEA V+F++ E ++AL +HK +G R
Sbjct: 234 QSSDQDIARFFKGLNIAKGGVALCLNA-QGRRNGEALVRFINSEHRDMALDRHKHHMGSR 292
Query: 95 YI 96
YI
Sbjct: 293 YI 294
Score = 111 (44.1 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 52 SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFTGHRYTVQHRAP 110
+ G+ V+ P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI F VQ
Sbjct: 355 TEGLLFVKYP-DGRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLN 413
Query: 111 RCETSIPVSSSTHKP 125
R S P+ S+ P
Sbjct: 414 RY-MSTPLISTLPPP 427
Score = 46 (21.3 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ RYIEV+K +E L+ G G +++AQF
Sbjct: 289 MGSRYIEVYKATGEEF---LKIAG---GTSNEVAQF 318
>UNIPROTKB|F1MVN3 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 CTD:54845
GeneTree:ENSGT00620000087828 KO:K14947 OMA:VAAMTEC
EMBL:DAAA02039465 IPI:IPI00913393 RefSeq:NP_001179931.1
UniGene:Bt.62027 Ensembl:ENSBTAT00000037192 GeneID:538640
KEGG:bta:538640 NextBio:20877490 Uniprot:F1MVN3
Length = 677
Score = 133 (51.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 235 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGSR 293
Query: 95 YI 96
YI
Sbjct: 294 YI 295
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 39 DDIAQFFDGLEIISNG---ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
D++ FF I+ G I V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 340 DEVVAFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRY 398
Query: 96 I 96
I
Sbjct: 399 I 399
Score = 43 (20.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 9 VSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
+ RYIEV+K ++ L+ G G +++AQF
Sbjct: 290 MGSRYIEVYKATGEDF---LKIAG---GTSNEVAQF 319
>UNIPROTKB|G3V8M2 [details] [associations]
symbol:Esrp2 "Epithelial-splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 RGD:1310855 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098 EMBL:CH473972
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
UniGene:Rn.231924 RefSeq:NP_001100893.1 PRIDE:G3V8M2
Ensembl:ENSRNOT00000026873 GeneID:307810 KEGG:rno:307810
NextBio:657907 Uniprot:G3V8M2
Length = 717
Score = 133 (51.9 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 2 GHCRTGEVSDRYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQFFDGLEIISNGITLVEDP 61
G C +V D E VR + + W + D+A+FF GL I G+ L +
Sbjct: 235 GPCSKADVVDN--ETV-VRARGLPW--------QSSDQDVARFFKGLNIARGGVALCLNA 283
Query: 62 FNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GR GEA ++F D E +LALQ+HK +G RYI
Sbjct: 284 -QGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYI 317
Score = 103 (41.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 379 DGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 421
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 12 RYIEVFKVRRQE 23
RYIEV+K +E
Sbjct: 315 RYIEVYKATGEE 326
>UNIPROTKB|F1PSN8 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:AAEX03015961
Ensembl:ENSCAFT00000014804 Uniprot:F1PSN8
Length = 634
Score = 132 (51.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 192 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 250
Query: 95 YI 96
YI
Sbjct: 251 YI 252
Score = 109 (43.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 39 DDIAQFFDGLEIISNG---ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
D++ FF I+ G I V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 297 DEVVAFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRY 355
Query: 96 I 96
I
Sbjct: 356 I 356
Score = 42 (19.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 250 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 276
>FB|FBgn0023441 [details] [associations]
symbol:fus "fusilli" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE013599 GO:GO:0005634
GO:GO:0007173 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 HSSP:P55795 EMBL:AF321979
EMBL:BT025963 EMBL:BT003299 EMBL:BT023793 EMBL:AY052064
RefSeq:NP_524691.1 RefSeq:NP_725479.1 RefSeq:NP_725480.1
RefSeq:NP_725481.1 RefSeq:NP_725482.1 RefSeq:NP_725483.1
UniGene:Dm.7727 ProteinModelPortal:Q9BJZ5 SMR:Q9BJZ5
MINT:MINT-1023688 STRING:Q9BJZ5 PRIDE:Q9BJZ5
EnsemblMetazoa:FBtr0087343 EnsemblMetazoa:FBtr0087344
EnsemblMetazoa:FBtr0087346 GeneID:44095 KEGG:dme:Dmel_CG8205
UCSC:CG8205-RD CTD:2521 FlyBase:FBgn0023441 InParanoid:A1ZA30
OMA:KFRYIEV OrthoDB:EOG4866TJ PhylomeDB:Q9BJZ5 ChiTaRS:FUS
GenomeRNAi:44095 NextBio:836730 Bgee:Q9BJZ5 Uniprot:Q9BJZ5
Length = 967
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL + G+ L P GR GEA ++FV +E ++AL++HK IG R
Sbjct: 289 QSSDQDIAKFFRGLNVAKGGVALCLSPL-GRRNGEALIRFVCQEHRDMALKRHKHHIGTR 347
Query: 95 YI 96
YI
Sbjct: 348 YI 349
>RGD|1560481 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484
"regulation of RNA splicing" evidence=IEA;ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
EMBL:AABR03040708 EMBL:AABR03042124 EMBL:BC166735 IPI:IPI00929919
IPI:IPI00948834 RefSeq:NP_001121036.2 UniGene:Rn.161971
Ensembl:ENSRNOT00000067129 GeneID:500409 KEGG:rno:500409
UCSC:RGD:1560481 NextBio:706112 ArrayExpress:B2RYD2
Genevestigator:B2RYD2 Uniprot:B2RYD2
Length = 677
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 235 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 293
Query: 95 YI 96
YI
Sbjct: 294 YI 295
Score = 108 (43.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 358 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 293 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 319
>MGI|MGI:1917326 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917326 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:CH466538 SUPFAM:SSF53098 GO:GO:0043484
EMBL:AL772170 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 EMBL:AK042164 EMBL:AK140848
EMBL:AK166376 EMBL:BC031468 EMBL:BC059280 IPI:IPI00377935
IPI:IPI00649037 IPI:IPI00828247 IPI:IPI00828788 IPI:IPI01027663
RefSeq:NP_918944.2 UniGene:Mm.387719 HSSP:Q9Z2X1
ProteinModelPortal:Q3US41 SMR:Q3US41 STRING:Q3US41 PaxDb:Q3US41
PRIDE:Q3US41 Ensembl:ENSMUST00000043781 Ensembl:ENSMUST00000108310
Ensembl:ENSMUST00000108313 Ensembl:ENSMUST00000147342
Ensembl:ENSMUST00000155519 GeneID:207920 KEGG:mmu:207920
UCSC:uc008rzk.2 UCSC:uc008rzl.2 UCSC:uc008rzm.2 UCSC:uc008rzn.1
InParanoid:Q3US41 NextBio:372085 Bgee:Q3US41 CleanEx:MM_RBM35A
Genevestigator:Q3US41 Uniprot:Q3US41
Length = 680
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 234 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 292
Query: 95 YI 96
YI
Sbjct: 293 YI 294
Score = 111 (44.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHKE +G RYI
Sbjct: 357 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYI 398
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 292 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 318
>UNIPROTKB|Q6NXG1 [details] [associations]
symbol:ESRP1 "Epithelial splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593 KO:K14947 EMBL:BX647570
EMBL:AC108860 EMBL:AP005660 EMBL:BC019932 EMBL:BC067098
EMBL:BC099916 EMBL:BC112043 EMBL:AK000178 IPI:IPI00184262
IPI:IPI00654821 IPI:IPI00789651 IPI:IPI00797684 IPI:IPI00889741
RefSeq:NP_001030087.2 RefSeq:NP_001116297.1 RefSeq:NP_001116298.1
RefSeq:NP_001116299.1 RefSeq:NP_060167.2 UniGene:Hs.487471 PDB:2DHA
PDBsum:2DHA ProteinModelPortal:Q6NXG1 SMR:Q6NXG1 STRING:Q6NXG1
PhosphoSite:Q6NXG1 DMDM:124020999 PaxDb:Q6NXG1 PRIDE:Q6NXG1
Ensembl:ENST00000358397 Ensembl:ENST00000423620
Ensembl:ENST00000433389 Ensembl:ENST00000454170 GeneID:54845
KEGG:hsa:54845 UCSC:uc003ygq.4 UCSC:uc003ygr.4 UCSC:uc003ygt.4
UCSC:uc003ygv.3 GeneCards:GC08P095653 HGNC:HGNC:25966 HPA:HPA023719
HPA:HPA023720 MIM:612959 neXtProt:NX_Q6NXG1 PharmGKB:PA164719324
InParanoid:Q6NXG1 OMA:VAAMTEC ChiTaRS:ESRP1
EvolutionaryTrace:Q6NXG1 GenomeRNAi:54845 NextBio:57677
ArrayExpress:Q6NXG1 Bgee:Q6NXG1 CleanEx:HS_RBM35A
Genevestigator:Q6NXG1 Uniprot:Q6NXG1
Length = 681
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 235 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 293
Query: 95 YI 96
YI
Sbjct: 294 YI 295
Score = 108 (43.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 358 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 293 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 319
>UNIPROTKB|F1LP81 [details] [associations]
symbol:Esrp1 "Epithelial-splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 IPI:IPI00558323
Ensembl:ENSRNOT00000010846 ArrayExpress:F1LP81 Uniprot:F1LP81
Length = 681
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 235 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 293
Query: 95 YI 96
YI
Sbjct: 294 YI 295
Score = 108 (43.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 54 GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RYI
Sbjct: 358 GILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYI 399
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 293 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 319
>FB|FBgn0259139 [details] [associations]
symbol:glo "glorund" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0006417
"regulation of translation" evidence=IMP;NAS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0043234
"protein complex" evidence=IPI] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0007311 "maternal specification of dorsal/ventral
axis, oocyte, germ-line encoded" evidence=IMP] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051276 "chromosome organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
EMBL:AE014297 GO:GO:0043234 GO:GO:0006417 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0042060 GO:GO:0046427
GO:GO:0051276 GO:GO:0045451 GO:GO:0007311
GeneTree:ENSGT00620000087828 KO:K12898 FlyBase:FBgn0259139
UniGene:Dm.4997 GeneID:41431 KEGG:dme:Dmel_CG6946 CTD:41431
GenomeRNAi:41431 NextBio:823816 EMBL:AY089465 RefSeq:NP_650120.1
RefSeq:NP_731639.1 SMR:Q9VGH5 IntAct:Q9VGH5 MINT:MINT-293245
STRING:Q9VGH5 EnsemblMetazoa:FBtr0089917 EnsemblMetazoa:FBtr0089919
UCSC:CG6946-RA InParanoid:Q9VGH5 OMA:NFGPIGG Uniprot:Q9VGH5
Length = 586
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 38 KDDIAQFFDGLEIISN--GITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+ I +FF GL+I ++ GI V D GR TGEA+VQF ++ E AL +++E+IGHRY
Sbjct: 159 EQQIEEFFSGLDIKTDREGILFVMDR-RGRATGEAFVQFESQDDTEQALGRNREKIGHRY 217
Query: 96 I 96
I
Sbjct: 218 I 218
Score = 102 (41.0 bits), Expect = 0.00031, P = 0.00031
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 40 DIAQFFDGLEII--SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI- 96
+I F + + + S GI LV +G+ TGEAYV+ +E E A + +K +GHRYI
Sbjct: 64 EILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIE 123
Query: 97 FFT 99
FT
Sbjct: 124 VFT 126
>UNIPROTKB|F1RY52 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:CU468309
Ensembl:ENSSSCT00000006690 Uniprot:F1RY52
Length = 711
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ DIA+FF GL I G L + GR GEA V+FV +E +LALQ+HK +G R
Sbjct: 265 QSSDQDIARFFKGLNIAKGGAALCLNA-QGRRNGEALVRFVSEEHRDLALQRHKHHMGTR 323
Query: 95 YI 96
YI
Sbjct: 324 YI 325
Score = 109 (43.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 39 DDIAQFFDGLEIISNG---ITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
D++ FF I+ G I V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 370 DEVVAFFGQHCPITGGKEGILFVTYP-DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRY 428
Query: 96 I 96
I
Sbjct: 429 I 429
Score = 42 (19.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 12 RYIEVFKVRRQEMDWKLQHTGIVEGKKDDIAQF 44
RYIEV+K ++ L+ G G +++AQF
Sbjct: 323 RYIEVYKATGEDF---LKIAG---GTSNEVAQF 349
>RGD|1310855 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA;ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1310855 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
eggNOG:NOG262593 HOGENOM:HOG000112401 OrthoDB:EOG49078K
EMBL:BC166804 IPI:IPI00359594 UniGene:Rn.231924
ProteinModelPortal:B2RYJ8 SMR:B2RYJ8 PhosphoSite:B2RYJ8
PRIDE:B2RYJ8 UCSC:RGD:1310855 ArrayExpress:B2RYJ8
Genevestigator:B2RYJ8 Uniprot:B2RYJ8
Length = 716
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
+ D+A+FF GL I G+ L + GR GEA ++F D E +LALQ+HK +G R
Sbjct: 256 QSSDQDVARFFKGLNIARGGVALCLNA-QGRRNGEALIRFEDSEQRDLALQRHKHHMGVR 314
Query: 95 YI 96
YI
Sbjct: 315 YI 316
Score = 103 (41.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 53 NGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+G+ V P +GRPTG+A+ F +E A+ AL++HK +G RYI
Sbjct: 378 DGLLFVRHP-DGRPTGDAFALFACEELAQAALRRHKGMLGKRYI 420
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 12 RYIEVFKVRRQE 23
RYIEV+K +E
Sbjct: 314 RYIEVYKATGEE 325
>WB|WBGene00006367 [details] [associations]
symbol:sym-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0010172 "embryonic body morphogenesis"
evidence=IGI] [GO:0050879 "multicellular organismal movement"
evidence=IGI] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0009792 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043484
GO:GO:0010172 eggNOG:NOG262593 GeneTree:ENSGT00620000087828
KO:K14947 HSSP:P55795 EMBL:Z68319 EMBL:Z70038 EMBL:AY220985
PIR:T25208 RefSeq:NP_495960.2 UniGene:Cel.5905
ProteinModelPortal:Q22708 SMR:Q22708 IntAct:Q22708 STRING:Q22708
PaxDb:Q22708 EnsemblMetazoa:ZK1067.6 GeneID:174461
KEGG:cel:CELE_ZK1067.6 UCSC:ZK1067.6 CTD:174461 WormBase:ZK1067.6
HOGENOM:HOG000154473 InParanoid:Q22708 OMA:VENVMFT NextBio:884134
GO:GO:0050879 Uniprot:Q22708
Length = 618
Score = 119 (46.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI-FFT 99
I FF+ L++ + + +GRPTG+A+VQF +E A+ L KH++ IG RYI F
Sbjct: 297 IRTFFEPLKLTDKILFITRT--DGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFK 354
Query: 100 GHRYTVQHRAPRCE--TSIP-VSSSTHKP 125
VQ RC S P V+++ P
Sbjct: 355 STAAEVQQVVKRCNLINSSPAVANAVEAP 383
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 41 IAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
+AQFF GL+I+ GI L GR GE VQF +E+ +LAL++H+ + RYI
Sbjct: 197 VAQFFAGLDIVPGGIALCLSS-EGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYI 251
Score = 34 (17.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 12 RYIEVFKVRRQE 23
RYIEV+K E
Sbjct: 249 RYIEVYKAGLDE 260
Score = 33 (16.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 31 TGIVEGKKDDIAQFFD 46
T +V +D+ +FFD
Sbjct: 60 TRLVNITPEDVVKFFD 75
>UNIPROTKB|B4DHY1 [details] [associations]
symbol:HNRNPH3 "cDNA FLJ57726, highly similar to
Heterogeneous nuclear ribonucleoprotein H3" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
UniGene:Hs.643472 HGNC:HGNC:5043 ChiTaRS:HNRNPH3 EMBL:AC016395
EMBL:AK295316 IPI:IPI00908651 SMR:B4DHY1 STRING:B4DHY1
Ensembl:ENST00000441000 UCSC:uc010qiv.2 Uniprot:B4DHY1
Length = 238
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 100 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 155
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 24 MDWKLQHTG 32
MDW ++H G
Sbjct: 1 MDWVMKHNG 9
>WB|WBGene00020936 [details] [associations]
symbol:hrpf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:FO081084 GeneID:172395 KEGG:cel:CELE_W02D3.11 CTD:172395
RefSeq:NP_740877.1 ProteinModelPortal:Q9BIB7 SMR:Q9BIB7
DIP:DIP-24897N IntAct:Q9BIB7 MINT:MINT-1090704 STRING:Q9BIB7
PRIDE:Q9BIB7 EnsemblMetazoa:W02D3.11a.1 EnsemblMetazoa:W02D3.11a.2
UCSC:W02D3.11b WormBase:W02D3.11a HOGENOM:HOG000017293
InParanoid:Q9BIB7 OMA:EPYAQRE NextBio:875329 ArrayExpress:Q9BIB7
Uniprot:Q9BIB7
Length = 549
Score = 129 (50.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 40 DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI--F 97
DI+ F L I+ +GI L+ D RP GEAYV F E+ ++A Q+H + IGHRYI F
Sbjct: 138 DISDFLAPLPIVRDGI-LLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVF 196
Query: 98 FTGHR 102
HR
Sbjct: 197 EATHR 201
>ZFIN|ZDB-GENE-070112-1732 [details] [associations]
symbol:esrp1 "epithelial splicing regulatory
protein 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070112-1732 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 EMBL:BC129044 EMBL:BC134218 IPI:IPI00829273
RefSeq:NP_001074045.1 UniGene:Dr.13001 ProteinModelPortal:A1L1G1
SMR:A1L1G1 STRING:A1L1G1 Ensembl:ENSDART00000103431 GeneID:560190
KEGG:dre:560190 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 InParanoid:A4FVM7
KO:K14947 OMA:HIRQVIH OrthoDB:EOG42RD72 NextBio:20883322
Bgee:A1L1G1 Uniprot:A1L1G1
Length = 714
Score = 127 (49.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 18 KVRRQEMDWKLQHTGIVEGKKD-DIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVD 76
K+ R + + ++ G+ D DIA+FF GL I G L + GR GEA V+F
Sbjct: 217 KMERVDDNTVIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNA-QGRRNGEALVRFES 275
Query: 77 KETAELALQKHKERIGHRYI 96
+E +LALQ+HK +G RYI
Sbjct: 276 EEHRDLALQRHKHHMGGRYI 295
Score = 116 (45.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 34/89 (38%), Positives = 49/89 (55%)
Query: 39 DDIAQFFDGLEII---SNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRY 95
+ + QFF + S GI V P +GRPTG+A+V F +E A+ AL+KHK+ +G RY
Sbjct: 340 EQVLQFFSPACPVTDGSEGILFVRFP-DGRPTGDAFVLFSCEEHAQNALKKHKDMLGKRY 398
Query: 96 I-FFTGHRYTVQHRAPRCETS--IPVSSS 121
I F VQ + ++ IPV+ S
Sbjct: 399 IELFKSTAAEVQQVLNKYSSAPLIPVAPS 427
>WB|WBGene00022253 [details] [associations]
symbol:hrpf-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0040018 GO:GO:0003676 EMBL:FO081731 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K12898 RefSeq:NP_741422.1
ProteinModelPortal:Q8MXR2 SMR:Q8MXR2 DIP:DIP-24945N IntAct:Q8MXR2
MINT:MINT-1106723 STRING:Q8MXR2 PaxDb:Q8MXR2
EnsemblMetazoa:Y73B6BL.33 GeneID:177398 KEGG:cel:CELE_Y73B6BL.33
UCSC:Y73B6BL.33 CTD:177398 WormBase:Y73B6BL.33 HOGENOM:HOG000017787
InParanoid:Q8MXR2 OMA:QRMGRRY NextBio:896644 Uniprot:Q8MXR2
Length = 610
Score = 125 (49.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 8 EVSDRYIEVFKVRRQEMDWKLQ----------HTGIVEG-----KKDDIAQFFDGLEIIS 52
E+S+RYIEVF V E +++ + H + G K+DD+ +FF+GLE
Sbjct: 125 EISNRYIEVFTVEADEAEFEFRPDPDSNGEVNHVIRLRGVPWSCKEDDVRKFFEGLEPPP 184
Query: 53 NGITL--VEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
I + P RP+GEA+V+F ++ AE A+ + +G RY+
Sbjct: 185 AEIVIGGTGGP-RSRPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYV 229
>UNIPROTKB|D6RIU0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967216
ProteinModelPortal:D6RIU0 SMR:D6RIU0 Ensembl:ENST00000504348
ArrayExpress:D6RIU0 Bgee:D6RIU0 Uniprot:D6RIU0
Length = 168
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 36/89 (40%), Positives = 47/89 (52%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG--IVEGKKDDIAQFFDGL-------EIIS--NGITLVED 60
RY+EVFK EMDW L+HTG + D + GL EI+ +G+ +V +
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRL-RGLPFGCSKEEIVQFFSGLEIVPN 139
Query: 61 ----P--FNGRPTGEAYVQFVDKETAELA 83
P F GR TGEA+VQF +E AE A
Sbjct: 140 GITLPVDFQGRSTGEAFVQFASQEIAEKA 168
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|F1NWS6 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 EMBL:AADN02009154 IPI:IPI00602123
Ensembl:ENSGALT00000018869 OMA:ISTKREM Uniprot:F1NWS6
Length = 411
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 12 RYIEVFKVRRQEMDWKLQHT---------GIV-------EGKKDDIAQFFDGLEIISNGI 55
RY++V ++ +++D LQ G+V + +DDIA FF GL I +
Sbjct: 145 RYVKVHEIHDKDVDGLLQSLRYESEVMSDGVVLLRGLPFDSTEDDIADFFAGLRITD--M 202
Query: 56 TLVEDPFNG-RPTGEAYVQFVDKETAELALQKHKERIGHRYI--FFTGHRYTVQHRAPRC 112
T V + G R TGEAYVQF E AL +HKE + +RYI + + R +H + R
Sbjct: 203 TFV---YRGERKTGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRK 259
Query: 113 E 113
E
Sbjct: 260 E 260
>UNIPROTKB|D6RFM3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
HOGENOM:HOG000134241 IPI:IPI00965435 ProteinModelPortal:D6RFM3
SMR:D6RFM3 Ensembl:ENST00000513225 ArrayExpress:D6RFM3 Bgee:D6RFM3
Uniprot:D6RFM3
Length = 163
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 33/84 (39%), Positives = 44/84 (52%)
Query: 12 RYIEVFKVRRQEMDWKLQHTG--IVEGKKDDIAQFFDGL-------EIIS--NGITLVED 60
RY+EVFK EMDW L+HTG + D + GL EI+ +G+ +V +
Sbjct: 81 RYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRL-RGLPFGCSKEEIVQFFSGLEIVPN 139
Query: 61 ----P--FNGRPTGEAYVQFVDKE 78
P F GR TGEA+VQF +E
Sbjct: 140 GITLPVDFQGRSTGEAFVQFASQE 163
>UNIPROTKB|D6R9T0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964846
ProteinModelPortal:D6R9T0 SMR:D6R9T0 Ensembl:ENST00000510431
HOGENOM:HOG000134241 ArrayExpress:D6R9T0 Bgee:D6R9T0 Uniprot:D6R9T0
Length = 162
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RAM1 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967835
ProteinModelPortal:D6RAM1 SMR:D6RAM1 Ensembl:ENST00000515158
ArrayExpress:D6RAM1 Bgee:D6RAM1 Uniprot:D6RAM1
Length = 130
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RDL0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HOGENOM:HOG000220896 HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964237
ProteinModelPortal:D6RDL0 SMR:D6RDL0 Ensembl:ENST00000515714
ArrayExpress:D6RDL0 Bgee:D6RDL0 Uniprot:D6RDL0
Length = 84
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RDU3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00968132
ProteinModelPortal:D6RDU3 SMR:D6RDU3 Ensembl:ENST00000506721
ArrayExpress:D6RDU3 Bgee:D6RDU3 Uniprot:D6RDU3
Length = 171
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RIT2 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
HOGENOM:HOG000134241 IPI:IPI00966932 ProteinModelPortal:D6RIT2
SMR:D6RIT2 Ensembl:ENST00000503105 ArrayExpress:D6RIT2 Bgee:D6RIT2
Uniprot:D6RIT2
Length = 164
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RJ04 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00963924
ProteinModelPortal:D6RJ04 SMR:D6RJ04 Ensembl:ENST00000508103
ArrayExpress:D6RJ04 Bgee:D6RJ04 Uniprot:D6RJ04
Length = 172
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|E7EQJ0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00977852
ProteinModelPortal:E7EQJ0 SMR:E7EQJ0 Ensembl:ENST00000521116
ArrayExpress:E7EQJ0 Bgee:E7EQJ0 Uniprot:E7EQJ0
Length = 115
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>UNIPROTKB|D6RIH9 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00966018
ProteinModelPortal:D6RIH9 SMR:D6RIH9 Ensembl:ENST00000510678
ArrayExpress:D6RIH9 Bgee:D6RIH9 Uniprot:D6RIH9
Length = 184
Score = 109 (43.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 39 DDIAQFFDGLEIISNGITLVEDPFN--GRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
D++ +FF +I NG + + GRP+GEA+V+ ++ +LAL+K +E +GHRY+
Sbjct: 25 DEVQRFFSDCKI-QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYV 83
>ZFIN|ZDB-GENE-081022-16 [details] [associations]
symbol:rbm12 "RNA binding motif protein 12"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-081022-16 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOVERGEN:HBG057691 CTD:10137 HOGENOM:HOG000143525
EMBL:BC162102 EMBL:BC162473 EMBL:AY226101 IPI:IPI00483025
RefSeq:NP_001003856.1 UniGene:Dr.133225 SMR:Q6XLI5 GeneID:445379
KEGG:dre:445379 NextBio:20832083 Uniprot:Q6XLI5
Length = 876
Score = 104 (41.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 23 EMDWKLQHTGI-VEGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAE 81
++D+ + G+ E + I +FF L+I+ + I + P NGR TGE +V+F ++ +
Sbjct: 421 KLDYCVYLKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGP-NGRATGEGFVEFRNEMDYK 479
Query: 82 LALQKHKERIGHRYI 96
AL H + +G R+I
Sbjct: 480 AALGCHMQYMGSRFI 494
Score = 34 (17.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 7 GEVSDRYIEVFKVRRQEMDWK 27
G + RYIEV E W+
Sbjct: 363 GMIGQRYIEVSPAT--ERQWR 381
>UNIPROTKB|G3MYE8 [details] [associations]
symbol:G3MYE8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02039421 Ensembl:ENSBTAT00000065600 OMA:EVPRRIM
Uniprot:G3MYE8
Length = 248
Score = 103 (41.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 38 KDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHRYI 96
++DIA FF L I I + D GR TGEA V+FV E A A+ K K + HRYI
Sbjct: 110 ENDIANFFSPLNPIRVHIDIGAD---GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYI 165
>UNIPROTKB|J9NZV3 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03013911 Ensembl:ENSCAFT00000048972 Uniprot:J9NZV3
Length = 888
Score = 107 (42.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>UNIPROTKB|Q9NTZ6 [details] [associations]
symbol:RBM12 "RNA-binding protein 12" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:CH471077 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL109827 UniGene:Hs.700188 GermOnline:ENSG00000125976
eggNOG:NOG299235 HOVERGEN:HBG057691 EMBL:AJ289772 EMBL:AF345332
EMBL:AF345335 EMBL:AF393214 EMBL:AB018308 EMBL:AK092239
EMBL:BC012787 EMBL:BC013981 EMBL:AL834472 EMBL:AB015336
IPI:IPI00550308 RefSeq:NP_001185767.1 RefSeq:NP_001185769.1
RefSeq:NP_006038.2 RefSeq:NP_690051.1 PDB:1WEL PDB:2CPY PDB:2DNN
PDB:2EK1 PDB:2EK6 PDBsum:1WEL PDBsum:2CPY PDBsum:2DNN PDBsum:2EK1
PDBsum:2EK6 ProteinModelPortal:Q9NTZ6 SMR:Q9NTZ6 IntAct:Q9NTZ6
MINT:MINT-1366084 STRING:Q9NTZ6 PhosphoSite:Q9NTZ6 DMDM:30173387
PaxDb:Q9NTZ6 PeptideAtlas:Q9NTZ6 PRIDE:Q9NTZ6 DNASU:10137
Ensembl:ENST00000359646 Ensembl:ENST00000374104
Ensembl:ENST00000374114 GeneID:10137 KEGG:hsa:10137 UCSC:uc002xdq.3
CTD:10137 GeneCards:GC20M034236 HGNC:HGNC:9898 HPA:HPA043258
HPA:HPA043621 MIM:607179 neXtProt:NX_Q9NTZ6 PharmGKB:PA34261
InParanoid:Q9NTZ6 OMA:PVFLGPL OrthoDB:EOG44TP7C PhylomeDB:Q9NTZ6
EvolutionaryTrace:Q9NTZ6 GenomeRNAi:10137 NextBio:38349
ArrayExpress:Q9NTZ6 Bgee:Q9NTZ6 CleanEx:HS_RBM12
Genevestigator:Q9NTZ6 Uniprot:Q9NTZ6
Length = 932
Score = 107 (42.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>UNIPROTKB|F1P982 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:AAEX03013911 Ensembl:ENSCAFT00000013161
Uniprot:F1P982
Length = 945
Score = 107 (42.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 462 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 520
Query: 95 YI 96
+I
Sbjct: 521 FI 522
>UNIPROTKB|F1MND5 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087828 CTD:10137 OMA:PVFLGPL
EMBL:DAAA02036525 IPI:IPI00924418 RefSeq:NP_001185821.1
UniGene:Bt.91136 Ensembl:ENSBTAT00000061188 GeneID:100138139
KEGG:bta:100138139 NextBio:20789665 Uniprot:F1MND5
Length = 953
Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>UNIPROTKB|I3LLW0 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:CU210870 EMBL:CU914282 Ensembl:ENSSSCT00000023753
Ensembl:ENSSSCT00000028045 Uniprot:I3LLW0
Length = 955
Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F ++ + AL +HK+ +G+R
Sbjct: 462 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNEADYKAALCRHKQYMGNR 520
Query: 95 YI 96
+I
Sbjct: 521 FI 522
>CGD|CAL0003946 [details] [associations]
symbol:orf19.1389 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016071 "mRNA metabolic process"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 CGD:CAL0003946 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 EMBL:AACQ01000101 KO:K14396
RefSeq:XP_714561.1 ProteinModelPortal:Q59YD7 GeneID:3643794
KEGG:cal:CaO19.1389 Uniprot:Q59YD7
Length = 163
Score = 99 (39.9 bits), Expect = 0.00012, P = 0.00012
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 20 RRQEMDWKLQHTGIVEGKK--DDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDK 77
+++E+D + + G V+ + + + +FF G+ +I +T++ D F+G P G AY++F
Sbjct: 21 KQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIER-VTILFDRFSGLPKGYAYIEFEQT 79
Query: 78 ETAELALQK-HKERIGHRYIFFTGHR 102
E+ + A+ + H + R + T R
Sbjct: 80 ESVQKAIDELHGKEFRGRELRVTAKR 105
>MGI|MGI:1922960 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1922960 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AL833786 UniGene:Mm.27660
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AF345334 EMBL:AF393215 EMBL:AF393216 EMBL:AK017591
EMBL:AK029180 EMBL:AK035014 EMBL:AK080772 EMBL:AK166833
EMBL:BC026891 EMBL:BC027810 EMBL:BC052473 IPI:IPI00322263
RefSeq:NP_083673.3 RefSeq:NP_733486.2 UniGene:Mm.441281 PDB:2CQP
PDBsum:2CQP ProteinModelPortal:Q8R4X3 SMR:Q8R4X3 IntAct:Q8R4X3
STRING:Q8R4X3 PhosphoSite:Q8R4X3 PRIDE:Q8R4X3
Ensembl:ENSMUST00000059647 Ensembl:ENSMUST00000109604 GeneID:75710
KEGG:mmu:75710 UCSC:uc008nmh.1 InParanoid:Q3TKT7 ChiTaRS:RBM12
EvolutionaryTrace:Q8R4X3 NextBio:343756 Bgee:Q8R4X3
CleanEx:MM_RBM12 Genevestigator:Q8R4X3
GermOnline:ENSMUSG00000038171 Uniprot:Q8R4X3
Length = 992
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>UNIPROTKB|D4A116 [details] [associations]
symbol:Rbm12 "Protein Rbm12" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC118414 IPI:IPI00560597 Ensembl:ENSRNOT00000026700
ArrayExpress:D4A116 Uniprot:D4A116
Length = 1003
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
>RGD|1594333 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CH474050 eggNOG:NOG299235
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AC118414 EMBL:AY226099 IPI:IPI00421433
RefSeq:NP_001032746.1 UniGene:Rn.7119 SMR:Q6XLI7
Ensembl:ENSRNOT00000047246 GeneID:652928 KEGG:rno:652928
UCSC:RGD:1594333 HOGENOM:HOG000143525 InParanoid:Q6XLI7
NextBio:714873 Genevestigator:Q6XLI7 Uniprot:Q6XLI7
Length = 1032
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 35 EGKKDDIAQFFDGLEIISNGITLVEDPFNGRPTGEAYVQFVDKETAELALQKHKERIGHR 94
E + + FF L+I+ + I + P NG+ TGE +V+F + + AL +HK+ +G+R
Sbjct: 440 EAENKHVIDFFKKLDIVEDSIYIAYGP-NGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 95 YI 96
+I
Sbjct: 499 FI 500
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 141 141 0.00091 102 3 11 22 0.45 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 111
No. of states in DFA: 582 (62 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.49u 0.08s 15.57t Elapsed: 00:00:03
Total cpu time: 15.50u 0.08s 15.58t Elapsed: 00:00:04
Start: Thu Aug 15 14:50:38 2013 End: Thu Aug 15 14:50:42 2013
WARNINGS ISSUED: 1