Your job contains 1 sequence.
>psy307
MLELQDYGGSSSESDAESQTLHLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDVNT
KEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFASYG
YALDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQR
RTFASYGYALDPSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFL
GPWGGYTDEEKVSRPNEAQAAELEEYLAKKQKKGKQSEEKPLEEKTILHIKDPTDYQGRS
FLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRV
KLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW
EVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVA
YCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNR
FKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVC
ISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEI
CSGWSLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDILSKLSDKN
ASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRA
NISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRF
TKYSSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHD
HPFEEFYCICIVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRTSVELVKHLCEI
LRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKCKSSPAL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy307
(1019 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 1318 1.6e-134 1
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 1224 1.5e-124 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 1218 6.3e-124 1
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 1214 1.7e-123 1
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 1214 1.7e-123 1
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 1214 1.7e-123 1
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 1213 2.1e-123 1
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 1212 2.7e-123 1
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 1162 5.4e-118 1
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 1158 1.4e-117 1
WB|WBGene00018625 - symbol:prp-17 species:6239 "Caenorhab... 923 1.1e-92 1
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 782 1.0e-77 1
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 776 4.3e-77 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 612 2.6e-71 2
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 549 2.6e-58 2
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 526 1.8e-55 2
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 526 1.8e-55 2
FB|FBgn0032409 - symbol:Ced-12 "Ced-12" species:7227 "Dro... 372 4.5e-55 2
ZFIN|ZDB-GENE-040426-2069 - symbol:elmo1 "engulfment and ... 356 9.5e-47 2
CGD|CAL0001327 - symbol:orf19.6347 species:5476 "Candida ... 454 3.6e-46 3
UNIPROTKB|E2R7G8 - symbol:ELMO1 "Uncharacterized protein"... 359 6.3e-46 2
UNIPROTKB|Q92556 - symbol:ELMO1 "Engulfment and cell moti... 357 6.3e-46 2
UNIPROTKB|F1MQH0 - symbol:ELMO1 "Uncharacterized protein"... 355 6.3e-46 2
MGI|MGI:2153044 - symbol:Elmo1 "engulfment and cell motil... 357 1.3e-45 2
RGD|1308182 - symbol:Elmo1 "engulfment and cell motility ... 357 1.3e-45 2
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 484 3.8e-45 1
ASPGD|ASPL0000032184 - symbol:AN5196 species:162425 "Emer... 479 1.3e-44 1
UNIPROTKB|E2RF34 - symbol:ELMO2 "Uncharacterized protein"... 338 6.4e-42 2
UNIPROTKB|A6QR40 - symbol:ELMO3 "Engulfment and cell moti... 307 7.7e-42 2
MGI|MGI:2153045 - symbol:Elmo2 "engulfment and cell motil... 335 9.4e-42 2
UNIPROTKB|Q96BJ8 - symbol:ELMO3 "Engulfment and cell moti... 310 9.7e-42 2
UNIPROTKB|F1RFW8 - symbol:ELMO3 "Uncharacterized protein"... 313 1.2e-41 2
UNIPROTKB|Q5JVZ5 - symbol:ELMO2 "Engulfment and cell moti... 335 1.4e-41 2
UNIPROTKB|Q96JJ3 - symbol:ELMO2 "Engulfment and cell moti... 335 1.4e-41 2
UNIPROTKB|Q5RCC1 - symbol:ELMO2 "Engulfment and cell moti... 335 1.4e-41 2
UNIPROTKB|B4DRL5 - symbol:ELMO2 "cDNA FLJ60834, highly si... 335 1.5e-41 2
UNIPROTKB|A4FUD6 - symbol:ELMO2 "Engulfment and cell moti... 335 1.8e-41 2
UNIPROTKB|F1MUZ4 - symbol:ELMO2 "Engulfment and cell moti... 335 1.8e-41 2
UNIPROTKB|F1NFA5 - symbol:ELMO1 "Uncharacterized protein"... 293 1.8e-41 2
UNIPROTKB|E1C122 - symbol:ELMO2 "Uncharacterized protein"... 338 2.7e-41 2
UNIPROTKB|E1BSX1 - symbol:ELMO2 "Uncharacterized protein"... 338 2.9e-41 2
UNIPROTKB|G3V8H2 - symbol:Elmo2 "Engulfment and cell moti... 335 2.9e-41 2
UNIPROTKB|G3V982 - symbol:Elmo2 "Engulfment and cell moti... 335 3.1e-41 2
ZFIN|ZDB-GENE-050309-39 - symbol:im:7143453 "im:7143453" ... 336 6.1e-40 2
RGD|1304734 - symbol:Elmo3 "engulfment and cell motility ... 302 3.0e-39 2
UNIPROTKB|Q499U2 - symbol:Elmo3 "Engulfment and cell moti... 302 3.0e-39 2
MGI|MGI:2679007 - symbol:Elmo3 "engulfment and cell motil... 307 7.3e-39 2
UNIPROTKB|E2REZ5 - symbol:ELMO3 "Uncharacterized protein"... 273 2.4e-38 2
UNIPROTKB|E1BXG8 - symbol:ELMO1 "Uncharacterized protein"... 270 3.0e-38 2
UNIPROTKB|F1P6Y1 - symbol:ELMO3 "Uncharacterized protein"... 307 3.8e-38 2
UNIPROTKB|F8W9E7 - symbol:ELMO3 "Engulfment and cell moti... 310 1.2e-35 2
UNIPROTKB|F1NI18 - symbol:F1NI18 "Uncharacterized protein... 325 3.0e-35 2
UNIPROTKB|B4DZ20 - symbol:ELMO2 "cDNA FLJ56422, highly si... 335 3.8e-29 1
UNIPROTKB|H0YCM7 - symbol:ELMO2 "Engulfment and cell moti... 335 3.8e-29 1
UNIPROTKB|Q5JW01 - symbol:ELMO2 "Engulfment and cell moti... 335 3.8e-29 1
UNIPROTKB|Q5JVZ8 - symbol:ELMO2 "Engulfment and cell moti... 325 4.5e-28 1
TAIR|locus:2172084 - symbol:AT5G54520 "AT5G54520" species... 329 1.8e-27 1
UNIPROTKB|F5GZP8 - symbol:ELMO2 "Engulfment and cell moti... 335 3.1e-27 1
UNIPROTKB|I3LTY7 - symbol:ELMO2 "Uncharacterized protein"... 335 4.8e-27 1
UNIPROTKB|Q7Z5G9 - symbol:ELMO2 "Engulfment and cell moti... 335 6.7e-27 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 262 2.4e-21 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 262 2.4e-21 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 262 2.4e-21 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 262 2.4e-21 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 262 2.4e-21 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 262 2.4e-21 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 252 2.9e-20 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 251 3.7e-20 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 242 1.3e-18 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 238 4.5e-18 1
UNIPROTKB|Q5EAA6 - symbol:ELMO1 "Uncharacterized protein"... 225 2.2e-17 1
UNIPROTKB|F1SIM4 - symbol:ELMO1 "Uncharacterized protein"... 225 2.2e-17 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 225 2.2e-17 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 238 3.4e-17 1
UNIPROTKB|C9JIW2 - symbol:ELMO1 "Engulfment and cell moti... 223 3.6e-17 1
MGI|MGI:3045255 - symbol:Wdr25 "WD repeat domain 25" spec... 253 5.3e-17 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 235 1.7e-16 1
UNIPROTKB|C9JB20 - symbol:ELMO1 "Engulfment and cell moti... 209 1.1e-15 1
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 232 1.1e-15 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 225 4.8e-15 1
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 226 5.4e-15 1
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 225 6.6e-15 1
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 223 7.8e-15 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 218 8.8e-15 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 167 1.3e-14 2
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 220 1.7e-14 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 217 1.8e-14 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 211 2.1e-14 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 215 2.2e-14 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 215 2.2e-14 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 215 3.0e-14 1
UNIPROTKB|F1SM42 - symbol:ATG16L1 "Uncharacterized protei... 218 3.7e-14 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 211 4.0e-14 1
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 217 4.9e-14 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 214 7.8e-14 1
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 215 8.1e-14 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 211 8.4e-14 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 211 8.4e-14 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 211 8.4e-14 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 211 8.4e-14 1
WARNING: Descriptions of 584 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 262/467 (56%), Positives = 314/467 (67%)
Query: 176 FENQRRTFASYGYALDPSSEVESKVIGASMSGD-------KNKTVFESTSKRPLDKRKRN 228
FENQRRTF +YGYALDPS V+ + G S GD KTVFE + L RK+
Sbjct: 123 FENQRRTFHTYGYALDPS--VDDQADGQSFVGDLQSAYDDNGKTVFEPPKAKKL--RKQE 178
Query: 229 RNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXXPLEEKTIL 288
+ND PEDIEGFLGPWG + +E V++PN PLEEK+ L
Sbjct: 179 KNDNPEDIEGFLGPWGKFENEVSVAKPNEQERAELDELLSKRHKRGRIPEDKPLEEKSTL 238
Query: 289 HIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSA 348
HIKD DYQGRS+LH PHD+G NLRS+ PP +CFLPK +HTW GH KGIS+IRWFPK+A
Sbjct: 239 HIKDAYDYQGRSYLHAPHDLGVNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFPKTA 298
Query: 349 HLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLL 408
HLLLS SMDCRVKLWEVY ERRC+RT+ GHRQA++DI +NN GTNF+SA
Sbjct: 299 HLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRGTNFLSA----------- 347
Query: 409 LSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN---FISAGYDRYLKLWDT 465
S D +KLW+ E V + + R+ + F+ + F++ D+ + WDT
Sbjct: 348 ---SYDRYIKLWDA--ETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDT 402
Query: 466 ESGECISRFTSRKVAYC-VKFHPD--------EDKQ----HLDIPVDMKYIADPTMHSMP 512
SG+ + + + + F D +DK DIPVDMKYIADPTMHSMP
Sbjct: 403 RSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMP 462
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLIS 572
AVT +PN KW+ACQS+DNKI+IFSALNRFK+NRKKTF GHMV+GYAC LDFSPDMSYL+S
Sbjct: 463 AVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSYLVS 522
Query: 573 GDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
GD DGKCYIWDWKTTK++KKW+AHDGVCIS LWHPHE SKVVTAGWD
Sbjct: 523 GDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWD 569
Score = 409 (149.0 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 98/202 (48%), Positives = 126/202 (62%)
Query: 1 MLELQDYGGSSSE----SDAESQTL----------HLKPIESCAFSVAKSLSVCATPAVI 46
ML LQ Y SS E +DA + T HL P++ S++KS++VCA P V+
Sbjct: 1 MLGLQSYASSSDEESDHADAATATTNSEPSAPIPDHLLPVDK-THSLSKSIAVCAAPTVV 59
Query: 47 PKVMESSNLT-DVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHIN 105
P + T D KE+T N RYEE+YAP GP +P LT QQRA +NTL+G+VE+AHIN
Sbjct: 60 PLGASAVPRTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQQRAPRNTLAGYVEKAHIN 119
Query: 106 SFQFENQRRTFASYGYALDPSSEVES---KVIG--ASTSGDKNKTVFESTSKRPLDKRKR 160
+F+FENQRRTF +YGYALDPS + ++ +G S D KTVFE + L RK+
Sbjct: 120 AFEFENQRRTFHTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVFEPPKAKKL--RKQ 177
Query: 161 NRNDCPEDIEGFLGP---FENQ 179
+ND PEDIEGFLGP FEN+
Sbjct: 178 EKNDNPEDIEGFLGPWGKFENE 199
Score = 54 (24.1 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 331 WEGHTKG-ISAIRWFPKSAHLLLSCSMDCRVKLWE 364
W+ H ISA+ W P A +++ D ++K W+
Sbjct: 543 WQAHDGVCISAL-WHPHEASKVVTAGWDGQIKYWD 576
Score = 52 (23.4 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQA-VRDICFNNTGTNFISAGYDRY 459
F L+S D + +W+ +K + + + H + + + + ++AG+D
Sbjct: 513 FSPDMSYLVSGDGDGKCYIWD-WKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQ 571
Query: 460 LKLWD 464
+K WD
Sbjct: 572 IKYWD 576
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 243/475 (51%), Positives = 311/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTF +YGYALDPS EV +K IG+ +KN+ TVFE T ++
Sbjct: 118 PAHINDFM--FEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFE-TGQK 174
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
++KRK+ + + +I+GFLGPW Y DE++V++P+
Sbjct: 175 KIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDK 234
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 235 PGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSA 294
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S H+LLSCSMDC++KLWEVY +RRC+RT+ GH +AVRDICFNN GT F+SA
Sbjct: 295 VRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSA--- 351
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 352 -----------AYDRYIKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 398
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 399 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 458
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 459 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 518
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGDADGK IWDWKTTKL+ + KAHD VCI +WHPHE SKV+T GWD
Sbjct: 519 PDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWD 573
Score = 345 (126.5 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 100/252 (39%), Positives = 136/252 (53%)
Query: 4 LQDYGGSSSESDAESQT----------------LHLKPIESCAFSVAKSLSVCATPAVIP 47
L YGGS SESD+E + LHL+P + +L V A P V
Sbjct: 8 LASYGGSDSESDSEPEADAGPQRAVVLASRDAVLHLRPPPAAP----PALPVDAAPEVAV 63
Query: 48 KV-MESSNLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINS 106
K +E+ D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN
Sbjct: 64 KEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHIND 123
Query: 107 FQFENQRRTFASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRN 161
F FE QRRTF +YGYALDPS EV +K IG+ +KN+ TVFE T ++ ++KRK+
Sbjct: 124 FMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFE-TGQKKIEKRKKF 182
Query: 162 RNDCPEDIEGFLGPFENQRRTFASYGYALDPSSEVESKVIGASMSGDKNKTVFESTSKRP 221
+ + +I+GFLGP+ A Y V+ K + A S ++ K + E T+KR
Sbjct: 183 KENDASNIDGFLGPW-------AKY---------VDEKEV-AKPSEEEQKELDEITAKR- 224
Query: 222 LDKRKRNRNDCP 233
KR + +D P
Sbjct: 225 -QKRGKLEDDKP 235
Score = 54 (24.1 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
+ H K W P +++C D +KLW+
Sbjct: 548 KAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 580
Score = 53 (23.7 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRY 459
F ++S D ++ +W+ +K + H + + + + + I+ G+D
Sbjct: 517 FSPDMSYVISGDADGKLNIWD-WKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWDGL 575
Query: 460 LKLWD 464
+KLWD
Sbjct: 576 IKLWD 580
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 247/476 (51%), Positives = 309/476 (64%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESK-VIGASMSGDKNK--TVFESTSK 219
P + F+ FE QRRTF+++GYALDPS S+ S IGA +KNK TVFE+ K
Sbjct: 115 PAHVNDFM--FEQQRRTFSTFGYALDPSVDTSQASSNSYIGAIEEAEKNKGLTVFETGPK 172
Query: 220 RPLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXX 279
+ +KRK+ + DI+ FLGPW Y DE+ V++P+
Sbjct: 173 KS-EKRKKVKGGEAADIDNFLGPWAKYQDEKDVAKPSEDEQKELDEITAKRQKRGKNEEE 231
Query: 280 XPLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGIS 339
P EEKT+LHIKD DYQGRS+LH P DVG NLRS PD+C+LPK Q+H W GHTKG+S
Sbjct: 232 SPAEEKTVLHIKDAYDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVS 291
Query: 340 AIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIR 399
AIR FPKS HLLLSCSMDC++KLWEVY ERRCVRT+ GH +AVRD+CFNN+GT F+SA
Sbjct: 292 AIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSA-- 349
Query: 400 WFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY- 456
+ D +KLW+ + +C+ + + +R+ + FN N + AG
Sbjct: 350 ------------AYDRYIKLWDS-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLLVAGMS 395
Query: 457 DRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYI 503
D+ + WD SGE + + A DE+++ + DIP D KYI
Sbjct: 396 DKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYI 455
Query: 504 ADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDF 563
A+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DF
Sbjct: 456 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 515
Query: 564 SPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
SPDMSY++SGDADGK IWDWKTTKL+ + KAHD VCIS LWHPHE SKV+T GWD
Sbjct: 516 SPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWD 571
Score = 332 (121.9 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 96/249 (38%), Positives = 134/249 (53%)
Query: 4 LQDYGGSS-SESDAESQT----------LHLKPIESCAFSVAKSLSVCATPAVIPKVMES 52
L YG S SE+++ES +HLKP++S + L+ AV V
Sbjct: 8 LVSYGSDSDSENESESPNNPQEIDPDALVHLKPLKSGGVTTVAVLNSAPEVAVKEDVETG 67
Query: 53 SNLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQ 112
+L D KE++ N YE ++APE+GP+NPF +QQ A +N LSG+ E AH+N F FE Q
Sbjct: 68 VHL-DPALKEVSYNPTYETMFAPEFGPMNPFRSQQMAAPRNMLSGYAEPAHVNDFMFEQQ 126
Query: 113 RRTFASYGYALDPS---SEVESK-VIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCP 166
RRTF+++GYALDPS S+ S IGA +KNK TVFE+ K+ +KRK+ +
Sbjct: 127 RRTFSTFGYALDPSVDTSQASSNSYIGAIEEAEKNKGLTVFETGPKKS-EKRKKVKGGEA 185
Query: 167 EDIEGFLGPFENQRRTFASYGYALDPSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRK 226
DI+ FLGP+ A Y + E V A S D+ K + E T+KR KR
Sbjct: 186 ADIDNFLGPW-------AKY--------QDEKDV--AKPSEDEQKELDEITAKR--QKRG 226
Query: 227 RNRNDCPED 235
+N + P +
Sbjct: 227 KNEEESPAE 235
Score = 64 (27.6 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 329 HTWEGHTKG-ISAIRWFPKSAHLLLSCSMDCRVKLWE 364
H + H K ISA+ W P +++C D ++KLW+
Sbjct: 543 HRIKAHDKVCISAL-WHPHETSKVITCGWDGQIKLWD 578
Score = 61 (26.5 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 331 WEGH-TKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD-ICFN 388
++GH G + F ++S D ++ +W+ +K + Y HR D +C
Sbjct: 501 FKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWD-WKT---TKLY--HRIKAHDKVC-- 552
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
ISA+ W P +++C D ++KLW+
Sbjct: 553 ------ISAL-WHPHETSKVITCGWDGQIKLWD 578
Score = 53 (23.7 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRY 459
F ++S D ++ +W+ +K + H + + + + + I+ G+D
Sbjct: 515 FSPDMSYVVSGDADGKLNIWD-WKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQ 573
Query: 460 LKLWD 464
+KLWD
Sbjct: 574 IKLWD 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 241/475 (50%), Positives = 310/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++
Sbjct: 117 PAHINDFM--FEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQK 173
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
++KRK+ + + +I+GFLGPW Y DE+ V++P+
Sbjct: 174 KIEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 233
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 234 PGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSA 293
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S HLLLSCSMDC++KLWEVY +RRC+RT+ GH +AVRDICFN GT F+SA
Sbjct: 294 VRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--- 350
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 351 -----------AYDRYLKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 397
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 398 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 517
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGD +GK IWDWKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 518 PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Score = 341 (125.1 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 83/188 (44%), Positives = 115/188 (61%)
Query: 7 YG-GSSSESDAESQ-----------TLHLKPIESCAFSVAKSLSVCATPAVIPKV-MESS 53
YG GS SESD++S+ +HL S S+A ++V + P V K +E+
Sbjct: 12 YGSGSGSESDSDSEGGRCSLPAADSLMHLTKSPSAKPSLA--VAVDSAPEVAVKEDLETG 69
Query: 54 NLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQR 113
D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN F FE QR
Sbjct: 70 VHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQR 129
Query: 114 RTFASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPED 168
RTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++ ++KRK+ + + +
Sbjct: 130 RTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQKKIEKRKKFKENDASN 188
Query: 169 IEGFLGPF 176
I+GFLGP+
Sbjct: 189 IDGFLGPW 196
Score = 56 (24.8 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 540 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 53 (23.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 554 IGAV-WHPHETSKVITCGWDGLIKLWD 579
Score = 50 (22.7 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 531 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 38 (18.4 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 789 EITNLWQQERTSREEWESHAKPIVELKEL 817
EIT Q++ EE K I+ +KE+
Sbjct: 218 EITAKRQKKGKQEEEKPGEEKTILHVKEM 246
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 241/475 (50%), Positives = 310/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++
Sbjct: 201 PAHINDFM--FEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQK 257
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
++KRK+ + + +I+GFLGPW Y DE+ V++P+
Sbjct: 258 KIEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 317
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 318 PGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSA 377
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S HLLLSCSMDC++KLWEVY +RRC+RT+ GH +AVRDICFN GT F+SA
Sbjct: 378 VRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--- 434
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 435 -----------AYDRYLKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 481
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 482 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 541
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 542 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 601
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGD +GK IWDWKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 602 PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 656
Score = 340 (124.7 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 83/188 (44%), Positives = 115/188 (61%)
Query: 7 YG-GSSSESDAESQ-----------TLHLKPIESCAFSVAKSLSVCATPAVIPKV-MESS 53
YG GS SESD++S+ +HL S S+A ++V + P V K +E+
Sbjct: 96 YGSGSGSESDSDSEGGRCCLPAADSLMHLTKSASTKPSLA--VAVDSAPEVAVKEDLETG 153
Query: 54 NLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQR 113
D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN F FE QR
Sbjct: 154 VHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQR 213
Query: 114 RTFASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPED 168
RTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++ ++KRK+ + + +
Sbjct: 214 RTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQKKIEKRKKFKENDASN 272
Query: 169 IEGFLGPF 176
I+GFLGP+
Sbjct: 273 IDGFLGPW 280
Score = 56 (24.8 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 624 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 663
Score = 53 (23.7 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 638 IGAV-WHPHETSKVITCGWDGLIKLWD 663
Score = 50 (22.7 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 615 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 663
Score = 38 (18.4 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 789 EITNLWQQERTSREEWESHAKPIVELKEL 817
EIT Q++ EE K I+ +KE+
Sbjct: 302 EITAKRQKKGKQEEEKPGEEKTILHVKEM 330
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 241/475 (50%), Positives = 310/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++
Sbjct: 117 PAHINDFM--FEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQK 173
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
++KRK+ + + +I+GFLGPW Y DE+ V++P+
Sbjct: 174 KIEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 233
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 234 PGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSA 293
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S HLLLSCSMDC++KLWEVY +RRC+RT+ GH +AVRDICFN GT F+SA
Sbjct: 294 VRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--- 350
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 351 -----------AYDRYLKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 397
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 398 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 517
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGD +GK IWDWKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 518 PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Score = 339 (124.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 83/188 (44%), Positives = 115/188 (61%)
Query: 7 YG-GSSSESDAESQ-----------TLHLKPIESCAFSVAKSLSVCATPAVIPKV-MESS 53
YG GS SESD++S+ +HL S S+A ++V + P V K +E+
Sbjct: 12 YGSGSGSESDSDSEGGRCSLPAADSLMHLTKSSSDKPSLA--VAVDSAPEVAVKEDLETG 69
Query: 54 NLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQR 113
D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN F FE QR
Sbjct: 70 VHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQR 129
Query: 114 RTFASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPED 168
RTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++ ++KRK+ + + +
Sbjct: 130 RTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFE-TGQKKIEKRKKFKENDASN 188
Query: 169 IEGFLGPF 176
I+GFLGP+
Sbjct: 189 IDGFLGPW 196
Score = 56 (24.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 540 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 53 (23.7 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 554 IGAV-WHPHETSKVITCGWDGLIKLWD 579
Score = 50 (22.7 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 531 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 38 (18.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 789 EITNLWQQERTSREEWESHAKPIVELKEL 817
EIT Q++ EE K I+ +KE+
Sbjct: 218 EITAKRQKKGKQEEEKPGEEKTILHVKEM 246
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
Identities = 242/475 (50%), Positives = 309/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++
Sbjct: 117 PAHINDFM--FEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFE-TGQK 173
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
+KRK+ + + +I+GFLGPW Y DE+ V++P+
Sbjct: 174 KTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 233
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 234 PGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSA 293
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S HLLLSCSMDC++KLWEVY ERRC+RT+ GH +AVRDICFN GT F+SA
Sbjct: 294 VRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSA--- 350
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 351 -----------AYDRYLKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 397
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 398 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 517
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGD +GK IWDWKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 518 PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Score = 339 (124.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 81/186 (43%), Positives = 112/186 (60%)
Query: 7 YG-GSSSESDAESQTLHLK-PIESCAFSVAKS--------LSVCATPAVIPKV-MESSNL 55
YG GS SESD++S++ P + KS ++V + P V K +E+
Sbjct: 12 YGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEVAVKEDLETGVH 71
Query: 56 TDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRT 115
D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN F FE QRRT
Sbjct: 72 LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRT 131
Query: 116 FASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPEDIE 170
FA+YGYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +I+
Sbjct: 132 FATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFE-TGQKKTEKRKKFKENDASNID 190
Query: 171 GFLGPF 176
GFLGP+
Sbjct: 191 GFLGPW 196
Score = 56 (24.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 540 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 53 (23.7 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 554 IGAV-WHPHETSKVITCGWDGLIKLWD 579
Score = 50 (22.7 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 531 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 38 (18.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 789 EITNLWQQERTSREEWESHAKPIVELKEL 817
EIT Q++ EE K I+ +KE+
Sbjct: 218 EITAKRQKKGKQEEEKPGEEKTILHVKEM 246
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 241/475 (50%), Positives = 309/475 (65%)
Query: 166 PEDIEGFLGPFENQRRTFASYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKR 220
P I F+ FE QRRTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++
Sbjct: 117 PAHINDFM--FEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFE-TGQK 173
Query: 221 PLDKRKRNRNDCPEDIEGFLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXX 280
+KRK+ + + +I+GFLGPW Y DE+ V++P+
Sbjct: 174 KTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 233
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P EEKTILH+K+ DYQGRS+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA
Sbjct: 234 PGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSA 293
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
+R FP S HLLLSCSMDC++KLWEVY +RRC+RT+ GH +AVRDICFN GT F+SA
Sbjct: 294 VRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--- 350
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-D 457
+ D +KLW+ + +C+ + + +R+ + FN N AG D
Sbjct: 351 -----------AYDRYLKLWDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSD 397
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-------------DIPVDMKYIA 504
+ + WD SGE + + A DE+++ + DIPVD KYIA
Sbjct: 398 KKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
+P+MHSMPAVT SPN KWLACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFS
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 517
Query: 565 PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
PDMSY+ISGD +GK IWDWKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 518 PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Score = 339 (124.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 82/188 (43%), Positives = 114/188 (60%)
Query: 7 YG-GSSSESDAESQ-----------TLHLKPIESCAFSVAKSLSVCATPAVIPKV-MESS 53
YG GS SESD++S+ +HL S S+ +++V + P V K +E+
Sbjct: 12 YGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKLSL--TVAVDSAPEVAVKEDLETG 69
Query: 54 NLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQR 113
D KE+ N YE ++APE+GP NPF TQQ A +N LSG+ E AHIN F FE QR
Sbjct: 70 VHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQR 129
Query: 114 RTFASYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPED 168
RTFA+YGYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +
Sbjct: 130 RTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFE-TGQKKTEKRKKFKENDASN 188
Query: 169 IEGFLGPF 176
I+GFLGP+
Sbjct: 189 IDGFLGPW 196
Score = 56 (24.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 540 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 53 (23.7 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 554 IGAV-WHPHETSKVITCGWDGLIKLWD 579
Score = 50 (22.7 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 531 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
Score = 38 (18.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 789 EITNLWQQERTSREEWESHAKPIVELKEL 817
EIT Q++ EE K I+ +KE+
Sbjct: 218 EITAKRQKKGKQEEEKPGEEKTILHVKEM 246
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 229/456 (50%), Positives = 297/456 (65%)
Query: 185 SYGYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKRPLDKRKRNRNDCPEDIEGF 239
++GYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +I+GF
Sbjct: 2 AFGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFE-TGQKKTEKRKKFKENDASNIDGF 60
Query: 240 LGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXXPLEEKTILHIKDPTDYQGR 299
LGPW Y DE+ V++P+ P EEKTILH+K+ DYQGR
Sbjct: 61 LGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMYDYQGR 120
Query: 300 SFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCR 359
S+LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA+R FP S HLLLSCSMDC+
Sbjct: 121 SYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCK 180
Query: 360 VKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKL 419
+KLWEVY +RRC+RT+ GH +AVRDICFN GT F+SA + D +KL
Sbjct: 181 IKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--------------AYDRYLKL 226
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-DRYLKLWDTESGECISRFTS 476
W+ + +C+ + + +R+ + FN N AG D+ + WD SGE + +
Sbjct: 227 WDT-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDR 284
Query: 477 RKVAYCVKFHPDEDKQHL-------------DIPVDMKYIADPTMHSMPAVTSSPNNKWL 523
A DE+++ + DIPVD KYIA+P+MHSMPAVT SPN KWL
Sbjct: 285 HLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWL 344
Query: 524 ACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
ACQSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFSPDMSY+ISGD +GK IWD
Sbjct: 345 ACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWD 404
Query: 584 WKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
WKTTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 405 WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 440
Score = 119 (46.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 118 SYGYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPEDIEGF 172
++GYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +I+GF
Sbjct: 2 AFGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFE-TGQKKTEKRKKFKENDASNIDGF 60
Query: 173 LGPF 176
LGP+
Sbjct: 61 LGPW 64
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 408 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 447
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 422 IGAV-WHPHETSKVITCGWDGLIKLWD 447
Score = 50 (22.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 416 RVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWD 464
++ +W+ +K + + H + + + + + I+ G+D +KLWD
Sbjct: 399 KLNIWD-WKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 447
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 229/454 (50%), Positives = 295/454 (64%)
Query: 187 GYALDPS---SEVESKVIGASMSGDKNK--TVFESTSKRPLDKRKRNRNDCPEDIEGFLG 241
GYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +I+GFLG
Sbjct: 1 GYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFE-TGQKKTEKRKKFKENDASNIDGFLG 59
Query: 242 PWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXXPLEEKTILHIKDPTDYQGRSF 301
PW Y DE+ V++P+ P EEKTILH+K+ DYQGRS+
Sbjct: 60 PWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMYDYQGRSY 119
Query: 302 LHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVK 361
LH P DVG NLRS PP++C+LPK Q+H W GHTKG+SA+R FP S HLLLSCSMDC++K
Sbjct: 120 LHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIK 179
Query: 362 LWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
LWEVY +RRC+RT+ GH +AVRDICFN GT F+SA + D +KLW+
Sbjct: 180 LWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA--------------AYDRYLKLWD 225
Query: 422 VYKEHRCVRTYYGHRQAVRDICFN--NTGTNFISAGY-DRYLKLWDTESGECISRFTSRK 478
+ +C+ + + +R+ + FN N AG D+ + WD SGE + +
Sbjct: 226 T-ETGQCI-SRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 283
Query: 479 VAYCVKFHPDEDKQHL-------------DIPVDMKYIADPTMHSMPAVTSSPNNKWLAC 525
A DE+++ + DIPVD KYIA+P+MHSMPAVT SPN KWLAC
Sbjct: 284 GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC 343
Query: 526 QSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWK 585
QSMDN+ILIF A NRF+LN+KK F+GHMVAGYAC +DFSPDMSY+ISGD +GK IWDWK
Sbjct: 344 QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWK 403
Query: 586 TTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
TTKL+ ++KAHD VCI +WHPHE SKV+T GWD
Sbjct: 404 TTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 437
Score = 115 (45.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 120 GYALDPS---SEVESKVIGASTSGDKNK--TVFESTSKRPLDKRKRNRNDCPEDIEGFLG 174
GYALDPS +V +K IG+ +KN+ TVFE T ++ +KRK+ + + +I+GFLG
Sbjct: 1 GYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFE-TGQKKTEKRKKFKENDASNIDGFLG 59
Query: 175 PF 176
P+
Sbjct: 60 PW 61
Score = 56 (24.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 326 TQVHT-WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
T++++ ++ H K W P +++C D +KLW+
Sbjct: 405 TKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 444
Score = 53 (23.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWE 421
I A+ W P +++C D +KLW+
Sbjct: 419 IGAV-WHPHETSKVITCGWDGLIKLWD 444
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 192/468 (41%), Positives = 268/468 (57%)
Query: 176 FENQRRTFASYGYALDPSSEV-ESKVIG--ASMSGDKNKTVFESTSKRPLDKRKRNRNDC 232
F Q R+F + GYA +P++E + +G +K ++FES K +KRKR RND
Sbjct: 108 FNRQIRSFDTLGYAQNPTAESGTTHFVGDVKKAEAEKGVSLFES-KKTGGEKRKRVRNDD 166
Query: 233 PEDIEGFLGPWGGYTDEEKVSRPN------XXXXXXXXXXXXXXXXXXXXXXXXPLEEKT 286
DI+G+ GPW + DE+ V++P EE +
Sbjct: 167 SADIDGYTGPWSRFIDEKTVAKPTPELQKQMDEIVKKRQEKSRRFKKEKEDSEQMAEESS 226
Query: 287 ILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPK 346
LH+K+ DYQGRSFL PP G NLR D P+RCF+PK VHT+ GH KG++ ++WFPK
Sbjct: 227 TLHLKEAEDYQGRSFLVPPSFTGVNLREDYVPERCFVPKKLVHTYRGHNKGVNFLQWFPK 286
Query: 347 SAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAH 406
SAHL LSCSMD ++KLWEVY +R VRTY GH+ VR++ FNN GT F+SA
Sbjct: 287 SAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSA--------- 337
Query: 407 LLLSCSMDCRVKLWEVYKEHRCVRTYYGH-RQAVRDICFNNTGTNFISAGYDRYLKLWDT 465
S D VKLW+ R + GH ++ ++ F+ ++ + WD+
Sbjct: 338 -----SFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDS 392
Query: 466 ESGECISRFTSRKVAY-CVKFHP--------DEDKQ----HLDIPVDMKYIADPTMHSMP 512
SGE + + A + F +DK +IPVD K I + +H++P
Sbjct: 393 RSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKLIQNVGLHAIP 452
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALN-RFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+T SPN+KW+ Q MDN+I++F ++ + + ++KK F GH AGYAC++DFSPD S+LI
Sbjct: 453 TMTKSPNDKWVVGQCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYACNIDFSPDQSFLI 512
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
SGDADGK +IWDW+T K+ KWKAHD CI+ LWHPHE S+++TAGWD
Sbjct: 513 SGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITAGWD 560
Score = 295 (108.9 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 70/178 (39%), Positives = 102/178 (57%)
Query: 4 LQDYGGSSSE-SDAESQTLHLKPIESCAFSVAKSLSVCATPAVIPK-VMESSNLTDVNTK 61
LQ YGGS SE SD ++ + + S ++ P V K + + D TK
Sbjct: 4 LQAYGGSDSEHSDDDAS---MDQVAKGKSSTLLERAIVTAPDVESKSAIRQVAIVDPKTK 60
Query: 62 EITKNLRYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFASYGY 121
EI N ++++L+ PE GPVN F ++QQR+ KNTL+GFVE AH+N F F Q R+F + GY
Sbjct: 61 EIKSNPKFDQLFKPESGPVNHFKSEQQRSQKNTLTGFVEPAHLNEFHFNRQIRSFDTLGY 120
Query: 122 ALDPSSEV-ESKVIG--ASTSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPF 176
A +P++E + +G +K ++FES K +KRKR RND DI+G+ GP+
Sbjct: 121 AQNPTAESGTTHFVGDVKKAEAEKGVSLFES-KKTGGEKRKRVRNDDSADIDGYTGPW 177
Score = 71 (30.1 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 29/131 (22%), Positives = 64/131 (48%)
Query: 337 GISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNF 394
G+ AI KS + ++ MD R+ L+++ ++ +R + ++A R N G +
Sbjct: 447 GLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDDK--LR--FSKKKAFRG--HNAAG--Y 498
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQA-VRDICFNNTGTNFIS 453
I + P + L+S D ++ +W+ ++ H+ V + H + + + + I+
Sbjct: 499 ACNIDFSPDQS-FLISGDADGKLFIWD-WRTHKIVGKWKAHDSTCIAALWHPHEKSRMIT 556
Query: 454 AGYDRYLKLWD 464
AG+D +K+W+
Sbjct: 557 AGWDGLIKMWN 567
Score = 54 (24.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLW 363
V W+ H A W P +++ D +K+W
Sbjct: 531 VGKWKAHDSTCIAALWHPHEKSRMITAGWDGLIKMW 566
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 189/509 (37%), Positives = 257/509 (50%)
Query: 144 KTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQRRTFASYGYALDPSSEVESKVIGA 203
K F S K+ K K + N ED F Q +F + GY+ +P++ E IG
Sbjct: 105 KKPFSSNDKKLDPKFKNHTNGLVEDYHINDYAFNQQVLSFKTNGYSENPNNSTE--FIG- 161
Query: 204 SMSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPWGGYTDEE--KVSRPNXXXXX 261
+ + T + + + DKRKRN D P ++ G+LGPWG E K R N
Sbjct: 162 HRKDENDHTKKNNNNNKNKDKRKRNITDDPSNVNGYLGPWGTTKAELDFKQGRENDMVSI 221
Query: 262 XXXXXXXXXXXXXXX---------------XXXXPLEEKTILHIKDPTDYQGRSFLHPPH 306
L +I H K DY GRS++ PP
Sbjct: 222 ETDLTEQQRAFMDSRVKKQKGKDEEGGDIDSTAAALSNTSIFHGKSKKDYMGRSWVDPPS 281
Query: 307 DVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVY 366
D LR TP F+PK +H + GHTKG++AIR+ PK HLLLS MD VK+W+ Y
Sbjct: 282 D----LRLVTPDT--FVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAY 335
Query: 367 KERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH 426
+RRC++TY GH QAVRDICF+N G F LSC D + +LW+ E
Sbjct: 336 GDRRCIQTYMGHSQAVRDICFSNDGRRF--------------LSCGYDRQTRLWDT--ET 379
Query: 427 RCVRTYYGHRQAVRDICFN---NTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-C 482
+ + + + + I FN + F+ G D+ + WD +S + + + A
Sbjct: 380 GKILSSFTNGKIPYCIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNT 439
Query: 483 VKFHPD--------EDKQ----HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDN 530
+ F D +DK IPV +KYI+DP+MHSMPAV P KW A QS+DN
Sbjct: 440 ITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDN 499
Query: 531 KILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLF 590
+ILI+SA +RF++N+KK F GH V+GYAC L FSPD ++ SGD+ GK + WDWKT+K+
Sbjct: 500 QILIYSARDRFRMNKKKRFLGHNVSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKII 559
Query: 591 KKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
K AH+ VCI W P EPSKV T W+
Sbjct: 560 KTINAHNNVCIGIEWAPLEPSKVATCSWN 588
Score = 173 (66.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 45 VIPKVMESSNLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQQRAD---KNTLSGFVEQ 101
++ + N + N K + N E L +GP PF + ++ D KN +G VE
Sbjct: 70 IVTSIRVVENKINPNDKILLYNPTVESLEGDIFGPKKPFSSNDKKLDPKFKNHTNGLVED 129
Query: 102 AHINSFQFENQRRTFASYGYALDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRN 161
HIN + F Q +F + GY+ +P++ E IG + + T + + + DKRKRN
Sbjct: 130 YHINDYAFNQQVLSFKTNGYSENPNNSTE--FIG-HRKDENDHTKKNNNNNKNKDKRKRN 186
Query: 162 RNDCPEDIEGFLGPF 176
D P ++ G+LGP+
Sbjct: 187 ITDDPSNVNGYLGPW 201
Score = 56 (24.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
N N I W P + +CS + +KLW+
Sbjct: 563 NAHNNVCIGIEWAPLEPSKVATCSWNNEIKLWD 595
Score = 56 (24.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
+ T H I W P + +CS + +KLW+
Sbjct: 559 IKTINAHNNVCIGIEWAPLEPSKVATCSWNNEIKLWD 595
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 183/490 (37%), Positives = 257/490 (52%)
Query: 167 EDIE-GFLGPFENQRRTFASYGYALDPSS-----EVES--KVIGASM-----SGDKNKTV 213
ED G G FE Q TF GYA DPS +VE+ K G S+ S K + +
Sbjct: 100 EDASIGSFG-FEEQYHTFHKCGYAADPSGMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKI 158
Query: 214 FESTSKRPLDKRKRNRNDCPE--DIEGFL-----GPWGGYTD--EEKVSRPNXXXXXXXX 264
S +R +++K E + E +L PW + + +++
Sbjct: 159 ERSKEEREGEEKKEEIEPEAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHA 218
Query: 265 XXXXXXXXXXXXXXXXPLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLP 324
+K+ H K+ DYQGRS++ P D N D C++P
Sbjct: 219 KKKEEKGQQGETKGEH-YADKSTFHGKEEKDYQGRSWIEAPKDAKAN------NDHCYIP 271
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
K VHTW GHTKG+SAIR+FPK HLLLS MDC+VK+W+VY +C+RTY GH +AVRD
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYY-GHRQAVRDIC 443
ICF+N G+ F++A D +K W+ + + + T+ G V +
Sbjct: 332 ICFSNDGSKFLTA--------------GYDKNIKYWDT-ETGQVISTFSTGKIPYVVKLN 376
Query: 444 FNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRKVAYCV--------KFHPDEDKQHL 494
++ N + AG D+ + WD +GE + A +F D + L
Sbjct: 377 PDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 436
Query: 495 -----DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
IPV +KYI++P MHSMP+++ PN WLA QS+DN+ILI+S RF+LN+KK F
Sbjct: 437 RVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRF 496
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
GH+VAGYAC ++FSPD +++SGD +GKC+ WDWK+ K+F+ K H+GVCI WHP E
Sbjct: 497 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLE 556
Query: 610 PSKVVTAGWD 619
SKV T GWD
Sbjct: 557 QSKVATCGWD 566
Score = 128 (50.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 47/151 (31%), Positives = 69/151 (45%)
Query: 30 AFSVAKSLSVCATPAVIPKVMES-SNLTDVNTKEITKNLRYEELYAPEYGPVNPFLTQQ- 87
A S A + A + V +S S D + N +++L+AP +GP +P+
Sbjct: 28 AKSSAPEVDDTALALTVANVNQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGI 87
Query: 88 QRADKNTLSGFVEQAHINSFQFENQRRTFASYGYALDPSSEVESKVIGASTSGDKNK--T 145
+ +N G VE A I SF FE Q TF GYA DPS +G + KN +
Sbjct: 88 AQGMRNHKLGSVEDASIGSFGFEEQYHTFHKCGYAADPSG---MNYVGDVEAFKKNDGLS 144
Query: 146 VF---ESTSKR-PLDKRKRNRN--DCPEDIE 170
VF +S KR +++ K R + E+IE
Sbjct: 145 VFNIPQSEQKRRKIERSKEEREGEEKKEEIE 175
Score = 63 (27.2 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 31/153 (20%), Positives = 56/153 (36%)
Query: 490 DKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQS-MDNKILIFSALNRFKLNRKKT 548
+ H IP + + + A+ P L + MD K+ I+ N K R T
Sbjct: 264 NNDHCYIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMR--T 321
Query: 549 FEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH 608
+ GH A + FS D S ++ D WD +T ++ + + L
Sbjct: 322 YMGHAKA--VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 609 EPSKVVTAGWDAATAKVQDANIVKIAVEMEKQV 641
+ ++ AG D N ++ E ++ +
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGEVTQEYDQHL 412
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 612 (220.5 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
Identities = 131/350 (37%), Positives = 195/350 (55%)
Query: 283 EEKTILHIKDPT-DYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAI 341
+E+TILH KD DYQ RS++H P+DVG NL + C++PK + TW+GHTKGIS +
Sbjct: 214 KEETILH-KDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHTKGISCL 272
Query: 342 RWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWF 401
R+FP S HLLLS SMD ++K+WEVY +R +RT+ GH + +RD+ F+ G +F
Sbjct: 273 RFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSF------- 325
Query: 402 PKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR--QAVRDICFNNTGTNFISAGYDRY 459
LS S D +KLW+ + +C+ + R V+ + F++ D+
Sbjct: 326 -------LSTSFDKTIKLWDT-ELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKR 377
Query: 460 LKLWDTESGECISRFTSR-----KVAYCV---KFHPDEDKQHLDI-----PVDMKYIADP 506
+ +D S + + + + + +F D + PV +K++AD
Sbjct: 378 ILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADI 437
Query: 507 TMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPD 566
MHSMP V PN K +ACQS+DN I ++SA +++ N+KK F+G+ +GY+ + FSPD
Sbjct: 438 AMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPD 497
Query: 567 MSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
++ SGD+ G WDWKT KL K AH G S +HP E SKV T+
Sbjct: 498 GRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATS 547
Score = 141 (54.7 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 10 SSSESDAESQTLHLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDV-NTKEITKNLR 68
S SE SQ+ +++P+ ++L+ PAV+ V + ++ N++E+ +N+
Sbjct: 8 SDSEEQENSQSPNIQPLLH-----TENLA----PAVVDNVKDDLIVSKGGNSRELARNVP 58
Query: 69 YEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFASYGYALDPSSE 128
E+ P GP NPF+T++Q + KN+++G+ E+ ++ +F F NQ Y YA
Sbjct: 59 VNEMVQPALGPANPFVTKEQDSIKNSITGYAEREYVPNFVF-NQE-----Y-YA------ 105
Query: 129 VESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRNDC--PEDIEG---FLGPFENQRRTF 183
+ I + D N+ + KR K K R D P +EG + GP+
Sbjct: 106 -NTHAIYGKRNFDDNEATTSTDLKRKSQKIKERREDPGDPSILEGDGAYKGPWAGYGSEQ 164
Query: 184 ASYGYALDPSSEVESKVIGASMSGDKN 210
+S EVES + + + N
Sbjct: 165 SSSPLEYSEYEEVESLDVKSEKDTESN 191
Score = 68 (29.0 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 208 DKNKTVFESTSKRPLDKRKRNRNDC--PEDIEG---FLGPWGGYTDEEKVS 253
D N+ + KR K K R D P +EG + GPW GY E+ S
Sbjct: 117 DDNEATTSTDLKRKSQKIKERREDPGDPSILEGDGAYKGPWAGYGSEQSSS 167
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 793 LWQ--QERTSREEWESHAKPIVEL 814
+W+ +R+ ++ HA+PI +L
Sbjct: 293 IWEVYHDRSLLRTFQGHARPIRDL 316
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 549 (198.3 bits), Expect = 2.6e-58, Sum P(2) = 2.6e-58
Identities = 121/351 (34%), Positives = 186/351 (52%)
Query: 283 EEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIR 342
+E T H + DYQGR+++H P D+ +LR + ++PK VH W+ HTK I+++
Sbjct: 198 DETTTFHGSELHDYQGRTYMHVPQDLDIDLRKEPGSTTNYIPKKMVHQWKHHTKAITSLN 257
Query: 343 WFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFP 402
+FP S HLLLS S D VK+W+VY +R +RTY GH +++ D FN G F+SA
Sbjct: 258 FFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFNTHGDKFLSA----- 312
Query: 403 KSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR--QAVRDICFNNTGTNFISAGYDRYL 460
S D +KLW+ + +C+ + + VR + G F++ D +
Sbjct: 313 ---------SFDRMMKLWDT-ETGKCIAKFTTGKTPHVVRFNPTSELGHEFVAGMSDNKI 362
Query: 461 KLWDTESG-ECISRFTSR-----KVAYCV---KFHPDEDKQHL-----DIPVDMKYIADP 506
+DT +G E + + + +C +F D + L V +KYIA+P
Sbjct: 363 VQFDTRAGNETVQEYDHHLGPVNTITFCDDGRRFMTTSDDRTLRAWEYGFGVPIKYIAEP 422
Query: 507 TMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPD 566
+ +M + P+ K++A QS DN+I+++S+ ++F+ NRKK++ GH AG A +D S D
Sbjct: 423 YLFAMTRAATHPSGKYVAYQSSDNQIVVYSSNDKFRQNRKKSYRGHNNAGSAIDIDISAD 482
Query: 567 MSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAG 617
+L SGD G WDWK+ K+F K + DG WHP E SKV T G
Sbjct: 483 GQFLASGDTGGYVAFWDWKSCKMFHKIQVEDGQVSCVKWHPQESSKVATGG 533
Score = 84 (34.6 bits), Expect = 2.6e-58, Sum P(2) = 2.6e-58
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 70 EELYAPEYGPVNPFLTQQQRAD-----KNTLSGFVEQAHINSFQFENQRRTFASYGYALD 124
E+L P++GP NPF A KN L+GF E+ ++ F ++ R G
Sbjct: 35 EDLARPKFGPSNPFRDDSSAASASQKRKNVLTGFAEETFVSEHTFRSKHRAVERRG---G 91
Query: 125 PSSEVES 131
P E +S
Sbjct: 92 PEREFQS 98
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 526 (190.2 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 114/318 (35%), Positives = 173/318 (54%)
Query: 322 FLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQA 381
F PK ++HT++GH G+ IR+FPK + LLS S+D +KLW VYK + C+RTY GH +
Sbjct: 316 FPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKG 375
Query: 382 VRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRD 441
V+D+ F+N G++F LSCS D V W+ E+ ++ Y ++
Sbjct: 376 VKDVLFDNDGSSF--------------LSCSYDNNVIYWDT--EYGKIKGIYNQKKTPYC 419
Query: 442 ICFNNTGTN-FISAGYDRYLKLWDTESGECISRFTSR-----KVAYCVK----FHPDEDK 491
+C N TN F+ G + + D +G + + C +DK
Sbjct: 420 LCLNPDDTNTFLVGGANNKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDK 479
Query: 492 Q----HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKK 547
+ +PV +KYI+D +M S+ +V+ P+N + CQSM+N I ++ A +F+L KK
Sbjct: 480 KIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKK 539
Query: 548 TFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
TF+GH GY+ ++ S D Y+ISGD++G +IW+WK FK KAH VCI +WHP
Sbjct: 540 TFKGHHNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHP 599
Query: 608 HEPSKVVTAGWDAATAKV 625
+ S + TA WD T K+
Sbjct: 600 FKTSMLATASWDG-TIKL 616
Score = 255 (94.8 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 364 EVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVY 423
E + ++ + TY GH+ V+ I R+FPK + LLS S+D +KLW VY
Sbjct: 314 ENFPPKKEIHTYKGHKMGVQKI-------------RFFPKYGNYLLSASLDNTLKLWSVY 360
Query: 424 KEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCV 483
K C+RTY GH + V+D+ F+N G++F+S YD + WDTE G+ + +K YC+
Sbjct: 361 KSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCL 420
Query: 484 KFHPDEDKQ-----------HLDIP---VDMKYIADPTMHSMPAVTSSPNNKWLACQSMD 529
+PD+ H+D ++++Y + + ++ +T NNK L S D
Sbjct: 421 CLNPDDTNTFLVGGANNKICHIDFRTGNIELEY--NEHLQAINTITLCENNKKLISTSDD 478
Query: 530 NKILIF 535
KI I+
Sbjct: 479 KKIFIW 484
Score = 81 (33.6 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 72 LYAPEYGP-VNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFASYGYALDPSSEVE 130
L P+ GP +N + +KN +G +E +N F+ Q F G A +P+ +
Sbjct: 97 LNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAENPALKNY 156
Query: 131 SKVIGASTSGDKN----KTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQ 179
K A+ KN K + E + + K+KR++N+ ++ + GP+E +
Sbjct: 157 YKNNYANYLVAKNINERKNMHEDLNFKK-HKKKRSKNNDDNMLDKYKGPWEEK 208
Score = 51 (23.0 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 158 RKRNRNDCPEDIEG-FLGP--FENQRRTFASYGYALDPSSEVESKVIGASMSGDKN---- 210
+ N+N IE F+ F+ Q F G A +P+ + K A+ KN
Sbjct: 114 KNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAENPALKNYYKNNYANYLVAKNINER 173
Query: 211 KTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPW 243
K + E + + K+KR++N+ ++ + GPW
Sbjct: 174 KNMHEDLNFKK-HKKKRSKNNDDNMLDKYKGPW 205
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 526 (190.2 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 114/318 (35%), Positives = 173/318 (54%)
Query: 322 FLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQA 381
F PK ++HT++GH G+ IR+FPK + LLS S+D +KLW VYK + C+RTY GH +
Sbjct: 316 FPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKG 375
Query: 382 VRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRD 441
V+D+ F+N G++F LSCS D V W+ E+ ++ Y ++
Sbjct: 376 VKDVLFDNDGSSF--------------LSCSYDNNVIYWDT--EYGKIKGIYNQKKTPYC 419
Query: 442 ICFNNTGTN-FISAGYDRYLKLWDTESGECISRFTSR-----KVAYCVK----FHPDEDK 491
+C N TN F+ G + + D +G + + C +DK
Sbjct: 420 LCLNPDDTNTFLVGGANNKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDK 479
Query: 492 Q----HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKK 547
+ +PV +KYI+D +M S+ +V+ P+N + CQSM+N I ++ A +F+L KK
Sbjct: 480 KIFIWEYGLPVVVKYISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKK 539
Query: 548 TFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
TF+GH GY+ ++ S D Y+ISGD++G +IW+WK FK KAH VCI +WHP
Sbjct: 540 TFKGHHNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHP 599
Query: 608 HEPSKVVTAGWDAATAKV 625
+ S + TA WD T K+
Sbjct: 600 FKTSMLATASWDG-TIKL 616
Score = 255 (94.8 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 364 EVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVY 423
E + ++ + TY GH+ V+ I R+FPK + LLS S+D +KLW VY
Sbjct: 314 ENFPPKKEIHTYKGHKMGVQKI-------------RFFPKYGNYLLSASLDNTLKLWSVY 360
Query: 424 KEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCV 483
K C+RTY GH + V+D+ F+N G++F+S YD + WDTE G+ + +K YC+
Sbjct: 361 KSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCL 420
Query: 484 KFHPDEDKQ-----------HLDIP---VDMKYIADPTMHSMPAVTSSPNNKWLACQSMD 529
+PD+ H+D ++++Y + + ++ +T NNK L S D
Sbjct: 421 CLNPDDTNTFLVGGANNKICHIDFRTGNIELEY--NEHLQAINTITLCENNKKLISTSDD 478
Query: 530 NKILIF 535
KI I+
Sbjct: 479 KKIFIW 484
Score = 81 (33.6 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 72 LYAPEYGP-VNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFASYGYALDPSSEVE 130
L P+ GP +N + +KN +G +E +N F+ Q F G A +P+ +
Sbjct: 97 LNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAENPALKNY 156
Query: 131 SKVIGASTSGDKN----KTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQ 179
K A+ KN K + E + + K+KR++N+ ++ + GP+E +
Sbjct: 157 YKNNYANYLVAKNINERKNMHEDLNFKK-HKKKRSKNNDDNMLDKYKGPWEEK 208
Score = 51 (23.0 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 158 RKRNRNDCPEDIEG-FLGP--FENQRRTFASYGYALDPSSEVESKVIGASMSGDKN---- 210
+ N+N IE F+ F+ Q F G A +P+ + K A+ KN
Sbjct: 114 KNENKNHYNGSIETTFVNKNIFDYQYNQFNVTGIAENPALKNYYKNNYANYLVAKNINER 173
Query: 211 KTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPW 243
K + E + + K+KR++N+ ++ + GPW
Sbjct: 174 KNMHEDLNFKK-HKKKRSKNNDDNMLDKYKGPW 205
>FB|FBgn0032409 [details] [associations]
symbol:Ced-12 "Ced-12" species:7227 "Drosophila melanogaster"
[GO:0016477 "cell migration" evidence=IGI] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0007298 "border follicle cell migration"
evidence=IMP] [GO:0032863 "activation of Rac GTPase activity"
evidence=IGI] [GO:0007520 "myoblast fusion" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335 GO:GO:0005875
GO:GO:0007015 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GO:GO:0007417 GO:GO:0007298 GO:GO:0007520 GO:GO:0032863
eggNOG:NOG295208 InterPro:IPR024574 Pfam:PF11841 ChiTaRS:ELMO1
EMBL:AY119153 ProteinModelPortal:Q8MS15 SMR:Q8MS15 STRING:Q8MS15
PaxDb:Q8MS15 PRIDE:Q8MS15 FlyBase:FBgn0032409 InParanoid:Q8MS15
OrthoDB:EOG4NVX1B ArrayExpress:Q8MS15 Bgee:Q8MS15 Uniprot:Q8MS15
Length = 724
Score = 372 (136.0 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 71/114 (62%), Positives = 89/114 (78%)
Query: 730 EFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISRLTYSE 789
EF+CIC++ LN+TWK+MRAT EDF FSVVREQI R L +P +LD FR I+ LTY +
Sbjct: 452 EFFCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPENLDDFRNKIALLTYQQ 511
Query: 790 ITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKY 843
IT L QQERTS+EE +S A IV+LKE I+P+I++LI+QQRL +LVEGT F KY
Sbjct: 512 ITTLRQQERTSKEECDSTASAIVKLKEKISPQILELIKQQRLSFLVEGTHFAKY 565
Score = 368 (134.6 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 922 RATTEDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTH 981
R T+ + K+V ENSCRADEHECPFGRTS+ELVK LC+ILRIG+ P+EQ ++ PMFFTH
Sbjct: 387 RNYTQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIGEPPAEQSGDFQPMFFTH 446
Query: 982 DHPFEEFYCICIVLLNKTWKEMRATTEDF 1010
D PFEEF+CIC++ LN+TWK+MRAT EDF
Sbjct: 447 DSPFEEFFCICVITLNRTWKDMRATAEDF 475
Score = 353 (129.3 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 59/81 (72%), Positives = 72/81 (88%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++V ENSCRADEHECPFGRTS+ELVK LC+ILRIG+ P+EQ ++ PMFFTHD PFEEF+
Sbjct: 395 KIVRENSCRADEHECPFGRTSIELVKVLCDILRIGEPPAEQSGDFQPMFFTHDSPFEEFF 454
Query: 908 CICIVLLNKTWKEMRATTEDF 928
CIC++ LN+TWK+MRAT EDF
Sbjct: 455 CICVITLNRTWKDMRATAEDF 475
Score = 280 (103.6 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 59/102 (57%), Positives = 74/102 (72%)
Query: 625 VQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNY 684
V+D++IVKIAVE E + QL +Q L+S IQEIC+GWS+SD + YALQF E N+ Y
Sbjct: 8 VKDSHIVKIAVEREDHIAQLIYLDQRHPLASKIQEICNGWSISDHQNYALQFYEPTNRKY 67
Query: 685 ITEKNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEK 726
+TEKNRNEIKNGSVL+L +S SKTA D + L N S +EK
Sbjct: 68 VTEKNRNEIKNGSVLQLQYSPSKTACDAMEVLL--NGSPQEK 107
>ZFIN|ZDB-GENE-040426-2069 [details] [associations]
symbol:elmo1 "engulfment and cell motility 1
(ced-12 homolog, C. elegans)" species:7955 "Danio rerio"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0001946 "lymphangiogenesis" evidence=IMP]
[GO:0045766 "positive regulation of angiogenesis" evidence=IMP]
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335
ZFIN:ZDB-GENE-040426-2069 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005856 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GO:GO:0045766 GO:GO:0001946
eggNOG:NOG295208 GeneTree:ENSGT00390000014155 KO:K12366
InterPro:IPR024574 Pfam:PF11841 CTD:9844 HOGENOM:HOG000230985
OrthoDB:EOG42RD6S HOVERGEN:HBG051463 EMBL:CU634017 EMBL:CU928445
EMBL:CU633993 EMBL:BC068327 IPI:IPI00503646 RefSeq:NP_998256.1
UniGene:Dr.132530 Ensembl:ENSDART00000006805
Ensembl:ENSDART00000124214 Ensembl:ENSDART00000151729 GeneID:406364
KEGG:dre:406364 NextBio:20817980 Uniprot:Q6NV39
Length = 726
Score = 356 (130.4 bits), Expect = 9.5e-47, Sum P(2) = 9.5e-47
Identities = 71/122 (58%), Positives = 96/122 (78%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
+++ EF+CICI LLNKTWKEMRAT+EDF KV VV+EQITRAL+ +P SLD+F++ +
Sbjct: 448 DRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQITRALTIKPNSLDQFKSRLQN 507
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+Y+EI L Q ER ++E+++S +PI+EL+E I PEI++LI+QQRL L EGT F K S
Sbjct: 508 LSYTEILKLRQSERMNQEDFQS--RPILELREKIQPEIMELIKQQRLNRLCEGTCFRKIS 565
Query: 845 SR 846
SR
Sbjct: 566 SR 567
Score = 350 (128.3 bits), Expect = 4.5e-46, Sum P(2) = 4.5e-46
Identities = 66/119 (55%), Positives = 86/119 (72%)
Query: 896 FFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRTSVEL 953
F H +P +F I ++ L+ R + ++++VLENS R D+HECPFGR+S+EL
Sbjct: 360 FINHVNPAVDFTQIPPGMLALDNMLYFARHHQDAYIRIVLENSSREDKHECPFGRSSIEL 419
Query: 954 VKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVK 1012
K LCEIL++G+ PSE ++HPMFFTHD FEEF+CICI LLNKTWKEMRAT+EDF K
Sbjct: 420 TKMLCEILKVGELPSENCHDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNK 478
Score = 343 (125.8 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 396 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSENCHDFHPMFFTHDRSFEEFF 455
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 456 CICIQLLNKTWKEMRATSEDFNKVM 480
Score = 218 (81.8 bits), Expect = 9.5e-47, Sum P(2) = 9.5e-47
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GW+L + E YALQ ++ N YITE
Sbjct: 5 ADIVKVAIEWPGAFPKLMEIDQKKPLSAIIKEVCEGWNLPNPETYALQNADATNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
KNRN IKNGS+LRL SA++ A + ++ +++S++ K A
Sbjct: 64 KNRNNIKNGSILRLTTSAAQMAQQLHERI--QSSSMDMKLDA 103
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 454 (164.9 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 111/321 (34%), Positives = 163/321 (50%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVY-----KERRCVRTY 375
CF+PK +H + GH KGI+ +R+FP S HLLLSC D +KLW +Y K+ + +R +
Sbjct: 199 CFVPKRVIHIFPGHKKGINRLRFFPNSGHLLLSCGNDNLIKLWSIYNTFQGKQYQLLRIF 258
Query: 376 YGHRQAVRDICFNNTGTNFISA-----IR-WFPKSAHLLLSCSMDCRVKLWEVYKEHRCV 429
GH V+DI FN +G F+S IR W K+ ++ S + + ++ +
Sbjct: 259 KGHNLPVKDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIKLKSIPNVL-LFNPNNKN 317
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T + V F +F S Y ++++D G I+ S + + D+
Sbjct: 318 NTEF----IVGLSNFTIEHYDFNSIQYTNPIQIYDHHQGS-INDLKSLGLDKFISSSDDK 372
Query: 490 DKQ----HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR 545
+ ++IP+ K I DP+ HS+P + P ++A QSMDN I + + +FK +
Sbjct: 373 TVRIWSWQINIPI--KVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVIHSYGKFKWYK 430
Query: 546 KKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCIST-- 603
KK F GH +AGY +DFSPD L+SGD +G Y WDWKT KL KK K D +T
Sbjct: 431 KKFFTGHQIAGYGIEIDFSPDGKILMSGDCNGFAYFWDWKTCKLIKKLKIIDNTTTTTTK 490
Query: 604 -------LWHPHEPSKVVTAG 617
+ HP E SKV AG
Sbjct: 491 KKPLTCIVAHPQETSKVAIAG 511
Score = 47 (21.6 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 32/171 (18%), Positives = 71/171 (41%)
Query: 4 LQDYGGSSSESDAES--QTLHLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDV--N 59
LQ Y SSS S S + + +P + A S ++ + +N + N
Sbjct: 4 LQGYSSSSSSSSGSSDDEKDNERPPFKKVKTFAGSFQQISSSILENDTFHINNDRKISNN 63
Query: 60 TKEITKNLRYEEL-YAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQFENQRRTFAS 118
K++ K L+ + YG ++P+ T ++N + A+ N+ EN++ S
Sbjct: 64 AKKLAKQLKRQRYKQGSRYG-IDPW-TNNSSDNENNANN---NANNNNNNNENEQN-IPS 117
Query: 119 YGYALDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRNDCPEDI 169
++ ++ E + ++T+ + E ++ D + R+ P+++
Sbjct: 118 SNIEIEDNNHEEITSVVSTTNNYTFEPSSEFVGEQEFDYQGRSYMTIPKNL 168
Score = 41 (19.5 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 295 DYQGRSFLHPPHDV 308
DYQGRS++ P ++
Sbjct: 155 DYQGRSYMTIPKNL 168
>UNIPROTKB|E2R7G8 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030036 "actin cytoskeleton organization"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
GO:GO:0005886 GO:GO:0005737 GO:GO:0006911 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036 GO:GO:0006928
GO:GO:0016601 GeneTree:ENSGT00390000014155 KO:K12366
InterPro:IPR024574 Pfam:PF11841 CTD:9844 OMA:RADEHEC
EMBL:AAEX03009436 EMBL:AAEX03009437 RefSeq:XP_852411.1
Ensembl:ENSCAFT00000005255 GeneID:612913 KEGG:cfa:612913
Uniprot:E2R7G8
Length = 727
Score = 359 (131.4 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 75/149 (50%), Positives = 106/149 (71%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L++ S+T +D + S EE F+CICI LLNKTWKEMRAT+EDF KV
Sbjct: 427 ILKVGELPSETCNDFHPMFFTHDRSFEE-----FFCICIQLLNKTWKEMRATSEDFNKVM 481
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VV+EQ+ RAL+++P+SLD+F+ + L+Y+EI + Q ER ++E+++S +PI+ELKE
Sbjct: 482 QVVKEQVMRALTTKPSSLDQFKCKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEK 539
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I PEI++LI+QQRL LVEGT F K +SR
Sbjct: 540 IQPEILELIKQQRLNRLVEGTCFRKLNSR 568
Score = 344 (126.2 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 59/85 (69%), Positives = 73/85 (85%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEE
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEE 454
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
F+CICI LLNKTWKEMRAT+EDF K
Sbjct: 455 FFCICIQLLNKTWKEMRATSEDFNK 479
Score = 342 (125.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFF 456
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 457 CICIQLLNKTWKEMRATSEDFNKVM 481
Score = 223 (83.6 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 46/99 (46%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
Score = 43 (20.2 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 10/64 (15%), Positives = 33/64 (51%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ I+++ + QL++ Q+ ++ + ++ + SLS +A +F + +
Sbjct: 68 EIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGIS 127
Query: 684 YITE 687
+T+
Sbjct: 128 LLTQ 131
>UNIPROTKB|Q92556 [details] [associations]
symbol:ELMO1 "Engulfment and cell motility protein 1"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IGI] [GO:0006911
"phagocytosis, engulfment" evidence=IGI] [GO:0006928 "cellular
component movement" evidence=IGI] [GO:0016601 "Rac protein signal
transduction" evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=NAS] [GO:0017124 "SH3 domain binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0050690 "regulation of
defense response to virus by virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001849
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 SMART:SM00233 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_116125 GO:GO:0006915 GO:GO:0006911 GO:GO:0050690
GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0030036 EMBL:CH471073 GO:GO:0006928
Pathway_Interaction_DB:trkrpathway GO:GO:0016601 EMBL:CH236951
eggNOG:NOG295208 KO:K12366 InterPro:IPR024574 Pfam:PF11841 PDB:2RQR
PDB:3A98 PDBsum:2RQR PDBsum:3A98 EMBL:AF398885 EMBL:D87457
EMBL:AL136787 EMBL:AK126565 EMBL:BC003051 EMBL:BC064635
EMBL:BC077074 EMBL:BC114341 IPI:IPI00022004 IPI:IPI00219532
IPI:IPI00745455 RefSeq:NP_001034548.1 RefSeq:NP_001193409.1
RefSeq:NP_001193411.1 RefSeq:NP_055615.8 UniGene:Hs.434989 PDB:2VSZ
PDBsum:2VSZ ProteinModelPortal:Q92556 SMR:Q92556 DIP:DIP-31095N
IntAct:Q92556 MINT:MINT-238417 STRING:Q92556 PhosphoSite:Q92556
DMDM:30923321 PaxDb:Q92556 PeptideAtlas:Q92556 PRIDE:Q92556
DNASU:9844 Ensembl:ENST00000310758 Ensembl:ENST00000341056
Ensembl:ENST00000396040 Ensembl:ENST00000396045
Ensembl:ENST00000442504 Ensembl:ENST00000448602 GeneID:9844
KEGG:hsa:9844 UCSC:uc003tfi.2 UCSC:uc003tfk.2 CTD:9844
GeneCards:GC07M036860 HGNC:HGNC:16286 HPA:HPA017941 MIM:606420
neXtProt:NX_Q92556 PharmGKB:PA27754 HOGENOM:HOG000230985
HOVERGEN:HBG055277 InParanoid:Q92556 OMA:RADEHEC OrthoDB:EOG42RD6S
ChiTaRS:ELMO1 EvolutionaryTrace:Q92556 GenomeRNAi:9844
NextBio:37098 ArrayExpress:Q92556 Bgee:Q92556 CleanEx:HS_ELMO1
Genevestigator:Q92556 GermOnline:ENSG00000155849 Uniprot:Q92556
Length = 727
Score = 357 (130.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 74/149 (49%), Positives = 107/149 (71%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L++ S+T +D + S EE F+CICI LLNKTWKEMRAT+EDF KV
Sbjct: 427 ILKVGELPSETCNDFHPMFFTHDRSFEE-----FFCICIQLLNKTWKEMRATSEDFNKVM 481
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE
Sbjct: 482 QVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEK 539
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I PEI++LI+QQRL LVEGT F K ++R
Sbjct: 540 IQPEILELIKQQRLNRLVEGTCFRKLNAR 568
Score = 344 (126.2 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 59/85 (69%), Positives = 73/85 (85%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEE
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEE 454
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
F+CICI LLNKTWKEMRAT+EDF K
Sbjct: 455 FFCICIQLLNKTWKEMRATSEDFNK 479
Score = 342 (125.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFF 456
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 457 CICIQLLNKTWKEMRATSEDFNKVM 481
Score = 223 (83.6 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 46/99 (46%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
Score = 43 (20.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 10/64 (15%), Positives = 33/64 (51%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ I+++ + QL++ Q+ ++ + ++ + SLS +A +F + +
Sbjct: 68 EIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGIS 127
Query: 684 YITE 687
+T+
Sbjct: 128 LLTQ 131
>UNIPROTKB|F1MQH0 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0016601 "Rac
protein signal transduction" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0006911 "phagocytosis,
engulfment" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
GO:GO:0005886 GO:GO:0005737 GO:GO:0006911 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036 GO:GO:0006928
GO:GO:0016601 GeneTree:ENSGT00390000014155 KO:K12366
InterPro:IPR024574 Pfam:PF11841 CTD:9844 OMA:RADEHEC
EMBL:DAAA02010781 EMBL:DAAA02010782 EMBL:DAAA02010783
EMBL:DAAA02010784 EMBL:DAAA02010785 EMBL:DAAA02010786
IPI:IPI00702069 RefSeq:NP_001106698.1 UniGene:Bt.16985
Ensembl:ENSBTAT00000039193 GeneID:509821 KEGG:bta:509821
NextBio:20869149 ArrayExpress:F1MQH0 Uniprot:F1MQH0
Length = 727
Score = 355 (130.0 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 74/149 (49%), Positives = 106/149 (71%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L++ S+T +D + S EE F+CICI LLNKTWKEMRAT+EDF KV
Sbjct: 427 ILKVGELPSETCNDFHPMFFTHDRSFEE-----FFCICIQLLNKTWKEMRATSEDFNKVM 481
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE
Sbjct: 482 QVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEK 539
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I PEI++LI+QQRL LVEGT F K + R
Sbjct: 540 IQPEILELIKQQRLNRLVEGTCFRKLNCR 568
Score = 344 (126.2 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 59/85 (69%), Positives = 73/85 (85%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEE
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEE 454
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
F+CICI LLNKTWKEMRAT+EDF K
Sbjct: 455 FFCICIQLLNKTWKEMRATSEDFNK 479
Score = 342 (125.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFF 456
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 457 CICIQLLNKTWKEMRATSEDFNKVM 481
Score = 223 (83.6 bits), Expect = 6.3e-46, Sum P(2) = 6.3e-46
Identities = 46/99 (46%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
Score = 43 (20.2 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 10/64 (15%), Positives = 33/64 (51%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ I+++ + QL++ Q+ ++ + ++ + SLS +A +F + +
Sbjct: 68 EIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGIS 127
Query: 684 YITE 687
+T+
Sbjct: 128 LLTQ 131
>MGI|MGI:2153044 [details] [associations]
symbol:Elmo1 "engulfment and cell motility 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0006909 "phagocytosis" evidence=IDA] [GO:0006911 "phagocytosis,
engulfment" evidence=ISO;ISS] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006928 "cellular component movement"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016601
"Rac protein signal transduction" evidence=ISO;ISS] [GO:0017124
"SH3 domain binding" evidence=ISO] [GO:0030029 "actin
filament-based process" evidence=IDA] [GO:0030036 "actin
cytoskeleton organization" evidence=ISO;ISS] InterPro:IPR001849
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 SMART:SM00233 MGI:MGI:2153044 GO:GO:0005886
GO:GO:0005737 GO:GO:0006915 GO:GO:0006911 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036 GO:GO:0006928
GO:GO:0016601 eggNOG:NOG295208 GeneTree:ENSGT00390000014155
KO:K12366 InterPro:IPR024574 Pfam:PF11841 CTD:9844 OMA:RADEHEC
OrthoDB:EOG42RD6S EMBL:AF398883 EMBL:AK028389 EMBL:AK053306
EMBL:BC024727 EMBL:BC031782 IPI:IPI00131428 IPI:IPI00310489
IPI:IPI00310490 IPI:IPI00310491 RefSeq:NP_525027.1
UniGene:Mm.342392 ProteinModelPortal:Q8BPU7 SMR:Q8BPU7
IntAct:Q8BPU7 MINT:MINT-219471 STRING:Q8BPU7 PhosphoSite:Q8BPU7
PaxDb:Q8BPU7 PRIDE:Q8BPU7 Ensembl:ENSMUST00000072519
Ensembl:ENSMUST00000165249 GeneID:140580 KEGG:mmu:140580
UCSC:uc007ppn.1 UCSC:uc007ppo.1 UCSC:uc007ppq.1 UCSC:uc007ppr.1
HOGENOM:HOG000252986 HOVERGEN:HBG051463 InParanoid:Q8BPU7
NextBio:369899 Bgee:Q8BPU7 Genevestigator:Q8BPU7
GermOnline:ENSMUSG00000041112 Uniprot:Q8BPU7
Length = 727
Score = 357 (130.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 74/149 (49%), Positives = 107/149 (71%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L++ S+T +D + S EE F+CICI LLNKTWKEMRAT+EDF KV
Sbjct: 427 ILKVGELPSETCNDFHPMFFTHDRSFEE-----FFCICIQLLNKTWKEMRATSEDFNKVM 481
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE
Sbjct: 482 QVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEK 539
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I PEI++LI+QQRL LVEGT F K ++R
Sbjct: 540 IQPEILELIKQQRLNRLVEGTCFRKLNAR 568
Score = 344 (126.2 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 59/85 (69%), Positives = 73/85 (85%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEE
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEE 454
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
F+CICI LLNKTWKEMRAT+EDF K
Sbjct: 455 FFCICIQLLNKTWKEMRATSEDFNK 479
Score = 342 (125.4 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFF 456
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 457 CICIQLLNKTWKEMRATSEDFNKVM 481
Score = 220 (82.5 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 45/99 (45%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 SDIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
Score = 43 (20.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 10/64 (15%), Positives = 33/64 (51%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ I+++ + QL++ Q+ ++ + ++ + SLS +A +F + +
Sbjct: 68 EIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGIS 127
Query: 684 YITE 687
+T+
Sbjct: 128 LLTQ 131
>RGD|1308182 [details] [associations]
symbol:Elmo1 "engulfment and cell motility 1" species:10116
"Rattus norvegicus" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006909 "phagocytosis" evidence=IEA;ISO]
[GO:0006911 "phagocytosis, engulfment" evidence=ISO] [GO:0006928
"cellular component movement" evidence=ISO] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017124 "SH3 domain
binding" evidence=ISO] [GO:0030029 "actin filament-based process"
evidence=ISO] [GO:0030036 "actin cytoskeleton organization"
evidence=ISO] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
RGD:1308182 GO:GO:0005886 GO:GO:0005737 GO:GO:0006911
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036
GO:GO:0006928 GO:GO:0016601 GeneTree:ENSGT00390000014155 KO:K12366
InterPro:IPR024574 Pfam:PF11841 CTD:9844 OMA:RADEHEC
OrthoDB:EOG42RD6S EMBL:CH474072 IPI:IPI00193662
RefSeq:NP_001101885.1 UniGene:Rn.24911 SMR:D3ZY46
Ensembl:ENSRNOT00000025516 GeneID:361251 KEGG:rno:361251
UCSC:RGD:1308182 NextBio:675697 Uniprot:D3ZY46
Length = 727
Score = 357 (130.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 74/149 (49%), Positives = 107/149 (71%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L++ S+T +D + S EE F+CICI LLNKTWKEMRAT+EDF KV
Sbjct: 427 ILKVGELPSETCNDFHPMFFTHDRSFEE-----FFCICIQLLNKTWKEMRATSEDFNKVM 481
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE
Sbjct: 482 QVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEK 539
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I PEI++LI+QQRL LVEGT F K ++R
Sbjct: 540 IQPEILELIKQQRLNRLVEGTCFRKLNAR 568
Score = 344 (126.2 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 59/85 (69%), Positives = 73/85 (85%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEE
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEE 454
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
F+CICI LLNKTWKEMRAT+EDF K
Sbjct: 455 FFCICIQLLNKTWKEMRATSEDFNK 479
Score = 342 (125.4 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ PSE ++HPMFFTHD FEEF+
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFF 456
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
CICI LLNKTWKEMRAT+EDF KV+
Sbjct: 457 CICIQLLNKTWKEMRATSEDFNKVM 481
Score = 220 (82.5 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 45/99 (45%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 SDIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
Score = 43 (20.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 10/64 (15%), Positives = 33/64 (51%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ I+++ + QL++ Q+ ++ + ++ + SLS +A +F + +
Sbjct: 68 EIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGIS 127
Query: 684 YITE 687
+T+
Sbjct: 128 LLTQ 131
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 484 (175.4 bits), Expect = 3.8e-45, P = 3.8e-45
Identities = 134/459 (29%), Positives = 214/459 (46%)
Query: 187 GYALDPSSEVESKVIGASMSGDKNKTVFESTSKRP----LDKRKRN--RNDCP---EDIE 237
GY S++ G S+ KN + E TS P + KRK + +++ + +
Sbjct: 6 GYDTSSDSDLNFDE-GKSVHEKKNGNLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRK 64
Query: 238 GFLGPWGGYTD-EEKVSRPNXXXXXXXXXXXXXXXXXXXXXXXXPLEEKTILHIKDPTDY 296
G GPWG ++ +++ S+ + +EE + + K DY
Sbjct: 65 GD-GPWGSWSSSDDETSQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHFYGKSEKDY 123
Query: 297 QGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSM 356
QGR +L+PP+DV +LR + RC+LPK + + GH +G +A+++ PK+ HL+LS
Sbjct: 124 QGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTGHLILSGGN 183
Query: 357 DCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCR 416
D +K+W+ Y + C+R + GH + ++ A+R F + LS S D
Sbjct: 184 DHTIKIWDFYHDYECLRDFQGHNKPIK-------------ALR-FTEDCQSFLSSSFDRS 229
Query: 417 VKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKL-WD---TESGECIS 472
VK+W+ E V+T D+ T + G L +D +E+ +
Sbjct: 230 VKIWDT--ETGKVKTRLHLNSTPADVESRPTNPHEFIVGLSNSKILHYDDRVSENQGLVQ 287
Query: 473 RFTSRKVAY-CVKFHPD--------EDKQ----HLDIPVDMKYIADPTMHSMPAVTSSPN 519
+ + +K+ PD EDK I V +K I+D HSMP + P+
Sbjct: 288 TYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPS 347
Query: 520 NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKC 579
+ QSMDN+I FS ++K + KK F+GH AGY SL FS D Y+ SGD+ +
Sbjct: 348 QNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRL 407
Query: 580 YIWDWKTTKLFKKWKAHDGVCISTL-WHPHEPSKVVTAG 617
+ WDW T++L K I+ + WHP E SKV+ +G
Sbjct: 408 FTWDWNTSRLLNNIKIPGNKPITQVDWHPQETSKVICSG 446
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 479 (173.7 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 126/444 (28%), Positives = 214/444 (48%)
Query: 176 FENQRRTFASYGYALDPSSEVE--SKVIGASMSGDKNKTVFESTSKRPLDKR-KRNRNDC 232
F Q RT+ S GY +P++ + + A+ G ++ + + + R KR +
Sbjct: 102 FTAQHRTYQSLGYTRNPTAPEQFVGNLDHAAQFGGRDVVQMKPSKEASAALRAKRQKKGD 161
Query: 233 PEDIEG---FLGPWGGYTDEEKVSRPNXXXXXXXXXXXXXXXXXXXXXXX-XPLEEKTIL 288
+EG +LGPW Y D+++V P K
Sbjct: 162 SSIVEGPGAYLGPWAKYQDDDQVYDEELGSDEELVEVDEDEEEQEQVGSAPMPAMSKEAT 221
Query: 289 HIKDPT--------------DYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGH 334
+D T DY GR+++H P D+ +L+ + ++PK VHTW+ H
Sbjct: 222 DYQDDTSKVETTEFHGSEQYDYLGRTYMHVPQDLDIDLKKPVGSIKNYVPKKLVHTWKSH 281
Query: 335 TKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNF 394
TK I+++R+FP++ HLLLS + D + K+W+VY R +RT+ GH +A+ D F+ TG F
Sbjct: 282 TKAITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFHITGKTF 341
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN---F 451
++A S D ++KLW+ + +C+ + + + I FN N F
Sbjct: 342 LTA--------------SYDRQMKLWDT-ETGQCI-SRFSTGKTPHVIRFNPNPENSHEF 385
Query: 452 ISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLD-------------IPV 498
++ D+ + +DT +GE + + A D++++ + IPV
Sbjct: 386 LAGMSDKKIVQFDTRTGEQVQEYDHHLAAINTLTFVDQNRRFISTSDDKSLRAWEYGIPV 445
Query: 499 DMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYA 558
+K+IA+P M ++ + PN K++A QS DN+I+++ A ++F+ NRKK+F GH AGYA
Sbjct: 446 PIKFIAEPYMFALTRAAAHPNGKYVAFQSGDNQIVVYGATDKFRQNRKKSFRGHNNAGYA 505
Query: 559 CSLDFSPDMSYLISGDADGKCYIW 582
L SPD ++ SGD+ G + W
Sbjct: 506 IDLTISPDGQFIASGDSAG-LFSW 528
Score = 125 (49.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 45/174 (25%), Positives = 73/174 (41%)
Query: 34 AKSLSVCATPAVIPKVMESSNLTDVNT--KEITKNLRYEELYAPEYGPVNPFLTQ---QQ 88
A + V A P V + + NT K +T N Y++L P GP NPF +
Sbjct: 22 ASAPKVVAAPEVNTEDQSHMRMMLANTSSKALTYNATYDDLSRPSQGPSNPFKSAGAGNG 81
Query: 89 RADKNTLSGFVEQAHINSFQFENQRRTFASYGYALDPSSEVE--SKVIGASTSGDKNKTV 146
KN +G+ E A I+ F Q RT+ S GY +P++ + + A+ G ++
Sbjct: 82 LKRKNVPTGYAEAAAISESTFTAQHRTYQSLGYTRNPTAPEQFVGNLDHAAQFGGRDVVQ 141
Query: 147 FESTSKRPLDKR-KRNRNDCPEDIEG---FLGPFENQRRTFASYGYALDPSSEV 196
+ + + R KR + +EG +LGP+ + Y L E+
Sbjct: 142 MKPSKEASAALRAKRQKKGDSSIVEGPGAYLGPWAKYQDDDQVYDEELGSDEEL 195
Score = 76 (31.8 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 548 TFEGHMVAGYACSLDFSPDMSYLI-SGDADGKCYIWD-WKTTKLFKKWKAHDGVCISTLW 605
T++ H A SL F P +L+ S ADGK IWD + + +L + + H T +
Sbjct: 277 TWKSHTKA--ITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDF 334
Query: 606 HPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEK-QVPQLYQFN 648
H + +TA +D K+ D + + P + +FN
Sbjct: 335 HITGKT-FLTASYDRQM-KLWDTETGQCISRFSTGKTPHVIRFN 376
>UNIPROTKB|E2RF34 [details] [associations]
symbol:ELMO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
GO:GO:0005829 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016020 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GO:GO:0060326
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
CTD:63916 OMA:GEMLAFT EMBL:AAEX03013978 RefSeq:XP_866792.2
Ensembl:ENSCAFT00000016446 GeneID:477251 KEGG:cfa:477251
Uniprot:E2RF34
Length = 720
Score = 338 (124.0 bits), Expect = 6.4e-42, Sum P(2) = 6.4e-42
Identities = 70/122 (57%), Positives = 91/122 (74%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P+SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPSSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 6.6e-40, Sum P(2) = 6.6e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 191 (72.3 bits), Expect = 6.4e-42, Sum P(2) = 6.4e-42
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
+ R++IKNG++L+LA S S+ A ++ + N
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERTQSSN 96
>UNIPROTKB|A6QR40 [details] [associations]
symbol:ELMO3 "Engulfment and cell motility protein 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 GO:GO:0005737 GO:GO:0006915 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909 eggNOG:NOG295208
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
HOGENOM:HOG000230985 EMBL:BC150105 IPI:IPI00724540
RefSeq:NP_001095561.1 UniGene:Bt.13828 ProteinModelPortal:A6QR40
Ensembl:ENSBTAT00000001696 GeneID:525427 KEGG:bta:525427 CTD:79767
InParanoid:A6QR40 OMA:NFCYDCS OrthoDB:EOG4N5VWM NextBio:20874167
Uniprot:A6QR40
Length = 652
Score = 307 (113.1 bits), Expect = 7.7e-42, Sum P(2) = 7.7e-42
Identities = 74/165 (44%), Positives = 99/165 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L + S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLHVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVSIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P+SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPSSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EGT F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGTLFHKISSRRRQDKLWFCCLSPNHK 571
Score = 263 (97.6 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 48/89 (53%), Positives = 63/89 (70%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LC++L +G+ SE ++ PMFF D F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCDLLHVGEPCSETAQDFSPMFFGQDQSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVSIQLLNKTWKEMRATQEDFDKVM 468
Score = 259 (96.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 50/123 (40%), Positives = 75/123 (60%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R+
Sbjct: 344 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARS 403
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LC++L +G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 404 SIQLTVLLCDLLHVGEPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQED 463
Query: 1010 FVK 1012
F K
Sbjct: 464 FDK 466
Score = 221 (82.9 bits), Expect = 7.7e-42, Sum P(2) = 7.7e-42
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIAV+M +PQL Q +Q L+++++E+C WSL SE+YALQF++ ++ YITE
Sbjct: 6 NVVKIAVQMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLPHSERYALQFAD-GHRRYITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
NR EIKNGS+L L+ + + A+ +L L ++
Sbjct: 65 NRMEIKNGSILCLSTAPDREAERLLRGLQSES 96
Score = 39 (18.8 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 173 LGPFENQRRTFASYGYALDPSS-EVESKVIGASMSGDKNKTV 213
L P+ ++R AL ++ E E + +GA +S D+ +++
Sbjct: 301 LDPYSQEQREQLQ---ALRQAAFEPEGESVGAGLSADRRRSL 339
>MGI|MGI:2153045 [details] [associations]
symbol:Elmo2 "engulfment and cell motility 2" species:10090
"Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006909 "phagocytosis" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0016020 "membrane" evidence=ISO]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISO] [GO:0060326 "cell
chemotaxis" evidence=ISO] InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS50003 PROSITE:PS51335 MGI:MGI:2153045
GO:GO:0005829 GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016020 GO:GO:0005856 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GO:GO:0060326 eggNOG:NOG295208
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
HOVERGEN:HBG051463 CTD:63916 EMBL:AF398884 EMBL:AK004448
EMBL:AK032033 EMBL:AK033918 EMBL:AK035710 EMBL:AK038455
EMBL:AK045428 EMBL:AK047040 EMBL:AK050823 EMBL:AK053574
EMBL:AL591430 EMBL:BC023954 EMBL:AB093301 IPI:IPI00402900
IPI:IPI00468079 IPI:IPI00756692 RefSeq:NP_525026.2
RefSeq:NP_997588.1 RefSeq:NP_997589.1 UniGene:Mm.35064
ProteinModelPortal:Q8BHL5 SMR:Q8BHL5 IntAct:Q8BHL5 STRING:Q8BHL5
PhosphoSite:Q8BHL5 PaxDb:Q8BHL5 PRIDE:Q8BHL5
Ensembl:ENSMUST00000071699 Ensembl:ENSMUST00000074046
Ensembl:ENSMUST00000094329 Ensembl:ENSMUST00000103088
Ensembl:ENSMUST00000103091 GeneID:140579 KEGG:mmu:140579
UCSC:uc008nxj.1 UCSC:uc008nxm.1 InParanoid:A2A5A6 OMA:GEMLAFT
NextBio:369891 Bgee:Q8BHL5 Genevestigator:Q8BHL5
GermOnline:ENSMUSG00000017670 Uniprot:Q8BHL5
Length = 732
Score = 335 (123.0 bits), Expect = 9.4e-42, Sum P(2) = 9.4e-42
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 454 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 513
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 514 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 571
Query: 845 SR 846
+R
Sbjct: 572 NR 573
Score = 323 (118.8 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 398 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 457
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 458 EELFGICIQLLNKTWKEMRATAEDFNK 484
Score = 320 (117.7 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 402 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 461
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 462 GICIQLLNKTWKEMRATAEDFNKVM 486
Score = 193 (73.0 bits), Expect = 9.4e-42, Sum P(2) = 9.4e-42
Identities = 39/102 (38%), Positives = 69/102 (67%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + Y+TE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYVTE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ RN+IKNG++L+LA S S+ A ++ + +++S+E + A
Sbjct: 64 QTRNDIKNGTILQLAVSPSRAARQLMERT--QSSSMETRLDA 103
>UNIPROTKB|Q96BJ8 [details] [associations]
symbol:ELMO3 "Engulfment and cell motility protein 3"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001849
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 SMART:SM00233 GO:GO:0005737 GO:GO:0006915
SUPFAM:SSF48371 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 eggNOG:NOG295208
InterPro:IPR024574 Pfam:PF11841 EMBL:AC040160 HOGENOM:HOG000230985
HOVERGEN:HBG051463 CTD:79767 OMA:NFCYDCS EMBL:AK300976
EMBL:AK023886 EMBL:BC015524 EMBL:BC034410 IPI:IPI00644140
IPI:IPI00793764 IPI:IPI00930637 RefSeq:NP_078988.2
UniGene:Hs.377416 ProteinModelPortal:Q96BJ8 SMR:Q96BJ8
STRING:Q96BJ8 PhosphoSite:Q96BJ8 DMDM:238054390 PaxDb:Q96BJ8
PRIDE:Q96BJ8 DNASU:79767 Ensembl:ENST00000393997
Ensembl:ENST00000477898 GeneID:79767 KEGG:hsa:79767 UCSC:uc002esa.3
UCSC:uc002esc.3 GeneCards:GC16P067233 H-InvDB:HIX0013139
HGNC:HGNC:17289 HPA:HPA021484 MIM:606422 neXtProt:NX_Q96BJ8
PharmGKB:PA27756 InParanoid:Q96BJ8 GenomeRNAi:79767 NextBio:69241
ArrayExpress:Q96BJ8 Bgee:Q96BJ8 CleanEx:HS_ELMO3
Genevestigator:Q96BJ8 GermOnline:ENSG00000102890 Uniprot:Q96BJ8
Length = 720
Score = 310 (114.2 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 75/165 (45%), Positives = 99/165 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLRVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVGIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EGT F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGTLFRKISSRRRQDKLWFCCLSPNHK 571
Score = 266 (98.7 bits), Expect = 7.0e-37, Sum P(2) = 7.0e-37
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R S++L LCE+LR+G+ SE ++ PMFF D F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARGSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVGIQLLNKTWKEMRATQEDFDKVM 468
Score = 261 (96.9 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 52/123 (42%), Positives = 75/123 (60%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R
Sbjct: 344 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARG 403
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 404 SIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQED 463
Query: 1010 FVK 1012
F K
Sbjct: 464 FDK 466
Score = 219 (82.2 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 41/92 (44%), Positives = 64/92 (69%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIA++M +PQL Q +Q L+++++E+C WSL+ SE+YALQF++ ++ YITE
Sbjct: 6 NVVKIAIKMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLTHSERYALQFAD-GHRRYITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
NR EIKNGS+L L+ + A+ +L L +
Sbjct: 65 NRAEIKNGSILCLSTAPDLEAEQLLGGLQSNS 96
Score = 39 (18.8 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 195 EVESKVIGASMSGDKNKTV 213
EVE + GA +S D+ +++
Sbjct: 321 EVEGESSGAGLSADRRRSL 339
>UNIPROTKB|F1RFW8 [details] [associations]
symbol:ELMO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006909 "phagocytosis" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GeneTree:ENSGT00390000014155
InterPro:IPR024574 Pfam:PF11841 CTD:79767 OMA:NFCYDCS EMBL:CU929920
RefSeq:XP_003126980.1 UniGene:Ssc.22165 Ensembl:ENSSSCT00000003084
GeneID:100522492 KEGG:ssc:100522492 Uniprot:F1RFW8
Length = 720
Score = 313 (115.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 75/165 (45%), Positives = 100/165 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLRVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVSIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P+SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPSSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EGT F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGTLFRKISSRRRQDKLWFCCLSPNHK 571
Score = 271 (100.5 bits), Expect = 5.2e-37, Sum P(2) = 5.2e-37
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+LR+G+ SE ++ PMFF D F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVSIQLLNKTWKEMRATQEDFDKVM 468
Score = 266 (98.7 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 52/123 (42%), Positives = 76/123 (61%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R+
Sbjct: 344 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARS 403
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 404 SIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQED 463
Query: 1010 FVK 1012
F K
Sbjct: 464 FDK 466
Score = 215 (80.7 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 41/92 (44%), Positives = 65/92 (70%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIAV+M + +PQL Q +Q L+++++E+C W+L SE+YALQF++ + + YITE
Sbjct: 6 NVVKIAVQMREAIPQLIQLDQAKPLAAVLKEVCEAWNLPHSERYALQFADGHGR-YITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
NR EIKNGS+L L+ + A+ +L L ++
Sbjct: 65 NRMEIKNGSILCLSTAPDLEAERLLGGLQSES 96
>UNIPROTKB|Q5JVZ5 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
EMBL:CH471077 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0006909 InterPro:IPR024574 Pfam:PF11841 HOGENOM:HOG000230985
HOVERGEN:HBG051463 EMBL:AL133227 UniGene:Hs.210469 HGNC:HGNC:17233
EMBL:AL031686 IPI:IPI00640649 SMR:Q5JVZ5 STRING:Q5JVZ5
Ensembl:ENST00000352077 Uniprot:Q5JVZ5
Length = 718
Score = 335 (123.0 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 440 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 499
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 500 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 557
Query: 845 SR 846
+R
Sbjct: 558 NR 559
Score = 323 (118.8 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 384 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 443
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 444 EELFGICIQLLNKTWKEMRATAEDFNK 470
Score = 320 (117.7 bits), Expect = 6.5e-40, Sum P(2) = 6.5e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 388 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 447
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 448 GICIQLLNKTWKEMRATAEDFNKVM 472
Score = 191 (72.3 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
+ R++IKNG++L+LA S S+ A ++ + N
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERTQSSN 96
Score = 41 (19.5 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 19/102 (18%), Positives = 43/102 (42%)
Query: 603 TLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICS 662
TL + P +T + + +++ I+++A+ + QL + Q+ + + + +
Sbjct: 50 TLRYADGPQLYIT---EQTRSDIKNGTILQLAISPSRAARQLMERTQSSNMETRLDAMKE 106
Query: 663 GWSLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLRLAFS 704
LS +A +F + +T + K S LAF+
Sbjct: 107 LAKLSADVTFATEFINMDGIIVLTRLVESGTKLLSHEMLAFT 148
>UNIPROTKB|Q96JJ3 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0060326 "cell
chemotaxis" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR001849
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 SMART:SM00233 GO:GO:0005829 EMBL:CH471077
GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016020 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GO:GO:0060326 eggNOG:NOG295208
InterPro:IPR024574 Pfam:PF11841 OrthoDB:EOG42RD6S
HOVERGEN:HBG051463 CTD:63916 EMBL:AF398886 EMBL:AF417861
EMBL:AB058737 EMBL:AK021718 EMBL:AK022731 EMBL:AK023103
EMBL:AK057032 EMBL:AL133227 IPI:IPI00940537 RefSeq:NP_573403.1
RefSeq:NP_877496.1 UniGene:Hs.210469 ProteinModelPortal:Q96JJ3
SMR:Q96JJ3 IntAct:Q96JJ3 STRING:Q96JJ3 PhosphoSite:Q96JJ3
DMDM:30913107 PaxDb:Q96JJ3 PRIDE:Q96JJ3 DNASU:63916
Ensembl:ENST00000290246 Ensembl:ENST00000396391 GeneID:63916
KEGG:hsa:63916 UCSC:uc002xrs.1 GeneCards:GC20M044994
HGNC:HGNC:17233 HPA:HPA018811 MIM:606421 neXtProt:NX_Q96JJ3
PharmGKB:PA27755 InParanoid:Q96JJ3 PhylomeDB:Q96JJ3
GenomeRNAi:63916 NextBio:65636 ArrayExpress:Q96JJ3 Bgee:Q96JJ3
Genevestigator:Q96JJ3 GermOnline:ENSG00000062598 Uniprot:Q96JJ3
Length = 720
Score = 335 (123.0 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 6.6e-40, Sum P(2) = 6.6e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 191 (72.3 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
+ R++IKNG++L+LA S S+ A ++ + N
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERTQSSN 96
>UNIPROTKB|Q5RCC1 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0060326 "cell chemotaxis"
evidence=ISS] InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727
PROSITE:PS50003 PROSITE:PS51335 GO:GO:0005829 GO:GO:0006915
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016020
GO:GO:0005856 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GO:GO:0060326 InterPro:IPR024574 Pfam:PF11841 HOVERGEN:HBG051463
CTD:63916 EMBL:CR858353 EMBL:CR860500 RefSeq:NP_001126536.1
RefSeq:NP_001128780.1 UniGene:Pab.18735 UniGene:Pab.19811
ProteinModelPortal:Q5RCC1 GeneID:100173525 GeneID:100189680
KEGG:pon:100173525 KEGG:pon:100189680 InParanoid:Q5RCC1
Uniprot:Q5RCC1
Length = 720
Score = 335 (123.0 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 6.6e-40, Sum P(2) = 6.6e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 191 (72.3 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
+ R++IKNG++L+LA S S+ A ++ + N
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERTQSSN 96
>UNIPROTKB|B4DRL5 [details] [associations]
symbol:ELMO2 "cDNA FLJ60834, highly similar to Engulfment
and cell motility protein 2 (CED-12 homolog A)" species:9606 "Homo
sapiens" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
InterPro:IPR024574 Pfam:PF11841 HOGENOM:HOG000230985
HOVERGEN:HBG051463 EMBL:AL133227 UniGene:Hs.210469 HGNC:HGNC:17233
OMA:GEMLAFT EMBL:AL031686 EMBL:AK299318 IPI:IPI00260090 SMR:B4DRL5
STRING:B4DRL5 Ensembl:ENST00000439931 UCSC:uc010zxr.1
Uniprot:B4DRL5
Length = 732
Score = 335 (123.0 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 454 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 513
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 514 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 571
Query: 845 SR 846
+R
Sbjct: 572 NR 573
Score = 323 (118.8 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 398 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 457
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 458 EELFGICIQLLNKTWKEMRATAEDFNK 484
Score = 320 (117.7 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 402 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 461
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 462 GICIQLLNKTWKEMRATAEDFNKVM 486
Score = 191 (72.3 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKN 720
+ R++IKNG++L+LA S S+ A ++ + N
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERTQSSN 96
>UNIPROTKB|A4FUD6 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9913 "Bos taurus" [GO:0016020 "membrane" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0060326 "cell chemotaxis"
evidence=ISS] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS50003 PROSITE:PS51335 SMART:SM00233
GO:GO:0005829 GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016020 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909 GO:GO:0060326
eggNOG:NOG295208 InterPro:IPR024574 Pfam:PF11841
HOGENOM:HOG000230985 OrthoDB:EOG42RD6S HOVERGEN:HBG051463
EMBL:BC114724 IPI:IPI00717995 RefSeq:NP_001076860.1
UniGene:Bt.48490 ProteinModelPortal:A4FUD6 STRING:A4FUD6
GeneID:508361 KEGG:bta:508361 CTD:63916 InParanoid:A4FUD6
NextBio:20868482 Uniprot:A4FUD6
Length = 720
Score = 335 (123.0 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 190 (71.9 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 39/102 (38%), Positives = 69/102 (67%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R++IKNG++L+LA S S+ A ++ + +++S+E + A
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERT--QSSSMETRLDA 103
>UNIPROTKB|F1MUZ4 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9913 "Bos taurus" [GO:0060326 "cell chemotaxis"
evidence=IEA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
GO:GO:0005829 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016020 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 GO:GO:0060326
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
IPI:IPI00717995 UniGene:Bt.48490 OMA:GEMLAFT EMBL:DAAA02036786
Ensembl:ENSBTAT00000004747 Uniprot:F1MUZ4
Length = 720
Score = 335 (123.0 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 190 (71.9 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 39/102 (38%), Positives = 69/102 (67%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R++IKNG++L+LA S S+ A ++ + +++S+E + A
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERT--QSSSMETRLDA 103
>UNIPROTKB|F1NFA5 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0016601
"Rac protein signal transduction" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS51335 GO:GO:0005886 GO:GO:0005737
GO:GO:0006911 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0005856 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036
GO:GO:0006928 GO:GO:0016601 GeneTree:ENSGT00390000014155
InterPro:IPR024574 Pfam:PF11841 OMA:RADEHEC EMBL:AADN02001334
EMBL:AADN02001335 EMBL:AADN02001336 EMBL:AADN02001337
EMBL:AADN02001338 IPI:IPI00591122 Ensembl:ENSGALT00000019753
ArrayExpress:F1NFA5 Uniprot:F1NFA5
Length = 744
Score = 293 (108.2 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 60/125 (48%), Positives = 90/125 (72%)
Query: 723 LEEKTAAEFYCICIVL-LNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRAN 781
+ K+ +E CIC L L +TW +M T+ F +V VV+EQI RAL+++P+SLD+F++
Sbjct: 462 VRNKSFSELCCICFALMLRETWMQMATTSLGFNEVMQVVKEQIMRALTTKPSSLDQFKSK 521
Query: 782 ISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFT 841
+ L+Y+EI + Q ER ++E+++S +PI+ELKE I PEI++LI+QQRL LVEGT F
Sbjct: 522 LQNLSYTEILKIRQSERMNQEDFQS--RPILELKEKIQPEILELIKQQRLNRLVEGTCFR 579
Query: 842 KYSSR 846
K +SR
Sbjct: 580 KLNSR 584
Score = 235 (87.8 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 51/114 (44%), Positives = 78/114 (68%)
Query: 613 VVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQY 672
VV A +++ A A+IVK+A+E P+L + +Q LSSII+E+C GWSL++ +Q+
Sbjct: 3 VVLAPKNSSIAMPPPADIVKVAIEWPGAFPKLMEIDQKKPLSSIIKEVCDGWSLANHDQF 62
Query: 673 ALQFSETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
ALQ ++++N YITEKNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 63 ALQHADSSNF-YITEKNRNEIKNGAILRLTTSPAQNAHQLHERIQSSSMDAKLE 115
Score = 220 (82.5 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHP--MFFTHDHPF 985
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ S ++HP +F+ + F
Sbjct: 408 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELQSITCEHFHPGSLFYVRNKSF 467
Query: 986 EEFYCICIVL-LNKTWKEMRATTEDF 1010
E CIC L L +TW +M T+ F
Sbjct: 468 SELCCICFALMLRETWMQMATTSLGF 493
Score = 219 (82.2 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHP--MFFTHDHPFEE 905
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ S ++HP +F+ + F E
Sbjct: 410 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELQSITCEHFHPGSLFYVRNKSFSE 469
Query: 906 FYCICIVL-LNKTWKEMRATTEDF---VKVVLENSCRA 939
CIC L L +TW +M T+ F ++VV E RA
Sbjct: 470 LCCICFALMLRETWMQMATTSLGFNEVMQVVKEQIMRA 507
>UNIPROTKB|E1C122 [details] [associations]
symbol:ELMO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
EMBL:AADN02019007 EMBL:AADN02019008 IPI:IPI00598923
Ensembl:ENSGALT00000011725 ArrayExpress:E1C122 Uniprot:E1C122
Length = 718
Score = 338 (124.0 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 440 DRAFEELFAICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 499
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 500 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 557
Query: 845 SR 846
+R
Sbjct: 558 NR 559
Score = 323 (118.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL + LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 384 DTYIRIVLENSSREDKHECPFGRSAIELTRMLCEILQVGELPNEGRNDYHPMFFTHDRAF 443
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 444 EELFAICIQLLNKTWKEMRATAEDFNK 470
Score = 320 (117.7 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 56/85 (65%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL + LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 388 RIVLENSSREDKHECPFGRSAIELTRMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 447
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 448 AICIQLLNKTWKEMRATAEDFNKVM 472
Score = 185 (70.2 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 40/102 (39%), Positives = 68/102 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+AVE QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAVEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R +IKNG++L+LA S S+ A ++ ++ ++ S+E + A
Sbjct: 64 QTRCDIKNGTILQLAVSPSRAARQLMERI--QSHSMEVRLDA 103
Score = 37 (18.1 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 20/102 (19%), Positives = 41/102 (40%)
Query: 603 TLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICS 662
TL + P +T + +++ I+++AV + QL + Q+ ++ + +
Sbjct: 50 TLRYADGPQLYIT---EQTRCDIKNGTILQLAVSPSRAARQLMERIQSHSMEVRLDAMKE 106
Query: 663 GWSLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLRLAFS 704
LS +A +F +T + K S LAF+
Sbjct: 107 LAKLSADVTFATEFINMEGITVLTRLVESGTKLLSHEMLAFT 148
>UNIPROTKB|E1BSX1 [details] [associations]
symbol:ELMO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0060326 "cell chemotaxis" evidence=IEA]
InterPro:IPR001849 InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS51335 SMART:SM00233 GO:GO:0005829
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016020
GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0006909 GO:GO:0060326 GeneTree:ENSGT00390000014155
InterPro:IPR024574 Pfam:PF11841 OMA:GEMLAFT EMBL:AADN02019007
EMBL:AADN02019008 IPI:IPI00821766 Ensembl:ENSGALT00000039078
ArrayExpress:E1BSX1 Uniprot:E1BSX1
Length = 725
Score = 338 (124.0 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 447 DRAFEELFAICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 506
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 507 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 564
Query: 845 SR 846
+R
Sbjct: 565 NR 566
Score = 323 (118.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL + LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 391 DTYIRIVLENSSREDKHECPFGRSAIELTRMLCEILQVGELPNEGRNDYHPMFFTHDRAF 450
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 451 EELFAICIQLLNKTWKEMRATAEDFNK 477
Score = 320 (117.7 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 56/85 (65%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL + LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 395 RIVLENSSREDKHECPFGRSAIELTRMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 454
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 455 AICIQLLNKTWKEMRATAEDFNKVM 479
Score = 185 (70.2 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 40/102 (39%), Positives = 68/102 (66%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+AVE QL + +Q L+SII+E+C GWSL + E Y L++++ + YITE
Sbjct: 5 SDIVKVAVEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYAD-GPQLYITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R +IKNG++L+LA S S+ A ++ ++ ++ S+E + A
Sbjct: 64 QTRCDIKNGTILQLAVSPSRAARQLMERI--QSHSMEVRLDA 103
>UNIPROTKB|G3V8H2 [details] [associations]
symbol:Elmo2 "Engulfment and cell motility 2, ced-12
homolog (C. elegans), isoform CRA_c" species:10116 "Rattus
norvegicus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS51335 RGD:1305784 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
InterPro:IPR024574 Pfam:PF11841 EMBL:CH474005 UniGene:Rn.2097
Ensembl:ENSRNOT00000025757 Uniprot:G3V8H2
Length = 720
Score = 335 (123.0 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 442 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 501
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 502 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 559
Query: 845 SR 846
+R
Sbjct: 560 NR 561
Score = 323 (118.8 bits), Expect = 6.3e-40, Sum P(2) = 6.3e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 386 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 445
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 446 EELFGICIQLLNKTWKEMRATAEDFNK 472
Score = 320 (117.7 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 390 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 449
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 450 GICIQLLNKTWKEMRATAEDFNKVM 474
Score = 188 (71.2 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 37/102 (36%), Positives = 69/102 (67%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+S+I+E+C GWSL + E Y L++++ + Y+TE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASVIKEVCDGWSLPNPEYYTLRYAD-GPQLYVTE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R++IKNG++L+LA S S+ A ++ + +++S+E + A
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERT--QSSSMETRLDA 103
>UNIPROTKB|G3V982 [details] [associations]
symbol:Elmo2 "Engulfment and cell motility 2, ced-12
homolog (C. elegans), isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] InterPro:IPR006816 InterPro:IPR016024
Pfam:PF04727 PROSITE:PS51335 RGD:1305784 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
CTD:63916 EMBL:CH474005 UniGene:Rn.2097 RefSeq:NP_001128427.1
Ensembl:ENSRNOT00000049262 GeneID:362271 KEGG:rno:362271
NextBio:679279 Uniprot:G3V982
Length = 732
Score = 335 (123.0 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 454 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 513
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 514 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 571
Query: 845 SR 846
+R
Sbjct: 572 NR 573
Score = 323 (118.8 bits), Expect = 6.8e-40, Sum P(2) = 6.8e-40
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 398 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 457
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 458 EELFGICIQLLNKTWKEMRATAEDFNK 484
Score = 320 (117.7 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 402 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 461
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 462 GICIQLLNKTWKEMRATAEDFNKVM 486
Score = 188 (71.2 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 37/102 (36%), Positives = 69/102 (67%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
++IVK+A+E QL + +Q L+S+I+E+C GWSL + E Y L++++ + Y+TE
Sbjct: 5 SDIVKVAIEWPGANAQLLEIDQKRPLASVIKEVCDGWSLPNPEYYTLRYAD-GPQLYVTE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKTAA 729
+ R++IKNG++L+LA S S+ A ++ + +++S+E + A
Sbjct: 64 QTRSDIKNGTILQLAISPSRAARQLMERT--QSSSMETRLDA 103
>ZFIN|ZDB-GENE-050309-39 [details] [associations]
symbol:im:7143453 "im:7143453" species:7955 "Danio
rerio" [GO:0006909 "phagocytosis" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS50003 PROSITE:PS51335
SMART:SM00233 ZFIN:ZDB-GENE-050309-39 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
EMBL:CABZ01044834 EMBL:CABZ01065721 EMBL:CABZ01065722 EMBL:CU694366
EMBL:CU855816 IPI:IPI00505815 Ensembl:ENSDART00000061738
ArrayExpress:F1QSV8 Bgee:F1QSV8 Uniprot:F1QSV8
Length = 715
Score = 336 (123.3 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 76/149 (51%), Positives = 97/149 (65%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+T D ++ LEE +CICI LLNKTWKEMRAT EDF KV
Sbjct: 412 ILRIGEPPSETGSDYHPIFFAQDRLLEE-----LFCICIQLLNKTWKEMRATQEDFDKVM 466
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQITR L+S+P SL+ F+ ++ L YSEI L Q ER +EE + A P++ELKE
Sbjct: 467 QVVREQITRTLASKPTSLELFKNKVNALNYSEILKLRQTERLHQEE--TLAPPVLELKER 524
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
+ PE+++LI+QQRL L GT F K SSR
Sbjct: 525 LKPELLELIRQQRLNRLCHGTLFRKMSSR 553
Score = 306 (112.8 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 56/83 (67%), Positives = 65/83 (78%)
Query: 850 VLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCI 909
VLENS R D+HECPF R+S++L LCEILRIG+ PSE G +YHP+FF D EE +CI
Sbjct: 384 VLENSSREDKHECPFARSSIQLTLILCEILRIGEPPSETGSDYHPIFFAQDRLLEELFCI 443
Query: 910 CIVLLNKTWKEMRATTEDFVKVV 932
CI LLNKTWKEMRAT EDF KV+
Sbjct: 444 CIQLLNKTWKEMRATQEDFDKVM 466
Score = 303 (111.7 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 55/85 (64%), Positives = 65/85 (76%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
+ + VLENS R D+HECPF R+S++L LCEILRIG+ PSE G +YHP+FF D EE
Sbjct: 380 YSRFVLENSSREDKHECPFARSSIQLTLILCEILRIGEPPSETGSDYHPIFFAQDRLLEE 439
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
+CICI LLNKTWKEMRAT EDF K
Sbjct: 440 LFCICIQLLNKTWKEMRATQEDFDK 464
Score = 206 (77.6 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 626 QDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYI 685
Q +IVKIA++M PQL Q +Q L+S+I+E+C W+L E YALQ+++ + YI
Sbjct: 3 QQKDIVKIAIQMPGAYPQLIQLDQKKPLTSVIKEVCDKWNLPGPENYALQYAD-GIQTYI 61
Query: 686 TEKNRNEIKNGSVLRLAFSASKTADDILSKL--SDKN 720
TE NR +IKNGS+LRL + + A+D+ + SD N
Sbjct: 62 TESNRLDIKNGSILRLTKAPGRCAEDLYKGIQSSDSN 98
Score = 42 (19.8 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 2 LELQDYGGSSSESDAESQTLHLKPIESCAFSVAKSLSVC---ATPAVIPK-VMESSNL-T 56
+EL D+G S E+ ++ +K + S F AK L + A++ V+ SS+L T
Sbjct: 151 MELMDHGIVSWEN---LSSVFIKKMAS--FVNAKVLDTSIQQVSLAILESMVLSSSSLFT 205
Query: 57 DVNTKEIT-----KNLRY--EELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSFQF 109
+V +EIT +L+ ++L + L AD+ L F+E+ ++ +
Sbjct: 206 EVK-QEITLERLLSHLQVTNQQLQTKAMALLMALLQAGGEADRQELFEFLEKRNLRQYIH 264
Query: 110 ENQRRTFASYG 120
+N + +S G
Sbjct: 265 KNIIHSSSSVG 275
>RGD|1304734 [details] [associations]
symbol:Elmo3 "engulfment and cell motility 3" species:10116
"Rattus norvegicus" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] InterPro:IPR001849
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS50003 PROSITE:PS51335
SMART:SM00233 RGD:1304734 GO:GO:0005737 GO:GO:0006915 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
EMBL:CH473972 eggNOG:NOG295208 InterPro:IPR024574 Pfam:PF11841
HOGENOM:HOG000230985 CTD:79767 OMA:NFCYDCS OrthoDB:EOG4N5VWM
EMBL:BC099761 IPI:IPI00363524 RefSeq:NP_001025199.1
UniGene:Rn.151249 ProteinModelPortal:Q499U2 PRIDE:Q499U2
GeneID:291962 KEGG:rno:291962 UCSC:RGD:1304734 InParanoid:Q499U2
NextBio:633495 Genevestigator:Q499U2 Uniprot:Q499U2
Length = 720
Score = 302 (111.4 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 73/165 (44%), Positives = 97/165 (58%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L + S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLHVGEPCSETAQDFSPMFFSQDHSFHE-----LFCVAIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EG F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGMLFRKISSRRRQDKLWFCCLSPNHK 571
Score = 278 (102.9 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+L +G+ SE ++ PMFF+ DH F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLHVGEPCSETAQDFSPMFFSQDHSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVAIQLLNKTWKEMRATQEDFDKVM 468
Score = 272 (100.8 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
+ + VLENS R D+HECPF R+S++L LCE+L +G+ SE ++ PMFF+ DH F E
Sbjct: 382 YSRFVLENSSREDKHECPFARSSIQLTVLLCELLHVGEPCSETAQDFSPMFFSQDHSFHE 441
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
+C+ I LLNKTWKEMRAT EDF K
Sbjct: 442 LFCVAIQLLNKTWKEMRATQEDFDK 466
Score = 229 (85.7 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 47/96 (48%), Positives = 68/96 (70%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIAV+M +PQL Q +Q L+++++E+C WSL+ E YALQF++ + K YITE
Sbjct: 6 NVVKIAVQMSDAIPQLIQLDQAKPLATVLKEVCDTWSLTHPEHYALQFADGHRK-YITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLE 724
NR+EIKNGS+L L+ + A +LS+L +NAS E
Sbjct: 65 NRSEIKNGSILCLSTAPDLKAQQLLSRL--QNASRE 98
>UNIPROTKB|Q499U2 [details] [associations]
symbol:Elmo3 "Engulfment and cell motility protein 3"
species:10116 "Rattus norvegicus" [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR001849 InterPro:IPR006816 Pfam:PF04727 PROSITE:PS50003
PROSITE:PS51335 SMART:SM00233 RGD:1304734 GO:GO:0005737
GO:GO:0006915 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 EMBL:CH473972 eggNOG:NOG295208
InterPro:IPR024574 Pfam:PF11841 HOGENOM:HOG000230985 CTD:79767
OMA:NFCYDCS OrthoDB:EOG4N5VWM EMBL:BC099761 IPI:IPI00363524
RefSeq:NP_001025199.1 UniGene:Rn.151249 ProteinModelPortal:Q499U2
PRIDE:Q499U2 GeneID:291962 KEGG:rno:291962 UCSC:RGD:1304734
InParanoid:Q499U2 NextBio:633495 Genevestigator:Q499U2
Uniprot:Q499U2
Length = 720
Score = 302 (111.4 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 73/165 (44%), Positives = 97/165 (58%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+L + S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLHVGEPCSETAQDFSPMFFSQDHSFHE-----LFCVAIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EG F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGMLFRKISSRRRQDKLWFCCLSPNHK 571
Score = 278 (102.9 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+L +G+ SE ++ PMFF+ DH F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLHVGEPCSETAQDFSPMFFSQDHSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVAIQLLNKTWKEMRATQEDFDKVM 468
Score = 272 (100.8 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEE 987
+ + VLENS R D+HECPF R+S++L LCE+L +G+ SE ++ PMFF+ DH F E
Sbjct: 382 YSRFVLENSSREDKHECPFARSSIQLTVLLCELLHVGEPCSETAQDFSPMFFSQDHSFHE 441
Query: 988 FYCICIVLLNKTWKEMRATTEDFVK 1012
+C+ I LLNKTWKEMRAT EDF K
Sbjct: 442 LFCVAIQLLNKTWKEMRATQEDFDK 466
Score = 229 (85.7 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 47/96 (48%), Positives = 68/96 (70%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIAV+M +PQL Q +Q L+++++E+C WSL+ E YALQF++ + K YITE
Sbjct: 6 NVVKIAVQMSDAIPQLIQLDQAKPLATVLKEVCDTWSLTHPEHYALQFADGHRK-YITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLE 724
NR+EIKNGS+L L+ + A +LS+L +NAS E
Sbjct: 65 NRSEIKNGSILCLSTAPDLKAQQLLSRL--QNASRE 98
>MGI|MGI:2679007 [details] [associations]
symbol:Elmo3 "engulfment and cell motility 3" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0017124 "SH3 domain binding" evidence=IEA] InterPro:IPR001849
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS50003 PROSITE:PS51335
SMART:SM00233 MGI:MGI:2679007 GO:GO:0005737 GO:GO:0006915
GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0006909 EMBL:CH466525 eggNOG:NOG295208
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
HOGENOM:HOG000230985 HOVERGEN:HBG051463 CTD:79767 OMA:NFCYDCS
OrthoDB:EOG4N5VWM EMBL:AK037067 EMBL:BC058752 EMBL:BC138887
IPI:IPI00420790 IPI:IPI00874459 RefSeq:NP_766348.3
UniGene:Mm.237966 ProteinModelPortal:Q8BYZ7 SMR:Q8BYZ7
IntAct:Q8BYZ7 STRING:Q8BYZ7 PhosphoSite:Q8BYZ7 PaxDb:Q8BYZ7
PRIDE:Q8BYZ7 Ensembl:ENSMUST00000109375 GeneID:234683
KEGG:mmu:234683 UCSC:uc009ncn.2 InParanoid:Q6PDE4 NextBio:382277
Bgee:Q8BYZ7 Genevestigator:Q8BYZ7 GermOnline:ENSMUSG00000014791
Uniprot:Q8BYZ7
Length = 720
Score = 307 (113.1 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 74/165 (44%), Positives = 98/165 (59%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 414 LLRVGEPCSETAQDFSPMFFSQDHSFHE-----LFCVAIQLLNKTWKEMRATQEDFDKVM 468
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 469 QVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 526
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EG F K SSR Q L C + H+
Sbjct: 527 LKPELMGLIRQQRLLRLCEGMLFRKISSRRRQDKLWFCCLSPNHK 571
Score = 284 (105.0 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 51/89 (57%), Positives = 66/89 (74%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+LR+G+ SE ++ PMFF+ DH F
Sbjct: 380 SAYSRFVLENSSREDKHECPFARSSIQLTALLCELLRVGEPCSETAQDFSPMFFSQDHSF 439
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 440 HELFCVAIQLLNKTWKEMRATQEDFDKVM 468
Score = 279 (103.3 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 53/123 (43%), Positives = 78/123 (63%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R+
Sbjct: 344 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARS 403
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF+ DH F E +C+ I LLNKTWKEMRAT ED
Sbjct: 404 SIQLTALLCELLRVGEPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQED 463
Query: 1010 FVK 1012
F K
Sbjct: 464 FDK 466
Score = 219 (82.2 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIAV+M +PQL Q +Q L+++++E+C WSL+ E YALQF++ + K YITE
Sbjct: 6 NVVKIAVQMSDAIPQLIQLDQAKPLATVLKEVCDAWSLTHPEHYALQFADGHRK-YITEN 64
Query: 689 NRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLE 724
NR EIKNGS+L L+ + A +L +L +N S E
Sbjct: 65 NRLEIKNGSILCLSTAPDLKAQQLLGRL--QNTSRE 98
>UNIPROTKB|E2REZ5 [details] [associations]
symbol:ELMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
EMBL:AAEX03004128 Ensembl:ENSCAFT00000032447 Uniprot:E2REZ5
Length = 656
Score = 273 (101.2 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+LR+G+ SE ++ PMFF D F
Sbjct: 515 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSF 574
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 575 HELFCVSIQLLNKTWKEMRATQEDFDKVI 603
Score = 266 (98.7 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 52/123 (42%), Positives = 76/123 (61%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R+
Sbjct: 479 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARS 538
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 539 SIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQED 598
Query: 1010 FVK 1012
F K
Sbjct: 599 FDK 601
Score = 224 (83.9 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 46/112 (41%), Positives = 71/112 (63%)
Query: 616 AGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQ 675
+GW A + N+VKIAV+ +PQL + +Q L+++++E+C WSLS SE+YALQ
Sbjct: 132 SGWTMAPPR----NVVKIAVQKPDAIPQLIRLDQAKPLAAVVKEVCDAWSLSHSERYALQ 187
Query: 676 FSETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKT 727
F++ ++ YITE NR EIKNGS+L L+ + A+ +LS L + +T
Sbjct: 188 FAD-GHRRYITENNRTEIKNGSILCLSTAPDLEAERLLSGLQSGSRERRRET 238
Score = 215 (80.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 47/105 (44%), Positives = 63/105 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 549 LLRVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVSIQLLNKTWKEMRATQEDFDKVI 603
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSRE 802
VVREQ+ R L+ +P+SL+ FR ++ L Y E+ L Q ER +E
Sbjct: 604 QVVREQLARTLALKPSSLELFRTKVNALPYGEVLRLRQTERLHQE 648
Score = 37 (18.1 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 195 EVESKVIGASMSGDKNKTV 213
E E + +GA +S D+ +++
Sbjct: 456 ESEGESLGAGLSADRRRSL 474
>UNIPROTKB|E1BXG8 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
EMBL:AADN02001334 EMBL:AADN02001335 EMBL:AADN02001336
EMBL:AADN02001337 EMBL:AADN02001338 IPI:IPI00570775
Ensembl:ENSGALT00000019756 ArrayExpress:E1BXG8 Uniprot:E1BXG8
Length = 728
Score = 270 (100.1 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 730 EFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISRLTYSE 789
E C + NK W ++ TED V V VV+EQI RAL+++P+SLD+F++ + L+Y+E
Sbjct: 456 ELILSCAMDHNKIWFNLKRNTED-VNVMQVVKEQIMRALTTKPSSLDQFKSKLQNLSYTE 514
Query: 790 ITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I + Q ER ++E+++S +PI+ELKE I PEI++LI+QQRL LVEGT F K +SR
Sbjct: 515 ILKIRQSERMNQEDFQS--RPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNSR 569
Score = 228 (85.3 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 47/99 (47%), Positives = 71/99 (71%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LSSII+E+C GWSL++ +Q+ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAFPKLMEIDQKKPLSSIIKEVCDGWSLANHDQFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGAILRLTTSPAQNAHQLHERIQSSSMDAKLE 102
Score = 196 (74.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFT-HDHPF- 985
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+ + +++ P+F HD F
Sbjct: 395 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELRKKLLLDFLPLFILRHDDGFC 454
Query: 986 EEFYCICIVLLNKTWKEMRATTED 1009
E C + NK W ++ TED
Sbjct: 455 NELILSCAMDHNKIWFNLKRNTED 478
Score = 196 (74.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 42/96 (43%), Positives = 60/96 (62%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFT-HDHPF-EE 905
++VLENS R D+HECPFGR+S+EL K LCEIL++G+ + +++ P+F HD F E
Sbjct: 397 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELRKKLLLDFLPLFILRHDDGFCNE 456
Query: 906 FYCICIVLLNKTWKEMRATTEDF--VKVVLENSCRA 939
C + NK W ++ TED ++VV E RA
Sbjct: 457 LILSCAMDHNKIWFNLKRNTEDVNVMQVVKEQIMRA 492
>UNIPROTKB|F1P6Y1 [details] [associations]
symbol:ELMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
OMA:NFCYDCS EMBL:AAEX03004128 Ensembl:ENSCAFT00000032449
Uniprot:F1P6Y1
Length = 732
Score = 307 (113.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 74/165 (44%), Positives = 99/165 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 426 LLRVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVSIQLLNKTWKEMRATQEDFDKVI 480
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P+SL+ FR ++ L Y E+ L Q ER +E + A PI+EL+E
Sbjct: 481 QVVREQLARTLALKPSSLELFRTKVNALPYGEVLRLRQTERLHQEG--TLAPPILELREK 538
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EGT F K SSR Q L C + H+
Sbjct: 539 LKPELMGLIRQQRLLRLCEGTLFRKISSRRRQDKLWFCCLSPNHK 583
Score = 273 (101.2 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R+S++L LCE+LR+G+ SE ++ PMFF D F
Sbjct: 392 SAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSF 451
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 452 HELFCVSIQLLNKTWKEMRATQEDFDKVI 480
Score = 266 (98.7 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 52/123 (42%), Positives = 76/123 (61%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R+
Sbjct: 356 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARS 415
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 416 SIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQED 475
Query: 1010 FVK 1012
F K
Sbjct: 476 FDK 478
Score = 224 (83.9 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 46/112 (41%), Positives = 71/112 (63%)
Query: 616 AGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQ 675
+GW A + N+VKIAV+ +PQL + +Q L+++++E+C WSLS SE+YALQ
Sbjct: 9 SGWTMAPPR----NVVKIAVQKPDAIPQLIRLDQAKPLAAVVKEVCDAWSLSHSERYALQ 64
Query: 676 FSETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASLEEKT 727
F++ ++ YITE NR EIKNGS+L L+ + A+ +LS L + +T
Sbjct: 65 FAD-GHRRYITENNRTEIKNGSILCLSTAPDLEAERLLSGLQSGSRERRRET 115
Score = 37 (18.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 195 EVESKVIGASMSGDKNKTV 213
E E + +GA +S D+ +++
Sbjct: 333 ESEGESLGAGLSADRRRSL 351
>UNIPROTKB|F8W9E7 [details] [associations]
symbol:ELMO3 "Engulfment and cell motility protein 3"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006909 InterPro:IPR024574 Pfam:PF11841
EMBL:AC040160 IPI:IPI00644140 HGNC:HGNC:17289
ProteinModelPortal:F8W9E7 SMR:F8W9E7 PRIDE:F8W9E7
Ensembl:ENST00000360833 UCSC:uc002esb.3 ArrayExpress:F8W9E7
Bgee:F8W9E7 Uniprot:F8W9E7
Length = 756
Score = 310 (114.2 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 75/165 (45%), Positives = 99/165 (60%)
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVF 757
+LR+ S+TA D ++ S E +C+ I LLNKTWKEMRAT EDF KV
Sbjct: 450 LLRVGEPCSETAQDFSPMFFGQDQSFHE-----LFCVGIQLLNKTWKEMRATQEDFDKVM 504
Query: 758 SVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKEL 817
VVREQ+ R L+ +P SL+ FR ++ LTY E+ L Q ER +E + A PI+EL+E
Sbjct: 505 QVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELREK 562
Query: 818 ITPEIVDLIQQQRLGYLVEGTRFTKYSSRG-QVVLENSCRADEHE 861
+ PE++ LI+QQRL L EGT F K SSR Q L C + H+
Sbjct: 563 LKPELMGLIRQQRLLRLCEGTLFRKISSRRRQDKLWFCCLSPNHK 607
Score = 266 (98.7 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 844 SSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 903
S+ + VLENS R D+HECPF R S++L LCE+LR+G+ SE ++ PMFF D F
Sbjct: 416 SAYSRFVLENSSREDKHECPFARGSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSF 475
Query: 904 EEFYCICIVLLNKTWKEMRATTEDFVKVV 932
E +C+ I LLNKTWKEMRAT EDF KV+
Sbjct: 476 HELFCVGIQLLNKTWKEMRATQEDFDKVM 504
Score = 261 (96.9 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 52/123 (42%), Positives = 75/123 (60%)
Query: 892 YHPMFFTHDHPFEEFYCIC--IVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRT 949
+ + F++ +P ++ + ++ L+ R + + VLENS R D+HECPF R
Sbjct: 380 FRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARG 439
Query: 950 SVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTED 1009
S++L LCE+LR+G+ SE ++ PMFF D F E +C+ I LLNKTWKEMRAT ED
Sbjct: 440 SIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQED 499
Query: 1010 FVK 1012
F K
Sbjct: 500 FDK 502
Score = 162 (62.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 629 NIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEK 688
N+VKIA++M +PQL Q +Q L+++++E+C WSL+ SE+YALQF++ ++ YITE
Sbjct: 59 NVVKIAIKMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLTHSERYALQFAD-GHRRYITEN 117
Query: 689 N 689
+
Sbjct: 118 D 118
Score = 39 (18.8 bits), Expect = 8.7e-23, Sum P(2) = 8.7e-23
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 195 EVESKVIGASMSGDKNKTV 213
EVE + GA +S D+ +++
Sbjct: 357 EVEGESSGAGLSADRRRSL 375
>UNIPROTKB|F1NI18 [details] [associations]
symbol:F1NI18 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GeneTree:ENSGT00390000014155 InterPro:IPR024574 Pfam:PF11841
OMA:NFCYDCS EMBL:AADN02051661 EMBL:AADN02051662 EMBL:AADN02051663
IPI:IPI00603363 Ensembl:ENSGALT00000002702 Uniprot:F1NI18
Length = 678
Score = 325 (119.5 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 68/117 (58%), Positives = 85/117 (72%)
Query: 730 EFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISRLTYSE 789
E +CICI L+NKTWKEMRAT EDF KV VVREQITR LS +P SL+ F+ ++ L YSE
Sbjct: 401 ELFCICIQLVNKTWKEMRATQEDFDKVLQVVREQITRTLSLKPTSLELFKTRVNALNYSE 460
Query: 790 ITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
I L Q ER +EE + A P++EL+E + PE+++LI+QQRL L EGT F K SSR
Sbjct: 461 ILKLRQTERLHQEE--TLAVPVLELRERLKPELLELIRQQRLLRLCEGTLFRKISSR 515
Score = 288 (106.4 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 57/102 (55%), Positives = 72/102 (70%)
Query: 831 LGYLVEGTRFTKYSSRGQVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGV 890
L +V +R T S+ + VLENS R D+HECPF R+S++L LCEIL +G+ SE
Sbjct: 328 LDNMVYFSRHTP-SAYSRFVLENSSREDKHECPFARSSIQLTLILCEILHVGEPCSETAQ 386
Query: 891 NYHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKVV 932
++PMFF DH FEE +CICI L+NKTWKEMRAT EDF KV+
Sbjct: 387 AFYPMFFGQDHFFEELFCICIQLVNKTWKEMRATQEDFDKVL 428
Score = 285 (105.4 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 53/91 (58%), Positives = 65/91 (71%)
Query: 922 RATTEDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTH 981
R T + + VLENS R D+HECPF R+S++L LCEIL +G+ SE ++PMFF
Sbjct: 336 RHTPSAYSRFVLENSSREDKHECPFARSSIQLTLILCEILHVGEPCSETAQAFYPMFFGQ 395
Query: 982 DHPFEEFYCICIVLLNKTWKEMRATTEDFVK 1012
DH FEE +CICI L+NKTWKEMRAT EDF K
Sbjct: 396 DHFFEELFCICIQLVNKTWKEMRATQEDFDK 426
Score = 140 (54.3 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 664 WSLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDILSKLSDKNASL 723
WSL ++E+YALQ+++ + YITE NR EIKNGS+LRL S + A+ + S + N +
Sbjct: 1 WSLPNAERYALQYAD-GRQTYITESNRGEIKNGSILRLTTSPDQEAERLYSGIQSNNVDV 59
Query: 724 E 724
+
Sbjct: 60 K 60
Score = 42 (19.8 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 13/71 (18%), Positives = 32/71 (45%)
Query: 624 KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKN 683
++++ +I+++ +++ +LY Q+ + + SLS +A +F N
Sbjct: 28 EIKNGSILRLTTSPDQEAERLYSGIQSNNVDVKTDSLKKLASLSQDVTFAQEFINRNGLK 87
Query: 684 ---YITEKNRN 691
YI E+ +
Sbjct: 88 QIFYIVEEGND 98
>UNIPROTKB|B4DZ20 [details] [associations]
symbol:ELMO2 "cDNA FLJ56422, highly similar to Engulfment
and cell motility protein 2" species:9606 "Homo sapiens"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] InterPro:IPR001849 InterPro:IPR006816 Pfam:PF04727
PROSITE:PS51335 SMART:SM00233 GO:GO:0005856 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
HOVERGEN:HBG051463 EMBL:AL133227 UniGene:Hs.210469 HGNC:HGNC:17233
EMBL:AL031686 EMBL:AK302710 IPI:IPI01009921 SMR:B4DZ20
STRING:B4DZ20 Ensembl:ENST00000454865 UCSC:uc002xrv.1
Uniprot:B4DZ20
Length = 452
Score = 335 (123.0 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 174 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 233
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 234 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 291
Query: 845 SR 846
+R
Sbjct: 292 NR 293
Score = 323 (118.8 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 118 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 177
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 178 EELFGICIQLLNKTWKEMRATAEDFNK 204
Score = 320 (117.7 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 122 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 181
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 182 GICIQLLNKTWKEMRATAEDFNKVM 206
>UNIPROTKB|H0YCM7 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335 GO:GO:0005856
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909 EMBL:AL133227
HGNC:HGNC:17233 EMBL:AL031686 Ensembl:ENST00000467800
Uniprot:H0YCM7
Length = 441
Score = 335 (123.0 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 167 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 226
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 227 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 284
Query: 845 SR 846
+R
Sbjct: 285 NR 286
Score = 323 (118.8 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 111 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 170
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 171 EELFGICIQLLNKTWKEMRATAEDFNK 197
Score = 320 (117.7 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 115 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 174
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 175 GICIQLLNKTWKEMRATAEDFNKVM 199
>UNIPROTKB|Q5JW01 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335 GO:GO:0005856
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
HOGENOM:HOG000230985 HOVERGEN:HBG051463 EMBL:AL133227
UniGene:Hs.210469 HGNC:HGNC:17233 EMBL:AL031686 IPI:IPI00643255
SMR:Q5JW01 STRING:Q5JW01 Ensembl:ENST00000452857 Uniprot:Q5JW01
Length = 283
Score = 335 (123.0 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 9 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 68
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 69 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 126
Query: 845 SR 846
+R
Sbjct: 127 NR 128
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/41 (78%), Positives = 34/41 (82%)
Query: 892 YHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKVV 932
YHPMFFTHD FEE + ICI LLNKTWKEMRAT EDF KV+
Sbjct: 1 YHPMFFTHDRAFEELFGICIQLLNKTWKEMRATAEDFNKVM 41
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 31/39 (79%), Positives = 32/39 (82%)
Query: 974 YHPMFFTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVK 1012
YHPMFFTHD FEE + ICI LLNKTWKEMRAT EDF K
Sbjct: 1 YHPMFFTHDRAFEELFGICIQLLNKTWKEMRATAEDFNK 39
>UNIPROTKB|Q5JVZ8 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335 GO:GO:0005856
GO:GO:0006909 InterPro:IPR024574 Pfam:PF11841 HOVERGEN:HBG051463
EMBL:AL133227 UniGene:Hs.210469 HGNC:HGNC:17233 EMBL:AL031686
IPI:IPI00640870 STRING:Q5JVZ8 Ensembl:ENST00000425546
Uniprot:Q5JVZ8
Length = 267
Score = 325 (119.5 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 58/94 (61%), Positives = 73/94 (77%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 174 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 233
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVKCKSSPAL 1019
EE + ICI LLNKTWKEMRAT EDF K S L
Sbjct: 234 EELFGICIQLLNKTWKEMRATAEDFNKVSVSGLL 267
Score = 319 (117.4 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 57/84 (67%), Positives = 69/84 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 178 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 237
Query: 908 CICIVLLNKTWKEMRATTEDFVKV 931
ICI LLNKTWKEMRAT EDF KV
Sbjct: 238 GICIQLLNKTWKEMRATAEDFNKV 261
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 329 (120.9 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 101/343 (29%), Positives = 156/343 (45%)
Query: 300 SFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCR 359
S H P G++L+++ P R + T GHTK ++AI W HLL S +D
Sbjct: 134 SVRHRPK--GSSLQTEMP-SRMSISLT------GHTKAVTAIDWSTSHVHLLASAGLDGA 184
Query: 360 VKLWEVYK-ERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVK 418
V +W V+ +++ VR + H V+D+ +W K LLSC DC +
Sbjct: 185 VYVWNVWSNDKKKVRAFLHHNAPVKDV-------------KW-SKQGLSLLSCGYDCTSR 230
Query: 419 LWEVYKEHRCVRTY-YGHRQAVRDICFNNTGTN-FISAGYDRYLKLWDTESGECISRFTS 476
L++V R V T + + V + F+ N F+S G L+LWD + + + +
Sbjct: 231 LFDV---ERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVR 287
Query: 477 --------RKVAYCVKFHPDEDKQHLDIPVDMKYIAD-----PTMHSM-------PAVTS 516
+A +F D +I + + D P + + P +
Sbjct: 288 DLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKR 347
Query: 517 SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDAD 576
P + QS N IFS FKLN+ K FEGH VAG+ +FSPD L SG +D
Sbjct: 348 HPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSD 407
Query: 577 GKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
G Y++D+K+T L KK KA++ C++ +HP P+ V W+
Sbjct: 408 GSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVAACSWN 450
>UNIPROTKB|F5GZP8 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
Pfam:PF04727 PROSITE:PS51335 SMART:SM00233 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
InterPro:IPR024574 Pfam:PF11841 EMBL:AL133227 HGNC:HGNC:17233
EMBL:AL031686 IPI:IPI00642462 ProteinModelPortal:F5GZP8 SMR:F5GZP8
Ensembl:ENST00000445496 ArrayExpress:F5GZP8 Bgee:F5GZP8
Uniprot:F5GZP8
Length = 537
Score = 335 (123.0 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 259 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 318
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 319 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 376
Query: 845 SR 846
+R
Sbjct: 377 NR 378
Score = 323 (118.8 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 203 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 262
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 263 EELFGICIQLLNKTWKEMRATAEDFNK 289
Score = 320 (117.7 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 207 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 266
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 267 GICIQLLNKTWKEMRATAEDFNKVM 291
>UNIPROTKB|I3LTY7 [details] [associations]
symbol:ELMO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060326 "cell chemotaxis" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006909 "phagocytosis" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335
SMART:SM00233 GO:GO:0005829 GO:GO:0016020 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
GO:GO:0060326 GeneTree:ENSGT00390000014155 InterPro:IPR024574
Pfam:PF11841 OMA:GEMLAFT EMBL:FP340392 Ensembl:ENSSSCT00000023621
Uniprot:I3LTY7
Length = 582
Score = 335 (123.0 bits), Expect = 4.8e-27, P = 4.8e-27
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 304 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 363
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 364 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 421
Query: 845 SR 846
+R
Sbjct: 422 NR 423
Score = 323 (118.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 248 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 307
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 308 EELFGICIQLLNKTWKEMRATAEDFNK 334
Score = 320 (117.7 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 252 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 311
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 312 GICIQLLNKTWKEMRATAEDFNKVM 336
>UNIPROTKB|Q7Z5G9 [details] [associations]
symbol:ELMO2 "Engulfment and cell motility protein 2"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909
"phagocytosis" evidence=IEA] InterPro:IPR001849 InterPro:IPR006816
InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335 SMART:SM00233
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006909
InterPro:IPR024574 Pfam:PF11841 HOGENOM:HOG000230985
HOVERGEN:HBG051463 CTD:63916 EMBL:AL133227 RefSeq:NP_877496.1
UniGene:Hs.210469 DNASU:63916 GeneID:63916 KEGG:hsa:63916
HGNC:HGNC:17233 PharmGKB:PA27755 GenomeRNAi:63916 NextBio:65636
EMBL:AL031686 IPI:IPI00642462 EMBL:BC000143 SMR:Q7Z5G9
STRING:Q7Z5G9 Ensembl:ENST00000372176 Uniprot:Q7Z5G9
Length = 632
Score = 335 (123.0 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 725 EKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISR 784
++ E + ICI LLNKTWKEMRAT EDF KV VVREQITRAL S+P SLD+F++ +
Sbjct: 354 DRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRS 413
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
L+YSEI L Q ER S+++++S PIVEL+E I PEI++LI+QQRL L EG+ F K
Sbjct: 414 LSYSEILRLRQSERMSQDDFQS--PPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIG 471
Query: 845 SR 846
+R
Sbjct: 472 NR 473
Score = 323 (118.8 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 56/87 (64%), Positives = 71/87 (81%)
Query: 926 EDFVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPF 985
+ ++++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD F
Sbjct: 298 DTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAF 357
Query: 986 EEFYCICIVLLNKTWKEMRATTEDFVK 1012
EE + ICI LLNKTWKEMRAT EDF K
Sbjct: 358 EELFGICIQLLNKTWKEMRATAEDFNK 384
Score = 320 (117.7 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGDAPSEQGVNYHPMFFTHDHPFEEFY 907
++VLENS R D+HECPFGR+++EL K LCEIL++G+ P+E +YHPMFFTHD FEE +
Sbjct: 302 RIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELF 361
Query: 908 CICIVLLNKTWKEMRATTEDFVKVV 932
ICI LLNKTWKEMRAT EDF KV+
Sbjct: 362 GICIQLLNKTWKEMRATAEDFNKVM 386
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 14 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 71
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 72 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 116
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 233
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 234 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 287
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 77/294 (26%), Positives = 138/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 252 (93.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 76/294 (25%), Positives = 137/294 (46%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GHTK +S++++ P + L S S D +K+W Y + + +T GH+ + D+ +++
Sbjct: 40 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS 97
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
++LL+S S D +K+W+V +C++T GH V FN
Sbjct: 98 --------------DSNLLVSASDDKTLKIWDV-SSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D--- 499
+S +D +++WD ++G+C+ + V F+ D D + D
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++DN + ++ ++ K KT+ H
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKC--LKTYTCHKNEK 259
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
Y +FS +++SG D YIW+ +T ++ +K + H V IST HP E
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE 313
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 251 (93.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 77/303 (25%), Positives = 138/303 (45%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
+T +GH K IS++++ P L S S D +K+W Y + + RT GH++ + DI
Sbjct: 40 YTLKGHLKSISSVKFSP-DGKWLASASADKTIKIWGAY-DGKFERTLEGHKEGISDIA-- 95
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
W + + L+ S S D +K+W+V + + V+T GH++ V + FN
Sbjct: 96 -----------W-SQDSKLICSASDDKTIKIWDV-ESGKMVKTLKGHKEYVFGVSFNPQS 142
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRKVAYC-VKFHPDED---KQHLDIPV---D-- 499
+S +D +++WD +GEC ++ V F+ D D V D
Sbjct: 143 NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTT 202
Query: 500 ----MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVA 555
+ I+ + V SPN K++ ++DN + ++S N K KT+ GH
Sbjct: 203 TGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC--LKTYTGHKNE 260
Query: 556 GYACSLDFSPDMS-YLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
Y FS ++++G D YI++ +T ++ + H+ V ++ HP E ++
Sbjct: 261 KYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTE--NII 318
Query: 615 TAG 617
+G
Sbjct: 319 ASG 321
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 500 MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYAC 559
+KY + S+ +V SP+ KWLA S D I I+ A + K R T EGH G +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDG-KFER--TLEGHK-EGIS- 92
Query: 560 SLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
+ +S D + S D IWD ++ K+ K K H ++P + + +V+ +D
Sbjct: 93 DIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP-QSNLIVSGSFD 151
Query: 620 AATAKVQDAN 629
++ D N
Sbjct: 152 E-NVRIWDVN 160
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 242 (90.2 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 69/311 (22%), Positives = 135/311 (43%)
Query: 322 FLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQA 381
+ P + T EGHT IS ++ F +LL S S+D + LW + Y GH
Sbjct: 30 YKPYRHLKTLEGHTAAISCVK-FSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSG 87
Query: 382 VRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRD 441
+ D+ +++ +H S S DC +++W+ + C++ GH V
Sbjct: 88 ISDLAWSS--------------DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 442 ICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYC-VKFHPDED----KQH--- 493
+ FN +S +D +++W+ ++G+C+ + + V F+ D H
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 494 ---LDIPVD--MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFS-ALNRFKLNRKK 547
D +K + D ++ SPN K++ ++D+ + + + A +F K
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL----K 249
Query: 548 TFEGHMVAGYACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWH 606
+ GH + + FS + Y++SG D Y+WD + + ++ + H IS H
Sbjct: 250 VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCH 309
Query: 607 PHEPSKVVTAG 617
P + +++ ++G
Sbjct: 310 PVQ-NEISSSG 319
Score = 130 (50.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 61/271 (22%), Positives = 107/271 (39%)
Query: 365 VYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK 424
+YK R ++T GH A+ + F+N G +LL S S+D + LW
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDG--------------NLLASASVDKTMILWSA-T 73
Query: 425 EHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESG-ECISRFTSR-KVAYC 482
+ + Y GH + D+ +++ SA D L++WD S EC+ +C
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 483 VKFHP----------DEDKQHLDIPVDMKYIADPTMHSMP--AVTSSPNNKWLACQSMDN 530
V F+P DE + ++ K + HSMP +V + + + S D
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTG-KCVRMIKAHSMPISSVHFNRDGSLIVSASHDG 192
Query: 531 KILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLF 590
I+ A L + V+ +A FSP+ +++ D + ++ T K
Sbjct: 193 SCKIWDAKEGTCLKTLIDDKSPAVS-FA---KFSPNGKFILVATLDSTLKLSNYATGKFL 248
Query: 591 KKWKAHDG--VCISTLWHPHEPSKVVTAGWD 619
K + H CI++ + +V+ D
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSED 279
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 238 (88.8 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 71/292 (24%), Positives = 134/292 (45%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T GH+ IS++++ P + L S + D + +W Y + C +T YGH + D+ +++
Sbjct: 34 TLAGHSAAISSVKFSP-NGEWLASSAADALIIIWGAY-DGNCKKTLYGHSLEISDVAWSS 91
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
+ +SA S D +K+W++ + +C++T GH V FN
Sbjct: 92 DSSRLVSA--------------SDDKTLKVWDM-RSGKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-----VAY-C-----VKFHPDEDKQHLDIPV 498
+S +D +K+W+ ++G+C+ ++ V + C V D + D
Sbjct: 137 LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS 196
Query: 499 D--MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
++ +AD + V SPN K++ ++DN + ++ +R + KT+ GH
Sbjct: 197 GQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD-YSRGRC--LKTYTGHKNEK 253
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
Y FS +++SG D YIW+ +T ++ ++ + H V IS HP
Sbjct: 254 YCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHP 305
>UNIPROTKB|Q5EAA6 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0016601 "Rac
protein signal transduction" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0006911 "phagocytosis,
engulfment" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] InterPro:IPR001849
SMART:SM00233 GO:GO:0005886 GO:GO:0005737 GO:GO:0006911
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036
GO:GO:0006928 GO:GO:0016601 eggNOG:NOG295208
GeneTree:ENSGT00390000014155 KO:K12366 CTD:9844
HOGENOM:HOG000230985 HOVERGEN:HBG055277 OrthoDB:EOG42RD6S
EMBL:DAAA02010781 EMBL:DAAA02010782 EMBL:DAAA02010783
EMBL:DAAA02010784 EMBL:DAAA02010785 EMBL:DAAA02010786
IPI:IPI00702069 UniGene:Bt.16985 GeneID:509821 KEGG:bta:509821
NextBio:20869149 EMBL:BC118279 EMBL:BT020638 EMBL:BT020663
RefSeq:NP_001019676.1 STRING:Q5EAA6 Ensembl:ENSBTAT00000004537
InParanoid:Q5EAA6 Uniprot:Q5EAA6
Length = 247
Score = 225 (84.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 45/88 (51%), Positives = 69/88 (78%)
Query: 759 VVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELI 818
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE I
Sbjct: 3 VVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEKI 60
Query: 819 TPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
PEI++LI+QQRL LVEGT F K + R
Sbjct: 61 QPEILELIKQQRLNRLVEGTCFRKLNCR 88
>UNIPROTKB|F1SIM4 [details] [associations]
symbol:ELMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0016601 "Rac
protein signal transduction" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0006911 "phagocytosis,
engulfment" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] InterPro:IPR001849
SMART:SM00233 GO:GO:0005886 GO:GO:0005737 GO:GO:0006911
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030036
GO:GO:0006928 GO:GO:0016601 GeneTree:ENSGT00390000014155 KO:K12366
CTD:9844 EMBL:CU655944 EMBL:AEMK01146971 EMBL:CU468703
EMBL:CU640383 EMBL:CU695064 RefSeq:XP_003484084.1
Ensembl:ENSSSCT00000018134 GeneID:100522109 KEGG:ssc:100522109
OMA:KHEVRRW Uniprot:F1SIM4
Length = 247
Score = 225 (84.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 45/88 (51%), Positives = 69/88 (78%)
Query: 759 VVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELI 818
VV+EQ+ RAL+++P+SLD+F++ + L+Y+EI + Q ER ++E+++S +PI+ELKE I
Sbjct: 3 VVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEKI 60
Query: 819 TPEIVDLIQQQRLGYLVEGTRFTKYSSR 846
PEI++LI+QQRL LVEGT F K + R
Sbjct: 61 QPEILELIKQQRLNRLVEGTCFRKLNCR 88
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 225 (84.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 75/314 (23%), Positives = 137/314 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
LP + H +GH + A R F + L+C D ++LW ++ ++TY H + V
Sbjct: 6 LPTKEAHILKGHEGAVLAAR-FNGDGNYALTCGKDRTIRLWNPHRGI-LIKTYKSHGREV 63
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
RD+ + F S C D +V W+V R +R + GH V +
Sbjct: 64 RDVHVTSDNAKFCS--------------CGGDRQVYYWDV-STGRVIRKFRGHDGEVNAV 108
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESG-----ECISRF--TSRKVAYC----VKFHPDEDK 491
FN++ + +SAG+DR L++WD S + I F T V + D
Sbjct: 109 KFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTV 168
Query: 492 QHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ + + ++D + ++ S + + +D+ + + L+R + ++G
Sbjct: 169 RTFDMRIGRE-MSDNLGQPVNCISISNDGNCVLAGCLDSTLRL---LDRTTGELLQVYKG 224
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H+ + + +++I G DG + WD K+ K++AHD V S +HP E
Sbjct: 225 HISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC 284
Query: 612 KVVTAGWDAATAKV 625
++T+ D T +V
Sbjct: 285 -MLTSSVDG-TIRV 296
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 238 (88.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 80/332 (24%), Positives = 142/332 (42%)
Query: 293 PTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPK-TQVHTWEGHTKGISAIRWFPKSAHLL 351
P Q S P +N + P T T GHTK +SA+++ P + L
Sbjct: 29 PNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSP-NGEWL 87
Query: 352 LSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSC 411
S S D +K+W Y + + +T GH+ + D+ +++ + LL+S
Sbjct: 88 ASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSS--------------DSRLLVSG 132
Query: 412 SMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECI 471
S D +K+WE+ + ++T GH V FN +S +D +++WD +G+C+
Sbjct: 133 SDDKTLKVWEL-STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 191
Query: 472 SRFTSRK-VAYCVKFHPDED---KQHLD--IPV-D------MKYIADPTMHSMPAVTSSP 518
+ V F+ D D + D +K + D + V SP
Sbjct: 192 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 251
Query: 519 NNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS-PDMSYLISGDADG 577
N K++ ++DN + ++ ++ K KT+ GH Y +FS +++SG D
Sbjct: 252 NGKYILAATLDNTLKLWD-YSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 308
Query: 578 KCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
YIW+ ++ ++ +K + H + T HP E
Sbjct: 309 MVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE 340
>UNIPROTKB|C9JIW2 [details] [associations]
symbol:ELMO1 "Engulfment and cell motility protein 1"
species:9606 "Homo sapiens" [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0030029 "actin filament-based process"
evidence=IEA] GO:GO:0006909 GO:GO:0030029 InterPro:IPR024574
Pfam:PF11841 HGNC:HGNC:16286 ChiTaRS:ELMO1 EMBL:AC007349
EMBL:AC007444 EMBL:AC009196 EMBL:AC078843 EMBL:AC078844
EMBL:AC083861 IPI:IPI00925769 ProteinModelPortal:C9JIW2 SMR:C9JIW2
STRING:C9JIW2 Ensembl:ENST00000455879 ArrayExpress:C9JIW2
Bgee:C9JIW2 Uniprot:C9JIW2
Length = 149
Score = 223 (83.6 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 46/99 (46%), Positives = 70/99 (70%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFSASKTADDILSKL--SDKNASLE 724
KNRNEIKNG++LRL S ++ A + ++ S +A LE
Sbjct: 64 KNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLE 102
>MGI|MGI:3045255 [details] [associations]
symbol:Wdr25 "WD repeat domain 25" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3045255 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AC140111 GeneTree:ENSGT00530000063583
EMBL:AK081117 EMBL:AC122811 IPI:IPI00757781 IPI:IPI00989348
RefSeq:NP_808270.2 UniGene:Mm.342082 ProteinModelPortal:E9Q349
SMR:E9Q349 PRIDE:E9Q349 Ensembl:ENSMUST00000047115
Ensembl:ENSMUST00000167816 GeneID:212198 KEGG:mmu:212198 CTD:79446
eggNOG:NOG301329 HOGENOM:HOG000007841 HOVERGEN:HBG069845
OMA:YSVGCEC NextBio:373502 Bgee:E9Q349 Uniprot:E9Q349
Length = 535
Score = 253 (94.1 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 79/318 (24%), Positives = 144/318 (45%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPK--SAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
+PK + GH +++I+W P +H+LLS SMD K+W C++TY H +
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
AVR ++ G +S F + HL ++ +++ + R V T H +
Sbjct: 285 AVRAARWSPCGRRILSG--GFDFALHLT---DLETGTQVFSGQSDFR-VTTLKFHP---K 335
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESGECISRF--TSRKVAYCV------KFHPDEDKQ 492
D +N F+ G+ +K WD +G+ + + T ++ + +F D
Sbjct: 336 D---HNV---FLCGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDAS 389
Query: 493 HLD------IPVDMKY---IADPTMH---SMPAVTSSPNNKWLACQSMDNKILIFSALNR 540
D I D + I++ H + P++ P Q+ N + +FS++
Sbjct: 390 TRDSADRTIIAWDFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWP 449
Query: 541 FKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVC 600
++++R++ +EGH V GYA + SP L++G ADG+ ++ ++T + H C
Sbjct: 450 YRMSRRRRYEGHKVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQAC 509
Query: 601 ISTLWHPHEPSKVVTAGW 618
+ T +HP PS + T W
Sbjct: 510 LGTTYHPVLPSVLGTCSW 527
Score = 37 (18.1 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 143 NKTVFESTSKRPLDKRKRNRNDC 165
+++ FEST+ +++ DC
Sbjct: 141 DQSTFESTAGNASSSQRKRGEDC 163
Score = 37 (18.1 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 210 NKTVFESTSKRPLDKRKRNRNDC 232
+++ FEST+ +++ DC
Sbjct: 141 DQSTFESTAGNASSSQRKRGEDC 163
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/280 (26%), Positives = 117/280 (41%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
+GHT + + F LL SCS D +KLW+ + C++T +GH V + F G
Sbjct: 147 KGHTDSVQDVA-FDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG 205
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
+++ LS S D +K+WEV + CV+TY GHR+ VR + + G+ F
Sbjct: 206 -DYV-------------LSASRDRTIKMWEVATGY-CVKTYTGHREWVRMVRVHIEGSIF 250
Query: 452 ISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHS 510
+ D+ +++W T S +C + C+ + P+ ++ AD +
Sbjct: 251 ATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG----AD----N 302
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
P +LA S D I I+ L T GH + L F P YL
Sbjct: 303 KKGHHQGP---FLASGSRDKTIRIWDVSVGLCL---LTLSGH--DNWVRGLAFHPGGKYL 354
Query: 571 ISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEP 610
+S D +WD + + K AH C S +H P
Sbjct: 355 VSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHP 394
Score = 202 (76.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 45/155 (29%), Positives = 78/155 (50%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH I+ + + P A L++S S D +++W+ ++ R+ GH +V+D+ F+ G
Sbjct: 106 GHRASITRVIFHPIFA-LMVSASEDATIRIWD-FETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
LL SCS D +KLW+ + + C++T +GH V + F G +
Sbjct: 164 --------------LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL 209
Query: 453 SAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFH 486
SA DR +K+W+ +G C+ +T R+ V+ H
Sbjct: 210 SASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVH 244
Score = 148 (57.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 44/168 (26%), Positives = 80/168 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ + P ++L S S D +K+WEV CV+TY GHR+ VR +
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEV-ATGYCVKTYTGHREWVRMVRV 243
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICF-- 444
+ G+ F + ++ + L+ S DC+V+L + C+ A+ +
Sbjct: 244 HIEGSIFATCSN--DQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGAD 301
Query: 445 NNTGTN---FISAGY-DRYLKLWDTESGECISRFTSR-KVAYCVKFHP 487
N G + F+++G D+ +++WD G C+ + + FHP
Sbjct: 302 NKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHP 349
Score = 70 (29.7 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 518 PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADG 577
P K+L S D I ++ N+ + KT H + S+DF Y+ISG D
Sbjct: 349 PGGKYLVSASDDKTIRVWDLRNKRCM---KTLYAHQ--HFCTSIDFHKAHPYVISGSVDQ 403
Query: 578 KCYIWD 583
+W+
Sbjct: 404 TVKVWE 409
>UNIPROTKB|C9JB20 [details] [associations]
symbol:ELMO1 "Engulfment and cell motility protein 1"
species:9606 "Homo sapiens" [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0030029 "actin filament-based process"
evidence=IEA] GO:GO:0006909 GO:GO:0030029 HGNC:HGNC:16286
ChiTaRS:ELMO1 EMBL:AC007349 EMBL:AC007444 EMBL:AC009196
EMBL:AC078843 EMBL:AC078844 EMBL:AC083861 IPI:IPI00925487
ProteinModelPortal:C9JB20 STRING:C9JB20 Ensembl:ENST00000453399
ArrayExpress:C9JB20 Bgee:C9JB20 Uniprot:C9JB20
Length = 81
Score = 209 (78.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 41/77 (53%), Positives = 59/77 (76%)
Query: 628 ANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITE 687
A+IVK+A+E P+L + +Q LS+II+E+C GWSL++ E +ALQ ++++N YITE
Sbjct: 5 ADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNF-YITE 63
Query: 688 KNRNEIKNGSVLRLAFS 704
KNRNEIKNG++LRL S
Sbjct: 64 KNRNEIKNGTILRLTTS 80
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 232 (86.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 93/304 (30%), Positives = 132/304 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T +H ++ H ++A+R+ P S LL + MD RVKLWEV R C + A+
Sbjct: 305 VPSTALHIFDAHDGEVNAVRFSPGS-RLLATGGMDRRVKLWEVVSGR-CEP-----KGAL 357
Query: 383 RDICFNNTGTNF-ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRD 441
TG+N I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 358 -------TGSNAGITSIE-FDSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLS 408
Query: 442 ICFNNTGTNFISAGYDRYLKLWDTESGECISR--FTSRK------VAYCVKF-HPDEDKQ 492
F +S YDR LKLWD S C + F CV H D+ +
Sbjct: 409 ARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKKVR 468
Query: 493 HLDIPVDMKYIADPTMHSMPAVTSSPNN----KWLACQSMDNKILIFSALNRFKLNR-KK 547
DI Y ++ + VTS N + L C S D+ + I + N ++
Sbjct: 469 FWDISYQ-NYHIQKQLNKLCRVTSLDLNHDRTELLTC-SRDDLVKIID----LRTNAVRQ 522
Query: 548 TFEGHMVAGYACSLDF-----SPDMSYLISGDADGKCYIWDWKTTKLFKKW-KAHDGVCI 601
TF G+ C DF SPD S++ +G ADG Y+W+ T KL K K H
Sbjct: 523 TFNAQ---GFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAIN 579
Query: 602 STLW 605
S W
Sbjct: 580 SVSW 583
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 225 (84.3 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 48/147 (32%), Positives = 80/147 (54%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H + + I +
Sbjct: 352 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDACVHDLQAHSKEIYTIKW 409
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S+ +L S S D V+LW+V ++ C T H++ V + F+
Sbjct: 410 SPTGPATSN-----PNSSIMLASASFDSTVRLWDV-EQGVCTHTLMKHQEPVYSVAFSPD 463
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+Y+ +W+T+SG + +
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVHSY 490
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/152 (22%), Positives = 60/152 (39%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P + GH + W P S LL S S D ++W + + T R +
Sbjct: 167 IPPNKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 225
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
R+ + ++++ W LL S D ++W + T H+ + +
Sbjct: 226 REGGHDVPSNKDVTSLDW-NSDGTLLAMGSYDGFARIWT--ENGNLASTLGQHKGPIFAL 282
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+N G +SAG D+ +WD +GE +F
Sbjct: 283 KWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQF 314
Score = 84 (34.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 512 PAVTSSPNNK-WLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
PA TS+PN+ LA S D+ + ++ + T H Y S+ FSPD YL
Sbjct: 414 PA-TSNPNSSIMLASASFDSTVRLWDVEQGVCTH---TLMKHQEPVY--SVAFSPDGKYL 467
Query: 571 ISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWH 606
SG D +IW+ ++ L ++ G+ W+
Sbjct: 468 ASGSFDKYVHIWNTQSGSLVHSYQGTGGI-FEVCWN 502
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 226 (84.6 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 88/308 (28%), Positives = 136/308 (44%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWEV+ ++ C + G
Sbjct: 326 VPTTAMSVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGDK-C--EFKG----- 376
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 377 -SLSGSNAG---ITSIE-FDSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 430
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR-FTSRK------VAYCVKF-HPDEDKQHL 494
F +S +DR LKLWD S CI F CV H D+ +
Sbjct: 431 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW 490
Query: 495 DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHM 553
DI + + + A+ +P L S D+ + I ++N ++TF
Sbjct: 491 DIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIID----LRINAVRQTFSA-- 544
Query: 554 VAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-WHP 607
G+ C D FSPD SY+ +G A+G YIW+ + K+ K H I+ + W P
Sbjct: 545 -PGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSP 603
Query: 608 HEPSKVVT 615
S VVT
Sbjct: 604 -AGSHVVT 610
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 225 (84.3 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 89/308 (28%), Positives = 133/308 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWEV+ E+ C + G
Sbjct: 310 VPATALCVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGEK-C--EFKG----- 360
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 361 -SLSGSNAG---ITSIE-FDSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 414
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR-FTSRK------VAYCVKF-HPDEDKQHL 494
F +S +DR LKLWD S CI F CV H D+ +
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW 474
Query: 495 DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHM 553
DI + + + A+ +P L S D+ + + + N K+TF
Sbjct: 475 DIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVID----LRTNAIKQTFSA-- 528
Query: 554 VAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKW-KAHDGVCISTLWHP 607
G+ C D FSPD SY+ +G A+G YIW T K+ K K H + W P
Sbjct: 529 -PGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSP 587
Query: 608 HEPSKVVT 615
S VV+
Sbjct: 588 -SGSHVVS 594
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 223 (83.6 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 50/164 (30%), Positives = 86/164 (52%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV HR+ + I +
Sbjct: 348 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDACVHNLQAHRKEIYTIKW 405
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S+ +L S S D V+LW++ ++ C T H++ V + F+
Sbjct: 406 SPTGPTTSN-----PNSSIMLASASFDSTVRLWDM-EQGVCTHTLRKHQEPVYSVAFSPD 459
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDK 491
G S +D+ + +W+T+SG + + + V ++ DK
Sbjct: 460 GKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQGDK 503
Score = 154 (59.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 47/146 (32%), Positives = 70/146 (47%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 330 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 374
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG---TN------FISAGYDRYLKLW 463
D +K+W + K+ CV HR+ + I ++ TG +N SA +D ++LW
Sbjct: 375 DDMTLKIWSM-KQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLW 433
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G C ++ Y V F PD
Sbjct: 434 DMEQGVCTHTLRKHQEPVYSVAFSPD 459
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 509 HSMP--AVTSSPNNKWLACQSMDNKILIFS 536
H P +V SP+ K+LA S D + I++
Sbjct: 447 HQEPVYSVAFSPDGKYLASGSFDKCVHIWN 476
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 218 (81.8 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T EGHTK ISA+++ P L S S D VK+W + + C RT GH+ V D +
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTS-SADKTVKIWNM-SDLSCERTLTGHKLGVNDFAW 129
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ + ++A S D +K++EV + +T GH V FN
Sbjct: 130 SADSKSIVTA--------------SDDKTLKIYEV-PTVKMAKTLKGHTNYVFCCNFNPQ 174
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLDIPV---D- 499
+ +S +D +++WD +G C+ + V F+ D D V D
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 500 -----MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
+K + D + V SPN K++ ++DN + ++ + K K ++GH
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD-FGKGKT--LKQYQGHEN 291
Query: 555 AGYACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
Y +FS ++ISG D K Y+W+ +T ++ + + H I++ HP
Sbjct: 292 NKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHP 345
Score = 159 (61.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
TN++ + P+S+ L++S S D V++W+V + CV+T H V + FN G+
Sbjct: 163 TNYVFCCNFNPQSS-LVVSGSFDESVRIWDV-RTGMCVKTLPAHSDPVSAVSFNRDGSLI 220
Query: 452 ISAGYDRYLKLWDTESGECISRFTSRK---VAYCVKFHPDED---KQHLDIPVDM----- 500
S YD +++WDT +G+C+ + VA+ VKF P+ +LD + +
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF-VKFSPNGKYILSSNLDNTLKLWDFGK 279
Query: 501 -KYIADPTMHS-----MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
K + H + A S KW+ S D KI +++ + + ++ EGH
Sbjct: 280 GKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVV---QSLEGHTQ 336
Query: 555 AGYACSLDFSPDMSYLISG--DADGKCYIW 582
A A D P + + SG + D IW
Sbjct: 337 AVIAS--DCHPMQNMIASGALEPDNTIRIW 364
Score = 37 (18.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/66 (27%), Positives = 24/66 (36%)
Query: 175 PFENQRRTFASYGYALDPSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRKRNRND--C 232
P +Q T GY L + E +K I A K F TS + N +D C
Sbjct: 56 PTTSQESTIPGAGYKLISTIEGHTKSISAVKFSPCGK--FLGTSSADKTVKIWNMSDLSC 113
Query: 233 PEDIEG 238
+ G
Sbjct: 114 ERTLTG 119
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 167 (63.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/163 (30%), Positives = 75/163 (46%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
++T+EGH GIS I W P A + S S D ++LW V + + GH
Sbjct: 211 IYTFEGHLAGISTISWSPDGA-TIASGSDDKTIRLWNVLTGKAHPTPFIGHH-------- 261
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
N++ AI + PK ++L+S S D V LW+V + R +++ H V I
Sbjct: 262 -----NYVYAIAFSPKG-NMLVSGSYDEAVFLWDV-RSARVMKSLPAHSDPVSGIDVVWD 314
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFT--SRKVAYCVKFHPD 488
GT S D +++WDT +G+C+ VKF P+
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPN 357
Score = 142 (55.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 41/135 (30%), Positives = 58/135 (42%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH +G+SA+R+ P A ++ S D VK+W + + T+ GH
Sbjct: 174 GHLRGVSAVRFSP-DASMIASGGADGAVKVWAA-STGKLIYTFEGHLAG----------- 220
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
IS I W P A + S S D ++LW V + GH V I F+ G +
Sbjct: 221 --ISTISWSPDGA-TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLV 277
Query: 453 SAGYDRYLKLWDTES 467
S YD + LWD S
Sbjct: 278 SGSYDEAVFLWDVRS 292
Score = 105 (42.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDF--------- 563
+V SPN K++ ++D+ + ++ + L KT++GH Y+ S F
Sbjct: 351 SVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL---KTYQGHSNKKYSLSGAFGVYGQSIPG 407
Query: 564 -SPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCIST-LWHPHEPSKVVTAGWDAA 621
+P ++ +SG DG WD T K+ ++ +AHDGV + E +V+ G D
Sbjct: 408 RTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDG- 466
Query: 622 TAKV 625
T +V
Sbjct: 467 TVRV 470
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 220 (82.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 51/154 (33%), Positives = 82/154 (53%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
C LP V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H +
Sbjct: 348 CDLP---VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDACVHDLQAHSK 402
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+ I ++ TG + P S+ +L S S D V+LW+V ++ C T H++ V
Sbjct: 403 EIYTIKWSPTGPATSN-----PNSSIMLASASFDSTVRLWDV-EQGVCTHTLTKHQEPVY 456
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
I F+ G S +D+ + +W+T+SG + +
Sbjct: 457 SIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSY 490
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 78/277 (28%), Positives = 124/277 (44%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F ++ LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDQTGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTMKMWEVATGY-CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ H P I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPES--AH---PT----ISEAT-GSENKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F P +++S D IW
Sbjct: 311 LLSGSRDKTIKMWDISTGMCL---MTLVGH--DNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPY-VVTGSVD 401
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 44/141 (31%), Positives = 72/141 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
L++S S D +K+W+ Y+ RT GH +V+DI F+ TG LL
Sbjct: 122 LMVSASEDATIKVWD-YEAGDFERTLKGHTDSVQDISFDQTGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ +G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 45/170 (26%), Positives = 72/170 (42%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTMKMWEV-ATGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR--TYYGHRQAVRDIC 443
N GT S ++ + + + +C+ +L E EH C+ H
Sbjct: 243 NQDGTLLASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESAHPTISEATG 298
Query: 444 FNNT-----GTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHP 487
N G +S D+ +K+WD +G C+ V FHP
Sbjct: 299 SENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHP 348
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W++ C+ T GH VR + F+ G F+
Sbjct: 306 KPGPFLLSGSRDKTIKMWDI-STGMCLMTLVGHDNWVRGVLFH-PGGRFV---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
+SC+ D +++W+ YK RC++T H V + F+ ++ D+ +K+W+
Sbjct: 354 ---VSCADDKTLRIWD-YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 211 (79.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 71/316 (22%), Positives = 133/316 (42%)
Query: 312 LRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-- 369
+ + P F P T H + +S+++ F LL S S D ++ + +
Sbjct: 1 MAEEIPATASFTPYVHSQTLTSHNRAVSSVK-FSSDGRLLASASADKTIRTYTINTINDP 59
Query: 370 --RCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR 427
V+ + GH + D+ F++ A ++S S D +KLW+V +
Sbjct: 60 IAEPVQEFTGHENGISDVAFSS--------------DARFIVSASDDKTLKLWDV-ETGS 104
Query: 428 CVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFH 486
++T GH + FN +S +D +++WD +G+C+ + V F+
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 487 PDED---KQHLD--IPV-D------MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILI 534
D D + D +K + D + V SPN K++ ++DN + +
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Query: 535 FSALNRFKLNRKKTFEGHMVAGYACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKW 593
++ ++ K KT+ GH+ A Y S FS + ++SG D ++W+ + KL +K
Sbjct: 225 WN-ISSAKF--LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL 281
Query: 594 KAHDGVCISTLWHPHE 609
+ H ++ HP E
Sbjct: 282 EGHTETVMNVACHPTE 297
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/263 (22%), Positives = 108/263 (41%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH----RCVRTYYGHRQAVRDICFNNTGTN 450
+S+++ F LL S S D ++ + + + V+ + GH + D+ F++
Sbjct: 27 VSSVK-FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARF 85
Query: 451 FISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHP----------DEDKQHLDIPVD 499
+SA D+ LKLWD E+G I A+CV F+P DE + D+
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 500 MKYIADPTMHSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
K + HS P AV + + + S D I+ + + E V+
Sbjct: 146 -KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVS-- 202
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVT 615
+ FSP+ +++ G D +W+ + K K + H CIS+ + ++V+
Sbjct: 203 --FVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 616 AGWDAATAKVQDANIVKIAVEME 638
D + + N K+ ++E
Sbjct: 261 GSEDNCV-HMWELNSKKLLQKLE 282
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/302 (25%), Positives = 136/302 (45%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T EGHTK IS+ ++ P +L S S D VK+W + C RT GH+ V DI +++
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTS-SADKTVKIWNM-DHMICERTLTGHKLGVNDIAWSS 139
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
+ ++S S D +K++E+ R +T GH V FN +
Sbjct: 140 --------------DSRCVVSASDDKTLKIFEIVTS-RMTKTLKGHNNYVFCCNFNPQSS 184
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLDIPV---D--- 499
+S +D +++WD ++G CI + V F+ D D V D
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++D+ + ++ ++ K K + GH +
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD-FSKGKT--LKQYTGHENSK 301
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVT 615
Y +FS ++ISG D K YIW+ +T ++ + + H +++ HP + ++
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQ--NIIA 359
Query: 616 AG 617
+G
Sbjct: 360 SG 361
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 69/251 (27%), Positives = 111/251 (44%)
Query: 351 LLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLS 410
++S S D +K++E+ R +T GH N++ + P+S+ L++S
Sbjct: 144 VVSASDDKTLKIFEIVTSRM-TKTLKGHN-------------NYVFCCNFNPQSS-LVVS 188
Query: 411 CSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGEC 470
S D V++W+V K C++T H V + FN G+ S YD +++WDT +G+C
Sbjct: 189 GSFDESVRIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 471 ISRFTSRK---VAYCVKFHPDED---KQHLDIPVDM------KYIADPTMHSMP-----A 513
I + VA+ VKF P+ +LD + + K + T H A
Sbjct: 248 IKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
S KW+ S D KI I++ R + + EGH A D P + + SG
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQTREIV---QCLEGHTQPVLAS--DCHPVQNIIASG 361
Query: 574 --DADGKCYIW 582
+ D K +IW
Sbjct: 362 ALEPDNKIHIW 372
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/233 (25%), Positives = 99/233 (42%)
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR-CVRTYYGHRQAVRDIC 443
+C T IS+ ++ P +L S S D VK+W + +H C RT GH+ V DI
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTS-SADKTVKIWNM--DHMICERTLTGHKLGVNDIA 136
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHP----------DEDKQ 492
+++ +SA D+ LK+++ + +C F+P DE +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 493 HLDIPVDMKYIADPTMHSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
D+ M P HS P AV+ + + +A S D + I+ N + E
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG--VCI 601
VA + FSP+ Y+++ + D +WD+ K K++ H+ CI
Sbjct: 256 NPPVA----FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/302 (25%), Positives = 136/302 (45%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T EGHTK IS+ ++ P +L S S D VK+W + C RT GH+ V DI +++
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTS-SADKTVKIWNM-DHMICERTLTGHKLGVNDIAWSS 139
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
+ ++S S D +K++E+ R +T GH V FN +
Sbjct: 140 --------------DSRCVVSASDDKTLKIFEIVTS-RMTKTLKGHNNYVFCCNFNPQSS 184
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLDIPV---D--- 499
+S +D +++WD ++G CI + V F+ D D V D
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 500 ---MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+K + D + V SPN K++ ++D+ + ++ ++ K K + GH +
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD-FSKGKT--LKQYTGHENSK 301
Query: 557 YACSLDFS-PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVT 615
Y +FS ++ISG D K YIW+ +T ++ + + H +++ HP + ++
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQ--NIIA 359
Query: 616 AG 617
+G
Sbjct: 360 SG 361
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 69/251 (27%), Positives = 111/251 (44%)
Query: 351 LLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLS 410
++S S D +K++E+ R +T GH N++ + P+S+ L++S
Sbjct: 144 VVSASDDKTLKIFEIVTSRM-TKTLKGHN-------------NYVFCCNFNPQSS-LVVS 188
Query: 411 CSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGEC 470
S D V++W+V K C++T H V + FN G+ S YD +++WDT +G+C
Sbjct: 189 GSFDESVRIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 471 ISRFTSRK---VAYCVKFHPDED---KQHLDIPVDM------KYIADPTMHSMP-----A 513
I + VA+ VKF P+ +LD + + K + T H A
Sbjct: 248 IKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
S KW+ S D KI I++ R + + EGH A D P + + SG
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQTREIV---QCLEGHTQPVLAS--DCHPVQNIIASG 361
Query: 574 --DADGKCYIW 582
+ D K +IW
Sbjct: 362 ALEPDNKIHIW 372
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/233 (25%), Positives = 99/233 (42%)
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR-CVRTYYGHRQAVRDIC 443
+C T IS+ ++ P +L S S D VK+W + +H C RT GH+ V DI
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTS-SADKTVKIWNM--DHMICERTLTGHKLGVNDIA 136
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHP----------DEDKQ 492
+++ +SA D+ LK+++ + +C F+P DE +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 493 HLDIPVDMKYIADPTMHSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
D+ M P HS P AV+ + + +A S D + I+ N + E
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG--VCI 601
VA + FSP+ Y+++ + D +WD+ K K++ H+ CI
Sbjct: 256 NPPVA----FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 215 (80.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 77/277 (27%), Positives = 121/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHTGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S+ D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVATGY-CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ H P ++ T S P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPES--AH---PTILEATGSETKKS-----GKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + P Y++S D IW
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCL---MTLVGH--DNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ ++ RT GH +V+DI F++TG LL
Sbjct: 122 VIVSASEDATIKVWD-HETGDFERTLKGHTDSVQDISFDHTGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ +G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-ATGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-TYYGHRQAVRDICF 444
N GT S+ ++ + + + +C+ +L E EH C+ + +
Sbjct: 243 NQDGTLIASSSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESAHPTILEATG 298
Query: 445 NNT------GTNFISAGYDRYLKLWDTESGECI 471
+ T G +S D+ +K+WD G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCL 331
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + + G +I
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-SIGMCLMTLVGHDNWVRGVLVH-PGGKYI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
+SC+ D +++W+ YK RC +T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---VSCADDKTLRIWD-YKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 218 (81.8 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 84/302 (27%), Positives = 131/302 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T V ++ H ++A+++ P S LL + MD RVKLWEV+ ++ C + G
Sbjct: 310 VPVTAVCVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGDK-C--EFKG----- 360
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 361 -SLSGSNAG---ITSIE-FDSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 414
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR-FTSRK------VAYCVKF-HPDEDKQHL 494
F +S +DR LKLWD S CI F CV H D+ +
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW 474
Query: 495 DIPVDMKYIAD--PTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEG 551
DI + + + + A +P L S D+ + I ++N ++TF
Sbjct: 475 DIRYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIID----LRINAVRQTFSA 530
Query: 552 HMVAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-W 605
G+ C D FSPD SY+ +G A+G Y+W + K+ K H I+ + W
Sbjct: 531 ---PGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPINAVAW 587
Query: 606 HP 607
P
Sbjct: 588 SP 589
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 211 (79.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 93 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 138
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 139 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 197 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 245
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 336
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 57 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 101
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 102 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 160
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 161 CVKTFTGHR-EWVRMVRPNQD 180
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 177
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 178 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 233
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 234 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 266
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 241 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 288
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 289 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 217 (81.4 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 83/300 (27%), Positives = 128/300 (42%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWE + ++ C + G
Sbjct: 310 VPTTASYVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEAFGDK-C--EFKG----- 360
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 361 -SLSGSNAG---ITSIE-FDSAGAYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 414
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR-FTSRK------VAYCVKF-HPDEDKQHL 494
F +S +DR LKLWD S CI F CV H D+ +
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW 474
Query: 495 DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHM 553
DI + + + A+ +P L S D+ + + + N K+TF
Sbjct: 475 DIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVID----LRTNAVKQTFSA-- 528
Query: 554 VAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKW-KAHDGVCISTLWHP 607
G+ C D FSPD SY+ +G A+G Y+W T K+ K K H + W P
Sbjct: 529 -PGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 587
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 214 (80.4 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 47/147 (31%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H + + I +
Sbjct: 356 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDTCVHDLQAHSKEIYTIKW 413
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S+ +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 414 SPTGPATSN-----PNSSIMLASASFDSTVRLWDV-ERGVCLHTLTKHQEPVYSVAFSPD 467
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 468 GKYLASGSFDKCVHIWNTQSGSLVHSY 494
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 47/146 (32%), Positives = 71/146 (48%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 338 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 382
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG---TN------FISAGYDRYLKLW 463
D +K+W + K+ CV H + + I ++ TG +N SA +D ++LW
Sbjct: 383 DDMTLKIWSM-KQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G C+ T ++ Y V F PD
Sbjct: 442 DVERGVCLHTLTKHQEPVYSVAFSPD 467
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 215 (80.7 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 86/308 (27%), Positives = 134/308 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWEV+ ++ C + G
Sbjct: 310 VPTTAMCIFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGDK-C--EFKG----- 360
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 361 -SLSGSNAG---ITSIE-FDSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 414
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR-FTSRK------VAYCVKF-HPDEDKQHL 494
F +S +DR LKLWD S CI F CV H D+ +
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW 474
Query: 495 DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHM 553
DI + + + A+ +P L S D+ + I ++N ++TF
Sbjct: 475 DIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIID----LRINAVRQTFSA-- 528
Query: 554 VAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-WHP 607
G+ C D FSPD Y+ +G A+G YIW + K+ K G I+ + W P
Sbjct: 529 -PGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSP 587
Query: 608 HEPSKVVT 615
S VV+
Sbjct: 588 -SGSHVVS 594
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 195 (73.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVEDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 191 (72.3 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 58/230 (25%), Positives = 104/230 (45%)
Query: 355 SMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMD 414
S D +KLW+ ++ C+RT +GH D +N +S++ P H++ S S D
Sbjct: 1 SADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPNGDHIV-SASRD 45
Query: 415 CRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W + EC +
Sbjct: 46 KTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 104
Query: 475 TSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKIL 533
+ V C+ + P+ + + D + + + S L+C D +
Sbjct: 105 REHEHVVECISWAPESSYSSISEATGSEVGHDNWVRGV--LFHSGGKFILSCAD-DKTLR 161
Query: 534 IFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
++ N+ + KT H + SLDF Y+++G D +W+
Sbjct: 162 VWDYKNKRCM---KTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 156 (60.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 17 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 74
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TY-------- 432
N GT S ++ + + + +C+ +L E EH C+ +Y
Sbjct: 75 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 130
Query: 433 --YGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFH 486
GH VR + F++ G +S D+ L++WD ++ C+ + + + FH
Sbjct: 131 SEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 187
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H + + I +
Sbjct: 355 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDACVHDLQAHSKEIYTIKW 412
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 413 SPTGPATSN-----PNSNIMLASASFDSTVRLWDV-ERGVCIHTLTKHQEPVYSVAFSPD 466
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSY 493
Score = 160 (61.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 48/146 (32%), Positives = 72/146 (49%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 337 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 381
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG-------TNFI--SAGYDRYLKLW 463
D +K+W + K+ CV H + + I ++ TG +N + SA +D ++LW
Sbjct: 382 DDMTLKIWSM-KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G CI T ++ Y V F PD
Sbjct: 441 DVERGVCIHTLTKHQEPVYSVAFSPD 466
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H + + I +
Sbjct: 355 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDACVHDLQAHSKEIYTIKW 412
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 413 SPTGPATSN-----PNSNIMLASASFDSTVRLWDV-ERGVCIHTLTKHQEPVYSVAFSPD 466
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSY 493
Score = 160 (61.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 48/146 (32%), Positives = 72/146 (49%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 337 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 381
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG-------TNFI--SAGYDRYLKLW 463
D +K+W + K+ CV H + + I ++ TG +N + SA +D ++LW
Sbjct: 382 DDMTLKIWSM-KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G CI T ++ Y V F PD
Sbjct: 441 DVERGVCIHTLTKHQEPVYSVAFSPD 466
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ CV H + + I +
Sbjct: 351 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQDTCVHDLQAHSKEIYTIKW 408
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 409 SPTGPGTSN-----PNSNIMLASASFDSTVRLWDVDRGV-CIHTLTKHQEPVYSVAFSPD 462
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 463 GKYLASGSFDKCVHIWNTQSGTLVHSY 489
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/146 (32%), Positives = 72/146 (49%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 333 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 377
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG-------TNFI--SAGYDRYLKLW 463
D +K+W + K+ CV H + + I ++ TG +N + SA +D ++LW
Sbjct: 378 DDMTLKIWSM-KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLW 436
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D + G CI T ++ Y V F PD
Sbjct: 437 DVDRGVCIHTLTKHQEPVYSVAFSPD 462
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 73/277 (26%), Positives = 115/277 (41%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S LL SCS D +KLW+ ++ C+RT +GH V + G + +SA R
Sbjct: 158 FDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR---- 212
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 213 ----------DKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSS---------ISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F+++G LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/153 (26%), Positives = 72/153 (47%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S + D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TYYGHRQAVR 440
N GT S ++ + + + +C+ +L E EH C+ +Y +A
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 298
Query: 441 DICFNN--TGTNFISAGYDRYLKLWDTESGECI 471
+ G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W+V C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 210 (79.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 49/166 (29%), Positives = 89/166 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +KLW + K+ CV H + + I +
Sbjct: 338 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKLWSM-KQDTCVHDLQAHSKEIYTIKW 395
Query: 388 NNTGTNFISAIRWFPKSAHLLL--SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN 445
+ TG + P +A+L+L S S D V+LW+ + C+ T H++ V + F+
Sbjct: 396 SPTGPGTNN-----P-NANLMLARSASFDSTVRLWDA-ERGACIHTLTKHQEPVYSVAFS 448
Query: 446 NTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDK 491
G + S +D+ + +W+T+SG ++ + + V ++ DK
Sbjct: 449 PDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDK 494
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 51/166 (30%), Positives = 80/166 (48%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ +ER ++T+ GH TN
Sbjct: 303 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQERP-IKTFQGH-------------TN 346
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF-------NN 446
++AI+W P + +LL SCS D +KLW + K+ CV H + + I + NN
Sbjct: 347 EVNAIKWDP-TGNLLASCSDDMTLKLWSM-KQDTCVHDLQAHSKEIYTIKWSPTGPGTNN 404
Query: 447 TGTNFI---SAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
N + SA +D ++LWD E G CI T ++ Y V F PD
Sbjct: 405 PNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPD 450
Score = 121 (47.7 bits), Expect = 0.00096, P = 0.00096
Identities = 40/167 (23%), Positives = 70/167 (41%)
Query: 310 TNLRSDTPP-DRCF-LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYK 367
+N SD DR +P ++ GH + W P S LL S S D ++W + +
Sbjct: 138 SNHHSDMMEVDRAVEIPASKAMVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLSE 196
Query: 368 ERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR 427
T R +R+ + ++++ W + LL + S D ++W K+
Sbjct: 197 SSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT-LLATGSYDGFARIWT--KDGN 253
Query: 428 CVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
T H+ + + +N G +SAG D+ +WD +GE +F
Sbjct: 254 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQF 300
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 75/295 (25%), Positives = 124/295 (42%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH + +++ P L+ S S D + LW V+ + + GH+ A+ D+ + + G+
Sbjct: 51 GHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGS 109
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
+SA S D V+ W+V + + ++ H V C G I
Sbjct: 110 QIVSA--------------SPDKTVRAWDV-ETGKQIKKMAEHSSFVNSCCPTRRGPPLI 154
Query: 453 SAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL-----DIPV-DMKYIAD 505
+G D KLWD I F + V F DK D+ V D++ +
Sbjct: 155 ISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRK-GE 213
Query: 506 PTM----H--SMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHMVAGYA 558
TM H ++ ++ SP+ +L MDNK+ ++ NR K FEGH +
Sbjct: 214 ATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQ-HNFE 272
Query: 559 CSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEP 610
+L +SPD + + +G +D +IWD + + K H G ++HP EP
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEP 327
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 206 (77.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 74/277 (26%), Positives = 120/277 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + LL SCS D +KLW+ ++ C+RT +GH D +N +S++ P
Sbjct: 158 FDHTGKLLASCSADMTIKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPN 203
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
H++ S S D +K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W
Sbjct: 204 GDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKW 522
+ EC + + V C+ + P+ I++ T S + P +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESS---------YSTISEAT-GSETKKSGKPG-PF 310
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L S D I ++ L T GH + + F +++S D +W
Sbjct: 311 LLSGSRDKTIKMWDISTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
D+K + K AH+ S +H P VVT D
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVD 401
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/141 (30%), Positives = 74/141 (52%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++S S D +K+W+ Y+ RT GH +V+DI F++TG LL
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHTGK--------------LLA 166
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
SCS D +KLW+ ++ C+RT +GH V + G + +SA D+ +K+W+ ++G
Sbjct: 167 SCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 470 CISRFTSRKVAYCVKFHPDED 490
C+ FT + + P++D
Sbjct: 226 CVKTFTGHR-EWVRMVRPNQD 245
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-TYYGHRQAVRDICF 444
N GT S ++ + + + +C+ +L E EH C+ + +
Sbjct: 243 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSTISEATG 298
Query: 445 NNT------GTNFISAGYDRYLKLWDTESGECI 471
+ T G +S D+ +K+WD +G C+
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LLS S D +K+W++ C+ T GH VR + F++ G FI
Sbjct: 306 KPGPFLLSGSRDKTIKMWDI-STGMCLMTLVGHDNWVRGVLFHSGG-KFI---------- 353
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
LSC+ D +++W+ +K RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 354 ---LSCADDKTLRVWD-FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 209 (78.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ C+ H + + I +
Sbjct: 397 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQEVCIHDLQAHNKEIYTIKW 454
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S +L S S D V+LW++ + C T H++ V + F+
Sbjct: 455 SPTGPATSN-----PNSNIMLASASFDSTVRLWDI-ERGVCTHTLTKHQEPVYSVAFSPD 508
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 509 GRYLASGSFDKCVHIWNTQSGNLVHSY 535
Score = 153 (58.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 46/146 (31%), Positives = 71/146 (48%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 379 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 423
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG-------TNFI--SAGYDRYLKLW 463
D +K+W + K+ C+ H + + I ++ TG +N + SA +D ++LW
Sbjct: 424 DDMTLKIWSM-KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 482
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G C T ++ Y V F PD
Sbjct: 483 DIERGVCTHTLTKHQEPVYSVAFSPD 508
Score = 119 (46.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 34/152 (22%), Positives = 63/152 (41%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P ++ GH + W P S LL S S D ++W + + T R +
Sbjct: 212 IPSSKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 270
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
R+ + ++++ W LL + S D ++W ++ T H+ + +
Sbjct: 271 REGGHDVPSNKDVTSLDWNTNGT-LLATGSYDGFARIWT--EDGNLASTLGQHKGPIFAL 327
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+N G +SAG D+ +WD +GE +F
Sbjct: 328 KWNRKGNYILSAGVDKTTIIWDAHTGEAKQQF 359
Score = 91 (37.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 512 PAVTSSPN-NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
PA TS+PN N LA S D+ + ++ + R T H Y S+ FSPD YL
Sbjct: 459 PA-TSNPNSNIMLASASFDSTVRLWD-IERGVCTH--TLTKHQEPVY--SVAFSPDGRYL 512
Query: 571 ISGDADGKC-YIWDWKTTKLFKKWKAHDGVCISTLWH 606
SG D KC +IW+ ++ L ++ G+ W+
Sbjct: 513 ASGSFD-KCVHIWNTQSGNLVHSYRGTGGI-FEVCWN 547
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 209 (78.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T++GHT ++AI+W P S LL SCS D +K+W + K+ C+ H + + I +
Sbjct: 405 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM-KQEVCIHDLQAHNKEIYTIKW 462
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P S +L S S D V+LW++ + C T H++ V + F+
Sbjct: 463 SPTGPATSN-----PNSNIMLASASFDSTVRLWDI-ERGVCTHTLTKHQEPVYSVAFSPD 516
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T+SG + +
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVHSY 543
Score = 153 (58.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 46/146 (31%), Positives = 71/146 (48%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
SCS D + + + +R V+T+ GH TN ++AI+W P S LL SCS
Sbjct: 387 SCSTDMCIHVCRLGCDRP-VKTFQGH-------------TNEVNAIKWDP-SGMLLASCS 431
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG-------TNFI--SAGYDRYLKLW 463
D +K+W + K+ C+ H + + I ++ TG +N + SA +D ++LW
Sbjct: 432 DDMTLKIWSM-KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 490
Query: 464 DTESGECISRFTS-RKVAYCVKFHPD 488
D E G C T ++ Y V F PD
Sbjct: 491 DIERGVCTHTLTKHQEPVYSVAFSPD 516
Score = 119 (46.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 34/152 (22%), Positives = 63/152 (41%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P ++ GH + W P S LL S S D ++W + + T R +
Sbjct: 220 IPSSKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 278
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
R+ + ++++ W LL + S D ++W ++ T H+ + +
Sbjct: 279 REGGHDVPSNKDVTSLDWNTNGT-LLATGSYDGFARIWT--EDGNLASTLGQHKGPIFAL 335
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+N G +SAG D+ +WD +GE +F
Sbjct: 336 KWNRKGNYILSAGVDKTTIIWDAHTGEAKQQF 367
Score = 92 (37.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 512 PAVTSSPN-NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
PA TS+PN N LA S D+ + ++ + R T H Y S+ FSPD YL
Sbjct: 467 PA-TSNPNSNIMLASASFDSTVRLWD-IERGVCTH--TLTKHQEPVY--SVAFSPDGKYL 520
Query: 571 ISGDADGKC-YIWDWKTTKLFKKWKAHDGVCISTLWH 606
SG D KC +IW+ ++ L ++ G+ W+
Sbjct: 521 ASGSFD-KCVHIWNTQSGNLVHSYRGTGGI-FEVCWN 555
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 207 (77.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 400 SPTGPGTSN-----PNANLMLASASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVAFSPD 453
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T++G + +
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 165 (63.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG----- 448
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKWSPTGPGTSN 408
Query: 449 --TNFI--SAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
N + SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 43 (20.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 184 (69.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 56/225 (24%), Positives = 102/225 (45%)
Query: 360 VKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKL 419
+KLW+ ++ C+RT +GH D +N +S++ P H++ S S D +K+
Sbjct: 3 IKLWD-FQGFECIRTMHGH-----D---HN-----VSSVAIMPNGDHIV-SASRDKTIKM 47
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK- 478
WEV + CV+T+ GHR+ VR + N GT S D+ +++W + EC + +
Sbjct: 48 WEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 106
Query: 479 VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSAL 538
V C+ + P+ + + D + + + S L+C D + ++
Sbjct: 107 VVECISWAPESSYSSISEATGSEVGHDNWVRGV--LFHSGGKFILSCAD-DKTLRVWDYK 163
Query: 539 NRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
N+ + KT H + SLDF Y+++G D +W+
Sbjct: 164 NKRCM---KTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 156 (60.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH +S++ P H++ S S D +K+WEV + CV+T+ GHR+ VR +
Sbjct: 14 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 71
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVR-----TY-------- 432
N GT S ++ + + + +C+ +L E EH C+ +Y
Sbjct: 72 NQDGTLIASCSN--DQTVRVWVVATKECKAELRE--HEHVVECISWAPESSYSSISEATG 127
Query: 433 --YGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFH 486
GH VR + F++ G +S D+ L++WD ++ C+ + + + FH
Sbjct: 128 SEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 184
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 204 (76.9 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 74/289 (25%), Positives = 120/289 (41%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S L++S S D +K+W+ ++ RT GH AV+DI F+ TG
Sbjct: 114 FHPSFSLMVSASEDATIKVWD-FESGEFERTLKGHTNAVQDIDFDKTG------------ 160
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
+LL SCS D +KLW+ ++ + CV+T +GH V + F +G IS+ D+ +K+W
Sbjct: 161 --NLLASCSADLTIKLWD-FQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 464 DTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWL 523
+ +G CI H D ++ + + D IA + + + L
Sbjct: 218 EAATGYCIKTLVG---------HEDWVRK-ITVSEDGSCIASCSNDQTIKTWNIVKGECL 267
Query: 524 ACQSMDNKI---LIFSALNRFKL--NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGK 578
A + + L FS N + + T EG + YL +G D
Sbjct: 268 ATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKT 327
Query: 579 CYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
IW+ T + + HD + +HP K + + D T +V D
Sbjct: 328 IKIWELATGRCLATYIGHDNWVRAVRFHPC--GKFLLSVGDDKTIRVWD 374
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 86/320 (26%), Positives = 137/320 (42%)
Query: 323 LPKT-QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQA 381
LP+ + H GH I+++++ P S L++S S D +K+W+ ++ RT GH A
Sbjct: 93 LPRPPEKHILTGHRNCINSVKFHP-SFSLMVSASEDATIKVWD-FESGEFERTLKGHTNA 150
Query: 382 VRDICFNNTGTNFISA-----IR-W-FP-----KSAH---LLLSC-----SMD-----CR 416
V+DI F+ TG S I+ W F K+ H +SC S D R
Sbjct: 151 VQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSR 210
Query: 417 VKLWEVYKEHR--CVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
K +V++ C++T GH VR I + G+ S D+ +K W+ GEC++
Sbjct: 211 DKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLA-- 268
Query: 475 TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNK------WLACQSM 528
T R+ ++ V+ +DIP + ++ P S V P +LA S
Sbjct: 269 TYREHSHVVECLAFSTANIIDIPGSL--LSTPEGKSK--VKQGPGGNLVGQCGYLATGSR 324
Query: 529 DNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTK 588
D I I+ L T+ GH + ++ F P +L+S + D KT +
Sbjct: 325 DKTIKIWELATGRCL---ATYIGH--DNWVRAVRFHPCGKFLLS--------VGDDKTIR 371
Query: 589 LFKKWKAHDGVCISTLWHPH 608
+ W G CI T+ H
Sbjct: 372 V---WDIAQGRCIKTINEAH 388
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/177 (26%), Positives = 73/177 (41%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH + I + + SCS D +K W + K C+ TY H V + F
Sbjct: 225 IKTLVGHEDWVRKIT-VSEDGSCIASCSNDQTIKTWNIVKGE-CLATYREHSHVVECLAF 282
Query: 388 NNTGTNFI-----------SAIRWFPKSAHLLLSC------SMDCRVKLWEVYKEHRCVR 430
+ I S ++ P +L+ C S D +K+WE+ RC+
Sbjct: 283 STANIIDIPGSLLSTPEGKSKVKQGP-GGNLVGQCGYLATGSRDKTIKIWEL-ATGRCLA 340
Query: 431 TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY--CVKF 485
TY GH VR + F+ G +S G D+ +++WD G CI + C+ F
Sbjct: 341 TYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDF 397
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 206 (77.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 400 SPTGPGTNN-----PNANLMLASASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVAFSPD 453
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T++G + +
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 168 (64.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG--TN- 450
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG TN
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 451 ------FISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 206 (77.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 400 SPTGPGTNN-----PNANLMLASASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVAFSPD 453
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T++G + +
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 168 (64.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG--TN- 450
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG TN
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 451 ------FISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 206 (77.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 400 SPTGPGTNN-----PNANLMLASASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVAFSPD 453
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T++G + +
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 168 (64.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG--TN- 450
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG TN
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 451 ------FISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 206 (77.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H++ V + F+
Sbjct: 400 SPTGPGTNN-----PNANLMLASASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVAFSPD 453
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G S +D+ + +W+T++G + +
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 168 (64.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG--TN- 450
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG TN
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 451 ------FISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 207 (77.9 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 84/302 (27%), Positives = 131/302 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWEV +R C +
Sbjct: 310 VPTTAICVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVLGDR-C--------EPK 359
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 360 GSLSGSNAG---ITSIE-FDSAGSYLLAASNDFASRIWTV-DDNRLRHTLTGHSGKVLSA 414
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISR--FTSRK------VAYCVKF-HPDEDKQH 493
F +S +DR LKLWD S C + F CV H D+ +
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRF 474
Query: 494 LDIPVDMKYIADPTMHSMPAVT-SSPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEG 551
DI + + + A+ +S + L C S D+ + I ++ K+TF
Sbjct: 475 WDIRTESIVKELELLGRITALDLNSERTELLTC-SRDDLLKIID----LRVGAVKQTFSA 529
Query: 552 HMVAGYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-W 605
G+ C D FSPD +Y+ +G ADG Y+W+ T KL + H I+ + W
Sbjct: 530 Q---GFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAW 586
Query: 606 HP 607
P
Sbjct: 587 SP 588
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 208 (78.3 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 42/147 (28%), Positives = 78/147 (53%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P+ LL SCS D +K+W + ++R C H + + I +
Sbjct: 527 IKTFKGHTNEVNAIKWCPQG-QLLASCSDDMTLKIWSMNRDR-CCHDLQAHSKEIYTIKW 584
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ TG + P + +L S S D V+LW+V + C+ T H + V + F+
Sbjct: 585 SPTGPGTNN-----PNTNLILASASFDSTVRLWDV-ERGSCIHTLTKHTEPVYSVAFSPD 638
Query: 448 GTNFISAGYDRYLKLWDTESGECISRF 474
G + S +D+ + +W T++G+ + +
Sbjct: 639 GKHLASGSFDKCVHIWSTQTGQLVHSY 665
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 187 (70.9 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH I+ + + P ++ SCS D +K+W+ Y+ + RT GH AV DI + G
Sbjct: 104 GHRLPITRVIFHPLWT-IMASCSEDATIKVWD-YETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
L+SCS D +KLW+ + + C+++ GH V + F TG +
Sbjct: 162 Q--------------LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVL 207
Query: 453 SAGYDRYLKLWDTESGECISRF 474
SA D +K WD +G C+ F
Sbjct: 208 SASRDHTIKQWDISTGYCVYTF 229
Score = 185 (70.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T +GHT ++ I + L+SCS D +KLW+ + C+++ GH V + F
Sbjct: 143 TLKGHTDAVNDIA-IDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP 201
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
TG +F+ LS S D +K W++ + CV T+ GH VR I +N GT
Sbjct: 202 TG-DFV-------------LSASRDHTIKQWDISTGY-CVYTFRGHNDWVRMIRISNDGT 246
Query: 450 NFISAGYDRYLKLWD--TESGECISRFTSRKVAYCVKFHPD 488
F SA D+ + +W T+S + + R V CV++ PD
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLVLRDHEHAVE-CVEWAPD 286
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V+T+ GH + IR L S S+D V +W + + H AV + +
Sbjct: 226 VYTFRGHNDWVRMIR-ISNDGTLFASASLDQTVTVWS-FATKSAKLVLRDHEHAVECVEW 283
Query: 388 N-NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
+T ++ + S H+L S S D +K W + + T H VR + F+
Sbjct: 284 APDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNI-NTGDVLFTLLAHENWVRGLAFHP 342
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFH 486
G IS D+ L++W+ + C+ + + V FH
Sbjct: 343 KGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFH 383
Score = 63 (27.2 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 561 LDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
L F P YLIS D +W+ + K +AH+ + +H P V+T D
Sbjct: 338 LAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPF-VITGSVD 395
Score = 54 (24.1 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 21/99 (21%), Positives = 37/99 (37%)
Query: 570 LISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDAN 629
L SG D W+ T + AH+ +HP K + + D T +V + +
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPK--GKYLISVADDKTLRVWELS 362
Query: 630 IVKI--AVEMEKQVPQLYQFNQT--LTLSSIIQEICSGW 664
+ A+E + F+QT ++ + C W
Sbjct: 363 AQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 51 (23.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 518 PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADG 577
P K+L + D+K L L+ + K E H + ++ F ++I+G D
Sbjct: 342 PKGKYLISVA-DDKTLRVWELSAQRC--MKAIEAH--EHFVSTVAFHQTSPFVITGSVDM 396
Query: 578 KCYIWD 583
C +W+
Sbjct: 397 SCKVWE 402
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 201 (75.8 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 49 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 107
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 108 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 152
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 153 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISG 211
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 270
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 271 ERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Query: 600 CISTLWHPHEPSKVVTAGWD 619
+HP EP +++A D
Sbjct: 330 INEVAFHPDEPI-IISASSD 348
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 63/272 (23%), Positives = 114/272 (41%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T +GH+ + + + +L S S D V +W+ R V+ GH
Sbjct: 104 TLKGHSGAVMELH-YNTDGSMLFSASTDKTVAVWDSETGER-VKRLKGH----------- 150
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
T+F+++ + L+ + S D VKLW++ K+ ++T+ Q + + FN+T
Sbjct: 151 --TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQNTYQVLA-VTFNDTSD 206
Query: 450 NFISAGYDRYLKLWD--------TESG--ECISRFT-SRKVAYCVKFHPDEDKQHLDI-P 497
IS G D +K+WD T G + ++ + S + +Y + D + D+ P
Sbjct: 207 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 498 VDMKY----IADPTMHSMPA----VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
K I +H+ + SP+ +A S D + ++ +R L +
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK---L 323
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYI 581
GH AG + F PD +IS +D + Y+
Sbjct: 324 PGH--AGSINEVAFHPDEPIIISASSDKRLYM 353
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 206 (77.6 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 73/285 (25%), Positives = 124/285 (43%)
Query: 323 LPKTQVHTWE-----GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
L T + +W+ H+ +S++ S LL + DCRV +W V K C+ + G
Sbjct: 3 LTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPN-CIMSLTG 61
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV I FN++ ++ S+ ++LW++ + + +RT GH+
Sbjct: 62 HTSAVGCIQFNSSEERVVAG--------------SLSGSLRLWDL-EAAKILRTLMGHKA 106
Query: 438 AVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPD-------E 489
++ + F+ G S D +KLWD C+ R+ A C+ F PD
Sbjct: 107 SISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASAS 166
Query: 490 DKQHLDI--PVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNR 545
D + + + K I + T H+ + V PN LA S D + ++ L +F N
Sbjct: 167 DDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD-LEKF--NM 223
Query: 546 KKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLF 590
+ EG G S+ F+PD S L SG ++ ++ W+ + F
Sbjct: 224 IGSSEGE--TGVVRSVLFNPDGSCLYSG-SENTLRVYGWEPDRCF 265
Score = 167 (63.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISA 454
+S++ S LL + DCRV +W V K + C+ + GH AV I FN++ ++
Sbjct: 23 VSSLVLGKSSGRLLATGGEDCRVNIWAVSKPN-CIMSLTGHTSAVGCIQFNSSEERVVAG 81
Query: 455 GYDRYLKLWDTESGECISRFTSRKVAYC-VKFHPDED---KQHLDIPV---DMK-----Y 502
L+LWD E+ + + K + + FHP + +D + D++ +
Sbjct: 82 SLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVF 141
Query: 503 IADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLD 562
++ + SP+ KWLA S D+ + ++ + + F H A +
Sbjct: 142 RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE---FTSHTSAVNV--VQ 196
Query: 563 FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
F P+ L SG AD +WD + + + GV S L++P
Sbjct: 197 FHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP 241
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 50 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 108
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 109 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 153
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 154 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISG 212
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 271
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 272 ERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 330
Query: 600 CISTLWHPHEPSKVVTAGWD 619
+HP EP +++A D
Sbjct: 331 INEVAFHPDEPI-ILSASSD 349
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 50 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 108
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 109 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 153
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 154 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISG 212
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 271
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 272 ERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 330
Query: 600 CISTLWHPHEPSKVVTAGWD 619
+HP EP +++A D
Sbjct: 331 INEVAFHPDEPI-ILSASSD 349
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 103/453 (22%), Positives = 181/453 (39%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
K + W H I I W K LL+ S D +K+W+V +E +C GH V+
Sbjct: 118 KARFRDWIAHYNAIFDISWI-KGDSCLLTASGDQTIKVWDV-EENKCTGVLIGHTGTVKS 175
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+C + P ++ LL+S S D LW++ RC + H++ + C
Sbjct: 176 MCSH-------------PTNSDLLVSGSRDGCFALWDL----RCKSS--SHKE---EFCI 213
Query: 445 NNTGT---NFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE-----DKQHLDI 496
N+TG +S R + S + ++ PD D + L
Sbjct: 214 NSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIATAGAPDSALKFWDIRKLKA 273
Query: 497 P-VDMKYIADPT------MHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
P +DPT H + +++ + +L DN+I +++ L R ++F
Sbjct: 274 PFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTL-RLDKGPVQSF 332
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKK-WKAHDGVCISTLWHPH 608
G + + SPD Y++SG +DG YIW ++ K HD + W P
Sbjct: 333 SGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPS 392
Query: 609 EPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSD 668
E KV TA D T ++ NI E + N T ++S + + + + +
Sbjct: 393 EIGKVATAS-DDFTVRLW--NI-------ENNI--CTNANATASVSRVKRRVTALSNTEA 440
Query: 669 SEQYAL-QFSETNNKN--YITEKNRNEIKNGSVLRLAFSASK--TADDILSKLSDKNASL 723
E+ + + +E+ K+ ++ + N ++ ++R S K ++ LS LS + +
Sbjct: 441 KERLEMNRETESPQKHSSLSSDDDYNNDQSMPIIRTPESQKKKTSSSSSLSSLSSEEDII 500
Query: 724 EEKTAAEFYCICIVLLNKTWKEMRATTEDFVKV 756
E+T + +LN R T D+ V
Sbjct: 501 CERTPETTFNSPSSVLNPPSSVKRRTIRDYFLV 533
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 79/319 (24%), Positives = 128/319 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 49 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 107
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 108 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 152
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 153 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISG 211
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 270
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 271 ERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Query: 600 CISTLWHPHEPSKVVTAGW 618
+HP EP ++ G+
Sbjct: 330 INEVAFHPDEP--IIETGF 346
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 79/320 (24%), Positives = 129/320 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 50 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 108
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 109 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 153
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD + F + V F+ D+
Sbjct: 154 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISG 212
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 271
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 272 ERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGS 330
Query: 600 CISTLWHPHEPSKVVTAGWD 619
+HP EP +++A D
Sbjct: 331 INEVAFHPDEPI-ILSASSD 349
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 63/272 (23%), Positives = 114/272 (41%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T +GH+ + + + +L S S D V +W+ R V+ GH
Sbjct: 105 TLKGHSGAVMELH-YNTDGSMLFSASTDKTVAVWDSETGER-VKRLKGH----------- 151
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
T+F+++ + L+ + S D VKLW++ K+ V+T+ Q + + FN+T
Sbjct: 152 --TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAVQTFQNTYQVLA-VTFNDTSD 207
Query: 450 NFISAGYDRYLKLWD--------TESG--ECISRFT-SRKVAYCVKFHPDEDKQHLDI-P 497
IS G D +K+WD T G + ++ + S + +Y + D + D+ P
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 498 VDMKY----IADPTMHSMPA----VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
K I +H+ + SP+ +A S D + ++ +R L +
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK---L 324
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYI 581
GH AG + F PD ++S +D + Y+
Sbjct: 325 PGH--AGSINEVAFHPDEPIILSASSDKRLYM 354
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 196 (74.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 79/320 (24%), Positives = 129/320 (40%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P RC + + GH + ++ P + L S D + LW VY + T G
Sbjct: 50 PPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKG 108
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 109 HSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGHTS 153
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 154 FVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISG 212
Query: 493 --HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFAPK 271
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ + F+G+ V + +L +SPD S + +G AD Y+WD + ++ K H G
Sbjct: 272 ERCVRIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 330
Query: 600 CISTLWHPHEPSKVVTAGWD 619
+HP EP +++A D
Sbjct: 331 INEVAFHPDEPI-ILSASSD 349
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 196 (74.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 84/329 (25%), Positives = 133/329 (40%)
Query: 309 GTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE 368
G L+S PP RC + + GH + ++ P + L S D + LW VY +
Sbjct: 69 GALLQSG-PP-RCSSLQAPIMLLSGHEGEVYCCKFHPWG-NTLASAGFDRLILLWNVYGD 125
Query: 369 RRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC 428
T GH AV ++ +N G+ +L S S D V +W+ R
Sbjct: 126 CDNYATLKGHSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER- 170
Query: 429 VRTYYGHRQAVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFH 486
V+ GH V C+ G + G D +KLWD + F + V F+
Sbjct: 171 VKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFN 229
Query: 487 PDEDKQ-----HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIF 535
D+ DI V D++ Y S+ ++ S +L +MDN + I+
Sbjct: 230 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Query: 536 SALNRFKLNRK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLF 590
+ F + K F+G+ V + +L +SPD S + G AD Y+WD + ++
Sbjct: 290 D-VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRIL 347
Query: 591 KKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
K H G +HP EP +++A D
Sbjct: 348 YKLPGHAGSVNELAFHPEEPI-ILSASSD 375
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 194 (73.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 75/296 (25%), Positives = 120/296 (40%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
EGH I + P+ LLLS D ++ +W+VY++ V GH AV + F
Sbjct: 52 EGHEGEIFTAEFHPEG-ELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT--- 107
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
P +H+ +CS D + W++ R R + GH V + + G
Sbjct: 108 ----------PDGSHIF-TCSTDKTLAFWDIATGQR-QRRFKGHGNFVNSVQGSRRGQQL 155
Query: 452 ISAGYD-RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY-IAD---- 505
+ +G D R +K+WD S V F D +Q + +D + I D
Sbjct: 156 LCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFG-DTGEQVISGGIDNEVKIWDIRKQ 214
Query: 506 PTMHSM----PAVTS---SPNNKWLACQSMDNKILIFSALNRFKLNR-KKTFEGHMVAGY 557
+H + +T SP ++ +MDN + ++ R K F+GH +
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQ-HNF 273
Query: 558 ACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEP 610
+L +SP + SG AD YIWD T ++ K H+G + + P EP
Sbjct: 274 EKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEP 329
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 163 (62.4 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 402 PKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLK 461
P HLL SC +D +KLW+V K +C+RT +GH + V DI +N IS +D +K
Sbjct: 520 PYPTHLL-SCGLDNTIKLWDV-KTGKCIRTQFGHVEGVWDIAADNF--RIISGSHDGSIK 575
Query: 462 LWDTESGECISRFTSRKV 479
+WD +SG+C+ F R++
Sbjct: 576 VWDLQSGKCMHTFNGRRL 593
Score = 106 (42.4 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 53/197 (26%), Positives = 83/197 (42%)
Query: 407 LLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
+++S S D VK+W V E R T GH + V + + + S D +++WD
Sbjct: 394 VIVSGSADKTVKVWHV--ESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIR 451
Query: 467 SGECISRFTSRKVAYCVKFHP--DEDKQHL--DIPVDMKYIAD-PTMHSMPAVTSSPNNK 521
+ C+ F V K P +D ++L D D D PTM + +P+N+
Sbjct: 452 TNSCLKVFRGH-VGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNE 510
Query: 522 WLACQSMDNKI-----LIFSAL-NRFKLNRKKTFEGHMVA---GYACSL-DFSPDMSYLI 571
+D I L+ L N KL KT G + G+ + D + D +I
Sbjct: 511 QETV--LDENIPYPTHLLSCGLDNTIKLWDVKT--GKCIRTQFGHVEGVWDIAADNFRII 566
Query: 572 SGDADGKCYIWDWKTTK 588
SG DG +WD ++ K
Sbjct: 567 SGSHDGSIKVWDLQSGK 583
Score = 93 (37.8 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
+T GHT+ ++ ++ PKS SCS D +++W++ + C++ + GH V+ I
Sbjct: 415 YTLRGHTEWVNCVKLHPKSFSCF-SCSDDTTIRMWDI-RTNSCLKVFRGHVGQVQKI 469
Score = 70 (29.7 bits), Expect = 9.3e-10, Sum P(3) = 9.3e-10
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
GH+ G+ + + + L++ S+D +++W Y C+ TY GH +V +
Sbjct: 340 GHSDGVKTLYFDDRK---LITGSLDKTIRVWN-YITGECISTYRGHSDSVLSV 388
Score = 39 (18.8 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 5 QDYGGSSSESDAESQT 20
Q+ GSSS +D ++QT
Sbjct: 255 QNSTGSSSNADIQTQT 270
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 196 (74.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 78/305 (25%), Positives = 128/305 (41%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
+++T EGH + AI + + + S D KLW V + +C T+ GH + +
Sbjct: 126 ELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLS 184
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
FN P+S L+ + SMD KLW++ V T GH + + FN
Sbjct: 185 FN-------------PQST-LVATGSMDTTAKLWDIQNGEE-VYTLRGHSAEIISLSFNT 229
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYC-VKFHPD--------EDKQ-HLDI 496
+G I+ +D + +WD ++G ++ F+ D DK L
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289
Query: 497 PVDMKYIADPTMHSMPAVTS--SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
+ K +A T H + S K +A S D IFSA R K K EGH
Sbjct: 290 ATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR-KCIAK--LEGH-- 344
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
G + F+P ++L++G +D IWD +T + + + H S ++ ++ + V+
Sbjct: 345 EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVI 403
Query: 615 TAGWD 619
T D
Sbjct: 404 TGSKD 408
Score = 164 (62.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 63/266 (23%), Positives = 105/266 (39%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
HT+ GHT I + + P+S L+ + SMD KLW++ V T GH + + FN
Sbjct: 171 HTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGEE-VYTLRGHSAEIISLSFN 228
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
+G I+ S D V +W+ R V GH + FN
Sbjct: 229 TSGDRIITG--------------SFDHTVVVWDA-DTGRKVNILIGHCAEISSASFNWDC 273
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRK---VAYCVKFHPD-------EDKQHLDIPV 498
+ ++ D+ KLWD +G+C++ T + C + + +
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 499 DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
K IA H + ++ +P L S D I+ A L + EGH
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCL---QVLEGHTDEI 390
Query: 557 YACSLDFSPDMSYLISGDADGKCYIW 582
++C+ ++ ++ +I+G D C IW
Sbjct: 391 FSCAFNYKGNI--VITGSKDNTCRIW 414
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 54/207 (26%), Positives = 86/207 (41%)
Query: 435 HRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFH-PDEDK- 491
H + ++ N +G+ FI+ YDR KLWDT SGE ++ R V Y + F+ P DK
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 492 --QHLDIPVDMKYI-ADPTMHSMPAVTS-------SPNNKWLACQSMDNKILIFSALNRF 541
D + + H+ T+ +P + +A SMD ++ N
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 210
Query: 542 KLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCI 601
++ T GH + SL F+ +I+G D +WD T + H I
Sbjct: 211 EVY---TLRGH--SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE-I 264
Query: 602 STLWHPHEPSKVVTAGWDAATAKVQDA 628
S+ + S ++T D T K+ DA
Sbjct: 265 SSASFNWDCSLILTGSMDK-TCKLWDA 290
Score = 45 (20.9 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 12/57 (21%), Positives = 29/57 (50%)
Query: 22 HLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDVNTKEITKNLRYEELYAPEYG 78
H+ P+ + A + + S + + K+ ++++ ++NT E +N+ Y + YG
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 196 (74.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 45/151 (29%), Positives = 82/151 (54%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T++GHT ++AI+W P + +LL SCS D +K+W + K+ CV H + + I +
Sbjct: 342 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDSCVHDLQAHNKEIYTIKW 399
Query: 388 NNTGTNFISAIRWFPKSAHLLL----SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ TG + P +A+L+L S S D V+LW+V + C+ T H++ V +
Sbjct: 400 SPTGPGTNN-----P-NANLMLASLDSASFDSTVRLWDVDRGI-CIHTLTKHQEPVYSVA 452
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRF 474
F+ G S +D+ + +W+T++G + +
Sbjct: 453 FSPDGRYLASGSFDKCVHIWNTQTGALVHSY 483
Score = 159 (61.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 49/168 (29%), Positives = 81/168 (48%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H+ + W +S + SCS D + + ++ ++R ++T+ GH TN
Sbjct: 307 HSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRP-IKTFQGH-------------TN 350
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG--TN- 450
++AI+W P + +LL SCS D +K+W + K+ CV H + + I ++ TG TN
Sbjct: 351 EVNAIKWDP-TGNLLASCSDDMTLKIWSM-KQDSCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 451 ---------FISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPD 488
SA +D ++LWD + G CI T ++ Y V F PD
Sbjct: 409 PNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 456
Score = 119 (46.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/152 (23%), Positives = 63/152 (41%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P + GH + W P S LL S S D ++W + + T R +
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCI 215
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
R+ + ++++ W + LL + S D ++W K+ T H+ + +
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGT-LLATGSYDGFARIWT--KDGNLASTLGQHKGPIFAL 272
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+N G +SAG D+ +WD +GE +F
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQF 304
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 515 TSSPN-NKWLACQSMDNKILIFSALNRFKLNRK---KTFEGHMVAGYACSLDFSPDMSYL 570
T++PN N LA S+D+ S + + ++R T H Y S+ FSPD YL
Sbjct: 406 TNNPNANLMLA--SLDSASFD-STVRLWDVDRGICIHTLTKHQEPVY--SVAFSPDGRYL 460
Query: 571 ISGDADGKC-YIWDWKTTKLFKKWKAHDGVCISTLWH 606
SG D KC +IW+ +T L ++ G+ W+
Sbjct: 461 ASGSFD-KCVHIWNTQTGALVHSYRGTGGI-FEVCWN 495
Score = 43 (20.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 507 TMHSMP--AVTSSPNNKWLACQSMDNKILIFS 536
T H P +V SP+ ++LA S D + I++
Sbjct: 442 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 473
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 147 (56.8 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 47/169 (27%), Positives = 75/169 (44%)
Query: 328 VHTWEGHTKGISAIRWFPKSA-HL------LLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
VHT GH+ + AI + PK+ L L SC+ D VKLW + + V GH
Sbjct: 265 VHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEP-VADIEGH-- 321
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
++R ++ + W P L +C D +LW++ + + GH + V
Sbjct: 322 SMR-----------VARVMWHPSGRFLGTTC-YDHSWRLWDLEAQEEILHQE-GHSKGVY 368
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD 488
DI F+ G+ + G D + ++WD +G CI K Y + F P+
Sbjct: 369 DIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPN 417
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 72/280 (25%), Positives = 109/280 (38%)
Query: 333 GHTKGISAIRWFPKSAHLLLSC-SMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
G + +S + P S L +C S C KLW V + V T GH V I F+
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLC--KLWSV-PDCNLVHTLRGHSTNVGAIVFHPKA 284
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
T +S + K +L SC+ D VKLW + + V GH V + ++ +G
Sbjct: 285 T--VSLDK---KDVNLA-SCAADGSVKLWSLESDEP-VADIEGHSMRVARVMWHPSGRFL 337
Query: 452 ISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPDEDKQH---LDI--PV-DMK--- 501
+ YD +LWD E+ E I K Y + FH D LD V D++
Sbjct: 338 GTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGR 397
Query: 502 --YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYAC 559
+ + + + SPN +A S DN ++ R + T H
Sbjct: 398 CIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIY---TIPAHQ--NLVT 452
Query: 560 SLDFSPDM-SYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
+ F P+ ++L++G D IW K H+G
Sbjct: 453 GVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEG 492
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
EGH K I + + P H+ S D K+W++ ++R+C+ T H+
Sbjct: 403 EGHLKEIYGLNFSPNGYHVATG-SGDNTCKVWDL-RQRKCIYTIPAHQ------------ 448
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
N ++ +++ P + LL+ + D K+W + ++T GH V + + G
Sbjct: 449 -NLVTGVKFEPNHGNFLLTGAYDNTAKIW-THPGWSPLKTLAGHEGKVMGLDISLDGQLI 506
Query: 452 ISAGYDRYLKLWDTE 466
+ YDR KLW E
Sbjct: 507 ATCSYDRTFKLWTAE 521
Score = 99 (39.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHE 609
EGH+ Y L+FSP+ ++ +G D C +WD + K AH + + P+
Sbjct: 403 EGHLKEIYG--LNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNH 460
Query: 610 PSKVVTAGWDAATAKV 625
+ ++T +D TAK+
Sbjct: 461 GNFLLTGAYDN-TAKI 475
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 191 (72.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 84/318 (26%), Positives = 127/318 (39%)
Query: 318 PDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
P R + + GH + ++ P A L S D + +W VY + T G
Sbjct: 39 PPRSSSLQAPIMLLSGHEGEVYCCKFHPNGA-TLASSGYDRLILMWNVYGDCENYATLKG 97
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H AV ++ +N G+ LL S S D V +W+ R V+ GH
Sbjct: 98 HSGAVMELHYNTDGS--------------LLFSASTDKTVCVWDSETGER-VKRLKGHTS 142
Query: 438 AVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ--- 492
V CF G G D +KLWD + F + V F+ D+
Sbjct: 143 FVNS-CFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISG 201
Query: 493 --HLDIPV-DM---KYIADPTMH--SMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
DI V D+ K I H S+ ++ S + +L SMDN + ++ + F
Sbjct: 202 GIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD-IRPFAPK 260
Query: 545 RK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
+ K F+G+ V + +L +S D S + +G AD YIWD T ++ K H G
Sbjct: 261 ERCVKIFQGN-VHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGS 319
Query: 600 CISTLWHPHEPSKVVTAG 617
+HP EP +V +G
Sbjct: 320 VNEVAFHPEEP--IVLSG 335
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T +GH+ + + + LL S S D V +W+ R V+ GH
Sbjct: 94 TLKGHSGAVMELH-YNTDGSLLFSASTDKTVCVWDSETGER-VKRLKGH----------- 140
Query: 390 TGTNFISAIRWFPKSAHLLLSC--SMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
T+F+++ FP L+C S D VKLW++ K+ V T+ Q V + FN+T
Sbjct: 141 --TSFVNSC--FPARRGPQLACTGSDDGTVKLWDIRKK-ASVHTFQNTYQ-VLSVTFNDT 194
Query: 448 GTNFISAGYDRYLKLWDTES----------GECISRFT-SRKVAYCVKFHPDEDKQHLDI 496
IS G D +K+WD G+ ++ + S +Y + D + DI
Sbjct: 195 SDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Query: 497 -PVDMKY----IADPTMHSMPA----VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKK 547
P K I +H+ + S + +A S D + I+ R ++ K
Sbjct: 255 RPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTR-RIVYK- 312
Query: 548 TFEGHMVAGYACSLDFSPDMSYLISGDADGKCYI 581
GH AG + F P+ ++SG +D + YI
Sbjct: 313 -LPGH--AGSVNEVAFHPEEPIVLSGSSDKRLYI 343
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 198 (74.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 77/306 (25%), Positives = 130/306 (42%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
++HT EGH + AI + + + S D KLW V + +C T+ GH + +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLS 184
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
FN P+S L+ + SMD KLW++ V T GH + + FN
Sbjct: 185 FN-------------PQST-LVATGSMDTTAKLWDIQSGEE-VFTLTGHSAEIISLSFNT 229
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTSR--KVAYCVKFHPD--------EDKQ-HLD 495
+G I+ +D + +W+ ++G + +++ V F+ D DK L
Sbjct: 230 SGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV-FNWDCSLILTGSMDKTCKLW 288
Query: 496 IPVDMKYIADPTMHSMPAVTS--SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHM 553
V+ K +A T H + S K +A S D IFSA R + + EGH
Sbjct: 289 DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTK---LEGH- 344
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
G + F+P + L++G +D IWD +T + + + H S ++ ++ +
Sbjct: 345 -EGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGDII 402
Query: 614 VTAGWD 619
+T D
Sbjct: 403 ITGSKD 408
Score = 167 (63.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 63/266 (23%), Positives = 105/266 (39%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
HT+ GHT I + + P+S L+ + SMD KLW++ V T GH + + FN
Sbjct: 171 HTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQSGEE-VFTLTGHSAEIISLSFN 228
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
+G I+ S D V +WE R V T GH + FN
Sbjct: 229 TSGNRIITG--------------SFDHTVTVWEA-DTGRKVYTLIGHCAEISSAVFNWDC 273
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRK---VAYCVKFHPD-------EDKQHLDIPV 498
+ ++ D+ KLWD +G+C++ T + C + + +
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 499 DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
+ + H + ++ +P L S D I+ A L + EGH
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCL---QVLEGHTDEI 390
Query: 557 YACSLDFSPDMSYLISGDADGKCYIW 582
++C+ ++ D+ +I+G D C IW
Sbjct: 391 FSCAFNYKGDI--IITGSKDNTCRIW 414
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 76/318 (23%), Positives = 126/318 (39%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
KS ++ S D KLW+ + T GHR V I FNN + I+
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEE-LHTLEGHRNVVYAIAFNNPYGDKIA--------- 151
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDT 465
+ S D KLW V + +C T+ GH + + FN T + D KLWD
Sbjct: 152 ----TGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 466 ESGECISRFTSRKVAYC-VKFHPDEDK---QHLDIPVDMKYIADP-----TMHSMPAVTS 516
+SGE + T + F+ ++ D V + + AD T+ A S
Sbjct: 207 QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV-WEADTGRKVYTLIGHCAEIS 265
Query: 517 SPNNKW----LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLIS 572
S W + SMD ++ A+N + T GH D++ + + +
Sbjct: 266 SAVFNWDCSLILTGSMDKTCKLWDAVNGKCV---ATLTGHDDEILDSCFDYTGKL--IAT 320
Query: 573 GDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVK 632
ADG I+ T + K + H+G ++P + ++++T D TA++ DA +
Sbjct: 321 ASADGTARIFSAATRECVTKLEGHEGEISKISFNP-QGNRLLTGSSDK-TARIWDAQTGQ 378
Query: 633 IAVEMEKQVPQLYQ--FN 648
+E +++ FN
Sbjct: 379 CLQVLEGHTDEIFSCAFN 396
Score = 40 (19.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 22 HLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDVNTKEITKNLRYEELYAPEYG 78
H+ P+ + A + + S + + K+ ++++ +++T E +N+ Y + YG
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 208 (78.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 82/321 (25%), Positives = 145/321 (45%)
Query: 281 PLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISA 340
P+ E L +KD D + + D + ++ + LP ++T+ ++
Sbjct: 411 PVRESLPLPLKDANDI--KKMIIQVEDSRSKIKLGAI--QASLPSVCMYTFHNTNNNMTC 466
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVY-KERRCV--RTYYGHRQAVRDICFNNTGTNFISA 397
I F + L+ + D +KLW + K + V R + ++ R + ++G +
Sbjct: 467 IE-FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKL-IGHSGP--VYG 522
Query: 398 IRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYD 457
+ + P + +LL SCS D V+LW + + + +Y GH Q V D+ F+ G F++A +D
Sbjct: 523 VSFSPDNKYLL-SCSEDKTVRLWSL-DTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHD 580
Query: 458 RYLKLWDTESGECISRFTSR-KVAYCVKFHPDE--------DK--QHLDIPVD--MKYIA 504
+ +LW T+ + F CV+FHP+ DK + D+ ++
Sbjct: 581 QTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFL 640
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
T +S+ + SP+ +WLA D I ++ + +L K+ GH A SL FS
Sbjct: 641 GHT-NSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRL---KSMRGHARASLY-SLAFS 695
Query: 565 PDMSYLISGDADGKCYIWDWK 585
D + L+SG AD +WD K
Sbjct: 696 RDGTVLVSGCADNSVRVWDVK 716
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 130 ESKVIGASTSGDKNKTVFESTS 151
ESK + + GDK++T EST+
Sbjct: 4 ESKQLQGNKDGDKHQTQ-ESTN 24
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 197 ESKVIGASMSGDKNKTVFESTS 218
ESK + + GDK++T EST+
Sbjct: 4 ESKQLQGNKDGDKHQTQ-ESTN 24
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 78/351 (22%), Positives = 143/351 (40%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVR-TYYGHRQAVR 383
+T +HT +GH + + W P ++ + SMD ++LW+ K +C+ GH + +
Sbjct: 176 QTPMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDP-KSGQCLGDALRGHSKWIT 233
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ + I ++ P S L S S D +K+W+ C T GH +V +
Sbjct: 234 SLSWEP-----IHLVK--PGSKPRLASSSKDGTIKIWDTVSRV-CQYTMSGHTNSVSCVK 285
Query: 444 FNNTGTNFISAGYDRYLKLWDTES-GECISRFTSR---------KVAYCVKFHP-DEDKQ 492
+ G + S +DR +++WD S G CI+ S Y ++ D +
Sbjct: 286 WGGQGLLY-SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGK 344
Query: 493 HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
P + + A + + + + + S D + +++ L K + T
Sbjct: 345 KPSTPEEAQKKALENYEKI-CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQK 403
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSK 612
+V A FSPD Y++S D +WD + K ++ H W +
Sbjct: 404 LVNHVA----FSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSS-DCRL 458
Query: 613 VVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSG 663
+V+ D T KV D K++V++ ++Y T+ S + +CSG
Sbjct: 459 LVSCSKDT-TLKVWDVRTRKLSVDLPGHKDEVY----TVDWSVDGKRVCSG 504
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 74/283 (26%), Positives = 120/283 (42%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
T +GH +G+S + + + + LL SCS D +KLW+ K+ +RT GH +V
Sbjct: 151 TLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSV------ 204
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQA-VRDICFNNT 447
S++R+ + + L+S S D +++W+V CV+ ++ +RD+ +
Sbjct: 205 -------SSVRFLTSNDNHLISASRDGTLRIWDVSTGF-CVKVIKSATESWIRDVSPSFD 256
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADP 506
G +S G D+ + +W+ S E + + C F P +HL +K P
Sbjct: 257 GKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLK---KP 313
Query: 507 TMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPD 566
P TSS +++A + D I ++ A R KT GH + L F P
Sbjct: 314 -----PPATSSC--EFVATGARDKTIKLWEARGRLI----KTLHGH--DNWVRGLVFHPG 360
Query: 567 MSYLISGDADGKCYIWDWKTT-KLFKKWK-AHDGVCISTLWHP 607
YL S D WD +L K AH+ W P
Sbjct: 361 GKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAP 403
Score = 180 (68.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/175 (28%), Positives = 79/175 (45%)
Query: 322 FLPK-TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
+LPK + HT H ++ + + P L S S DC +K+W+ ++ RT GH +
Sbjct: 100 WLPKPSSTHTLTSHRDAVTCVAFHPVFTSLA-SGSEDCTIKIWD-WELGEIERTLKGHIR 157
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
V + + K LL SCS D +KLW+ K++ +RT GH +V
Sbjct: 158 GVSGLDYGGQ------------KGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVS 205
Query: 441 DICFNNTGTN-FISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL 494
+ F + N ISA D L++WD +G C+ S ++ P D + L
Sbjct: 206 SVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWL 260
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 74/283 (26%), Positives = 120/283 (42%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
T +GH +G+S + + + + LL SCS D +KLW+ K+ +RT GH +V
Sbjct: 151 TLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSV------ 204
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQA-VRDICFNNT 447
S++R+ + + L+S S D +++W+V CV+ ++ +RD+ +
Sbjct: 205 -------SSVRFLTSNDNHLISASRDGTLRIWDVSTGF-CVKVIKSATESWIRDVSPSFD 256
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKYIADP 506
G +S G D+ + +W+ S E + + C F P +HL +K P
Sbjct: 257 GKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLK---KP 313
Query: 507 TMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPD 566
P TSS +++A + D I ++ A R KT GH + L F P
Sbjct: 314 -----PPATSSC--EFVATGARDKTIKLWEARGRLI----KTLHGH--DNWVRGLVFHPG 360
Query: 567 MSYLISGDADGKCYIWDWKTT-KLFKKWK-AHDGVCISTLWHP 607
YL S D WD +L K AH+ W P
Sbjct: 361 GKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAP 403
Score = 180 (68.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/175 (28%), Positives = 79/175 (45%)
Query: 322 FLPK-TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
+LPK + HT H ++ + + P L S S DC +K+W+ ++ RT GH +
Sbjct: 100 WLPKPSSTHTLTSHRDAVTCVAFHPVFTSLA-SGSEDCTIKIWD-WELGEIERTLKGHIR 157
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
V + + K LL SCS D +KLW+ K++ +RT GH +V
Sbjct: 158 GVSGLDYGGQ------------KGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVS 205
Query: 441 DICFNNTGTN-FISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL 494
+ F + N ISA D L++WD +G C+ S ++ P D + L
Sbjct: 206 SVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWL 260
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 143 (55.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
NNT T + +P H L S ++D +KLW+V +C+RT +GH + V I +
Sbjct: 625 NNTATTATTP-NSYP--THFLTS-ALDNTIKLWDV-ATGKCIRTQFGHIEGVWSIAADTF 679
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCV 483
IS +DR +K+WD ++G+C+ F++ CV
Sbjct: 680 --RIISGAHDRLIKVWDLQNGKCLHTFSNNSSVSCV 713
Score = 104 (41.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
V T GHTKG+ A+ + + L+S +D +K+W Y +C+ TY GH AV + F
Sbjct: 416 VKTLTGHTKGVRALVFDNQK---LISGGLDSTIKVWN-YHTGQCIATYRGHEDAVVSVDF 471
Query: 388 NN 389
N
Sbjct: 472 TN 473
Score = 104 (41.7 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
L+S +D +K+W Y +C+ TY GH AV + F N + +S D +++W +S
Sbjct: 436 LISGGLDSTIKVWN-YHTGQCIATYRGHEDAVVSVDFTNK--SIVSGSADHTVRVWHVDS 492
Query: 468 GEC 470
C
Sbjct: 493 RTC 495
Score = 97 (39.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T+ GH+ G++ +++ K L++ S D +K+W++ CV+T GH + VR + F
Sbjct: 376 IKTFTGHSDGVTCLQFNRK---YLMTGSYDTTIKIWKI-DSGECVKTLTGHTKGVRALVF 431
Query: 388 NN 389
+N
Sbjct: 432 DN 433
Score = 94 (38.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
++S S D V++W V + R T GH V + ++ SA D +++WD S
Sbjct: 476 IVSGSADHTVRVWHV--DSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNS 533
Query: 468 GECISRF 474
ECI F
Sbjct: 534 NECIKVF 540
Score = 62 (26.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/49 (20%), Positives = 27/49 (55%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
+T GHT ++ ++ +++ + S S D +++W++ C++ + G
Sbjct: 496 YTLRGHTDWVNHVK-IHSASNTIFSASDDTTIRMWDM-NSNECIKVFGG 542
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 21/99 (21%), Positives = 42/99 (42%)
Query: 506 PTMHSMPAVTSSPNN--KWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDF 563
P+ ++ ++PN+ ++DN I ++ K R + F GH+ ++
Sbjct: 622 PSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATG-KCIRTQ-F-GHIEGVWS----I 674
Query: 564 SPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV-CI 601
+ D +ISG D +WD + K + + V C+
Sbjct: 675 AADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSSVSCV 713
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 588 KLFKKWKAHDGVCIST 603
+L K W +G C+ T
Sbjct: 688 RLIKVWDLQNGKCLHT 703
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 80/339 (23%), Positives = 136/339 (40%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T + T +GHT +S + W P A ++ + SMD ++ W+ K H + +
Sbjct: 167 QTPIATMKGHTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMA 225
Query: 385 ICFNNTGTNFISAIRWFPKSA-HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+C+ + P S +LL S S D V++W V K + T GH + C
Sbjct: 226 LCWQ--------PLHLAPDSGPYLLASGSKDNTVRIWNV-KLRTLLFTLSGHTAPIT--C 274
Query: 444 FNNTGTNFI-SAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
G N+I S+ YD+ +++WD + G+C+ + +K H HL + +
Sbjct: 275 VRWGGQNWIYSSSYDKTIRIWDAKDGKCL---------HILKGHAAR-VNHLSLSTEHVL 324
Query: 503 IADPTMHS--MPAVTSSPNNK----WLACQSMDNKILIFSALNRFKL----NRKKT---- 548
+ H+ P S K + AC + L+ SA + +L +K T
Sbjct: 325 RSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLV-SASDDLQLILWDPQKSTKPIT 383
Query: 549 -FEGHM-VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWH 606
GH V +A FSPD + + D +WD KT K + H W
Sbjct: 384 KMHGHQKVVNHA---SFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWS 440
Query: 607 PHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
S+++ + T KV D K+ ++ Q++
Sbjct: 441 TD--SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVF 477
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 76/307 (24%), Positives = 123/307 (40%)
Query: 334 HTKGISAIRWFP------KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
HTK I A+ W P +LL S S D V++W V K R + T GH
Sbjct: 219 HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNV-KLRTLLFTLSGH--------- 268
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
T I+ +RW + + S S D +++W+ K+ +C+ GH V + + T
Sbjct: 269 ----TAPITCVRW--GGQNWIYSSSYDKTIRIWDA-KDGKCLHILKGHAARVNHLSLS-T 320
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIA-DP 506
S YD + S E R + C+K ++ + D++ I DP
Sbjct: 321 EHVLRSGAYDHTDFKPKSFSDE--RRKAKERYEACLK---QSGERLVSASDDLQLILWDP 375
Query: 507 T--------MHSMPAVTS----SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
MH V + SP+ + +A S D+ + ++ L T GH+
Sbjct: 376 QKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFL---ATLRGHVA 432
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
A Y C+ +S D L+S D +WD ++ K+ H+ + W P + +V
Sbjct: 433 AVYQCA--WSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP-DGQRVA 489
Query: 615 TAGWDAA 621
+ G D A
Sbjct: 490 SGGADKA 496
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 70/273 (25%), Positives = 113/273 (41%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T + T GHT I+ +RW + + S S D +++W+ K+ +C+ GH A R
Sbjct: 259 RTLLFTLSGHTAPITCVRW--GGQNWIYSSSYDKTIRIWDA-KDGKCLHILKGH--AAR- 312
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMD-CRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
N +S + H+L S + D K E R + Y + C
Sbjct: 313 -------VNHLSL-----STEHVLRSGAYDHTDFKPKSFSDERRKAKERY-------EAC 353
Query: 444 FNNTGTNFISAGYDRYLKLWDTE-SGECISRFTS-RKVAYCVKFHPDED---KQHLDIPV 498
+G +SA D L LWD + S + I++ +KV F PD D V
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 499 DM------KYIADPTMHSMPAVTS---SPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
+ K++A H + AV S +++ L S D + ++ ++ K+ K
Sbjct: 414 RLWDGKTGKFLATLRGH-VAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK-KM--KFDL 469
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH +A +D+SPD + SG AD IW
Sbjct: 470 PGHEDQVFA--VDWSPDGQRVASGGADKAVRIW 500
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 189 (71.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 74/271 (27%), Positives = 115/271 (42%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ +++ P SAHLL S S D V+LW + V + H +VR
Sbjct: 49 PQSRAYRFTGHKDAVTCVQFSP-SAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVR 106
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+CF+ G + LL+ S D +KLW V+++ + + T H VR
Sbjct: 107 SVCFSADGQS--------------LLTASDDQSIKLWSVHRQ-KIICTLREHNNWVRCAR 151
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDED---KQHLDIPVD 499
F+ G +S DR +KLWD S + I F + V FHP D V
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVR 211
Query: 500 MKYIADPTM------HS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ I T+ HS + A++ P+ L S D+ + I L L T G
Sbjct: 212 VWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLY---TLHG 268
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
H G A + FS S +D + +W
Sbjct: 269 HQ--GSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 76/293 (25%), Positives = 124/293 (42%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
T ++GH I+++ + P S + S S+D V +W + + R R + GH+ AV
Sbjct: 9 TLERNFKGHRDAITSLDFSP-SGKQIASGSVDASVMVWNMKPQSRAYR-FTGHKDAVT-- 64
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN 445
C F SAHLL S S D V+LW + V + H +VR +CF+
Sbjct: 65 CVQ------------FSPSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFS 111
Query: 446 NTGTNFISAGYDRYLKLWDTESGE--CISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY- 502
G + ++A D+ +KLW + C R + V C +F PD + + D
Sbjct: 112 ADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVR-CARFSPDGQLM-VSVSDDRTVK 169
Query: 503 IADPT----MHSM--PAVTSS-----PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D + +H+ P SS P++ +A S DN + ++ L ++
Sbjct: 170 LWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQH---YQV 226
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV--CIS 602
H A A L F P ++L++ +D I D +L H G C+S
Sbjct: 227 HSAAVNA--LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVS 277
Score = 160 (61.4 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 62/264 (23%), Positives = 114/264 (43%)
Query: 373 RTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTY 432
R + GHR A+ + F+ +G S S+D V +W + + R R +
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASG--------------SVDASVMVWNMKPQSRAYR-F 56
Query: 433 YGHRQAVRDICFNNTGTNFISAGYDRYLKLW-DTESGECISRFTSRKVAYCVKFHPDEDK 491
GH+ AV + F+ + S+ D+ ++LW + GE + V F D
Sbjct: 57 TGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCF--SADG 114
Query: 492 QHLDIPVDMKYIADPTMHSMPAV-TSSPNNKWLACQ--SMDNKILIFSALNR-FKL---- 543
Q L D + I ++H + T +N W+ C S D ++++ + +R KL
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 544 NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCIST 603
+R+ GY+ +DF P + + + +D +WD +T L + ++ H +
Sbjct: 175 SRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL 234
Query: 604 LWHPHEPSKVVTAGWDAATAKVQD 627
+HP + ++TA D+ T K+ D
Sbjct: 235 SFHP-SGNHLLTASSDS-TLKILD 256
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 148 (57.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+P T + ++ H ++A+++ P S LL + MD RVKLWE + ++ C + G
Sbjct: 291 VPTTASYVFDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEAFGDK-C--EFKG----- 341
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
+ +N G I++I F + LL+ S D ++W V ++R T GH V
Sbjct: 342 -SLSGSNAG---ITSIE-FDSAGAYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSA 395
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGEC 470
F +S +DR LKLWD S C
Sbjct: 396 KFLLDNARIVSGSHDRTLKLWDLRSKVC 423
Score = 93 (37.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 556 GYACSLD-----FSPDMSYLISGDADGKCYIWDWKTTKLFKKW-KAHDGVCISTLWHP 607
G+ C D FSPD SY+ +G ADG Y+W T K+ K K H + W P
Sbjct: 528 GFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 585
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 183 (69.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 71/272 (26%), Positives = 118/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVR 107
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G LL++ S D VK+W +++ R + + H VR
Sbjct: 108 SVHFCSDG--------------QLLVTASDDKTVKVWSTHRQ-RFLFSLTQHINWVRCAK 152
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY-VDFHPSGTCIAAAGMDNTV 211
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + A++ P+ +L S D+ + I + L T
Sbjct: 212 KVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLY---TLH 268
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 269 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 70/287 (24%), Positives = 112/287 (39%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P + H ++GH ++ + + + HL S SMD + +W + + R R + GH+ AV
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLA-SGSMDSTLMIWHMKPQSRAYR-FTGHKDAVT 65
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
C N F S HLL S S D V++W + + H VR +
Sbjct: 66 --CVN------------FSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVH 110
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------EDKQ-H 493
F + G ++A D+ +K+W T + T C KF PD +DK
Sbjct: 111 FCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 494 LDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
L + + H + V P+ +A MDN + ++ + ++
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQH---YQL 227
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
H A A L F P +YLI+ +D I D +L H G
Sbjct: 228 HSAAVNA--LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/233 (24%), Positives = 105/233 (45%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW-DTE 466
L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +++W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 467 SGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNN-K 521
GE + R T R V +C D Q L D K + + H + S +
Sbjct: 93 KGESTVFRAHTATVRSVHFC------SDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHIN 146
Query: 522 WLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDMSYLISGD 574
W+ C S D ++++ ++ ++ KL K + E H G+ +DF P + + +
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
D +WD +T +L + ++ H + +HP + ++TA D+ T K+ D
Sbjct: 207 MDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP-SGNYLITASSDS-TLKILD 257
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 191 (72.3 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 610
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 611 RLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 671 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 725
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 726 ILASGSMDNTVRLWD--AVKAFEDLETDD 752
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 578
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 579 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 623
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V F+ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 624 FAGHLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 683 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
Query: 538 LNRFK 542
+ F+
Sbjct: 742 VKAFE 746
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 188 (71.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 58/195 (29%), Positives = 88/195 (45%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 311 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 369
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 370 RLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 429
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 430 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 484
Query: 569 YLISGDADGKCYIWD 583
L SG D +WD
Sbjct: 485 ILASGSMDNTVRLWD 499
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 337
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 338 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 382
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V F+ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 383 FAGHLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 441
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 442 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 500
Query: 538 LNRFK 542
+ F+
Sbjct: 501 VKAFE 505
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 190 (71.9 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 549 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 607
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 608 RLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 667
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 668 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 722
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 723 ILASGSMDNTVRLWD--AIKAFEDLETDD 749
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 575
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 576 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 620
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V F+ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 621 FAGHLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 680 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 738
Query: 538 LNRFK 542
+ F+
Sbjct: 739 IKAFE 743
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 190 (71.9 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 609
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 610 RLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 670 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 724
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 725 ILASGSMDNTVRLWD--AIKAFEDLETDD 751
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 577
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 578 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 622
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V F+ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 623 FAGHLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 682 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
Query: 538 LNRFK 542
+ F+
Sbjct: 741 IKAFE 745
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 190 (71.9 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 609
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 610 RLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 670 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 724
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 725 ILASGSMDNTVRLWD--AVKAFEDVETDD 751
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 577
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 578 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 622
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V F+ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 623 FAGHLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 682 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
Query: 538 LNRFK 542
+ F+
Sbjct: 741 VKAFE 745
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 173 (66.0 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 298 GRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMD 357
GR D T++ + + F T V + EGHT + ++ W + LL +CS D
Sbjct: 81 GRFLAGASFDASTSIWEKSKDELEF---THVSSLEGHTYEVKSVAW-DSTGTLLATCSRD 136
Query: 358 CRVKLWEVYKER--RCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDC 415
+ +W++ + C+ GH Q ++ C + W P LL S S D
Sbjct: 137 KSIWIWQMEDDNDFECLSINSGHGQDIK--C-----------VLWHPNE-ELLASSSYDD 182
Query: 416 RVKLW-EVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW--DTESGECIS 472
+K W ++ + C+ T GH ++ D+ FN G +S G D+ + W D E+ + I+
Sbjct: 183 TIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWIN 242
Query: 473 RF 474
F
Sbjct: 243 IF 244
Score = 153 (58.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/172 (25%), Positives = 76/172 (44%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER---RCVRTYYGHRQAVRD 384
V + EGH K + + W P L S D +WE K+ V + GH V+
Sbjct: 62 VQSLEGHEKTVRRVAWSP-CGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKS 120
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVRTYYGHRQAVRDI 442
+ +++TGT LL +CS D + +W++ ++ C+ GH Q ++ +
Sbjct: 121 VAWDSTGT--------------LLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCV 166
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESG--ECISRFTSRKVA-YCVKFHPDEDK 491
++ S+ YD +K W G ECI+ T + + + + F+ D DK
Sbjct: 167 LWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDK 218
Score = 54 (24.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 560 SLDFSPDMSYLISGDADGKCYIWDWKTTK-------LFKKWKAHDGVCISTLWHPHEPSK 612
S+D+S + +++G AD ++ ++ + KK AHD T W+P +
Sbjct: 256 SIDWSSLTNTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNI 315
Query: 613 VVTAGWD 619
+ + G D
Sbjct: 316 LASCGDD 322
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 189 (71.6 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLSCS D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 531 FSPDRNYLLSCSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 589
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 590 RLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHK 649
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++ SPN ++LA + D ++L++ + + K GH YA L FS D
Sbjct: 650 GPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GHTDTIYA--LRFSRDGE 704
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 705 ILASGSMDNTVRLWD--AVKAFEDLETDD 731
Score = 135 (52.6 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 63/244 (25%), Positives = 104/244 (42%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLSCS D V+LW + + C
Sbjct: 500 SDDVLERIMDEKTASELKILYGHSGPVYGTSFSP-DRNYLLSCSEDGTVRLWSL-QTFTC 557
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 558 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 602
Query: 432 YYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPD-- 488
+ GH V F+ + DR ++LWD +G C+ FT K + + F P+
Sbjct: 603 FAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGR 662
Query: 489 ------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSAL 538
D + L DI + + + H+ + A+ S + + LA SMDN + ++ A+
Sbjct: 663 FLATGATDGRVLLWDIGHGLM-VGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAV 721
Query: 539 NRFK 542
F+
Sbjct: 722 KAFE 725
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 182 (69.1 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 69/303 (22%), Positives = 123/303 (40%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH+ + A+R+ P + H+ S SMD + LW Y + GH+ A+ D+
Sbjct: 64 GHSGEVFAVRFDPTAQHIA-SGSMDRSILLWNTYGQCENYGILSGHKGAILDL------- 115
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF- 451
+W + + + S S D + W++ R +R Y GH + + + + G
Sbjct: 116 ------QW-SRDSKTIFSASADMTLASWDIESGQR-IRRYIGHEEVINSVEISKRGQEML 167
Query: 452 ISAGYDRYLKLWDTESGECISRF-TSRKVAYCVKFHPDED--KQHLDIPVDM-----KYI 503
+SA D + +WD E I T + + + +D + + K I
Sbjct: 168 VSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAI 227
Query: 504 ADPTMHSMPAVTS---SPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGYAC 559
M +TS SP+++ L S D+ + + NR +T++G V G
Sbjct: 228 VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPV-GLEK 286
Query: 560 SL---DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
+L ++P + +G D +WD+KT K+ K H G + P+ +V+A
Sbjct: 287 NLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSA 346
Query: 617 GWD 619
D
Sbjct: 347 SSD 349
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISA 454
+ A+R+ P + H+ S SMD + LW Y + GH+ A+ D+ ++ SA
Sbjct: 69 VFAVRFDPTAQHIA-SGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSA 127
Query: 455 GYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDEDKQHLDIPVDMKY-IADPTM-HSM 511
D L WD ESG+ I R+ + V V+ + + D I DP ++
Sbjct: 128 SADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAI 187
Query: 512 PAVTSSPNNKWLACQSMDNKIL---IFSALNRFKLNRKK---TFEGHMVAGYACSLDFSP 565
+ + +A N++ I +A++ + + +K + GHM SL+ SP
Sbjct: 188 DYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDT--ITSLEVSP 245
Query: 566 DMSYLISGDADGKCYIWDWKT-TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAK 624
D L+S D WD + + + +DG + ++ A W+ A K
Sbjct: 246 DSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGL------EKNLIRASWNPAGDK 299
Query: 625 V 625
+
Sbjct: 300 I 300
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 138 (53.6 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 47/195 (24%), Positives = 87/195 (44%)
Query: 282 LEEKTILHIKDPTDYQG-RSFLHPPHD--VGTNLRSDTPPDRCFLPKTQVHTWEG-HTKG 337
+E +LH + D + SF+ P D + T R+ + V TW+ H
Sbjct: 53 VETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAP 112
Query: 338 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISA 397
++ + F ++ LL + D +K+W++ K+ C G ++G +
Sbjct: 113 VATMV-FDSTSTLLATGGCDSTIKIWDMIKQY-CTHNLKG-----------SSGV--VHL 157
Query: 398 IRWFPKSAHL-LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGY 456
+ + P + L L S SMD ++++W++ +CV GH AV + F G IS+G
Sbjct: 158 VEFHPDISRLQLFSSSMDYKIRIWDL-NSSKCVAVLDGHFSAVTSLAFTADGNTLISSGR 216
Query: 457 DRYLKLWDTESGECI 471
D+ +W+ ++ E I
Sbjct: 217 DKICMVWNLKTRESI 231
Score = 124 (48.7 bits), Expect = 0.00085, P = 0.00085
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 407 LLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
+L + S D +KLW + ++ C++T+ GH +V I F + GT +S G D LKLW +
Sbjct: 546 ILATSSADGTLKLWGL-QDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIK 604
Query: 467 SGECI 471
+ EC+
Sbjct: 605 TNECV 609
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 407 LLLSCSMDCRVKLWEVYKEHRCVRTYYG-HRQAVRDICFNNTGTNFISAGYDRYLKLWDT 465
+L++ S +K W ++E+RCVRT+ H V + F++T T + G D +K+WD
Sbjct: 81 VLVTGSRALLLKQWN-WRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDM 139
Query: 466 ESGECISRFT-SRKVAYCVKFHPDEDKQHL 494
C S V + V+FHPD + L
Sbjct: 140 IKQYCTHNLKGSSGVVHLVEFHPDISRLQL 169
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Query: 305 PHDVGTNLRSDTPPDRCF-LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLW 363
P D + +++P + F L + GHT+ I A+ F K + +SC+ D +++W
Sbjct: 355 PGDSHIVVATNSPQLKVFELSTSHCQILYGHTETILALDVFRKGL-MFVSCAKDKSIRVW 413
Query: 364 EVYKERR--CVRTYYGHRQAVRDICFNNTGTNFI--SAIRWFPKSAHLLLSCSMDCRVKL 419
+ K+ R CV GH V + + +F+ S+ K ++ S + + L
Sbjct: 414 RMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAAL 473
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKV 479
+ T GH + + + + + DR KLW + FT K
Sbjct: 474 ISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKR 533
Query: 480 A-YCVKFHP 487
+CV+F P
Sbjct: 534 GIWCVQFSP 542
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 30/144 (20%), Positives = 61/144 (42%)
Query: 329 HTWEGHTKGISAIRWFPKSAHL-LLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
H +G + + + + P + L L S SMD ++++W++ +CV GH AV + F
Sbjct: 146 HNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDL-NSSKCVAVLDGHFSAVTSLAF 204
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
G IS+ R ++ + ++ +Y+ + +
Sbjct: 205 TADGNTLISSGR---DKICMVWNLKTRESIRTIPIYESVEAA-VLLPEQGDFSQLGVKKQ 260
Query: 448 GTNFISAGYDRYLKLWDTESGECI 471
G +F++AG LK+W+ + C+
Sbjct: 261 GLHFLTAGSKGVLKVWEVATAACV 284
Score = 103 (41.3 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
V SP ++ LA S D + ++ L F KTFEGH + + F + L+SG
Sbjct: 538 VQFSPVDQILATSSADGTLKLWG-LQDFSC--LKTFEGHDAS--VLKIIFVSRGTQLLSG 592
Query: 574 DADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH---EPSKVVTAGWDAATAKVQDANI 630
+DG +W KT + K H+ +W H + VVTA D++ +D +
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHE----DKIWGLHTNKQDDMVVTASSDSSITLWKD--V 646
Query: 631 VKIAVEMEKQVPQLYQFNQTLTLSSIIQE 659
+I E E Q + Q + LS+++ E
Sbjct: 647 TEIEQE-EAQAKREEQIMKEQELSNLLHE 674
Score = 100 (40.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYG-HRQAVRDICFNNTGTNFISAIRWFPKSAHLL 408
+L++ S +K W ++E RCVRT+ H V + F++T T LL
Sbjct: 81 VLVTGSRALLLKQWN-WRENRCVRTWKAVHIAPVATMVFDSTST--------------LL 125
Query: 409 LSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN--TGTNFISAGYDRYLKLWDTE 466
+ D +K+W++ K++ C G V + F+ + S+ D +++WD
Sbjct: 126 ATGGCDSTIKIWDMIKQY-CTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLN 184
Query: 467 SGECIS 472
S +C++
Sbjct: 185 SSKCVA 190
Score = 86 (35.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLIS 572
+V SPN+K +A S D ++S + L F GH G C + FSP L +
Sbjct: 495 SVAVSPNDKLIATGSQDRLAKLWSCPDCSLLG---VFTGHK-RGIWC-VQFSPVDQILAT 549
Query: 573 GDADGKCYIWDWKTTKLFKKWKAHDGVCISTLW 605
ADG +W + K ++ HD + ++
Sbjct: 550 SSADGTLKLWGLQDFSCLKTFEGHDASVLKIIF 582
Score = 78 (32.5 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 523 LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
L SMD KI I+ LN K +GH A SL F+ D + LIS D C +W
Sbjct: 169 LFSSSMDYKIRIWD-LNSSKC--VAVLDGHFSA--VTSLAFTADGNTLISSGRDKICMVW 223
Query: 583 DWKTTKLFKKWKAHDGV 599
+ KT + + ++ V
Sbjct: 224 NLKTRESIRTIPIYESV 240
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 69/272 (25%), Positives = 119/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 81 PQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVR 138
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G +F++A S D +K+W +++ + + + H VR
Sbjct: 139 SVHFCSDGQSFVTA--------------SDDKTIKVWSTHRQ-KFLFSLSQHINWVRCAK 183
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 184 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY-VDFHPSGTCVAAAGMDNTV 242
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + A++ P+ +L S D+ + I + L T
Sbjct: 243 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLY---TLH 299
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 300 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 74/306 (24%), Positives = 121/306 (39%)
Query: 305 PHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
P+ T+L P + P + H ++GH ++ + F + L S SMD + +W
Sbjct: 24 PYRAFTHLTMALPQED---PSLERH-FKGHRDAVTCVD-FSFNMKQLASGSMDSCLMVWH 78
Query: 365 VYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK 424
+ + R R + GH+ AV C N F S HLL S S D V++W
Sbjct: 79 MKPQSRAYR-FTGHKDAVT--CVN------------FSPSGHLLASGSRDKTVRIWVPNI 123
Query: 425 EHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCV 483
+ + H VR + F + G +F++A D+ +K+W T + + + C
Sbjct: 124 KGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCA 182
Query: 484 KFHPD--------EDKQ-HLDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKI 532
KF PD +DK L + + H + V P+ +A MDN +
Sbjct: 183 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTV 242
Query: 533 LIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKK 592
++ L ++ H A A L F P +YL++ +D I D +L
Sbjct: 243 KVWDVRTHRLLQH---YQLHSAAVNA--LSFHPSGNYLVTASSDSTLKILDLMEGRLLYT 297
Query: 593 WKAHDG 598
H G
Sbjct: 298 LHGHQG 303
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 60/233 (25%), Positives = 105/233 (45%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE- 466
L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +++W
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNI 123
Query: 467 SGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTS-SPNNK 521
GE + R T R V +C D Q D K I + H + S S +
Sbjct: 124 KGESTVFRAHTATVRSVHFC------SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHIN 177
Query: 522 WLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDMSYLISGD 574
W+ C S D ++++ ++ ++ KL K + E H G+ +DF P + + +
Sbjct: 178 WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAG 237
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
D +WD +T +L + ++ H + +HP + +VTA D+ T K+ D
Sbjct: 238 MDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDS-TLKILD 288
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 188 (71.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/209 (28%), Positives = 93/209 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D V+LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA 610
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C ++HP+ + D V + + + T H
Sbjct: 611 RLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++T SPN ++LA + D ++L++ + + K GH CSL FS D
Sbjct: 671 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK---GH--TDTVCSLRFSRDGE 725
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L SG D +WD K F+ + D
Sbjct: 726 ILASGSMDNTVRLWD--AVKAFEDLETDD 752
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 62/245 (25%), Positives = 108/245 (44%)
Query: 314 SDTPPDRCFLPKT--QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC 371
SD +R KT ++ GH+ + + P + LLS S D V+LW + + C
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSL-QTFTC 578
Query: 372 VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+ Y GH V D F+ G F+S H D +LW ++ +R
Sbjct: 579 LVGYKGHNYPVWDTQFSPYGYYFVSG-------GH-------DRVARLWAT-DHYQPLRI 623
Query: 432 YYGHRQAVRDICFNNTGTNFISAGY-DRYLKLWDTESGECISRFTSRK-VAYCVKFHPD- 488
+ GH V ++ +N+++ G DR ++LWD +G C+ FT K + + F P+
Sbjct: 624 FAGHLADVNCTRYH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 489 -------EDKQHL--DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSA 537
D + L DI + + + H+ + ++ S + + LA SMDN + ++ A
Sbjct: 683 RFLATGATDGRVLLWDIGHGLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
Query: 538 LNRFK 542
+ F+
Sbjct: 742 VKAFE 746
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 71/272 (26%), Positives = 118/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVR 107
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G + ++A S D VK+W +++ R + + H VR
Sbjct: 108 SVHFCSDGQSLVTA--------------SDDKTVKVWSTHRQ-RFLFSLTQHINWVRCAK 152
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S ECI + V Y V FHP +D V
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTY-VDFHPSGTCIAAAGMDNTV 211
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + A++ P+ +L S D+ + I + L T
Sbjct: 212 KVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLY---TLH 268
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 269 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 73/287 (25%), Positives = 114/287 (39%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P + H ++GH ++ + + + HL S SMD + +W + + R R + GH+ AV
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLA-SGSMDSTLMIWHMKPQSRAYR-FTGHKDAVT 65
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
C N F S HLL S S D V++W + + H VR +
Sbjct: 66 --CVN------------FSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVH 110
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------EDKQ-H 493
F + G + ++A D+ +K+W T + T C KF PD +DK
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 494 LDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
L + I H + V P+ +A MDN + ++ A L ++
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQH---YQL 227
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
H A A L F P +YLI+ +D I D +L H G
Sbjct: 228 HSAAVNA--LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/233 (24%), Positives = 105/233 (45%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW-DTE 466
L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +++W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 467 SGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNN-K 521
GE + R T R V +C D Q L D K + + H + S +
Sbjct: 93 KGESTVFRAHTATVRSVHFC------SDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHIN 146
Query: 522 WLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDMSYLISGD 574
W+ C S D ++++ ++ ++ KL K + E H G+ +DF P + + +
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
D +WD +T +L + ++ H + +HP + ++TA D+ T K+ D
Sbjct: 207 MDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITASSDS-TLKILD 257
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 128 (50.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSC-SMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
VHT+E H++ ++ + KS HLLL+ S D +KLW++ ++ C T +GH
Sbjct: 692 VHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDL-NQKECRNTMFGH-------- 742
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
TN ++ R+ P LL SCS D +KLW+V
Sbjct: 743 -----TNSVTHCRFSPDD-ELLASCSADGTLKLWDV 772
Score = 126 (49.4 bits), Expect = 0.00087, P = 0.00087
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + +CS+D +VK+W+ + V TY H + V F N K
Sbjct: 665 FSSDDSYIATCSVDKKVKIWDS-GTGKLVHTYEEHSEQVNCCHFTN-------------K 710
Query: 404 SAHLLLSC-SMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKL 462
S HLLL+ S D +KLW++ + C T +GH +V F+ S D LKL
Sbjct: 711 SNHLLLATGSNDSFLKLWDL-NQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKL 769
Query: 463 WDTES 467
WD S
Sbjct: 770 WDVRS 774
Score = 115 (45.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 95/428 (22%), Positives = 176/428 (41%)
Query: 392 TNFISAIRW--FPKSAHL-LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
T S I++ F HL +++ S C V+LW + + V GH V + F+ G
Sbjct: 837 TGHHSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRVK-VADCRGHLSWVHGVMFSPDG 894
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVD----MKYIA 504
++F++A D+ +++W+T C + K V F ++ + + + VD ++ IA
Sbjct: 895 SSFLTASDDQTIRVWETRK-VCKNSAIVLKQEIDVVF---QENEMMVLAVDNIRGLQLIA 950
Query: 505 DPT--MHSMP-AVTS----SPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAG 556
T + +P A S SP+ +++A + I I N NR + GH A
Sbjct: 951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPN----NRVFSSGIGHKKA- 1005
Query: 557 YACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
+ F+ D LIS D +W+W+T + + +AH + S++++
Sbjct: 1006 -VRHIQFTADGKTLISSSEDSVIQVWNWQTEE-YVFLQAHQETVKD--FRLLRDSRLLSW 1061
Query: 617 GWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQF 676
+D T KV N++ +E + + +Q LS I + +S + +++ A +
Sbjct: 1062 SFDG-TVKVW--NVITGRIERD------FTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Query: 677 SETNNKNYITEKNRNEIKNGSVLRLAFSASKTADDI----LSKLSDKNA-------SLEE 725
S K N S L T DD + +SD S+EE
Sbjct: 1113 SFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEE 1172
Query: 726 KTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSSQPASLDKFRANISRL 785
TA + V + ++M + ++K ++VV + ++ + +L K +
Sbjct: 1173 GTATHGGWVTDVCFSPD-RKMLVSAGGYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFR 1231
Query: 786 TYSEITNL 793
TY + NL
Sbjct: 1232 TYVTVDNL 1239
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 188 (71.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 71/272 (26%), Positives = 119/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+T+ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVR 107
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G +F++A S D VK+W +++ + + + H VR
Sbjct: 108 SVHFCSDGQSFVTA--------------SDDKTVKVWSTHRQ-KFLFSLSQHINWVRCAK 152
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY-VDFHPSGTCIAAAGMDNTV 211
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + A++ P+ +L S D+ + I + L T
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLY---TLH 268
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 269 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 172 (65.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 70/287 (24%), Positives = 115/287 (40%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P + H ++GH ++++ F + L S SMD + +W + + R R + GH+ AV
Sbjct: 9 PSLERH-FKGHRDAVTSVD-FSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVT 65
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
C N F S HLL S S D V++W + + H VR +
Sbjct: 66 --CVN------------FSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVH 110
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------EDKQ-H 493
F + G +F++A D+ +K+W T + + + C KF PD +DK
Sbjct: 111 FCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 494 LDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
L + + H + V P+ +A MDN + ++ L ++
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQH---YQL 227
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
H A A L F P +YL++ +D I D +L H G
Sbjct: 228 HSAAVNA--LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 150 (57.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 60/240 (25%), Positives = 107/240 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTV 85
Query: 461 KLW-DTESGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVT 515
++W GE + R T R V +C D Q D K + + H +
Sbjct: 86 RIWVPNVKGESTVFRAHTATVRSVHFC------SDGQSFVTASDDKTVKVWSTHRQKFLF 139
Query: 516 S-SPNNKWLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDM 567
S S + W+ C S D ++++ ++ ++ KL K + E H G+ +DF P
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 568 SYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
+ + + D +WD +T +L + ++ H + +HP + +VTA D+ T K+ D
Sbjct: 200 TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDS-TLKILD 257
Score = 38 (18.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 779 RANISRLTYSEITNLWQQER-TSREEWESHAKPIVELKELITPEIVDLIQQ 828
RA+ S T E+ L R S+E +SH++ V + + +T + ++ Q
Sbjct: 320 RASSSG-TLPEVDPLVPPGRGRSQESMQSHSQEPVSVPQSLTSTLEHIVGQ 369
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 12 PQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVR 69
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G +F++A S D VK+W +++ + + + H VR
Sbjct: 70 SVHFCSDGQSFVTA--------------SDDKTVKVWATHRQ-KFLFSLSQHINWVRCAK 114
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 115 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY-VDFHPSGTCIAAAGMDNTV 173
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + ++ P+ +L S D+ + I + L T
Sbjct: 174 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLY---TLH 230
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 231 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 62/255 (24%), Positives = 98/255 (38%)
Query: 356 MDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDC 415
MD + +W + + R R + GH+ AV C N F S HLL S S D
Sbjct: 1 MDSCLMVWHMKPQSRAYR-FTGHKDAVT--CVN------------FSPSGHLLASGSRDK 45
Query: 416 RVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFT 475
V++W + + H VR + F + G +F++A D+ +K+W T + + +
Sbjct: 46 TVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLS 104
Query: 476 SR-KVAYCVKFHPD--------EDKQ-HLDIPVDMKYIADPTMHS--MPAVTSSPNNKWL 523
C KF PD +DK L + + H + V P+ +
Sbjct: 105 QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCI 164
Query: 524 ACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
A MDN + ++ L ++ H A L F P +YLI+ +D I D
Sbjct: 165 AAAGMDNTVKVWDVRTHRLLQH---YQLHSAA--VNGLSFHPSGNYLITASSDSTLKILD 219
Query: 584 WKTTKLFKKWKAHDG 598
+L H G
Sbjct: 220 LMEGRLLYTLHGHQG 234
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 55/228 (24%), Positives = 100/228 (43%)
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW-DTESGEC- 470
MD + +W + + R R + GH+ AV + F+ +G S D+ +++W GE
Sbjct: 1 MDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST 59
Query: 471 ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTS-SPNNKWLACQ 526
+ R T R V +C D Q D K + H + S S + W+ C
Sbjct: 60 VFRAHTATVRSVHFC------SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCA 113
Query: 527 --SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDMSYLISGDADGKC 579
S D ++++ ++ ++ KL K + E H G+ +DF P + + + D
Sbjct: 114 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 173
Query: 580 YIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
+WD +T +L + ++ H +HP + ++TA D+ T K+ D
Sbjct: 174 KVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDS-TLKILD 219
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W V + + H VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVR 107
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G +F++A S D VK+W +++ + + + H VR
Sbjct: 108 SVHFCSDGQSFVTA--------------SDDKTVKVWATHRQ-KFLFSLSQHINWVRCAK 152
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY-VDFHPSGTCIAAAGMDNTV 211
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + ++ P+ +L S D+ + I + L T
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLY---TLH 268
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 269 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 70/287 (24%), Positives = 113/287 (39%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P + H ++GH ++ + F + L S SMD + +W + + R R + GH+ AV
Sbjct: 9 PSLERH-FKGHRDAVTCVD-FSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVT 65
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
C N F S HLL S S D V++W + + H VR +
Sbjct: 66 --CVN------------FSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVH 110
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------EDKQ-H 493
F + G +F++A D+ +K+W T + + + C KF PD +DK
Sbjct: 111 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 494 LDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
L + + H + V P+ +A MDN + ++ L ++
Sbjct: 171 LWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQH---YQL 227
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
H A L F P +YLI+ +D I D +L H G
Sbjct: 228 HSAA--VNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 148 (57.2 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW-DTE 466
L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +++W
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 467 SGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTS-SPNNK 521
GE + R T R V +C D Q D K + H + S S +
Sbjct: 93 KGESTVFRAHTATVRSVHFC------SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHIN 146
Query: 522 WLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDMSYLISGD 574
W+ C S D ++++ ++ ++ KL K + E H G+ +DF P + + +
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
D +WD +T +L + ++ H +HP + ++TA D+ T K+ D
Sbjct: 207 MDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDS-TLKILD 257
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 180 (68.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 68/272 (25%), Positives = 119/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+ + + GH ++++++ P +LL S S D V+LW + +R + H VR
Sbjct: 49 PQARAFRYVGHKDVVTSVQFSPLG-NLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVR 106
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F+ G L + S D +K+W +Y++ R + + Y H VR
Sbjct: 107 SVDFSADG--------------QFLATASEDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAK 151
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFT-SRKVAYCVKFHPD------EDKQHL-- 494
F+ G +S D+ +K+WDT + +C++ F+ S A V F+P+ H
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVK 211
Query: 495 --DIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
DI V+ K + +HS + V+ P+ ++ S D + I L + T +
Sbjct: 212 IWDIRVN-KLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIY---TLQ 267
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G ++ FS SG AD + +W
Sbjct: 268 GH--TGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/238 (26%), Positives = 104/238 (43%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F S L + S D + LW + R R Y GH+ V + F+ G SA DR +
Sbjct: 26 FSPSGKQLATASWDTFLMLWNCKPQARAFR-YVGHKDVVTSVQFSPLGNLLASASRDRTV 84
Query: 461 KLWDTESGECISRFTSRKVAY-CVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSS-P 518
+LW + S F + V F D Q L + K I M+ + S
Sbjct: 85 RLWIPDKRGKSSEFKAHTAPVRSVDF--SADGQFLATASEDKSIKVWNMYRQRFLYSLYR 142
Query: 519 NNKWLACQ--SMDNKILIFSALNR-FKL----NRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ W+ C S D ++++ + ++ K+ N++ G+A +DF+P+ + +
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQD 627
S +D IWD + KL + ++ H G C+S +HP + ++TA D T K+ D
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS--FHP-SGNYIITASSDG-TLKILD 256
Score = 152 (58.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 68/281 (24%), Positives = 113/281 (40%)
Query: 331 WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNT 390
++GH I+++ + P S L + S D + LW + R R Y GH+ V + F+
Sbjct: 14 FKGHKAAITSVDFSP-SGKQLATASWDTFLMLWNCKPQARAFR-YVGHKDVVTSVQFSPL 71
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
G +LL S S D V+LW K + + H VR + F+ G
Sbjct: 72 G--------------NLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 451 FISAGYDRYLKLWDTESGECI-SRFTSRKVAYCVKFHPD--------EDKQHLDIPVDMK 501
+A D+ +K+W+ + S + C KF PD EDK K
Sbjct: 117 LATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 502 YIADPTMHSMPA---VTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGY 557
+ S+ V +PN +A D+ + I+ ++N+ + ++ H G
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD----IRVNKLLQHYQVHS-GGV 231
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
C + F P +Y+I+ +DG I D +L + H G
Sbjct: 232 NC-VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 423 YKEHRCVRTYY-GHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VA 480
++E + Y+ GH+ A+ + F+ +G +A +D +L LW+ + R+ K V
Sbjct: 4 FQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVV 63
Query: 481 YCVKFHP--------DEDKQ-HLDIPVDMKYIADPTMHSMP--AVTSSPNNKWLACQSMD 529
V+F P D+ L IP ++ H+ P +V S + ++LA S D
Sbjct: 64 TSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASED 123
Query: 530 NKILIFSALN-RFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTK 588
I +++ RF + + H V C+ FSPD ++S D IWD +
Sbjct: 124 KSIKVWNMYRQRFLYSLYR--HTHWVR---CA-KFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 589 LFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKI 633
+ G ++P+ + +AG D T K+ D + K+
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTC-IASAGSDH-TVKIWDIRVNKL 220
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 165 (63.1 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 46/179 (25%), Positives = 81/179 (45%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAH------LLLSCSMDCRVKLWEVYKERRCVRTYY 376
L ++ EGHT + ++ W P S+H +L SCS D V++WE + R++
Sbjct: 8 LELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWE---QSSLSRSW- 63
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVY-KEHRCVRTYYGH 435
+ + T T + + W P S LL + S D +W+ Y E C+ T GH
Sbjct: 64 ----TCKTV-LEETHTRTVRSCAWSP-SGQLLATASFDGTTGIWKNYGSEFECISTLEGH 117
Query: 436 RQAVRDICFNNTGTNFISAGYDRYLKLWDTESG---ECISRFTSR-KVAYCVKFHPDED 490
V+ + +N +G+ + D+ + +W+ G +C + T + V++HP D
Sbjct: 118 ENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMD 176
Score = 159 (61.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYK--ERRCVRTYYGHRQAVRDI 385
+ T EGH + ++ W S L +CS D V +WEV + E C GH Q V+
Sbjct: 111 ISTLEGHENEVKSVSW-NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVK-- 167
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW---EVYKEHRCVRTY----YGHRQA 438
++W P + +L SCS D +K+W + E++CV+T GH
Sbjct: 168 -----------MVQWHP-TMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSST 215
Query: 439 VRDICFNNTGTNFISAGYDRYLKLWDTE 466
V I FN G ++ D LK+W T+
Sbjct: 216 VWSISFNAAGDKMVTCSDDLTLKIWGTD 243
Score = 157 (60.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVY-KERRCVRTYYGHRQAVRDICFNNT 390
E HT+ + + W P S LL + S D +W+ Y E C+ T GH V+ + +N +
Sbjct: 71 ETHTRTVRSCAWSP-SGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK--EHRCVRTYYGHRQAVRDICFNNTG 448
G+ L +CS D V +WEV + E+ C GH Q V+ + ++ T
Sbjct: 130 GS--------------CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Query: 449 TNFISAGYDRYLKLW--DTESGE--CI 471
S YD +K+W + + GE C+
Sbjct: 176 DVLFSCSYDNTIKVWWSEDDDGEYQCV 202
Score = 56 (24.8 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 589 LFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKV 625
L KK KAH+ S W P E ++++ + D K+
Sbjct: 309 LLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKI 345
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 177 (67.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 68/272 (25%), Positives = 118/272 (43%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P+++ + + GH ++ + + P S HLL S S D V++W + + + H VR
Sbjct: 50 PQSRAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVR 107
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ F + G + ++A S D VK+W +++ + + + H VR
Sbjct: 108 SVHFCSDGQSLVTA--------------SDDKTVKVWSTHRQ-KFLFSLSQHINWVRCAR 152
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK--VAYCVKFHPDED---KQHLDIPV 498
F+ G +SA D+ +KLWD S EC+ + V Y V FHP +D V
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY-VDFHPSGTCIAAASMDNTV 211
Query: 499 DM------KYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + + +HS + A++ P+ +L S D+ + I + L T
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLY---TLH 268
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
GH G A ++ FS Y SG +D + +W
Sbjct: 269 GHQ--GPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 167 (63.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 73/289 (25%), Positives = 116/289 (40%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
P + H ++GH I+++ F + L S SMD + +W + + R R + GH+ AV
Sbjct: 9 PSLERH-FKGHRDAITSVD-FSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVT 65
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW--EVYKEHRCVRTYYGHRQAVRD 441
C N F S HLL S S D V++W V E R H VR
Sbjct: 66 --CVN------------FSPSGHLLASGSRDKTVRIWIPNVKGESTVFRA---HTATVRS 108
Query: 442 ICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------EDKQ 492
+ F + G + ++A D+ +K+W T + + + C +F PD +DK
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT 168
Query: 493 -HLDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTF 549
L + + H + V P+ +A SMDN + ++ L +
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQH---Y 225
Query: 550 EGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
+ H A A L F P +YL++ +D I D +L H G
Sbjct: 226 QLHSAAVNA--LSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 60/240 (25%), Positives = 108/240 (45%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + L S SMD + +W + + R R + GH+ AV + F+ +G S D+ +
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTV 85
Query: 461 KLW-DTESGEC-ISRF---TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVT 515
++W GE + R T R V +C D Q L D K + + H +
Sbjct: 86 RIWIPNVKGESTVFRAHTATVRSVHFC------SDGQSLVTASDDKTVKVWSTHRQKFLF 139
Query: 516 S-SPNNKWLACQ--SMDNKILIFSALNR-FKLNRKKTFEG-HMVA---GYACSLDFSPDM 567
S S + W+ C S D ++++ ++ ++ KL K + E H G+ +DF P
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 568 SYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
+ + + D +WD +T +L + ++ H + +HP + ++TA D+ T K+ D
Sbjct: 200 TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLLTASSDS-TLKILD 257
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 184 (69.8 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 63/273 (23%), Positives = 121/273 (44%)
Query: 360 VKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKL 419
++LW+ Y+ + + H VR + F+N+ F+S D ++K+
Sbjct: 33 IQLWD-YRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSG--------------GDDYKIKV 77
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK- 478
W YK HRC+ T GH +R + F++ +SA D+ +++W+ +S CIS T
Sbjct: 78 WN-YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNH 136
Query: 479 VAYCVKFHPDEDKQHLDIPVDMKY-IADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSA 537
C FHP ED + +D + D + ++ ++SP + + M++ + F
Sbjct: 137 YVMCASFHPKEDLV-VSASLDQTVRVWD--IGALKKKSASPADDLMRFSQMNSDL--FGG 191
Query: 538 LNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFK--KWKA 595
++ K EGH G + F P + ++SG D + +W TK ++ +
Sbjct: 192 VDAIV---KYVLEGHD-RGVNWA-SFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
Query: 596 HDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
H S ++H + ++ + + + +V DA
Sbjct: 247 HMNNVSSVMFHAKQD--IIVSNSEDKSIRVWDA 277
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 177 (67.4 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 71/305 (23%), Positives = 127/305 (41%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
++HT EGH + AI + + + S D KLW + +C T+ GH + +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSA-ETGKCYHTFRGHTAEIVCLS 184
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
FN P+S ++ + SMD KLW++ V T GH + + F+
Sbjct: 185 FN-------------PQST-VVATGSMDTTAKLWDIQSGEEVV-TLTGHLAEIISLSFDT 229
Query: 447 TGTNFISAGYDRYLKLWDTESGECI-------SRFTSRKVAY-C-VKFHPDEDKQ-HLDI 496
+G I+ +D + +WD +G + + +S ++ C + DK L
Sbjct: 230 SGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWD 289
Query: 497 PVDMKYIADPTMHSMPAVTS--SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
K +A T H + S K +A S D +++A R + + EGH
Sbjct: 290 ATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITK---LEGH-- 344
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
G + F+P + L++G +D IWD +T + + + H S ++ ++ + V+
Sbjct: 345 EGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFN-YKGNIVI 403
Query: 615 TAGWD 619
T D
Sbjct: 404 TGSKD 408
Score = 170 (64.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 403 KSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT-GTNFISAGYDRYLK 461
K+ ++ S D K+W+ + T GHR V I FNN G + +D+ K
Sbjct: 102 KAGSCFITGSYDRTCKVWDTASGEE-LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 462 LWDTESGECISRFTSRKVAY-CVKFHPDED---KQHLDIPVDM------KYIADPTMHSM 511
LW E+G+C F C+ F+P +D + + + T H
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLA 220
Query: 512 PAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSY 569
++ S + + S D+ ++++ A K++ T GH A + +L FS D S
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVH---TLIGHC-AEISSAL-FSWDCSL 275
Query: 570 LISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDAN 629
+++G D C +WD + K HD + + + + + TA D TA+V +A
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD-YTGKLIATASADG-TARVYNAT 333
Query: 630 IVKIAVEME 638
K ++E
Sbjct: 334 TRKCITKLE 342
Score = 145 (56.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 59/266 (22%), Positives = 103/266 (38%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
HT+ GHT I + + P+S ++ + SMD KLW++ V T GH + + F+
Sbjct: 171 HTFRGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGEEVV-TLTGHLAEIISLSFD 228
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
+G I+ S D V +W+ R V T GH + F+
Sbjct: 229 TSGDRIITG--------------SFDHTVVVWDA-STGRKVHTLIGHCAEISSALFSWDC 273
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRK---VAYCVKFHPD-------EDKQHLDIPV 498
+ ++ D+ LWD SG+C++ T + C + + +
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNAT 333
Query: 499 DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
K I H + ++ +P L S D I+ L + EGH
Sbjct: 334 TRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCL---QVLEGHTDEI 390
Query: 557 YACSLDFSPDMSYLISGDADGKCYIW 582
++C+ ++ ++ +I+G D C IW
Sbjct: 391 FSCAFNYKGNI--VITGSKDNSCRIW 414
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 58/230 (25%), Positives = 93/230 (40%)
Query: 418 KLWEVYKEHRCVRTYY------GHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECI 471
+L E ++H C +Y H + ++ N G+ FI+ YDR K+WDT SGE +
Sbjct: 69 RLQEKLRQH-CDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEEL 127
Query: 472 SRFTS-RKVAYCVKFH-PDEDKQHL-DIPVDMKYIADPT---MHSMPAVTS-------SP 518
R V Y + F+ P DK K + T H+ T+ +P
Sbjct: 128 HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP 187
Query: 519 NNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGK 578
+ +A SMD ++ + ++ T GH+ + S D S D +I+G D
Sbjct: 188 QSTVVATGSMDTTAKLWDIQSGEEV---VTLTGHLAEIISLSFDTSGDR--IITGSFDHT 242
Query: 579 CYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
+WD T + H S L+ + S ++T D T + DA
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFS-WDCSLILTGSMDK-TCMLWDA 290
Score = 46 (21.3 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 22 HLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDVNTKEITKNLRYEELYAPEYG 78
H+ P+ + A + A S + + KV ++++ +++T E +N+ Y + YG
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 76/290 (26%), Positives = 126/290 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLLS SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-------------V 429
I ++TGT F S W K + + D ++ E R +
Sbjct: 193 DSIAVDSTGTKFCSG-SW-DKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPI 250
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T GH++A+ + +++ SA +D +K+WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHKEAISSVLWSDA-EEICSASWDHTIKVWDVESGSLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKWLACQSMD---NKILIFSAL-NRFK 542
K+ D + DP S+ +++ + + W+ + LI +L N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ D L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-DSGLLLSGGADNKLYSYRYSPT 417
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 392 TNFISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLLS SMD + LWE E V+ + GH +V I ++
Sbjct: 140 TDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDS 199
Query: 447 TGTNFISAGYDRYLKLWDT---ESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
TGT F S +D+ LK+W T + + + T+R P + ++ + + I
Sbjct: 200 TGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNR---------PRKKQKTEQLGLTRTPI 250
Query: 504 ADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
+ H A++S + + + S D+ I ++ + + K T G+ V + C +
Sbjct: 251 VTLSGHK-EAISSVLWSDAEEICSASWDHTIKVWDVESG---SLKSTLTGNKV--FNC-I 303
Query: 562 DFSPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGW 618
+SP L SG D +WD +T + + +H G S W P ++++
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 619 DAATAKVQDANIVKIAVEMEKQVPQLYQF--NQTLTLSSIIQEICSGWSLS---DSEQYA 673
D N+VK+ + P LY ++ LS + SG LS D++ Y+
Sbjct: 364 D---------NMVKLWDTRSCKAP-LYDLAAHEDKVLS--VDWTDSGLLLSGGADNKLYS 411
Query: 674 LQFSETNN 681
++S T +
Sbjct: 412 YRYSPTTS 419
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/137 (31%), Positives = 63/137 (45%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H ISAI + +L+ S D ++W + E + + T GH V+D+
Sbjct: 100 HDDWISAIEG---TEEWILTGSYDKTSRIWSL--EGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLLS SMD + LWE E V+ + GH +V I ++TG
Sbjct: 148 ------WVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTG 201
Query: 449 TNFISAGYDRYLKLWDT 465
T F S +D+ LK+W T
Sbjct: 202 TKFCSGSWDKMLKIWST 218
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 173 (66.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 69/253 (27%), Positives = 114/253 (45%)
Query: 395 ISAIRWFPKS---AHLLLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICFNNTGTN 450
I ++ W S + L++S S+D VK+W+ E ++ T GH+ V + + +G
Sbjct: 19 IWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNI 78
Query: 451 FISAGYDRYLKLWDTESGECISRFTSRKV-AYCVKFHPDEDKQHL------------DIP 497
S+ D +++LWD ESG+ I + V A+ V F PD QHL +
Sbjct: 79 MASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDS--QHLATGSHVGKVNIFGVE 136
Query: 498 VDMK-YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
K Y D + ++ SP+ K+LA ++D I IF L+ T EGH +
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMP- 192
Query: 557 YACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
SL FSPD L++ DG I++ + L H ++ + P + + V++
Sbjct: 193 -IRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD-THFVSS 250
Query: 617 GWDAATAKVQDAN 629
D + KV D +
Sbjct: 251 SSDKSV-KVWDVS 262
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 57/266 (21%), Positives = 116/266 (43%)
Query: 334 HTKGISAIRWFPKS---AHLLLSCSMDCRVKLWEVYKERRCVR-TYYGHRQAVRDICFNN 389
H I ++ W S + L++S S+D VK+W+ ER ++ T GH+ V + +
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
+G +++ S S+D ++LW++ + + +R + F+
Sbjct: 75 SG--------------NIMASSSLDAHIRLWDL-ESGKQIRAIDAGPVDAWSVAFSPDSQ 119
Query: 450 NFISAGYDRYLKLWDTESGEC-ISRFTSRKVAYCVKFHPDED---KQHLDIPVDMKYIAD 505
+ + + + ++ E+G+ S T K + + PD +D +++ IA
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 506 PTM------HSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
+ H+MP ++T SP+++ L S D I I+ + + T GH +
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHA---SLAATLSGH--GSW 234
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWD 583
++ FSPD ++ +S +D +WD
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWD 260
Score = 112 (44.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICFNNTGTNFISAGYDRY 459
F + LL++ S D +K++EV +H + T GH V ++ F+ T+F+S+ D+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYEV--QHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKS 255
Query: 460 LKLWDTESGECISRFTSRK-VAYCVKFHPDEDK 491
+K+WD + C+ F + + VK++ + K
Sbjct: 256 VKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK 288
Score = 67 (28.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV 365
T EGH G+ ++ P S +++ S S+D ++LW++
Sbjct: 59 TLEGHQLGVVSVDVSP-SGNIMASSSLDAHIRLWDL 93
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 155 (59.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
L+++ S +++W++ + + +RT GH+ + + F+ G F++
Sbjct: 77 LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYG-EFVA------------- 121
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
S S D +KLW++ ++ CV Y GH QAVR + F+ G SA D +KLWD +G+
Sbjct: 122 SGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 470 CISRFTSRK-VAYCVKFHPDE 489
+S F V+FHP+E
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNE 201
Score = 152 (58.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 40/156 (25%), Positives = 69/156 (44%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPD 488
D +KLWD C+ R+ A C++F PD
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPD 158
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/185 (25%), Positives = 81/185 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDAD 576
SG +D
Sbjct: 206 SGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 155 (59.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
L+++ S +++W++ + + +RT GH+ + + F+ G F++
Sbjct: 81 LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYG-EFVA------------- 125
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE 469
S S D +KLW++ ++ CV Y GH QAVR + F+ G SA D +KLWD +G+
Sbjct: 126 SGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
Query: 470 CISRFTSRK-VAYCVKFHPDE 489
+S F V+FHP+E
Sbjct: 185 MMSEFPGHTGPVNVVEFHPNE 205
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/173 (25%), Positives = 73/173 (42%)
Query: 319 DRCFLPKTQVHTWE--GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYY 376
DRC E H +S++ S LL + DCRV LW + K C+ +
Sbjct: 6 DRCAQAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLT 64
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
GH V + N P+ L+++ S +++W++ + + +RT GH+
Sbjct: 65 GHTSPVESVRLNT------------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHK 109
Query: 437 QAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPD 488
+ + F+ G S D +KLWD C+ R+ A C++F PD
Sbjct: 110 ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPD 162
Score = 130 (50.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 36 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 94
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 95 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 154
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ YL+
Sbjct: 155 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPN-EYLL 208
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 126 (49.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 546 KKTFEGHMVAGYACSLDF-SPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL 604
K+ + GH+ S++F P+ Y++SG D K +IWD ++ K+ + + HD S +
Sbjct: 770 KQVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVV 829
Query: 605 WHPHEPSKVVTAGWD 619
HP+EP + T+G D
Sbjct: 830 CHPNEPC-IATSGID 843
Score = 108 (43.1 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 376 YGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGH 435
+GH + V I FN+ G+ L++S D V++W+V K +C+ T YGH
Sbjct: 44 HGHNECVNSINFNDDGS--------------LIVSGGDDETVRIWDVGKR-KCLTTLYGH 88
Query: 436 RQAVRDICF-NNTGTNFISAGYDRYLKLWDTESGEC-ISRFTSRKV 479
V F NN IS G D ++ +D E+ +C + + S+KV
Sbjct: 89 STNVFATNFLNNDNRKVISGGNDADIRYYDIENQKCTVYKHHSKKV 134
Score = 102 (41.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
L KT++H GH + +++I F L++S D V++W+V K R+C+ T YGH V
Sbjct: 38 LEKTELH---GHNECVNSIN-FNDDGSLIVSGGDDETVRIWDVGK-RKCLTTLYGHSTNV 92
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
F TNF++ ++S D ++ +++ + +C Y H + V +
Sbjct: 93 ----F---ATNFLN------NDNRKVISGGNDADIRYYDI-ENQKCT-VYKHHSKKVLKL 137
Query: 443 CFNNTGTN-FISAGYDRYLKLWD 464
T F+S+ D ++L+D
Sbjct: 138 SVCPTQPQVFLSSSSDGSVRLFD 160
Score = 50 (22.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 114 RTFASYGYALDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKR-NRNDCPEDIEGF 172
RT S +++ S ES T +KN+ +ST L+K+KR N+ D +
Sbjct: 439 RTSNSSSGSINDSGSNESNK--TDTDSNKNENPIKSTKIGKLNKKKRRNKKKAKTDSDIS 496
Query: 173 LGPFEN 178
L N
Sbjct: 497 LSSCSN 502
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 171 (65.3 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 64/234 (27%), Positives = 108/234 (46%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
++S S+D VK+W+ E ++ T GH+ V + ++TG+ S+ D +++LWD E
Sbjct: 35 VISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 467 SGECISRFTSRKV-AYCVKFHPDED----KQHLD------IPVDMK-YIADPTMHSMPAV 514
+G+ I + V A+ + F PD H+ + K Y D + ++
Sbjct: 95 TGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSI 154
Query: 515 TSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGD 574
SP+ K+LA ++D I IF L+ T EGH + SL FSPD L++
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMP--IRSLTFSPDSQLLVTAS 209
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
DG I+D + L H ++ + P + + V++ D + KV DA
Sbjct: 210 DDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD-THFVSSSSDKSV-KVWDA 261
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 65/305 (21%), Positives = 132/305 (43%)
Query: 332 EGHTKGISAIRWFPKS---AHLLLSCSMDCRVKLWEVYKERRCVR-TYYGHRQAVRDICF 387
+ H I ++ W + ++S S+D VK+W+ E+ ++ T GH+ V +
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
++TG+ I+A S S+D ++LW++ + + +++ + F+
Sbjct: 73 SHTGS--IAA------------SSSLDAHIRLWDL-ETGKQIKSIDAGPVDAWSLAFS-P 116
Query: 448 GTNFISAG-YDRYLKLWDTESGEC-ISRFTSRKVAYCVKFHPDED---KQHLDIPVDMKY 502
+ F++ G + + ++ E+G+ S T K + + PD +D +++
Sbjct: 117 DSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 503 IADPTM------HSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
IA + H+MP ++T SP+++ L S D I I+ + N T GH
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA---NLAGTLSGH-- 231
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
+ ++ F PD ++ +S +D +WD T + H ++ SK+V
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNG-SGSKIV 290
Query: 615 TAGWD 619
+ G D
Sbjct: 291 SVGDD 295
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 171 (65.3 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 64/234 (27%), Positives = 108/234 (46%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
++S S+D VK+W+ E ++ T GH+ V + ++TG+ S+ D +++LWD E
Sbjct: 35 VISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 467 SGECISRFTSRKV-AYCVKFHPDED----KQHLD------IPVDMK-YIADPTMHSMPAV 514
+G+ I + V A+ + F PD H+ + K Y D + ++
Sbjct: 95 TGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSI 154
Query: 515 TSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGD 574
SP+ K+LA ++D I IF L+ T EGH + SL FSPD L++
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMP--IRSLTFSPDSQLLVTAS 209
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
DG I+D + L H ++ + P + + V++ D + KV DA
Sbjct: 210 DDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD-THFVSSSSDKSV-KVWDA 261
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 65/305 (21%), Positives = 132/305 (43%)
Query: 332 EGHTKGISAIRWFPKS---AHLLLSCSMDCRVKLWEVYKERRCVR-TYYGHRQAVRDICF 387
+ H I ++ W + ++S S+D VK+W+ E+ ++ T GH+ V +
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
++TG+ I+A S S+D ++LW++ + + +++ + F+
Sbjct: 73 SHTGS--IAA------------SSSLDAHIRLWDL-ETGKQIKSIDAGPVDAWSLAFS-P 116
Query: 448 GTNFISAG-YDRYLKLWDTESGEC-ISRFTSRKVAYCVKFHPDED---KQHLDIPVDMKY 502
+ F++ G + + ++ E+G+ S T K + + PD +D +++
Sbjct: 117 DSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 503 IADPTM------HSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
IA + H+MP ++T SP+++ L S D I I+ + N T GH
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA---NLAGTLSGH-- 231
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
+ ++ F PD ++ +S +D +WD T + H ++ SK+V
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNG-SGSKIV 290
Query: 615 TAGWD 619
+ G D
Sbjct: 291 SVGDD 295
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 88/363 (24%), Positives = 158/363 (43%)
Query: 282 LEEKTILHI-KDPTDYQGRSFLHPPHDVGTNLR--SDTPPDRCFLPKTQVHTWEGHTKGI 338
L ++ + H+ + DYQ S ++ H+V N SD D LP + H + H+ +
Sbjct: 159 LPKRRLEHLLQQAKDYQVSSQVY--HNVLKNFSFLSDYKADPSELPTKEYHVFHDHSDEV 216
Query: 339 SAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAI 398
I + + L S S D +++V +R R GH V + I
Sbjct: 217 WQIS-YSHNGRYLASASKDKTAIIFDVVNLKRVFRLI-GHIDTV-------------AYI 261
Query: 399 RWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDR 458
RW P +LL SCS D V LW+ + + +R Y H +V C+ G +FI+ D
Sbjct: 262 RWSPDDRYLL-SCSCDKSVILWDAFTGEK-LRDYK-HGFSVSCCCWLPDGLSFITGSPDC 318
Query: 459 YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLD-----IPVDMKYIADPTMHSMPA 513
++ W +GE + ++ + Y + D K ++ I + K+IA ++ +
Sbjct: 319 HITHWSL-NGEILYKWEDVNI-YDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETREC 376
Query: 514 VTS-SPNNKWLA-CQSMDNKILIFSA------LNRFKLNR-KKTFEGHMVAGYACSLDFS 564
+ S +K + C S D+K + + L + NR + + GH + + F
Sbjct: 377 IKKISLQSKVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGHKLGNFLIGSCFG 436
Query: 565 -PDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-WHPHEPSKVVTAGWDAAT 622
D ++++SG D K IW ++ KL H C++ + ++P +P + +AG D T
Sbjct: 437 GKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVK-CVNYVAYNPVDPYQFASAG-DDNT 494
Query: 623 AKV 625
++
Sbjct: 495 VRI 497
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 77/290 (26%), Positives = 126/290 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKS--AHLLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLLS SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-------------V 429
I ++TGT F S W K + + D +L E R +
Sbjct: 193 DSIAVDSTGTKFCSG-SW-DKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPI 250
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T GH++A+ + +++ SA +D +++WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHKEAISSVLWSDA-EEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKW---LACQSMDNKILIFSAL-NRFK 542
K+ D + DP S+ +++ + + W L + LI +L N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ D L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-DTGLLLSGGADNKLYSYRYSPT 417
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 392 TNFISAIRWFPKS--AHLLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLLS SMD + LWE E V+ + GH +V I ++
Sbjct: 140 TDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDS 199
Query: 447 TGTNFISAGYDRYLKLWD---TESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
TGT F S +D+ LK+W T+ + + T+R P + ++ + + I
Sbjct: 200 TGTKFCSGSWDKMLKIWSAVPTDEEDELEEPTNR---------PRKKQKTEQLGLTRTPI 250
Query: 504 ADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
+ H A++S + + + S D+ I ++ + + K T G+ V + C +
Sbjct: 251 VTLSGHK-EAISSVLWSDAEEICSASWDHTIRVWDVESG---SLKSTLTGNKV--FNC-I 303
Query: 562 DFSPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGW 618
+SP L SG D +WD +T + + +H G S W P ++++
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSL 363
Query: 619 DAATAKVQDANIVKIAVEMEKQVPQLYQF--NQTLTLSSIIQEICSGWSLS---DSEQYA 673
D NIVK+ + P LY ++ LS + +G LS D++ Y+
Sbjct: 364 D---------NIVKLWDTRSCKAP-LYDLAAHEDKVLS--VDWTDTGLLLSGGADNKLYS 411
Query: 674 LQFSETNN 681
++S T +
Sbjct: 412 YRYSPTTS 419
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H IS++R + +L+ S D ++W + E + + T GH V+D+
Sbjct: 100 HDDWISSVRG---AEEWILTGSYDKTSRIWSL--EGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKS--AHLLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLLS SMD + LWE E V+ + GH +V I ++TG
Sbjct: 148 ------WVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTG 201
Query: 449 TNFISAGYDRYLKLW 463
T F S +D+ LK+W
Sbjct: 202 TKFCSGSWDKMLKIW 216
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 72/303 (23%), Positives = 122/303 (40%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
+GH I + F L S D ++ LW V+ E GH+ A+ ++ FN
Sbjct: 33 QGHGGEIYTSQ-FSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFN--- 88
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
S+HL+ S D V++W++ + C+R + H V + N G
Sbjct: 89 ----------ADSSHLV-SAGTDKTVRVWDM-ETGSCIRNFKSHTDIVNSVDVNRRGPQM 136
Query: 452 I-SAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ---HLD--IPV------D 499
I SA D + + D S E +F + V F+ D +D I V D
Sbjct: 137 ICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRND 196
Query: 500 MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKT-FEG--HMVAG 556
++Y+ ++ +++ S N +L SMD ++ + R ++G H
Sbjct: 197 VRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEK 256
Query: 557 YACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
+SP +Y+ +G AD Y+W+ K+ K H G T HP + +++A
Sbjct: 257 NLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQI-LLSA 315
Query: 617 GWD 619
G D
Sbjct: 316 GSD 318
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 75/299 (25%), Positives = 124/299 (41%)
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR----CVRTYYGHRQAVRDICFNNT 447
+ +++++ P++ +LLS S D + LW + ++ R GH V D +
Sbjct: 15 SGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFD 74
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKV-AYCVKFHPDE--------DK--QHLDI 496
+SA +D+ ++LWD E GEC +F V PD DK + +I
Sbjct: 75 SHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 497 PVDMKYIADPTMHS--MPAVTSSPN--NKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
+ KY HS + V SPN N D + ++ L F L + + GH
Sbjct: 135 IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD-LETFSL--RTSHYGH 191
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDW-KTTKLFK-KWKAHDGVCI---STLWHP 607
GY ++ SPD S SG DG +WD ++T L+ + KA+ + + W
Sbjct: 192 --TGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLC 249
Query: 608 HEPSKVVTAGWDAATA-KVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWS 665
+ +D T KV + + + V + P+ +LT S Q + SGW+
Sbjct: 250 AATGSSIRI-FDLETQEKVDELTVDFVGVGKKSSEPECI----SLTWSPDGQTLFSGWT 303
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 74/315 (23%), Positives = 127/315 (40%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T EGH+ ++++ P++ +LLS S D + LW + ++ YG Q R +
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDD----VNYGVAQ--RRL---- 59
Query: 390 TG-TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
TG ++F+S +H LS S D ++LW++ K C + GH V + +
Sbjct: 60 TGHSHFVSDCA-LSFDSHYALSASWDKTIRLWDLEKGE-CTHQFVGHTSDVLSVSISPDN 117
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTS---RKVAYCVKFHPDEDKQHL-----DIPV-- 498
+S D+ +K+W+ G C T CV+F P+ D D V
Sbjct: 118 RQVVSGSRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKV 176
Query: 499 -DMKYIADPTMHS-----MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
D++ + T H + AVT SP+ A D ++++ LN
Sbjct: 177 WDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD------LNESTHLYSL 230
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKW---------KAHDGVCIST 603
+L FSP+ +L + I+D +T + + K+ + CIS
Sbjct: 231 EAKANINALVFSPNRYWLCAATGSS-IRIFDLETQEKVDELTVDFVGVGKKSSEPECISL 289
Query: 604 LWHPHEPSKVVTAGW 618
W P + + +GW
Sbjct: 290 TWSPD--GQTLFSGW 302
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 66/267 (24%), Positives = 104/267 (38%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH+ +S +H LS S D ++LW++ K C + GH V + +
Sbjct: 61 GHSHFVSDCA-LSFDSHYALSASWDKTIRLWDLEKGE-CTHQFVGHTSDVLSVSISPDNR 118
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN-- 450
+S R D +K+W + + T GH V + F+ N
Sbjct: 119 QVVSGSR--------------DKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLT 164
Query: 451 FISAGYDRYLKLWDTES--------GEC--ISRFT-SRKVAYCVKFHPDEDKQHLDIPVD 499
F+SAG+D+ +K+WD E+ G +S T S + C D D+
Sbjct: 165 FVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNES 224
Query: 500 MKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKT-FEG--HMVAG 556
+ ++ A+ SPN WL C + + I IF + K++ F G +
Sbjct: 225 THLYSLEAKANINALVFSPNRYWL-CAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSE 283
Query: 557 YAC-SLDFSPDMSYLISGDADGKCYIW 582
C SL +SPD L SG D +W
Sbjct: 284 PECISLTWSPDGQTLFSGWTDNLIRVW 310
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 180 (68.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 63/274 (22%), Positives = 120/274 (43%)
Query: 360 VKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKL 419
++LW+ Y+ + + H VR + F+N+ F+S D ++K+
Sbjct: 33 IQLWD-YRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSG--------------GDDYKIKV 77
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK- 478
W YK HRC+ T GH +R + F++ +SA D+ +++W+ +S C+S T
Sbjct: 78 WN-YKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNH 136
Query: 479 VAYCVKFHPDEDKQHLDIPVDMKY-IADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSA 537
C FHP ED + +D + D + ++ T SP + + M++ + F
Sbjct: 137 YVMCASFHPKEDLV-VSASLDQTVRVWD--IGALRKKTVSPADDIMRLTQMNSDL--FGG 191
Query: 538 LNRFKLNRKKTFEGH-MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFK--KWK 594
++ K EGH +A F P + ++SG D + +W TK ++ +
Sbjct: 192 VDAIV---KYVLEGHDRGVNWAA---FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
Query: 595 AHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
H S ++H + ++ + + + +V DA
Sbjct: 246 GHMNNVSSVMFHAKQD--IIVSNSEDKSIRVWDA 277
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/140 (32%), Positives = 70/140 (50%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC-VRTYYGHRQAVRDICFNNTG 391
GH +GIS ++W S +L S S D +++W+ E+RC VR GH V I FN G
Sbjct: 94 GHYRGISQVKWATGSKYLA-SASDDKTIRIWDF--EKRCSVRCLKGHTNYVSSIDFNPLG 150
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
T LL+S S D V++W + ++ C+R H + + + + GT
Sbjct: 151 T--------------LLVSGSWDETVRIWNL-QDGTCLRMLPAHSEPIISVSISADGTLC 195
Query: 452 ISAGYDRYLKLWDTESGECI 471
+A YD ++WD SG+C+
Sbjct: 196 ATASYDGMARIWDVLSGQCL 215
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-VRTYYGHRQAVRDICFNNTGTNFIS 453
IS ++W S +L S S D +++W+ E RC VR GH V I FN GT +S
Sbjct: 99 ISQVKWATGSKYLA-SASDDKTIRIWDF--EKRCSVRCLKGHTNYVSSIDFNPLGTLLVS 155
Query: 454 AGYDRYLKLWDTESGEC-----------ISRFTSRKVAYCVKFHPDEDKQHLDIPVD--M 500
+D +++W+ + G C IS S C D + D+ +
Sbjct: 156 GSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCL 215
Query: 501 KYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGYAC 559
K + +P + + + N K+L +++++I ++ ++ NR + F+ H+ Y+
Sbjct: 216 KTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWD----YRRNRVVRIFDSHVNTRYSM 271
Query: 560 SLD 562
S D
Sbjct: 272 SWD 274
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 176 (67.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/201 (28%), Positives = 92/201 (45%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F +LLLSCS D ++LW + CV TY GH V D+ F G F+S YD+
Sbjct: 458 FAPEMNLLLSCSEDSTIRLWSLLT-WSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTA 516
Query: 461 KLWDTESGECISRFTSR-KVAYCVKFHPDED---KQHLDIPVDM------KYIADPTMH- 509
+LW T+S + + F CV+FHP+ + D V + + + T H
Sbjct: 517 RLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHK 576
Query: 510 -SMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
S+ ++ S ++LA S+D+ I+I+ N + T H ++ FS D +
Sbjct: 577 GSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVT---TLLRH--TSTVTTITFSRDGT 631
Query: 569 YLISGDADGKCYIWDW-KTTK 588
L + D +WD+ K T+
Sbjct: 632 VLAAAGLDNNLTLWDFHKVTE 652
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/215 (25%), Positives = 91/215 (42%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GHT + + P+ +LLLSCS D ++LW + CV TY GH V D+ F G
Sbjct: 448 GHTGPVYRCAFAPEM-NLLLSCSEDSTIRLWSLLTWS-CVVTYRGHVYPVWDVRFAPHGY 505
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
F+S CS D +LW ++ +R + GH V + F+
Sbjct: 506 YFVS--------------CSYDKTARLWAT-DSNQALRVFVGHLSDVDCVQFHPNSNYVA 550
Query: 453 SAGYDRYLKLWDTESGECISRFTSRK-----VAY--CVKFHPDEDKQHLDIPVDMK---Y 502
+ DR ++LWD +G+ + T K +A+ C ++ H I D+
Sbjct: 551 TGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSL 610
Query: 503 IADPTMHS--MPAVTSSPNNKWLACQSMDNKILIF 535
+ H+ + +T S + LA +DN + ++
Sbjct: 611 VTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED------KQHLDIPVDM---KYI 503
D +KLWD C+ R+ A C++F PD H D+ K +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 504 ADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
++ H+ P V PN LA S D I + L +F++ EG G S+
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD-LEKFQV--VSCIEGE--PGPVRSV 237
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLF 590
F+PD L SG D ++ W+ + F
Sbjct: 238 LFNPDGCCLYSGCQDS-LRVYGWEPERCF 265
Score = 160 (61.4 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
SG +D WD + ++ + G S L++P
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED------KQHLDIPVDM---KYI 503
D +KLWD C+ R+ A C++F PD H D+ K +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 504 ADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
++ H+ P V PN LA S D I + L +F++ EG G S+
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD-LEKFQV--VSCIEGE--PGPVRSV 237
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLF 590
F+PD L SG D ++ W+ + F
Sbjct: 238 LFNPDGCCLYSGCQDS-LRVYGWEPERCF 265
Score = 160 (61.4 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
SG +D WD + ++ + G S L++P
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 182 (69.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 78/297 (26%), Positives = 124/297 (41%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F LL S S+D +K+W ++ G V+ + F+ G
Sbjct: 884 FSPDGKLLASSSLDSTIKVWNP-ATGELQQSLEGRSGWVKSVAFSPDGKK---------- 932
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
L S S VKLW ++T GH Q+VR + F+ G S+ D +KLW
Sbjct: 933 ----LASGSEKNTVKLWNP-ATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Query: 464 DTESGECISRFTSRKV-AYCVKFHPD-------EDKQHL---DIPV-DMKYIADPTMHSM 511
++ +GE F + V F PD D + D+ +++ + S+
Sbjct: 988 NSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSV 1047
Query: 512 PAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
AV SP++K LA S+D+ I ++ + +L R T EGH G S+ FSPD L
Sbjct: 1048 HAVAFSPDDKQLASSSLDSTIKLWDSATG-ELQR--TLEGHS-QGVR-SVTFSPDGKLLA 1102
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
S DG +W+ T +L + S + P K + +G+ +T K+ D+
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD--GKQLASGYYDSTIKLWDS 1157
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 84/335 (25%), Positives = 135/335 (40%)
Query: 323 LPKTQVHTW-------EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTY 375
LPK + TW E H + ++ + P L+ S S D VK+W+ ++T
Sbjct: 732 LPKVE-QTWSAEQQTLENHLGPVESVVFSPDGKQLV-SGSYDDTVKIWDP-ATGELLQTL 788
Query: 376 YGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGH 435
GH V + F+ G LL S S D + LW+ ++T+ GH
Sbjct: 789 DGHSGTVESLAFSPDGK--------------LLASGSYDNTIDLWDS-ATGELLQTFEGH 833
Query: 436 RQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED---K 491
++ + F G SA D +K+WD +GE S + V F PD
Sbjct: 834 PHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLAS 893
Query: 492 QHLDIPVDMKYIADPTMHS--------MPAVTSSPNNKWLACQSMDNKILIFSALNRFKL 543
LD + + A + + +V SP+ K LA S N + +++ L
Sbjct: 894 SSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELL 953
Query: 544 NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCIST 603
+T EGH + S+ FSPD L S +D +W+ T +L + +K HD +
Sbjct: 954 ---QTLEGHSQS--VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV 1008
Query: 604 LWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEME 638
+ P K + +G D T K+ D ++ +E
Sbjct: 1009 AFSPD--GKHLVSGSDDNTIKLWDLATSELQQSLE 1041
Score = 172 (65.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 79/275 (28%), Positives = 109/275 (39%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTG 391
E H++ + A+ + P L S S+D +KLW+ RT GH Q VR + F+ G
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLA-SSSLDSTIKLWDS-ATGELQRTLEGHSQGVRSVTFSPDG 1098
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
LL S S D +KLW +T G V + F+ G
Sbjct: 1099 K--------------LLASNSYDGTIKLWNPLTGE-LQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 452 ISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDEDKQHLDIPVDMKY-IADPTMH 509
S YD +KLWD+ +GE + V F PD K D + DP
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD-GKLLASGSYDQTAKLWDPATG 1202
Query: 510 SMPAVTSSPNNKWL--ACQSMDNKILIFSALNR-FKLNRKKTFEGHMVAG----YACSLD 562
+ + ++KW+ S D K+L S+ KL T E A S+
Sbjct: 1203 ELLQIFEG-HSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Query: 563 FSPDMSYLISGDA-DGKCYIWDWKTTKLFKKWKAH 596
FSPD + L S D D K IWD T +L + K H
Sbjct: 1262 FSPDGNRLASVDIFDTK--IWDPATGELLQALKGH 1294
Score = 165 (63.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 75/286 (26%), Positives = 117/286 (40%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T+EGH I ++ + P L S S D +K+W++ +T H Q+VR + F
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELA-SASDDSTIKIWDL-ATGELQQTLDSHSQSVRSVAF 884
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ G LL S S+D +K+W ++ G V+ + F+
Sbjct: 885 SPDGK--------------LLASSSLDSTIKVWNP-ATGELQQSLEGRSGWVKSVAFSPD 929
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDEDKQHLDIPVD--MKYIA 504
G S +KLW+ +GE + + V F PD KQ D +K
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPD-GKQLASSSSDTTIKLWN 988
Query: 505 DPTM--------HSM--PAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
T H + AV SP+ K L S DN I ++ L +L +++ E H
Sbjct: 989 STTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD-LATSEL--QQSLEDHSR 1045
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHD-GV 599
+ +A + FSPD L S D +WD T +L + + H GV
Sbjct: 1046 SVHAVA--FSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGV 1089
Score = 160 (61.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 70/253 (27%), Positives = 105/253 (41%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISA 454
+ A+ + P L S S+D +KLW+ RT GH Q VR + F+ G S
Sbjct: 1047 VHAVAFSPDDKQLA-SSSLDSTIKLWDS-ATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 455 GYDRYLKLWDTESGECISRFTSRKV-AYCVKFHPDEDKQ----HLDIPVDMKYIADPTM- 508
YD +KLW+ +GE T R V F PD KQ + D + + A +
Sbjct: 1105 SYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD-GKQLASGYYDSTIKLWDSATGELL 1163
Query: 509 -----HS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
HS + +V SP+ K LA S D ++ L + FEGH + + S+
Sbjct: 1164 QTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELL---QIFEGH--SKWVESV 1218
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAG---- 617
FSPD L S +WD T +L + D S + P + +++ +
Sbjct: 1219 AFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSP-DGNRLASVDIFDT 1277
Query: 618 --WDAATAKVQDA 628
WD AT ++ A
Sbjct: 1278 KIWDPATGELLQA 1290
Score = 131 (51.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 96/410 (23%), Positives = 160/410 (39%)
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPD 488
+T H V + F+ G +S YD +K+WD +GE + + F PD
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 489 ED---KQHLDIPVDMKYIADPTM--------HSMPAVTSSPNNKWLACQSMDNKILIFSA 537
D +D+ A + HS+ +V +P+ K LA S D+ I I+
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD- 862
Query: 538 LNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHD 597
L +L ++T + H + S+ FSPD L S D +W+ T +L + +
Sbjct: 863 LATGEL--QQTLDSHSQS--VRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 598 GVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSII 657
G S + P K + +G + T K+ + P + QTL S
Sbjct: 919 GWVKSVAFSPD--GKKLASGSEKNTVKLWN--------------PATGELLQTLEGHS-- 960
Query: 658 QEICSGWSLSDSEQYALQFSETNNK--NYITEKNRNEIKNGSV-LR-LAFSAS-----KT 708
Q + S D +Q A S+T K N T + + K + +R +AFS
Sbjct: 961 QSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSG 1020
Query: 709 ADDILSKLSDKNAS-LEEKTAAEFYCICIVLLNKTWKEMRATTEDF-VKVFSVVREQITR 766
+DD KL D S L++ + V + K++ +++ D +K++ ++ R
Sbjct: 1021 SDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQR 1080
Query: 767 ALS--SQPASLDKFRAN---ISRLTYSEITNLW-------QQERTSREEW 804
L SQ F + ++ +Y LW QQ T R +W
Sbjct: 1081 TLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDW 1130
Score = 50 (22.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 16 AESQTL--HLKPIESCAFS 32
AE QTL HL P+ES FS
Sbjct: 741 AEQQTLENHLGPVESVVFS 759
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 40/150 (26%), Positives = 76/150 (50%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GHTKGIS I + P ++++L SCS D ++LW + ++RC++ H
Sbjct: 61 ITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNI-TQQRCIKLLRKH--------- 110
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH-RCVRTYYGHRQAVRDICFNN 446
T I+ ++ F + ++L+S S D + +W++ + + T H V I
Sbjct: 111 ----TYHITTLK-FTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTP 165
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTS 476
+ +SA YD ++L+D ++ +C+ T+
Sbjct: 166 DDSIIVSASYDGLMRLFDLQTSQCLKTLTN 195
>UNIPROTKB|H7C0S6 [details] [associations]
symbol:ELMO1 "Engulfment and cell motility protein 1"
species:9606 "Homo sapiens" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
InterPro:IPR006816 Pfam:PF04727 PROSITE:PS51335 GO:GO:0005856
GO:GO:0006909 HGNC:HGNC:16286 ChiTaRS:ELMO1 EMBL:AC007349
EMBL:AC007444 EMBL:AC009196 EMBL:AC078843 EMBL:AC078844
EMBL:AC083861 ProteinModelPortal:H7C0S6 Ensembl:ENST00000420636
Bgee:H7C0S6 Uniprot:H7C0S6
Length = 182
Score = 149 (57.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 24/38 (63%), Positives = 34/38 (89%)
Query: 928 FVKVVLENSCRADEHECPFGRTSVELVKHLCEILRIGD 965
++++VLENS R D+HECPFGR+S+EL K LCEIL++G+
Sbjct: 133 YIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGE 170
Score = 142 (55.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 24/36 (66%), Positives = 32/36 (88%)
Query: 848 QVVLENSCRADEHECPFGRTSVELVKHLCEILRIGD 883
++VLENS R D+HECPFGR+S+EL K LCEIL++G+
Sbjct: 135 RIVLENSSREDKHECPFGRSSIELTKMLCEILKVGE 170
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 81/304 (26%), Positives = 117/304 (38%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
LP+ +V T + + A+R F + L+C D +KLW + +RTY GH V
Sbjct: 13 LPQKRVKTLDCGQGAVRAVR-FNVDGNYCLTCGSDKTLKLWNPLRGT-LLRTYSGHGYEV 70
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
D G+ F S+ L S D V LW+V + VR + GH V +
Sbjct: 71 LDAA----GS--------FDNSS--LCSGGGDKAVVLWDV-ASGQVVRKFRGHAGKVNTV 115
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
FN T +S D ++ WD S T + + D + L VD +
Sbjct: 116 QFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGRV 175
Query: 503 IA-DPTMHSMPA-VTSSPNNKWLACQSMDNKILIFSALNR-FKLNRKKTFE------GHM 553
D M + + SP C S D + + S+L+ +L K T E GH
Sbjct: 176 RRYDLRMGQLFSDYVGSPIT--CTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHK 233
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
Y S ++++S DGK Y WD L GV S +HP EP +
Sbjct: 234 NQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLL 293
Query: 614 VTAG 617
G
Sbjct: 294 TAMG 297
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 79/317 (24%), Positives = 123/317 (38%)
Query: 317 PPDRCFLPKTQVHTW---EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVR 373
P R P+ H W + + A+R F + LL+C D +KLW V + ++
Sbjct: 4 PQPRPQAPQLPQHLWRTVDCQQGAVRAVR-FNADGNYLLTCGSDKSLKLWSVSRGT-LLK 61
Query: 374 TYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYY 433
TY GH V D G+ + S L SCS D V LW+V + R
Sbjct: 62 TYSGHGYEVLDA----DGS--------YDNSQ--LCSCSSDKTVILWDV-ASGQVTRKLR 106
Query: 434 GHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES---------GECISRFTSRKVAY--C 482
GH V + FN T +S D ++ WDT S E +S KV+
Sbjct: 107 GHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHEL 166
Query: 483 VKFHPDEDKQHLDI---PVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALN 539
+ D + D+ + + YI P + V S + + S+D+ + +
Sbjct: 167 LTGSVDGRVRRYDLRMGQLQVDYIGSP----ITCVCFSRDGQCTLSSSLDSTVRLLDKST 222
Query: 540 RFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
L + GH+ GY + ++++S DG Y WD L K V
Sbjct: 223 GEMLGE---YSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAV 279
Query: 600 CISTLWHPHEPSKVVTA 616
S +HP EP +++T+
Sbjct: 280 VQSLSFHPTEP-RLLTS 295
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 177 (67.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 62/198 (31%), Positives = 88/198 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLSCS D +LW + V Y GH V D+ F+ G F +A +DR
Sbjct: 687 FSPDSQYLLSCSEDTTARLWSMETMSNLV-CYKGHNFPVWDVSFSPFGFYFATASHDRTA 745
Query: 461 KLWDTESGECISRFTSRKVAYC--VKFHPD--------EDKQHLDIPVDM-KYIADPTMH 509
+LW T + FT ++ C V+FHP+ DK + K + H
Sbjct: 746 RLWTTNHISPLRIFTGH-LSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGH 804
Query: 510 SMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDM 567
P V SP+ + LA D ++++ L+ K + K +GH Y SLDFS D
Sbjct: 805 RAPIYTVAFSPDGRLLATAGEDTSVILWD-LSTGK--KVKKMDGHTKCVY--SLDFSCDG 859
Query: 568 SYLISGDADGKCYIWDWK 585
S L SG +D +WD K
Sbjct: 860 SILASGSSDCTVRLWDVK 877
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 42/165 (25%), Positives = 69/165 (41%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+++ T+ GH+ + + P S +LL SCS D +LW + V Y GH V D
Sbjct: 669 ESEFKTFLGHSGPVYGCSFSPDSQYLL-SCSEDTTARLWSMETMSNLV-CYKGHNFPVWD 726
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ F+ G F +A S D +LW +R + GH + F
Sbjct: 727 VSFSPFGFYFATA--------------SHDRTARLWTT-NHISPLRIFTGHLSDCNTVRF 771
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVA-YCVKFHPD 488
+ + D+ +LW+ ++G+C+ F + Y V F PD
Sbjct: 772 HPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPD 816
Score = 50 (22.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 311 NLRSDTPPDRCFLPKTQVHTWEG-HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV--YK 367
+L S P CF T +T++G +T IS K A L+ D VK+W + K
Sbjct: 540 SLSSSHLPSICFY--TIFNTYQGLNTTDIS------KDAQLVAGGFSDSSVKIWNLKEMK 591
Query: 368 ERRCVRTYYGHRQAVRDICFNNTG 391
E+R + +Q + N G
Sbjct: 592 EQRLQQQQQQQQQQQQQQNSNQNG 615
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 173 (66.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 323 LPKTQVH-TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQA 381
LPK V T GHT +S + P S L + S D VKLW++ K C+ T+ GH +A
Sbjct: 381 LPKCNVLLTGFGHTDWLSDCCFHP-SGDKLATSSGDTTVKLWDLCKGD-CILTFEGHSRA 438
Query: 382 VRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRD 441
V +++ G NF++ S S+D K+W+V E RC T YGH +V
Sbjct: 439 VWSCTWHSCG-NFVA-------------SSSLDKTSKIWDVNSE-RCRCTLYGHTDSVNS 483
Query: 442 ICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMK 501
I F +++ D+ L +WD +G C + + + + H+ D
Sbjct: 484 IEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHM--HSINDAIFDPRGHMIASCDAC 541
Query: 502 YIAD--PTMHSMPAVT----SSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVA 555
+ +P V+ SP N+ + S + S L K+ E H +
Sbjct: 542 GVTKLWDFRKLLPIVSIDIGPSPGNE-VNFDSSGRVLAQASGNGVIHLLDLKSGEIHKLM 600
Query: 556 GY---ACSLDFSPDMSYLISGDADGKCYIW 582
G+ A ++ FS D L SG +DG W
Sbjct: 601 GHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 161 (61.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 294 TDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQ-VHTWEGHTKGISAIRWFPKSAHLLL 352
TD+ HP D DT L K + T+EGH++ + + W + +
Sbjct: 394 TDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWH-SCGNFVA 452
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
S S+D K+W+V ER C T YGH T+ +++I +FP S + LL+ S
Sbjct: 453 SSSLDKTSKIWDVNSER-CRCTLYGH-------------TDSVNSIEFFPFS-NTLLTSS 497
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
D + +W+ + C ++ YGH ++ D F+ G S KLWD
Sbjct: 498 ADKTLSIWDA-RTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWD 548
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 168 (64.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 73/303 (24%), Positives = 120/303 (39%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
++HT EGH + AI + + + S D KLW + +C T+ GH + +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSA-ETGKCFYTFRGHTAEIVCLA 184
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
FN P+S L+ + SMD KLW+V V T GH + +CFN
Sbjct: 185 FN-------------PQST-LVATGSMDTTAKLWDVESGEE-VSTLAGHFAEIISLCFNT 229
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTS-RKVAYCVKFHPDEDK-QHLDIPVDMKYIA 504
TG ++ +D LWD SG + + R CV+F+ D + K +
Sbjct: 230 TGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCK-VW 288
Query: 505 DPTMHSMPAVTSSPNNKWL-ACQSMDNKILIF-SALNRFKLNRKKTF------EGHMVAG 556
D A N++ L C + +++ SA ++ TF EGH G
Sbjct: 289 DAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHK--G 346
Query: 557 YACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
+ F+ S +++ D +W KT + + H S ++ +E ++T
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN-YEGDTIITG 405
Query: 617 GWD 619
D
Sbjct: 406 SKD 408
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/251 (20%), Positives = 97/251 (38%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT-GTNFISAGYDRY 459
F KS ++ S D K+W+ + T GHR V I FNN G + +D+
Sbjct: 100 FNKSGSCFITGSYDRTCKIWDTASGEE-LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKT 158
Query: 460 LKLWDTESGECISRFTSRKVAY-CVKFHPDED---KQHLDIPVDM------KYIADPTMH 509
KLW E+G+C F C+ F+P +D + + ++ H
Sbjct: 159 CKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGH 218
Query: 510 SMPAVTSSPNNKW--LACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDM 567
++ N L S D+ +++ + K++ GH G + F+ D
Sbjct: 219 FAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH---VLSGHR--GEISCVQFNWDC 273
Query: 568 SYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
S + + D C +WD + + H+ + ++ + + TA D T++V
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFN-YTGQLIATASADG-TSRVFS 331
Query: 628 ANIVKIAVEME 638
+ + ++E
Sbjct: 332 TDTFQCLCQLE 342
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 61/236 (25%), Positives = 96/236 (40%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
LL C + +V + K + R H + ++ FN +G+ FI+ YDR K+WDT S
Sbjct: 65 LLICKLQEKVGQKDERKFY-LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTAS 123
Query: 468 GECISRFTS-RKVAYCVKFH-PDEDKQHL-DIPVDMKYIADPTM--------HSMPAV-- 514
GE + R V Y + F+ P DK K + T H+ V
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL 183
Query: 515 TSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGD 574
+P + +A SMD ++ + +++ T GH SL F+ L++G
Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDVESGEEVS---TLAGHFAE--IISLCFNTTGDRLVTGS 238
Query: 575 ADGKCYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQDA 628
D +WD + + H G C+ W + S + TA D + KV DA
Sbjct: 239 FDHTAILWDVPSGRKVHVLSGHRGEISCVQFNW---DCSLIATASLDKS-CKVWDA 290
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 70/294 (23%), Positives = 114/294 (38%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F KS ++ S D K+W+ + T GHR V I FNN + K
Sbjct: 100 FNKSGSCFITGSYDRTCKIWDTASGEE-LHTLEGHRNVVYAIAFNNP---------YGDK 149
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
A + S D KLW + +C T+ GH + + FN T + D KLW
Sbjct: 150 VA----TGSFDKTCKLWSA-ETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 464 DTESGECISRFT---SRKVAYCVKFHPDE----DKQHL----DIPVDMK-YIADPTMHSM 511
D ESGE +S + ++ C D H D+P K ++ +
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 512 PAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
V + + +A S+D ++ A L T GH +++ + +
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCL---ATLLGHNDEVLDVCFNYTGQL--IA 319
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKV 625
+ ADG ++ T + + + H G IS + + S+V+TA D T++V
Sbjct: 320 TASADGTSRVFSTDTFQCLCQLEGHKGE-ISKVCFNAQGSRVLTASVDK-TSRV 371
Score = 48 (22.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 22 HLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLTDVNTKEITKNLRYEELYAPEYG 78
H+ P+ + AF+ + S + + K+ ++++ +++T E +N+ Y + YG
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 171 (65.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 80/303 (26%), Positives = 125/303 (41%)
Query: 333 GHTKGISAIRWFP----KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
GH K I+ + W P L S S D ++W+V K +C+ GH
Sbjct: 202 GHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDV-KLGQCLMNIAGH---------- 250
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT- 447
TN ++A+RW A L+ + S D VK+W C RT+ GH V +I +
Sbjct: 251 ---TNAVTAVRW--GGAGLIYTSSKDRTVKMWRAADGILC-RTFSGHAHWVNNIALSTDY 304
Query: 448 --GTNFISAGYDR---YLKLWDTESGE-CISRFTS---RKVAYCVKFHPDEDKQHLDIPV 498
T DR +L L E E + R+ + +V V D++ +L
Sbjct: 305 VLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCS-DDNTLYLWRNN 363
Query: 499 DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAG 556
K + T H + V SP+ K +A S D + ++ A + + TF GH+ A
Sbjct: 364 QNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYM---ATFRGHVQAV 420
Query: 557 YACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
Y + +S D ++SG D +W +T KL ++ H W P + S+V +
Sbjct: 421 YTVA--WSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP-DGSRVASG 477
Query: 617 GWD 619
G D
Sbjct: 478 GKD 480
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 66/333 (19%), Positives = 131/333 (39%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T GH + + + W P L C + +W+ ++ R GH++ +
Sbjct: 151 ETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSII-IWDPETGQQKGRPLSGHKKHINC 209
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ + + P+ L S S D ++W+V K +C+ GH AV + +
Sbjct: 210 LAWEPYHRD--------PE-CRKLASASGDGDCRIWDV-KLGQCLMNIAGHTNAVTAVRW 259
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSR-----KVA----YCVK---FHPDEDKQ 492
G + S+ DR +K+W G F+ +A Y ++ FHP +D+
Sbjct: 260 GGAGLIYTSSK-DRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRS 318
Query: 493 HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
+ + + + + + AV ++C S DN + ++ N+ K + T GH
Sbjct: 319 KSHLSLSTEELQESALKRYQAVCPDEVESLVSC-SDDNTLYLWRN-NQNKCVERMT--GH 374
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSK 612
+ +SPD+ + S D +W + ++ H + W S+
Sbjct: 375 Q--NVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSAD--SR 430
Query: 613 VVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
++ +G +T KV K+A E+ +++
Sbjct: 431 LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVF 463
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 69/262 (26%), Positives = 114/262 (43%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GHT ++A+RW A L+ + S D VK+W C RT+ GH V +I + T
Sbjct: 249 GHTNAVTAVRW--GGAGLIYTSSKDRTVKMWRAADGILC-RTFSGHAHWVNNIALS---T 302
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
+++ +R P H + S + L + ++ Y QAV C + + +
Sbjct: 303 DYV--LRTGP--FHPVKDRSKS-HLSLSTEELQESALKRY----QAV---CPDEV-ESLV 349
Query: 453 SAGYDRYLKLWDTESGECISRFTSRK-VAYCVKFHPDE--------DKQ-HLDIPVDMKY 502
S D L LW +C+ R T + V VK+ PD DK L D +Y
Sbjct: 350 SCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQY 409
Query: 503 IADPTMH--SMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACS 560
+A H ++ V S +++ + S D+ + ++S + KL ++ GH A
Sbjct: 410 MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK-KLAQE--LPGH--ADEVFG 464
Query: 561 LDFSPDMSYLISGDADGKCYIW 582
+D++PD S + SG D +W
Sbjct: 465 VDWAPDGSRVASGGKDKVIKLW 486
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 125 (49.1 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH + + + PK ++L S S D V LW+V + R +R+ H V I F GT
Sbjct: 304 GHHNYVYCLAFSPKG-NILASGSYDEAVFLWDV-RAGRLMRSLPAHSDPVSGIDFCRDGT 361
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTY-YGHRQAVRDICFNNTGTNF 451
L++SCS D +++W+ +C+RT + AV ++CF+ G
Sbjct: 362 --------------LVVSCSTDGLIRIWDT-ATGQCLRTLVHEDNPAVTNVCFSPNGRYI 406
Query: 452 ISAGYDRYLKLWD 464
++ D ++LWD
Sbjct: 407 LAFNLDSCIRLWD 419
Score = 116 (45.9 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
N++ + + PK ++L S S D V LW+V + R +R+ H V I F GT +
Sbjct: 307 NYVYCLAFSPKG-NILASGSYDEAVFLWDV-RAGRLMRSLPAHSDPVSGIDFCRDGTLVV 364
Query: 453 SAGYDRYLKLWDTESGECI 471
S D +++WDT +G+C+
Sbjct: 365 SCSTDGLIRIWDTATGQCL 383
Score = 93 (37.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTY-YGHRQAVRDICFNNTGT 392
H+ +S I F + L++SCS D +++W+ +C+RT + AV ++CF+ G
Sbjct: 347 HSDPVSGID-FCRDGTLVVSCSTDGLIRIWDT-ATGQCLRTLVHEDNPAVTNVCFSPNG- 403
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEH--RCVRTYYGH 435
R+ +L+ ++D ++LW+ Y H + +TY GH
Sbjct: 404 ------RY-------ILAFNLDSCIRLWD-YIAHPSKVKKTYQGH 434
Score = 86 (35.3 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 568 SYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDA 620
+++ S DG +WD K+ ++ +K AHDGVC W +V+AG DA
Sbjct: 487 AFVASASEDGHIVLWDVKSKEVVQKIAAHDGVCF---WVDVVGDTMVSAGKDA 536
Score = 80 (33.2 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 32/143 (22%), Positives = 58/143 (40%)
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-----VAYC-- 482
R GH V + F+ G S YD + LWD +G + + + +C
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRD 359
Query: 483 ----VKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTS---SPNNKWLACQSMDNKILIF 535
V D + D + + PAVT+ SPN +++ ++D+ I ++
Sbjct: 360 GTLVVSCSTDGLIRIWDTATG-QCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLW 418
Query: 536 SALNRFKLNRKKTFEGHMVAGYA 558
+ KKT++GH+ G++
Sbjct: 419 DYIAH-PSKVKKTYQGHVNTGFS 440
Score = 64 (27.6 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWE 364
+ T GH G+S + W P S L S D ++LW+
Sbjct: 215 IDTLVGHMAGVSCLAWSPDSGTLATG-SDDKAIRLWD 250
Score = 50 (22.7 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 563 FSPDMSYLISGDADGKCYIWDW--KTTKLFKKWKAH 596
FSP+ Y+++ + D +WD+ +K+ K ++ H
Sbjct: 399 FSPNGRYILAFNLDSCIRLWDYIAHPSKVKKTYQGH 434
Score = 46 (21.3 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 453 SAGYDRYLKLWDTESGECISRFTS 476
SA D ++ LWD +S E + + +
Sbjct: 491 SASEDGHIVLWDVKSKEVVQKIAA 514
Score = 42 (19.8 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 110 ENQRRTFASYGYALDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRND 164
+ RR+ Y+ S S+ S S ++ + STS+ +R R+R D
Sbjct: 68 DEARRSREKRSYSRTRSLRSRSRSRPTSRSRSRSHSRSRSTSRSTDRRRSRSRRD 122
Score = 42 (19.8 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 177 ENQRRTFASYGYALDPSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRKRNRND 231
+ RR+ Y+ S S+ S S ++ + STS+ +R R+R D
Sbjct: 68 DEARRSREKRSYSRTRSLRSRSRSRPTSRSRSRSHSRSRSTSRSTDRRRSRSRRD 122
Score = 38 (18.4 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 125 PSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRN 163
P+S S+ S S ++ S S+R R R+R+
Sbjct: 93 PTSRSRSRSHSRSRSTSRSTDRRRSRSRRDSSSRSRSRS 131
Score = 38 (18.4 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 192 PSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRKRNRN 230
P+S S+ S S ++ S S+R R R+R+
Sbjct: 93 PTSRSRSRSHSRSRSTSRSTDRRRSRSRRDSSSRSRSRS 131
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 170 (64.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 73/334 (21%), Positives = 131/334 (39%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ ++ RT GH + +
Sbjct: 146 ETPHFTCKGHRHWVLSISWSPDGRKLASGCK-NGQILLWDPSTGKQVGRTLAGHSKWITG 204
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ + N P+ ++ S S D V++W+ RC R GH Q+V + +
Sbjct: 205 LSWEPLHAN--------PECRYVA-SSSKDGSVRIWDT-TAGRCERILTGHTQSVTCLRW 254
Query: 445 NNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPDEDKQ 492
G + SA DR +K+W G C + + Y ++ F P E
Sbjct: 255 GGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASV 313
Query: 493 H-LDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ ++ + + + V + L S D + ++S K + T G
Sbjct: 314 NPQDLQGSLQELKERALSRYNLVRGQGPER-LVSGSDDFTLFLWSPAEDKKPLTRMT--G 370
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H + FSPD + S D +WD +T K + H W S
Sbjct: 371 HQAL--INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD--S 426
Query: 612 KVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
+++ +G +T KV D K+A+++ ++Y
Sbjct: 427 RLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVY 460
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 84/318 (26%), Positives = 125/318 (39%)
Query: 324 PKT--QV-HTWEGHTKGISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKERRCVRTYY 376
P T QV T GH+K I+ + W P A+ + S S D V++W+ RC R
Sbjct: 185 PSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDT-TAGRCERILT 243
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
GH Q+V C +RW LL S S D +K+W + C RT GH
Sbjct: 244 GHTQSVT--C-----------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHG 287
Query: 437 QAVRDICFNN-----TGTNFISAG-----YDRYLKLWDTESGECISRFTSRKVAYCVKFH 486
V + + TG F A D L + + +SR+ + +
Sbjct: 288 HWVNTMALSTDYALRTGA-FEPAEASVNPQDLQGSLQELKE-RALSRYNLVRGQGPERLV 345
Query: 487 PDEDKQHLDI--PV-DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRF 541
D L + P D K + T H + V SP+++ +A S D I ++
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 542 KLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCI 601
L + GH+ A Y + +S D L+SG +D +WD K KL H
Sbjct: 406 YL---ASLRGHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVY 460
Query: 602 STLWHPHEPSKVVTAGWD 619
+ W P + +V + G D
Sbjct: 461 AVDWSP-DGQRVASGGKD 477
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 68/254 (26%), Positives = 113/254 (44%)
Query: 395 ISAIRWFPKS---AHLLLSCSMDCRVKLWEVYKEHRCVRTYY--GHRQAVRDICFNNTGT 449
I ++ W S + L++S S+D VK+W+ + + R + GH+ V + + +G
Sbjct: 19 IWSVGWGKNSNDGSELVISGSLDDLVKVWK-WSDERLEMQWALEGHQLGVVSVDVSPSGN 77
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRKV-AYCVKFHPDEDKQHL------------DI 496
S+ D +++LWD ESG+ I + V A+ V F PD QHL +
Sbjct: 78 IMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDS--QHLATGSHVGKVNIFGV 135
Query: 497 PVDMK-YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVA 555
K Y D + ++ SP+ K+LA ++D I IF L+ T EGH +
Sbjct: 136 ETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMP 192
Query: 556 GYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVT 615
SL FS D L++ DG I+D + L H ++ + P + + V+
Sbjct: 193 --IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD-AHFVS 249
Query: 616 AGWDAATAKVQDAN 629
+ D + KV D +
Sbjct: 250 SSSDKSV-KVWDVS 262
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 171 (65.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 66/223 (29%), Positives = 98/223 (43%)
Query: 373 RTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTY 432
R GH V + F + T +A+ P +A LLS S D ++LW + +C+ Y
Sbjct: 301 RRLIGHSGPVYAVAFAPSATPSENAVA--PTNARWLLSSSADRTIRLWSL-DLWQCMVVY 357
Query: 433 YGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDEDK 491
GH Q V D+ + G F+S G+D+ +LW T+ F + CV FHP+
Sbjct: 358 KGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAY 417
Query: 492 QHL---DIPVDMKYIADP------TMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNR 540
D V M + T H+ + A+ S + K LA IL++ L
Sbjct: 418 VFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWD-LGP 476
Query: 541 FKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
+L K GH G SL +S + + L+SG ADG +WD
Sbjct: 477 GRL--LKRMRGHGKGGI-WSLSWSVESNVLVSGGADGTVRVWD 516
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 345 PKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKS 404
P +A LLS S D ++LW + +C+ Y GH Q V D+ +W P
Sbjct: 328 PTNARWLLSSSADRTIRLWSL-DLWQCMVVYKGHDQPVWDL-------------QWGP-F 372
Query: 405 AHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
H +S D +LW V R R + GH Q V +CF+ + DR +++W
Sbjct: 373 GHYFVSGGHDKTARLW-VTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWA 431
Query: 465 TESGECISRFT 475
+G + FT
Sbjct: 432 VTTGNAVRMFT 442
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 165 (63.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 81/310 (26%), Positives = 121/310 (39%)
Query: 317 PPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYY 376
PP+ LP+ ++ T + + A+R F + L+C D +KLW + +RTY
Sbjct: 10 PPE---LPQKRLKTLDCGQGAVRAVR-FNVDGNYCLTCGSDKTLKLWNPLRGT-LLRTYS 64
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
GH V D G+ F S+ L S D V LW+V + VR + GH
Sbjct: 65 GHGYEVLDAA----GS--------FDNSS--LCSGGGDKAVVLWDV-ASGQVVRKFRGHA 109
Query: 437 QAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDI 496
V + FN T +S D ++ WD S T + V D + L
Sbjct: 110 GKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDHEILAG 169
Query: 497 PVDMKYIA-DPTMHSMPA-VTSSPNNKWLACQSMDNKILIFSALNR-FKLNRKKT----- 548
VD + D M + + SP C S D + + S+L+ +L K T
Sbjct: 170 SVDGRVRRYDLRMGQLFSDYVGSPIT--CTCFSRDGQCTLVSSLDSTLRLLDKDTGELLG 227
Query: 549 -FEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
++GH Y S ++++S DGK + WD L GV S +HP
Sbjct: 228 EYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHP 287
Query: 608 HEPSKVVTAG 617
EP + G
Sbjct: 288 TEPCLLTAMG 297
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 167 (63.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 64/252 (25%), Positives = 108/252 (42%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F +LL S S D V+LW + +R + H VR + F+ G
Sbjct: 26 FSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADG------------ 72
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
L + S D +K+W +Y++ R + + Y H VR F+ G +S D+ +K+W
Sbjct: 73 --QFLATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 129
Query: 464 DTESGECISRFT-SRKVAYCVKFHP----------DEDKQHLDIPVDMKYIADPTMHS-- 510
DT + +C++ F+ S A V F+P D+ + D+ V+ K + +HS
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQHYQVHSGG 188
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+ ++ P+ +L S D + I L + T +GH G ++ FS
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIY---TLQGH--TGPVFTVSFSKGGELF 243
Query: 571 ISGDADGKCYIW 582
SG AD + +W
Sbjct: 244 ASGGADTQVLLW 255
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 57/220 (25%), Positives = 97/220 (44%)
Query: 419 LWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK 478
LW +K H Y GH+ V + F+ G SA DR ++LW + S F +
Sbjct: 2 LWN-FKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 479 VAY-CVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSS-PNNKWLACQ--SMDNKILI 534
V F D Q L + K I +M+ + S + W+ C S D ++++
Sbjct: 61 APVRSVDF--SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 535 FSALNR-FKL----NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKL 589
+ ++ K+ N++ G+A +DF+P + + S +D +WD + KL
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 590 FKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQD 627
+ ++ H G CIS +HP + ++TA D T K+ D
Sbjct: 179 LQHYQVHSGGVNCIS--FHP-SGNYLITASSDG-TLKILD 214
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 168 (64.2 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 70/327 (21%), Positives = 136/327 (41%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
T +HT +GHT + A+ + P A ++ + SMD V++W+ K + GH
Sbjct: 182 TPLHTLKGHTSWVLAVSYSPNGA-MIATGSMDNTVRIWDAKKGQALGAPLKGH------- 233
Query: 386 CFNNTGTNFISAIRWFP----KSAH-LLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+I+++ W P +S H L S S D V++W+V + + GH+ +V
Sbjct: 234 ------VKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADI-VLSGHKGSVT 286
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK-----VAYCVKF-----HPDED 490
+ + TG + S+ +DR +K+W++++G I ++ +A F + D
Sbjct: 287 CVRWGGTGKIYTSS-HDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHT 345
Query: 491 KQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
+ + D +A + + K L S D + ++ + K +
Sbjct: 346 GKVPESDADKVAMAKKRFEKAATINNKIVEK-LVSASDDFTMYLWDPESSSKPVARLL-- 402
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEP 610
GH + FSPDM+Y+ S D +W+ + K + H G +
Sbjct: 403 GHQKE--VNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSAD-- 458
Query: 611 SKVVTAGWDAATAKVQDANIVKIAVEM 637
S+++ + T KV + K++ ++
Sbjct: 459 SRLLVSSSKDTTLKVWNVRTGKLSEDL 485
Score = 161 (61.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 75/308 (24%), Positives = 131/308 (42%)
Query: 332 EGHTKGISAIRWFP----KSAH-LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
+GH K I+++ W P +S H L S S D V++W+V +R + GH+ +V +
Sbjct: 231 KGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADI-VLSGHKGSVTCVR 289
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
+ TG + S+ H D +K+W + ++T H V + +
Sbjct: 290 WGGTGKIYTSS--------H-------DRTIKVWNS-QTGTLIQTLSAHAHRVNHLALS- 332
Query: 447 TGTNFI--SAGYDRYLKLWDTESGECI---SRFT-----SRKVAYCVKFHPDEDKQHL-D 495
T+FI +A +D K+ ++++ + RF + K+ + D+ +L D
Sbjct: 333 --TDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWD 390
Query: 496 IPVDMKYIADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHM 553
K +A H VT SP+ ++A DN + +++ + + T GH+
Sbjct: 391 PESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFIT---TLRGHV 447
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
A Y C FS D L+S D +W+ +T KL + H + W P + KV
Sbjct: 448 GAVYQCC--FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP-DGQKV 504
Query: 614 VTAGWDAA 621
+ G D A
Sbjct: 505 GSGGKDKA 512
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 164 (62.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F S L+ + + +KLW++ +E + VRT GHR + F+ G F S
Sbjct: 67 FDASEVLVAAGAASGTIKLWDL-EEAKIVRTLTGHRSNCISVDFHPFGEFFASG------ 119
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S+D +K+W++ K+ C+ TY GH + V + F G +S G D +K+W
Sbjct: 120 --------SLDTNLKIWDIRKKG-CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Query: 464 DTESGECISRFTSRK-VAYCVKFHPDE 489
D +G+ ++ F S + + FHP E
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Score = 144 (55.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/199 (25%), Positives = 85/199 (42%)
Query: 403 KSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKL 462
KS+ +L++ D +V LW + K + + + YGH + + F+ + + +KL
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPN-AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKL 85
Query: 463 WDTESGECISRFTS-RKVAYCVKFHPDED---KQHLDIPVDMKYIADP-TMHSMPAVTS- 516
WD E + + T R V FHP + LD + + I +H+ T
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
Query: 517 ------SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+P+ +W+ DN + ++ L KL + F+ H G SLDF P L
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLTE--FKSH--EGQIQSLDFHPHEFLL 200
Query: 571 ISGDADGKCYIWDWKTTKL 589
+G AD WD +T +L
Sbjct: 201 ATGSADRTVKFWDLETFEL 219
Score = 118 (46.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
S S+D +K+W++ K + C+ TY GH + V + F G RW ++S
Sbjct: 118 SGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDG-------RW-------VVSGG 162
Query: 413 MDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECIS 472
D VK+W++ + + + H ++ + F+ + DR +K WD E+ E I
Sbjct: 163 EDNIVKVWDL-TAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIG 221
Query: 473 RFTSRKVAY-CVKFHPD 488
C+ F+PD
Sbjct: 222 SGGPETAGVRCLSFNPD 238
Score = 58 (25.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 690 RNEIKN--GSVLRLAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMR 747
RN++KN GS+ ++A +A TAD +L ++++N L + LL +
Sbjct: 699 RNDVKNSIGSIEKMADNAV-TAD-VLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHL 756
Query: 748 ATTEDFV-KVFSVVREQITRALSSQPASL 775
+ + D + K+ + I +LS+ PAS+
Sbjct: 757 SVSLDLLLKLVRLYGSPIYSSLSA-PASV 784
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 169 (64.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 43/172 (25%), Positives = 81/172 (47%)
Query: 321 CFLPKTQ-VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHR 379
C + +T+ T+ GH ++ ++W P + LL SCS D K+W + K+ V H
Sbjct: 433 CKIGETRPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNI-KQSTFVHDLREHT 490
Query: 380 QAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAV 439
+ + I ++ TG + P L S S D VKLW+ + + + ++ GHR+ V
Sbjct: 491 KEIYTIRWSPTGPGTNN-----PNKQLTLASASFDSTVKLWDA-ELGKMLCSFNGHREPV 544
Query: 440 RDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDK 491
+ F+ G S D+ + +W + G+ + +T + V ++ + +K
Sbjct: 545 YSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNK 596
Score = 124 (48.7 bits), Expect = 0.00059, P = 0.00059
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 316 TPPDRC-FLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-RCVR 373
TP + +P + V EGHT + A W P SA LL S S D ++W + + + V
Sbjct: 245 TPTSQTSHIPNSDVRILEGHTSEVCACAWSP-SASLLASGSGDATARIWSIPEGSFKAVH 303
Query: 374 TYYGHRQAVRDICF--NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
T + +N + ++ + W + LL + S D + ++W + E + T
Sbjct: 304 TGRNINALILKHAKGKSNEKSKDVTTLDWNGEGT-LLATGSCDGQARIWTLNGE--LIST 360
Query: 432 YYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
H+ + + +N G ++ DR +WD ++ E +F
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQF 403
Score = 123 (48.4 bits), Expect = 0.00076, P = 0.00076
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 326 TQVHTWEGHTKGISAIRWFPK-------SAHLLL-SCSMDCRVKLWEVYKERRCVRTYYG 377
T VH HTK I IRW P + L L S S D VKLW+ + + + ++ G
Sbjct: 481 TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDA-ELGKMLCSFNG 539
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
HR+ V + F+ G +I+ S S+D + +W + KE + V+TY G+
Sbjct: 540 HREPVYSLAFSPNG-EYIA-------------SGSLDKSIHIWSI-KEGKIVKTYTGNG- 583
Query: 438 AVRDICFNNTGTNFISA 454
+ ++C+N G N I+A
Sbjct: 584 GIFEVCWNKEG-NKIAA 599
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 169 (64.5 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 75/291 (25%), Positives = 120/291 (41%)
Query: 302 LHPPHDVGTNLRSDTPPDRCFLPKTQVH-TWEGHTKGISAIRWFPKSAHLLLSCSMDCRV 360
+HP D + D LP+ V T GHT +S + P + L S S D +
Sbjct: 368 MHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATS-SGDSTI 426
Query: 361 KLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW 420
KLW++ K C T GH AV +++ G +F++ S S+D K+W
Sbjct: 427 KLWDLNKGE-CTLTLEGHNHAVWSCTWHSCG-DFVA-------------SASLDMTSKIW 471
Query: 421 EVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECI-SRFTSRKV 479
+V E RC T YGH +V I F ++A D+ L +WD +G+C S +
Sbjct: 472 DVNSE-RCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS 530
Query: 480 AYCVKFHPDEDKQHLDIPVDMKYIAD--PTMHSMPAVTSS--PNNKWLACQSMDNKILIF 535
F P + H+ D + + +P V+ P++ ++L
Sbjct: 531 VNDATFTP---RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQ 587
Query: 536 SALNRF-KLNRKKTFEGHMVAGYAC---SLDFSPDMSYLISGDADGKCYIW 582
++ N L K+ + H + G+ S+ FS L SG +DG +W
Sbjct: 588 ASANGIIHLLDLKSGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 167 (63.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 64/252 (25%), Positives = 108/252 (42%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F +LL S S D V+LW + +R + H VR + F+ G
Sbjct: 68 FSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADG------------ 114
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
L + S D +K+W +Y++ R + + Y H VR F+ G +S D+ +K+W
Sbjct: 115 --QFLATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 464 DTESGECISRFT-SRKVAYCVKFHP----------DEDKQHLDIPVDMKYIADPTMHS-- 510
DT + +C++ F+ S A V F+P D+ + D+ V+ K + +HS
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQHYQVHSGG 230
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+ ++ P+ +L S D + I L + T +GH G ++ FS
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIY---TLQGH--TGPVFTVSFSKGGELF 285
Query: 571 ISGDADGKCYIW 582
SG AD + +W
Sbjct: 286 ASGGADTQVLLW 297
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 60/231 (25%), Positives = 102/231 (44%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
L + S D + LW +K H Y GH+ V + F+ G SA DR ++LW +
Sbjct: 33 LATASWDTFLMLWN-FKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK 91
Query: 468 GECISRFTSRKVAY-CVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSS-PNNKWLAC 525
S F + V F D Q L + K I +M+ + S + W+ C
Sbjct: 92 RGKFSEFKAHTAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRC 149
Query: 526 Q--SMDNKILIFSALNR-FKL----NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGK 578
S D ++++ + ++ K+ N++ G+A +DF+P + + S +D
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 579 CYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQD 627
+WD + KL + ++ H G CIS +HP + ++TA D T K+ D
Sbjct: 210 VKVWDVRVNKLLQHYQVHSGGVNCIS--FHP-SGNYLITASSDG-TLKILD 256
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 66/281 (23%), Positives = 108/281 (38%)
Query: 331 WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNT 390
++GH I+++ P L + S D + LW R R Y GH+ V + F+
Sbjct: 14 FKGHKAAITSLDLSPNGKQLA-TASWDTFLMLWNFKPHARAYR-YVGHKDVVTSVQFSPH 71
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
G +LL S S D V+LW K + + H VR + F+ G
Sbjct: 72 G--------------NLLASASRDRTVRLWIPDKRGK-FSEFKAHTAPVRSVDFSADGQF 116
Query: 451 FISAGYDRYLKLWDTESGECI-SRFTSRKVAYCVKFHPD--------EDKQHLDIPVDMK 501
+A D+ +K+W + S + C KF PD EDK K
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 502 YIADPTMHSMPA---VTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGY 557
+ S+ V +P+ +A D + ++ ++N+ + ++ H G
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV----RVNKLLQHYQVHS-GGV 231
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
C + F P +YLI+ +DG I D +L + H G
Sbjct: 232 NC-ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 166 (63.5 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 76/290 (26%), Positives = 124/290 (42%)
Query: 328 VHTWEGHTKGISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLLS SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-------------V 429
I + +GT F S W K + + D ++ E R V
Sbjct: 193 DSIAVDGSGTKFCSG-SW-DKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPV 250
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T GH +AV + +++ SA +D +++WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHMEAVSSVLWSDA-EEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKWLACQSMD---NKILIFSAL-NRFK 542
K+ D + DP S+ +++ + + W+ + LI +L N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ D L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-DTGLLLSGGADNKLYSYRYSPT 417
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 392 TNFISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLLS SMD + LWE E V+ + GH +V I +
Sbjct: 140 TDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDG 199
Query: 447 TGTNFISAGYDRYLKLWDT---ESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
+GT F S +D+ LK+W T + + + T+R P + ++ + + +
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNR---------PRKKQKTEQLGLTRTPV 250
Query: 504 ADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
+ H M AV+S + + + S D+ I ++ + + K T G+ V + C +
Sbjct: 251 VTLSGH-MEAVSSVLWSDAEEICSASWDHTIRVWDVESG---SLKSTLTGNKV--FNC-I 303
Query: 562 DFSPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGW 618
+SP L SG D +WD +T + + +H G S W P ++++
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 619 DAATAKVQDANIVKIAVEMEKQVPQLYQF--NQTLTLSSIIQEICSGWSLS---DSEQYA 673
D NIVK+ + P LY ++ LS + +G LS D++ Y+
Sbjct: 364 D---------NIVKLWDTRSCKAP-LYDLAAHEDKVLS--VDWTDTGLLLSGGADNKLYS 411
Query: 674 LQFSETNN 681
++S T +
Sbjct: 412 YRYSPTTS 419
Score = 131 (51.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H IS+I+ + +L+ S D ++W + E + + T GH V+D+
Sbjct: 100 HDDWISSIKG---AEEWILTGSYDKTSRIWSL--EGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLLS SMD + LWE E V+ + GH +V I + +G
Sbjct: 148 ------WVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSG 201
Query: 449 TNFISAGYDRYLKLWDT 465
T F S +D+ LK+W T
Sbjct: 202 TKFCSGSWDKMLKIWST 218
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 167 (63.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 76/334 (22%), Positives = 130/334 (38%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + +V LW+ + RT GH + +
Sbjct: 146 ETPHFTCKGHRHWVLSISWSPDGKKLASGCK-NGQVLLWDPSTGLQVGRTLTGHSKWI-- 202
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
TG ++ + P+ ++ S S D V++W+ RC R GH Q+V + +
Sbjct: 203 -----TGLSW-EPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGHTQSVTCLRW 254
Query: 445 NNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPDEDKQ 492
G + SA DR +K+W G C + + Y ++ F P E
Sbjct: 255 GGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATV 313
Query: 493 HL-DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ +K + + V + L S D + ++S K + T G
Sbjct: 314 NAQDLQGSLKELKERASSRYNLVRGQGPER-LVSGSDDFTLFLWSPAEDKKPLARMT--G 370
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H + FSPD + S D +WD +T K + H W S
Sbjct: 371 HQAL--INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD--S 426
Query: 612 KVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
+++ +G +T KV D K+A ++ ++Y
Sbjct: 427 RLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVY 460
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 85/319 (26%), Positives = 125/319 (39%)
Query: 324 PKT--QV-HTWEGHTKGISAIRWFP----KSAHLLLSCSMDCRVKLWEVYKERRCVRTYY 376
P T QV T GH+K I+ + W P + S S D V++W+ RC R
Sbjct: 185 PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT-TAGRCERILT 243
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
GH Q+V C +RW LL S S D +K+W + C RT GH
Sbjct: 244 GHTQSVT--C-----------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHG 287
Query: 437 QAVRDICFNN-----TGTNFISAGYDRYLKLWDTESG--ECISRFTSR------KVAYCV 483
V + + TG F A + + D + E R +SR + +
Sbjct: 288 HWVNTMALSTDYALRTGA-FEPA--EATVNAQDLQGSLKELKERASSRYNLVRGQGPERL 344
Query: 484 KFHPDEDKQHLDIPV-DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNR 540
D+ L P D K +A T H + V SP+++ +A S D I ++
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 541 FKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVC 600
L + GH+ A Y + +S D L+SG +D +WD K KL H
Sbjct: 405 KYL---ASLRGHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEV 459
Query: 601 ISTLWHPHEPSKVVTAGWD 619
+ W P + +V + G D
Sbjct: 460 YAVDWSP-DGQRVASGGKD 477
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 178 (67.7 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 70/277 (25%), Positives = 114/277 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED------KQHLDIPVDM---KYI 503
D +KLWD C+ R+ A C++F PD H D+ K +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 504 ADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
++ H+ P V PN LA S D I + L +F++ EG G S+
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD-LEKFQV--VSCIEGE--PGPVRSI 237
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
F+PD L SG D ++ W+ + F H G
Sbjct: 238 LFNPDGCCLYSGCQDS-LRVYGWEPERCFDVVLVHWG 273
Score = 159 (61.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
SG +D WD + ++ + G S L++P
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNP 241
Score = 40 (19.1 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 665 SLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLR 700
++ +++ + FS++N +Y+ + R + G+V R
Sbjct: 279 AICNNQLIGVAFSQSNVSSYVVDLTR-VTRTGTVAR 313
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 163 (62.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 71/274 (25%), Positives = 114/274 (41%)
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCV----RTYYGHRQAVRDICFNNT 447
T+ ++AI ++ ++++ S D + LW++ KE + R GH V+D+ ++
Sbjct: 15 TDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSD 74
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPDEDKQHLDIPVDM------ 500
G +S +D L+LWD +GE RF K V F D ++Q + D
Sbjct: 75 GQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD-NRQIVSASRDRTIKLWN 133
Query: 501 -----KY-IADPTMHS--MPAVTSSPNN--KWLACQSMDNKILIFSALNRFKLNRKKTFE 550
KY I++ H + V SPN + S D + +++ L KL + T
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-LQNCKL--RNTLA 190
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHD---GVCIST--LW 605
GH +GY ++ SPD S SG DG +WD K +A +C S W
Sbjct: 191 GH--SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYW 248
Query: 606 HPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEK 639
+ WD + V + V + E EK
Sbjct: 249 LCAATENSIRI-WDLESKSVVEDLKVDLKAEAEK 281
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 69/282 (24%), Positives = 118/282 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCV----RTYYGHRQAVRDICFNN 389
HT ++AI ++ ++++ S D + LW++ KE + R GH V+D+ ++
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 390 TGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGT 449
G LS S D ++LW++ R + GH + V + F+
Sbjct: 74 DG--------------QFALSGSWDGELRLWDL-ATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 450 NFISAGYDRYLKLWDTESGEC---ISRFTSRKV-AYCVKFHPDEDKQHL-----DIPVDM 500
+SA DR +KLW+T GEC IS K CV+F P+ + D V +
Sbjct: 119 QIVSASRDRTIKLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 501 KYIADPTM------HS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
+ + + HS + V SP+ A D IL++ KL + G
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA--GS 235
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWK 594
++ SL FSP+ +L + + IWD ++ + + K
Sbjct: 236 IIH----SLCFSPNRYWLCAA-TENSIRIWDLESKSVVEDLK 272
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 166 (63.5 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 61/231 (26%), Positives = 103/231 (44%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
L + S D + LW +K H Y GH+ V + F+ G SA DR ++LW +
Sbjct: 33 LATASWDTFLMLWN-FKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK 91
Query: 468 GECISRFTSRKVAY-CVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSS-PNNKWLAC 525
S F + V F D Q L + K I +M+ + S + W+ C
Sbjct: 92 RGKFSEFKAHTAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRC 149
Query: 526 Q--SMDNKILIFSALNR-FKL----NRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGK 578
S D ++++ + ++ K+ N++ G+A +DF+P + + S +D
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 579 CYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQD 627
+WD + KL + ++ H G CIS +HP + + +VTA D T K+ D
Sbjct: 210 VKVWDVRVNKLLQHYQVHSGGVNCIS--FHPSD-NYLVTASSDG-TLKILD 256
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 65/281 (23%), Positives = 108/281 (38%)
Query: 331 WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNT 390
++GH I+++ P L + S D + LW R R Y GH+ V + F+
Sbjct: 14 FKGHKAAITSLDLSPNGKQLA-TASWDTFLMLWNFKPHARAYR-YVGHKDVVTSVQFSPH 71
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
G +LL S S D V+LW K + + H VR + F+ G
Sbjct: 72 G--------------NLLASASRDRTVRLWIPDKRGK-FSEFKAHTAPVRSVDFSADGQF 116
Query: 451 FISAGYDRYLKLWDTESGECI-SRFTSRKVAYCVKFHPD--------EDKQHLDIPVDMK 501
+A D+ +K+W + S + C KF PD EDK K
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 502 YIADPTMHSMPA---VTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGY 557
+ S+ V +P+ +A D + ++ ++N+ + ++ H G
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV----RVNKLLQHYQVHS-GGV 231
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
C + F P +YL++ +DG I D +L + H G
Sbjct: 232 NC-ISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTG 271
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 64/252 (25%), Positives = 110/252 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F +LL S S D V+LW + ++ + + H VR + F+ G
Sbjct: 68 FSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADG------------ 114
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
LL++ S D +K+W ++++ R + + Y H VR F+ G +S D+ +K+W
Sbjct: 115 --QLLVTASEDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 464 DTESGECISRFT-SRKVAYCVKFHPD------EDKQHL----DIPVDMKYIADPTMHS-- 510
DT + +C++ F+ S A V F+P+ H DI ++ K + +HS
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN-KLLQHYQVHSCG 230
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+ ++ P L S D + + + + T +GH G ++ FS D L
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIY---TLQGH--TGPVFTVSFSKDGELL 285
Query: 571 ISGDADGKCYIW 582
SG AD + IW
Sbjct: 286 TSGGADAQVLIW 297
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 64/241 (26%), Positives = 104/241 (43%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + + + S D + LW + K H Y GH+ V + F+ G SA DR +
Sbjct: 26 FSPNCKQIATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTV 84
Query: 461 KLWDTESGECISRFTSRKVAY-CVKFHPD--------EDKQ-HLDIPVDMKYIADPTMHS 510
+LW + S F + V F D EDK + +++ H+
Sbjct: 85 RLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHT 144
Query: 511 --MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
+ SP+ + + S D I I+ N+ +N F + G+A +DF+P+ +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSDSV--GFANFVDFNPNGT 199
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD-GV-CISTLWHPHEPSKVVTAGWDAATAKVQ 626
+ S +D IWD + KL + ++ H GV C+S +HP S +VTA D T K+
Sbjct: 200 CIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLS--FHPLGNS-LVTASSDG-TVKML 255
Query: 627 D 627
D
Sbjct: 256 D 256
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/290 (25%), Positives = 124/290 (42%)
Query: 328 VHTWEGHTKGISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLLS SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-------------V 429
I + +GT F S W K + + D ++ E R +
Sbjct: 193 DSIAVDGSGTKFCSG-SW-DKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPI 250
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T GH +AV + +++ SA +D +++WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHMEAVSSVLWSDA-EEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKWLACQSMD---NKILIFSAL-NRFK 542
K+ D + DP S+ +++ + + W+ + LI +L N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ D L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-DTGLLLSGGADNKLYSYRYSPT 417
Score = 151 (58.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 76/308 (24%), Positives = 133/308 (43%)
Query: 392 TNFISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLLS SMD + LWE E V+ + GH +V I +
Sbjct: 140 TDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDG 199
Query: 447 TGTNFISAGYDRYLKLWDT---ESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
+GT F S +D+ LK+W T + + + T+R P + ++ + + I
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNR---------PRKKQKTEQLGLTRTPI 250
Query: 504 ADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
+ H M AV+S + + + S D+ I ++ + + K T G+ V + C +
Sbjct: 251 VTLSGH-MEAVSSVLWSDAEEICSASWDHTIRVWDVESG---SLKSTLTGNKV--FNC-I 303
Query: 562 DFSPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGW 618
+SP L SG D +WD +T + + +H G S W P ++++
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 619 DAATAKVQDANIVKIAVEMEKQVPQLYQF--NQTLTLSSIIQEICSGWSLS---DSEQYA 673
D NIVK+ + P LY ++ LS + +G LS D++ Y+
Sbjct: 364 D---------NIVKLWDTRSCKAP-LYDLAAHEDKVLS--VDWTDTGLLLSGGADNKLYS 411
Query: 674 LQFSETNN 681
++S T +
Sbjct: 412 YRYSPTTS 419
Score = 131 (51.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H IS+I+ + +L+ S D ++W + E + + T GH V+D+
Sbjct: 100 HDDWISSIKG---AEEWILTGSYDKTSRIWSL--EGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLLS SMD + LWE E V+ + GH +V I + +G
Sbjct: 148 ------WVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSG 201
Query: 449 TNFISAGYDRYLKLWDT 465
T F S +D+ LK+W T
Sbjct: 202 TKFCSGSWDKMLKIWST 218
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/338 (22%), Positives = 131/338 (38%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ ++ R GH
Sbjct: 146 ETPHFTCQGHRHWVLSISWSPDGKKLASGCK-NGQILLWDPSTGKQVGRALAGH------ 198
Query: 385 ICFNNTGTNFISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+ +I+A+ W P A+ + S S D V++W+ RC R GH Q+V
Sbjct: 199 -------SKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQSVT 250
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPD 488
+ + G + SA DR +K+W G C + + Y ++ F P
Sbjct: 251 CLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPA 309
Query: 489 EDKQHL-DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKK 547
E + D+ ++ + + + V + L S D + ++S K +
Sbjct: 310 EASVNAQDLRGSLQELKERALSRYNLVRGRGLER-LVSGSDDFTLFLWSPAEDKKPLARM 368
Query: 548 TFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
T GH + FSPD + S D +WD +T K + H W
Sbjct: 369 T--GHQAL--INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 608 HEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
S+++ +G +T KV D K+A ++ ++Y
Sbjct: 425 D--SRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVY 460
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 83/307 (27%), Positives = 123/307 (40%)
Query: 333 GHTKGISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
GH+K I+A+ W P A+ + S S D V++W+ RC R GH Q+V C
Sbjct: 197 GHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQSVT--C-- 251
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN-- 446
+RW LL S S D +K+W + C RT GH V + +
Sbjct: 252 ---------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDY 299
Query: 447 ---TGTNFISA-----GYDRYLKLWDTESGECISRFT---SRKVAYCVKFHPDEDKQHLD 495
TG F A D L + + +SR+ R + V D+ L
Sbjct: 300 ALRTGA-FEPAEASVNAQDLRGSLQELKE-RALSRYNLVRGRGLERLVS-GSDDFTLFLW 356
Query: 496 IPV-DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH 552
P D K +A T H + V SP+++ +A S D I ++ L + GH
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYL---ASLRGH 413
Query: 553 MVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSK 612
+ A Y + +S D L+SG +D +WD K KL H + W P + +
Sbjct: 414 VAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQR 470
Query: 613 VVTAGWD 619
V + G D
Sbjct: 471 VASGGKD 477
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/236 (27%), Positives = 108/236 (45%)
Query: 408 LLSCSMDCRVKLWEVYKEHRCVR-TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
+++ S+D VK+W+ E ++ T GH+ V + + G S+ D +++LWD E
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLE 94
Query: 467 SGECISRFTSRKV-AYCVKFHPDEDK----QHLDIPVDMKYI-ADPTMHSMP-------A 513
+G+ I + V A+ V F PD HL V++ + + HS+ +
Sbjct: 95 TGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG-KVNIFGVESGKKEHSLDTRGKFILS 153
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
+ SP+ K+LA ++D I IF L+ T EGH + SL FSPD L++
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMP--IRSLTFSPDSQLLVTA 208
Query: 574 DADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDAN 629
DG I+D + L H +S + P + + V++ D + KV D +
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD-THFVSSSSDKSI-KVWDTS 262
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 65/285 (22%), Positives = 127/285 (44%)
Query: 351 LLSCSMDCRVKLWEVYKERRCVR-TYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL 409
+++ S+D VK+W+ E+ ++ T GH+ V + + G I+A
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGA--IAA------------ 80
Query: 410 SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAG-YDRYLKLWDTESG 468
S S+D ++LW++ + + +++ + F+ + +I+ G + + ++ ESG
Sbjct: 81 SSSLDAHIRLWDL-ETGKQIKSMDAGPVDAWTVAFS-PDSKYIATGSHLGKVNIFGVESG 138
Query: 469 ECISRFTSR-KVAYCVKFHPDED---KQHLDIPVDMKYIADPTM------HSMP--AVTS 516
+ +R K + + PD +D +++ IA + H+MP ++T
Sbjct: 139 KKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 517 SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDAD 576
SP+++ L S D I I+ + N T GH + S+ FSPD ++ +S +D
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHA---NLAGTLSGH--GSWVLSVAFSPDDTHFVSSSSD 253
Query: 577 GKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAA 621
+WD + + H S ++P SK+V+AG D A
Sbjct: 254 KSIKVWDTSSRSCVNTFFDHQDQVWSVKYNP-TGSKIVSAGDDRA 297
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + LL++ S D +K+++V + T GH V + F+ T+F+S+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDV-QHANLAGTLSGHGSWVLSVAFSPDDTHFVSS------ 250
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S D +K+W+ CV T++ H+ V + +N TG+ +SAG DR + ++
Sbjct: 251 --------SSDKSIKVWDT-SSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Query: 464 D 464
D
Sbjct: 302 D 302
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 113 (44.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 329 HTWEGHTKGISAIRWFPK-SAHLLLSCSMDCR--VKLWEVYKERRCVRTYYGHRQAVRDI 385
H+++GH IS+++++ + ++ + L S D VK+W++ K R+C+ T H AVR +
Sbjct: 138 HSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVK-RKCLHTLQEHTSAVRGL 196
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC--VRTYYGHRQAVRDIC 443
N ++ LLS D + LW+ + +C ++T ++Q V
Sbjct: 197 DIIEVPDNDEPSLN--------LLSGGRDDIINLWDFNMKKKCKLLKTLPVNQQ-VESCG 247
Query: 444 F--NNTGTNFI-SAGYDRYLKLWDTESGECISRFTSRKV 479
F + G I +AG D +L D+ESG + R T++ +
Sbjct: 248 FLKDGDGKRIIYTAGGDAIFQLIDSESGSVLKR-TNKPI 285
Score = 108 (43.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 53/214 (24%), Positives = 93/214 (43%)
Query: 520 NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKC 579
+K LA S D + I+S L+ F + KT EGH A CS F LIS ADG
Sbjct: 545 DKLLATSSGDKTVKIWS-LDTFSV--MKTLEGHTNAVQRCS--FINKQKQLISCGADGLI 599
Query: 580 YIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEM 637
IWD + + K H+ +ST+ ++ +V+A D +D +I E
Sbjct: 600 KIWDCSSGECLKTLDGHNNRLWALSTM---NDGDMIVSADADGVFQFWKDCTEQEIEEEQ 656
Query: 638 EKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEKNRNEIKNGS 697
EK Q+ Q Q+L + + + L+ + + ++ + ++R + + G
Sbjct: 657 EKAKLQVEQ-EQSLQNYMSKGDWTNAFLLAMTLDHPMRLFNVLKRALGESRSRQDTEEGK 715
Query: 698 VLRLAFSASKTADDILSKLSDKNASLEEKTAAEF 731
+ + F+ + D +S L+D+ L K ++
Sbjct: 716 I-EVIFN--EELDQAISILNDEQLILLMKRCRDW 746
Score = 97 (39.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 39/169 (23%), Positives = 73/169 (43%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRC----VRTYYGH 378
LP V +EGH ++++ + + + S D +W Y E C Y GH
Sbjct: 377 LP-LDVEIYEGHEDLLNSLD-ATEDGLWIATASKDNTAIVWR-YNENSCKFDIYAKYIGH 433
Query: 379 RQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK-----EHRCVR--- 430
AV + N +S + +P+ LL+ S D +K W + K + + ++
Sbjct: 434 SAAVTAVGL----PNIVS--KGYPE---FLLTASNDLTIKKWIIPKPTASMDVQIIKVSE 484
Query: 431 -TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK 478
T + H + + + + + F +A YD+ K+W+ E+GE + + K
Sbjct: 485 YTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHK 533
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/252 (25%), Positives = 108/252 (42%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F +LL S S D V+LW + ++ + + H VR + F+ G
Sbjct: 68 FSPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADG------------ 114
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
L++ S D +K+W +Y++ R + + Y H VR F+ G +S D+ +K+W
Sbjct: 115 --QFLVTASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 464 DTESGECISRFT-SRKVAYCVKFHPD------EDKQHL----DIPVDMKYIADPTMHS-- 510
DT S +C++ F+ S A V F P+ H DI ++ + + +HS
Sbjct: 172 DTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN-RLLQHYQVHSCG 230
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+ ++ P+ L S D + I + + T +GH G ++ FS D
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIY---TLQGH--TGPVFTVSFSKDGELF 285
Query: 571 ISGDADGKCYIW 582
SG AD + +W
Sbjct: 286 TSGGADAQVLVW 297
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 62/238 (26%), Positives = 106/238 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + + + S D + LW + K H Y GH+ V + F+ G SA D+ +
Sbjct: 26 FSPNCKQIATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTV 84
Query: 461 KLWDTESGECISRFTSRKVAY-CVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSS-P 518
+LW + S F + V F D Q L + K I +M+ + S
Sbjct: 85 RLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQFLVTASEDKSIKVWSMYRQRFLYSLYR 142
Query: 519 NNKWLACQ--SMDNKILIFSALNR-FKL---NRKKTFEGHMVA-GYACSLDFSPDMSYLI 571
+ W+ C S D ++++ + ++ K+ K+ + G+A +DFSP+ + +
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIA 202
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHD-GV-CISTLWHPHEPSKVVTAGWDAATAKVQD 627
S +D IWD + +L + ++ H GV C+S +HP S +VTA D T K+ D
Sbjct: 203 SAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS--FHPSGNS-LVTASSDG-TVKILD 256
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 71/303 (23%), Positives = 120/303 (39%)
Query: 331 WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNT 390
++GH I++ + P + + S D + LW + R R Y GH+ V + F+
Sbjct: 14 FKGHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYR-YVGHKDVVTSLQFSPQ 71
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
G +LL S S D V+LW + ++ + + H VR + F+ G
Sbjct: 72 G--------------NLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 451 FISAGYDRYLKLWDTESGECI-SRFTSRKVAYCVKFHPD--------EDKQHLDIPVDMK 501
++A D+ +K+W + S + C KF PD EDK K
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 502 YIADPTMHSMPA---VTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGY 557
+ S+ V SPN +A D+ + I+ ++NR + ++ H G
Sbjct: 177 QCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD----IRMNRLLQHYQVHS-CGV 231
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAG 617
C L F P + L++ +DG I D +L + H G + T+ + + G
Sbjct: 232 NC-LSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGP-VFTVSFSKDGELFTSGG 289
Query: 618 WDA 620
DA
Sbjct: 290 ADA 292
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F +LL S S D ++LW + +R + H VR + F+ G
Sbjct: 68 FSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADG------------ 114
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
L S S D +K+W +Y++ R + + Y H VR F+ G +S D+ +K+W
Sbjct: 115 --QFLASASEDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 464 DTESGECISRFTSRK-VAYCVKFHPD------EDKQHL----DIPVDMKYIADPTMHS-- 510
DT + +C++ F+ A V F+P+ H DI V+ K + +HS
Sbjct: 172 DTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVN-KLLQHYQVHSGG 230
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+ V+ P+ +L S D + I L + T +GH G ++ FS
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEGRLIY---TLQGH--TGPVFTVSFSKGGELF 285
Query: 571 ISGDADGKCYIW 582
SG AD + +W
Sbjct: 286 TSGGADAQVLLW 297
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/310 (22%), Positives = 132/310 (42%)
Query: 395 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISA 454
I+++ + P L S D + LW + + R R Y GH+ + + F+ G SA
Sbjct: 21 ITSVDFSPNGKQLATG-SWDTFLMLWSLRPQARAFR-YVGHKDVITSVQFSPLGNLLASA 78
Query: 455 GYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPD--------EDKQHLDI--PVDMKYI 503
DR ++LW + S F + V F D EDK + + +++
Sbjct: 79 SRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS-IKVWNMYRQRFL 137
Query: 504 ADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
H+ + SP+ + + S D I I+ N+ +N F G+A +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF-----VGFANFV 192
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV--CISTLWHPHEPSKVVTAGWD 619
F+P+ + + S +D IWD + KL + ++ H G C+S +HP + ++TA D
Sbjct: 193 AFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS--FHP-SGNYLITASSD 249
Query: 620 AATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSET 679
T K+ D ++ ++ ++ T++ S + SG + + + F E
Sbjct: 250 G-TLKILDLLEGRLIYTLQGHTGPVF----TVSFSKGGELFTSGGADAQVLLWRTNFDEL 304
Query: 680 NNKNYITEKN 689
N K+ ++++N
Sbjct: 305 NYKD-VSKRN 313
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/281 (23%), Positives = 111/281 (39%)
Query: 331 WEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNT 390
++GH I+++ + P L S D + LW + + R R Y GH+ + + F+
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATG-SWDTFLMLWSLRPQARAFR-YVGHKDVITSVQFSPL 71
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
G +LL S S D ++LW K + + H VR + F+ G
Sbjct: 72 G--------------NLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 451 FISAGYDRYLKLWDTESGECI-SRFTSRKVAYCVKFHPD--------EDKQHLDIPVDMK 501
SA D+ +K+W+ + S + C KF PD EDK K
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 502 YIADPTMHSMPA---VTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMVAGY 557
+ + V +PN +A D+ + I+ ++N+ + ++ H G
Sbjct: 177 QCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD----IRVNKLLQHYQVHS-GGV 231
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
C + F P +YLI+ +DG I D +L + H G
Sbjct: 232 NC-VSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
>GENEDB_PFALCIPARUM|PF14_0456 [details] [associations]
symbol:PF14_0456 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348630.1
ProteinModelPortal:Q8IKZ5 EnsemblProtists:PF14_0456:mRNA
GeneID:812038 KEGG:pfa:PF14_0456 EuPathDB:PlasmoDB:PF3D7_1448000
HOGENOM:HOG000282087 OMA:WISSINT ProtClustDB:CLSZ2501072
Uniprot:Q8IKZ5
Length = 1275
Score = 160 (61.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 320 RCF-LPKTQV-HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
R F + K ++ T+ GHT GI ++ F ++ + L SCS D + LW++ ++ + G
Sbjct: 92 RLFDMEKNKILSTFSGHTSGICKLK-FNENGNYLCSCSKDTNIILWDIINDKGVFKLE-G 149
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H V DI F +++ ++L+S S DC +K+WE+ + CV+T +
Sbjct: 150 HTNVVTDIEFLQRKNDYLDDFL----DNNILISVSKDCLIKVWELNIQ-TCVQTIVDCEE 204
Query: 438 AVRDICFNNTGTNFISAGYDRYLKLW 463
+ + N T T I A + +LK++
Sbjct: 205 EITSLIINQTNTRLIVA-CNSFLKIY 229
Score = 64 (27.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
+D +++D +M SP+ K++ ++N I I + + KL+ T GH +
Sbjct: 844 IDCYHLSDKVSCAM----YSPDGKYICIGYLNNLIEILYS-DTLKLHL--TLYGHSLP-I 895
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKK 592
C +D S D L S AD ++W+ + + K+
Sbjct: 896 TC-MDISKDNKILASSGADKFIFLWNMEYGNVNKR 929
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAH 596
D S +IS D G Y+++ K +L +KAH
Sbjct: 674 DESLIIS-DECGYLYLYELKNIELKYTYKAH 703
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 667 SDSEQYALQFSETNNKNYITEKNRNEIKN 695
+++E+ F NY +R+E+ N
Sbjct: 789 NNNEREKKSFIHNKRSNYKKNSSRDELNN 817
>UNIPROTKB|Q8IKZ5 [details] [associations]
symbol:PF14_0456 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348630.1
ProteinModelPortal:Q8IKZ5 EnsemblProtists:PF14_0456:mRNA
GeneID:812038 KEGG:pfa:PF14_0456 EuPathDB:PlasmoDB:PF3D7_1448000
HOGENOM:HOG000282087 OMA:WISSINT ProtClustDB:CLSZ2501072
Uniprot:Q8IKZ5
Length = 1275
Score = 160 (61.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 320 RCF-LPKTQV-HTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYG 377
R F + K ++ T+ GHT GI ++ F ++ + L SCS D + LW++ ++ + G
Sbjct: 92 RLFDMEKNKILSTFSGHTSGICKLK-FNENGNYLCSCSKDTNIILWDIINDKGVFKLE-G 149
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQ 437
H V DI F +++ ++L+S S DC +K+WE+ + CV+T +
Sbjct: 150 HTNVVTDIEFLQRKNDYLDDFL----DNNILISVSKDCLIKVWELNIQ-TCVQTIVDCEE 204
Query: 438 AVRDICFNNTGTNFISAGYDRYLKLW 463
+ + N T T I A + +LK++
Sbjct: 205 EITSLIINQTNTRLIVA-CNSFLKIY 229
Score = 64 (27.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
+D +++D +M SP+ K++ ++N I I + + KL+ T GH +
Sbjct: 844 IDCYHLSDKVSCAM----YSPDGKYICIGYLNNLIEILYS-DTLKLHL--TLYGHSLP-I 895
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKK 592
C +D S D L S AD ++W+ + + K+
Sbjct: 896 TC-MDISKDNKILASSGADKFIFLWNMEYGNVNKR 929
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAH 596
D S +IS D G Y+++ K +L +KAH
Sbjct: 674 DESLIIS-DECGYLYLYELKNIELKYTYKAH 703
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 667 SDSEQYALQFSETNNKNYITEKNRNEIKN 695
+++E+ F NY +R+E+ N
Sbjct: 789 NNNEREKKSFIHNKRSNYKKNSSRDELNN 817
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 82/306 (26%), Positives = 123/306 (40%)
Query: 333 GHTKGISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
GH+K I+A+ W P A+ + S S D V++W+ RC RT GH Q+V C
Sbjct: 198 GHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERTLTGHAQSVT--C-- 252
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN-- 446
+RW LL S S D +K+W + C RT GH V + +
Sbjct: 253 ---------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDY 300
Query: 447 ---TGTNFISA-----GYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDI-- 496
TG F A D L + + +SR+ + + D L +
Sbjct: 301 ALRTGA-FEPAEASVNAQDLRGSLQELKE-RALSRYNLVRGQGPERLVSGSDDFTLFLWS 358
Query: 497 PV-DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHM 553
P D K +A T H + V SP+++ +A S D I ++ L + GH+
Sbjct: 359 PAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYL---ASLRGHV 415
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
A Y + +S D L+SG +D +WD K KL H + W P + +V
Sbjct: 416 AAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP-DGQRV 472
Query: 614 VTAGWD 619
+ G D
Sbjct: 473 ASGGKD 478
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ ++ R GH
Sbjct: 147 ETPHFTCQGHRHWVLSISWSPDGKKLASGCK-NGQILLWDPSTGKQVGRALTGH------ 199
Query: 385 ICFNNTGTNFISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+ +I+A+ W P A+ + S S D V++W+ RC RT GH Q+V
Sbjct: 200 -------SKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERTLTGHAQSVT 251
Query: 441 DICFNNTGTNFISAGYDRYLKLWDTESG 468
+ + G + SA DR +K+W G
Sbjct: 252 CLRWGGDGLLY-SASQDRTIKVWRAHDG 278
>WB|WBGene00000426 [details] [associations]
symbol:ced-12 species:6239 "Caenorhabditis elegans"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis"
evidence=IEA] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0007015 "actin filament organization" evidence=IDA] [GO:0030334
"regulation of cell migration" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0017124 "SH3 domain binding" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0070273 "phosphatidylinositol-4-phosphate binding"
evidence=IDA] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=IDA] [GO:0017048 "Rho GTPase binding"
evidence=IPI] InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727
PROSITE:PS51335 GO:GO:0005886 GO:GO:0005737 GO:GO:0006915
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016477
GO:GO:0007015 GO:GO:0005856 GO:GO:0017124 GO:GO:0030334
GO:GO:0031532 GO:GO:0005547 GO:GO:0043652 GO:GO:0080025
GO:GO:0070273 GO:GO:0035262 eggNOG:NOG295208 HOGENOM:HOG000111532
GO:GO:0060097 EMBL:AF416781 EMBL:AF324505 EMBL:AL032656
RefSeq:NP_492693.1 UniGene:Cel.6169 ProteinModelPortal:Q8STE5
SMR:Q8STE5 IntAct:Q8STE5 MINT:MINT-219526 STRING:Q8STE5
PaxDb:Q8STE5 EnsemblMetazoa:Y106G6E.5.1 EnsemblMetazoa:Y106G6E.5.2
GeneID:172890 KEGG:cel:CELE_Y106G6E.5 UCSC:Y106G6E.5.1 CTD:34633
WormBase:Y106G6E.5 GeneTree:ENSGT00390000014155 InParanoid:Q8STE5
KO:K12366 OMA:EIWREEQ NextBio:877415 InterPro:IPR024574
Pfam:PF11841 Uniprot:Q8STE5
Length = 731
Score = 167 (63.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 711 DILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSS 770
D L +L S E A F CI + L ++TW+EM+A + KV VV EQ+ L
Sbjct: 429 DELDRLIVVLFSTETPFPAVFACI-VHLFHRTWREMQAKGGEMEKVACVVLEQLRHVLKR 487
Query: 771 QPAS-LDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQ 829
+ +++ A++ +Y + +W++E+ +E + H++ +++LK + P++ +L++
Sbjct: 488 REIQDVEELSADLETFSYRAMQEIWREEQLGKENIQLHSEAVIQLKSKLRPKMEELVRIN 547
Query: 830 RLGYLVEGTRFTK 842
L YL G F K
Sbjct: 548 HLNYLKLGAVFRK 560
>UNIPROTKB|Q8STE5 [details] [associations]
symbol:ced-12 "Cell death abnormality protein 12"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0035262 "gonad
morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0060097 "cytoskeletal rearrangement involved in
phagocytosis, engulfment" evidence=IMP] [GO:0031532 "actin
cytoskeleton reorganization" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0070064 "proline-rich region binding" evidence=IPI]
InterPro:IPR006816 InterPro:IPR016024 Pfam:PF04727 PROSITE:PS51335
GO:GO:0005886 GO:GO:0005737 GO:GO:0006915 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016477 GO:GO:0007015
GO:GO:0005856 GO:GO:0017124 GO:GO:0030334 GO:GO:0031532
GO:GO:0005547 GO:GO:0043652 GO:GO:0080025 GO:GO:0070273
GO:GO:0035262 eggNOG:NOG295208 HOGENOM:HOG000111532 GO:GO:0060097
EMBL:AF416781 EMBL:AF324505 EMBL:AL032656 RefSeq:NP_492693.1
UniGene:Cel.6169 ProteinModelPortal:Q8STE5 SMR:Q8STE5 IntAct:Q8STE5
MINT:MINT-219526 STRING:Q8STE5 PaxDb:Q8STE5
EnsemblMetazoa:Y106G6E.5.1 EnsemblMetazoa:Y106G6E.5.2 GeneID:172890
KEGG:cel:CELE_Y106G6E.5 UCSC:Y106G6E.5.1 CTD:34633
WormBase:Y106G6E.5 GeneTree:ENSGT00390000014155 InParanoid:Q8STE5
KO:K12366 OMA:EIWREEQ NextBio:877415 InterPro:IPR024574
Pfam:PF11841 Uniprot:Q8STE5
Length = 731
Score = 167 (63.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 711 DILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVVREQITRALSS 770
D L +L S E A F CI + L ++TW+EM+A + KV VV EQ+ L
Sbjct: 429 DELDRLIVVLFSTETPFPAVFACI-VHLFHRTWREMQAKGGEMEKVACVVLEQLRHVLKR 487
Query: 771 QPAS-LDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQ 829
+ +++ A++ +Y + +W++E+ +E + H++ +++LK + P++ +L++
Sbjct: 488 REIQDVEELSADLETFSYRAMQEIWREEQLGKENIQLHSEAVIQLKSKLRPKMEELVRIN 547
Query: 830 RLGYLVEGTRFTK 842
L YL G F K
Sbjct: 548 HLNYLKLGAVFRK 560
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 166 (63.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 83/333 (24%), Positives = 140/333 (42%)
Query: 282 LEEKTILHIKDPTDYQGRSFLH-PPHDVGTNLRSDTPP--D---------RCFLPKTQVH 329
L+E LH + D R ++ PPH G ++ S+ D R LP ++
Sbjct: 260 LKEFRKLHEPNAEDAPSRDYIPLPPHK-GVDILSEVEAVKDWSKRLHLGPRASLPSVCMY 318
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSM-DCRVKLWEVYKERRCVRTYYGHRQAVRDI-CF 387
T+ ++ + P S +++C + ++LW + +++ + + +
Sbjct: 319 TFHHTNNNMNCAEFSPDST--MIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLL 376
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+++G + + P + +LL SCS D +LW V + V Y GH V D+ F
Sbjct: 377 SHSGP--VYGTTFSPDNKYLL-SCSEDASARLWSVDTKTALV-AYKGHTGPVWDVAFGPF 432
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPDE--------DKQHLDIPV 498
G F +A +D+ +LW + + F CV FHP+ DK V
Sbjct: 433 GHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Query: 499 DMKY-IADPTMHSMP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRK-KTFEGHMV 554
+ + H+ P AV +P+ +A S D++ LI L R+ KT GH
Sbjct: 493 HRGHSVRVFNGHTQPVTAVAIAPDGHTMA--SADSEGLIH--LWDIGTGRRIKTMRGHR- 547
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWD-WKT 586
G SL FS + + L+SG +D WD +KT
Sbjct: 548 -GNIYSLSFSRESTVLVSGGSDCTVRAWDVFKT 579
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 74/290 (25%), Positives = 125/290 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLLS SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRC-------------V 429
I ++TGT F S W K + + D ++ E R +
Sbjct: 193 DSIAVDSTGTRFCSG-SW-DKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPI 250
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
T GH++A+ + +++ SA +D + +WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHKEAISSVLWSDA-EEICSASWDHTIGVWDVESGSLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKWLACQSMD---NKILIFSAL-NRFK 542
K+ D + DP S+ +++ + + W+ + LI +L N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ + L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-NTGLLLSGGADNKLYSYRYSPT 417
Score = 148 (57.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 392 TNFISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLLS SMD + LWE E V+ + GH +V I ++
Sbjct: 140 TDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDS 199
Query: 447 TGTNFISAGYDRYLKLWDT---ESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
TGT F S +D+ LK+W T + + + T+R P + ++ + + I
Sbjct: 200 TGTRFCSGSWDKMLKIWSTVPTDEEDEMEESTNR---------PRKKQKTEQLGLTRTPI 250
Query: 504 ADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
+ H A++S + + + S D+ I ++ + + K T G+ V + C +
Sbjct: 251 VTLSGHK-EAISSVLWSDAEEICSASWDHTIGVWDVESG---SLKSTLTGNKV--FNC-I 303
Query: 562 DFSPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGW 618
+SP L SG D +WD +T + + +H G S W P ++++
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 619 DAATAKVQDANIVKIAVEMEKQVPQLYQF--NQTLTLSSIIQEICSGWSLS---DSEQYA 673
D NIVK+ + P LY ++ LS + +G LS D++ Y+
Sbjct: 364 D---------NIVKLWDTRSCKAP-LYDLAAHEDKVLS--VDWTNTGLLLSGGADNKLYS 411
Query: 674 LQFSETNN 681
++S T +
Sbjct: 412 YRYSPTTS 419
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/137 (31%), Positives = 62/137 (45%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H ISAI + +L+ S D ++W E + + T GH V+D+
Sbjct: 100 HDDWISAIEG---AEEWILTGSYDKTSRIWS--SEGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLLS SMD + LWE E V+ + GH +V I ++TG
Sbjct: 148 ------WVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTG 201
Query: 449 TNFISAGYDRYLKLWDT 465
T F S +D+ LK+W T
Sbjct: 202 TRFCSGSWDKMLKIWST 218
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 70/334 (20%), Positives = 130/334 (38%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ + R GH + +
Sbjct: 159 ETPQFTAKGHRHWVLSIAWSPDGKKLASGCK-NSQIFLWDPATGNQIGRVLTGHSKWITC 217
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+C+ N P+ +L S S D +++W+ RC + GH Q+V + +
Sbjct: 218 LCWEPLHIN--------PECRYLA-SASKDGSIRIWDTLMG-RCDKILTGHTQSVTCVKW 267
Query: 445 NNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPDEDKQ 492
G + S+ DR +K+W ++ G C + + Y ++ F P E
Sbjct: 268 GGDGLLY-SSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATI 326
Query: 493 H-LDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ + + D V + L S D + ++ K + T G
Sbjct: 327 NPQDMSGSLAELKDKAQQRYDKVRGQGPER-LVSGSDDFTLFLWRPAEDKKPLERMT--G 383
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H + FSPD + S D +W+ +T K + H W S
Sbjct: 384 HQAL--INQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSAD--S 439
Query: 612 KVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
+++ +G +T KV DA K+A+++ +++
Sbjct: 440 RLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVF 473
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 81/340 (23%), Positives = 131/340 (38%)
Query: 309 GTNLRSDTPPDRCFL--PKT--QV-HTWEGHTKGISAIRWFP----KSAHLLLSCSMDCR 359
G L S + FL P T Q+ GH+K I+ + W P L S S D
Sbjct: 181 GKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGS 240
Query: 360 VKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKL 419
+++W+ R C + GH Q+V C ++W LL S S D +K+
Sbjct: 241 IRIWDTLMGR-CDKILTGHTQSVT--C-----------VKWGGDG--LLYSSSQDRTIKV 284
Query: 420 WEVYKEHRCVRTYYGHRQAVRDICFNN-----TG--------------TNFISAGYDRYL 460
W C RT GH V + + TG + ++ D+
Sbjct: 285 WRSQDGILC-RTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQ 343
Query: 461 KLWDTESGECISRFTSRKVAYCV-KFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPN 519
+ +D G+ R S + + + P EDK+ L+ + + + + S P+
Sbjct: 344 QRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFS-------PD 396
Query: 520 NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKC 579
+ +A S D I ++ L + GH+ A Y + +S D L+SG +D
Sbjct: 397 TRIIASASFDKSIKLWEGRTGKYLT---SLRGHVSAVY--QIAWSADSRLLVSGSSDSTL 451
Query: 580 YIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
+WD +T KL H +T W P + +V + G D
Sbjct: 452 KVWDAETKKLAIDLPGHADEVFATDWSP-DGQRVASGGKD 490
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 135 (52.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 359 RVKLW-EVYKERRCVRTYYGH-RQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCR 416
R + W EVYK+R V T + + R +++ F TN + +++ ++L + S D
Sbjct: 317 RYRPWKEVYKDRFKVGTNWKYGRCSIKT--FKGH-TNGVMCLQF---EDNILATGSYDTT 370
Query: 417 VKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTS 476
+K+W+ +RT GH +R + F++T IS DR +K+W+ +GECIS +T
Sbjct: 371 IKIWDTETGEE-LRTLRGHESGIRCLQFDDT--KLISGSMDRTIKVWNWRTGECISTYTG 427
Query: 477 RK 478
+
Sbjct: 428 HR 429
Score = 116 (45.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN 450
GT+F + R P +++ ++D ++LWE RC+RT++GH + V + +
Sbjct: 568 GTSFDNG-RAAPP--RYMVTSALDSTIRLWET-TTGRCLRTFFGHLEGVWALGADTL--R 621
Query: 451 FISAGYDRYLKLWDTESGECISRFT 475
+S DR +K+WD +G+C FT
Sbjct: 622 IVSGAEDRMIKIWDPRTGKCERTFT 646
Score = 101 (40.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
GHT ++A+R S+ + S S DC V+LW++ + C+RT++GH V+ +
Sbjct: 466 GHTDWVNAVR-VDTSSRTVFSASDDCTVRLWDL-DTKTCIRTFHGHVGQVQQV 516
Score = 94 (38.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 396 SAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAG 455
S IR L+S SMD +K+W ++ C+ TY GHR V + F+ + S
Sbjct: 390 SGIRCLQFDDTKLISGSMDRTIKVWN-WRTGECISTYTGHRGGVIGLHFD--ASILASGS 446
Query: 456 YDRYLKLWDTESGECIS 472
D+ +K+W+ E S
Sbjct: 447 VDKTVKIWNFEDKSTFS 463
Score = 85 (35.0 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+ + T++GHT G+ +++ ++L + S D +K+W+ +RT GH +R
Sbjct: 339 RCSIKTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWDTETGEE-LRTLRGHESGIRC 394
Query: 385 ICFNNT 390
+ F++T
Sbjct: 395 LQFDDT 400
Score = 83 (34.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 405 AHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
A +L S S+D VK+W E + + GH V + + + SA D ++LWD
Sbjct: 439 ASILASGSVDKTVKIWNF--EDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWD 496
Query: 465 TESGECISRF 474
++ CI F
Sbjct: 497 LDTKTCIRTF 506
Score = 65 (27.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 521 KWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCY 580
+++ ++D+ I ++ L +TF GH+ +A D ++SG D
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCL---RTFFGHLEGVWA----LGADTLRIVSGAEDRMIK 632
Query: 581 IWDWKTTKLFKKWKAHDG--VCI 601
IWD +T K + + H G CI
Sbjct: 633 IWDPRTGKCERTFTGHSGPVTCI 655
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 178 (67.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 57/195 (29%), Positives = 87/195 (44%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + LLS S D ++LW + + C+ Y GH V D F+ G F+S G+DR
Sbjct: 507 FSPDRNYLLSSSEDGTIRLWSL-QTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVA 565
Query: 461 KLWDTESGECISRFTSRKV-AYCVKFHPDED---KQHLDIPVDMKYIADP------TMHS 510
+LW T+ + + F C +FHP+ + D V + + + T H
Sbjct: 566 RLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHK 625
Query: 511 MP--AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
P ++ SPN K+LA S D ++L++ + + K GH YA L FS D
Sbjct: 626 GPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELK---GHTGTIYA--LKFSRDGE 680
Query: 569 YLISGDADGKCYIWD 583
+ SG D +WD
Sbjct: 681 IIASGSIDNTVRLWD 695
Score = 38 (18.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 123 LDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQRRT 182
+D E + +++ T+ T + S PL PED + L + +R+
Sbjct: 24 VDAEKETKPEILSDGTANPSGNTGGGTLSSSPLTAAPAAGAPKPEDQQTLLAVLQFLKRS 83
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 163 (62.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 70/280 (25%), Positives = 118/280 (42%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVY-KERRCVRTYYGHRQA 381
LP ++T++ K +S + F + + D +K+W + +
Sbjct: 454 LPSVCMYTFQNTNKDMSCLD-FSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDK 512
Query: 382 VRD-ICFNNTG-TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAV 439
D C G + + + + P + +LL S S D V+LW + H + +Y GH V
Sbjct: 513 DEDPTCKTLVGHSGTVYSTSFSPDNKYLL-SGSEDKTVRLWSM-DTHTALVSYKGHNHPV 570
Query: 440 RDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSR-KVAYCVKFHPD--------ED 490
D+ F+ G F +A +D+ +LW + + F CV FHP+ D
Sbjct: 571 WDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSD 630
Query: 491 K--QHLDIPVDMKYIADPTMHSMPAVTSS--PNNKWLACQSMDNKILIFSALNRFKLNRK 546
K + D+ + H+ P ++ + P+ +WL+ S D I ++ + K R
Sbjct: 631 KTCRMWDVSTGDS-VRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWD-IGTGK--RL 686
Query: 547 KTFEGH-MVAGYACSLDFSPDMSYLISGDADGKCYIWDWK 585
K GH A Y SL +S + + LISG AD +WD K
Sbjct: 687 KQMRGHGKNAIY--SLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 54 (24.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/117 (25%), Positives = 43/117 (36%)
Query: 123 LDPSSEVESKVIGASTSGDKNKTVFESTSKRPLDKRKRNRNDCPEDIEGFLGPFENQRRT 182
LDP+ VES V D K + S S+ K+ N P LGPF
Sbjct: 277 LDPNI-VES-VTAREKLADGIKVL--SDSENGNGKQNLEMNSVPVK----LGPFPKDEEF 328
Query: 183 FASYGYAL----DPSSEVESKVIGASMSGDKNKTVFESTSKRPLDKRKRNRNDCPED 235
L D ++ + G + SG N+T+ + +K K N D +D
Sbjct: 329 VKEIETELKIKDDQEKQLNQQTAGDNYSGANNRTLLQEYKAMNNEKFKDNTGDDDKD 385
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 134 (52.2 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 37/147 (25%), Positives = 65/147 (44%)
Query: 346 KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSA 405
K LL S D +++W + + + + GHR +V + FN G
Sbjct: 69 KDGALLASGYSDGSIRIWSM-SDYQLQAVFNGHRGSVTTMTFNRLG-------------- 113
Query: 406 HLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDT 465
++L+S S D V +W++ E R GHR + + + I++ D ++K+WDT
Sbjct: 114 NILVSGSKDTEVIVWDIITESGLFRLR-GHRDQITSVKLLERSNHLITSSKDGFIKIWDT 172
Query: 466 ESGECISRFTS-RKVAYCVKFHPDEDK 491
E+ CI R + + +PDE +
Sbjct: 173 ETQHCIQTIVGHRNPIWGIDVNPDETR 199
Score = 122 (48.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + ++L+S S D V +W++ E R GHR I++++ +
Sbjct: 109 FNRLGNILVSGSKDTEVIVWDIITESGLFRLR-GHRDQ-------------ITSVKLLER 154
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S HL+ S S D +K+W+ +H C++T GHR + I N T S D ++ W
Sbjct: 155 SNHLITS-SKDGFIKIWDTETQH-CIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Query: 464 DTESGE 469
S E
Sbjct: 213 RIPSNE 218
Score = 93 (37.8 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGT 392
GH I++++ +S HL+ S S D +K+W+ + + C++T GHR + I N T
Sbjct: 141 GHRDQITSVKLLERSNHLITS-SKDGFIKIWDT-ETQHCIQTIVGHRNPIWGIDVNPDET 198
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR 427
L SC+ D +++ W + R
Sbjct: 199 R--------------LCSCTSDNQIRFWRIPSNER 219
Score = 91 (37.1 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 513 AVTSSPNNKWLACQSMDNKILIF-SALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
A+ S +NK+LA +DN + IF + +F L+ GH + C LD S D + +I
Sbjct: 536 ALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLS----LYGHKLP-VMC-LDISDDSTLII 589
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHD 597
+G AD IW K + AHD
Sbjct: 590 TGSADKNIKIWGLDYGDCHKSFFAHD 615
Score = 58 (25.5 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 38/201 (18%), Positives = 83/201 (41%)
Query: 527 SMDNKILIFSALNRFKLNRKKTFE--GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDW 584
S ++++L+ ++ K+ K+ + Y F+P ++I G G +++
Sbjct: 405 SSNDQMLVSTSSESVKVWNMKSLSCIRSIACDYGLCTVFAPGNLHVIVGTKTGTIEVFEL 464
Query: 585 KTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQL 644
+ KAH+G S + P + VT+G K D ++ + +V L
Sbjct: 465 ASAARVASIKAHEGSVWSLVLTPD--LRGVTSGGADKLVKFWDFELIASQENSKHKVLNL 522
Query: 645 YQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEKNRNEIK-NGSVLR-LA 702
+TL + S + + +S +D++ A+ + K + T+ + + G L +
Sbjct: 523 -SLTKTLKVESDV--LALKYS-ADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMC 578
Query: 703 FSASKTADDILSKLSDKNASL 723
S + I++ +DKN +
Sbjct: 579 LDISDDSTLIITGSADKNIKI 599
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 517 SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDAD 576
+P N + + I +F + ++ K EG + SL +PD+ + SG AD
Sbjct: 444 APGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSV-----WSLVLTPDLRGVTSGGAD 498
Query: 577 GKCYIWDWK 585
WD++
Sbjct: 499 KLVKFWDFE 507
Score = 41 (19.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 16/83 (19%), Positives = 34/83 (40%)
Query: 701 LAFSASKTADDILSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSVV 760
L FS +T + + D++ + EF C L +T + + + +F+ + +
Sbjct: 808 LPFSVMRTLFEYFNLWVDQSGK-----SVEFIFKCSFFLIQTHQNQLSVSTEFIPILQHL 862
Query: 761 REQITRALSSQPASLDKFRANIS 783
I L + +L R+ +S
Sbjct: 863 NTSIKNRLQKERFTLGFNRSALS 885
Score = 41 (19.5 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 501 KYIADPTM--HSMPAVTSSPNNKWLACQSMDNKILIF 535
KY T+ S+ V P NK LA QS + +F
Sbjct: 278 KYYGSITVKAESVSGVRFDPTNKILAVQSTGKFVDLF 314
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 69/282 (24%), Positives = 116/282 (41%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYK-ERRCVRTYYGHRQAVRDICFNNT 390
EGHT+ I ++ W P + L SCS D + +W + C+ T GH V+ C N
Sbjct: 42 EGHTRTIRSVAWSP-CGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVK--CVN-- 96
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE---HRCVRTYYGHRQAVRDICFNNT 447
W +L SCS D +WE +E + C H Q V+ + ++
Sbjct: 97 ---------WSSSGVYLA-SCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPK 146
Query: 448 GTNFISAGYDRYLKLWDT--ESGECISRFTSRK-VAYCVKFHPDE-------DKQHLDI- 496
+SA YD +K++ + EC + + + FH D + L I
Sbjct: 147 ENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDDKVLKIW 206
Query: 497 ------PVDMKYIADPTM---HSMPAVT---SSPNNKWLACQSMDNKILIFSALN-RFKL 543
P D+K+I+ T+ H+ P S NNK +A D+ I IFS + +
Sbjct: 207 KCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNK-IATACGDDAIRIFSIVRITISI 265
Query: 544 NRKKTFEGHMVA-GYACSL-DFSPDMSYLISGDADGKCY-IW 582
+ + F + A + ++ + P + +++ +D C IW
Sbjct: 266 SNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIW 307
Score = 155 (59.6 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERR---CVRTYYGHRQAVRDIC 386
T EGH + + W +L SCS D +WE +E C H Q V+ +
Sbjct: 84 TLEGHENEVKCVNWSSSGVYLA-SCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVV 142
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICFN 445
W PK + L+S S D +K++ EV + C T GH V + F+
Sbjct: 143 -------------WSPKE-NALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFH 188
Query: 446 NTGTNFISAGYDRYLKLW 463
++G F+S G D+ LK+W
Sbjct: 189 SSGELFVSCGDDKVLKIW 206
Score = 46 (21.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 748 ATTEDFVKVFSVVREQITRALSSQPASLDKFRAN 781
A +D +++FS+VR IT ++S+Q + ++A+
Sbjct: 247 ACGDDAIRIFSIVR--ITISISNQLLFIAYYQAH 278
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 73/290 (25%), Positives = 126/290 (43%)
Query: 328 VHTWEGHTKGISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKERRCVRTYY---GHRQAV 382
+ T GHT + + W K + LLL+ SMD + LWE ER V+ + GH +V
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSV 192
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR---------CVRT-- 431
I +++GT F S W K + + D ++ E R RT
Sbjct: 193 DAIAVDSSGTKFCSG-SW-DKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPL 250
Query: 432 --YYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDE 489
GH +A+ + +++ SA +D +++WD ESG S T KV C+ + P
Sbjct: 251 VTLSGHTEAISSVLWSDAD-EVCSASWDHTVRVWDVESGGLKSTLTGNKVFNCISYSP-L 308
Query: 490 DKQHLDIPVDMKY-IADPTMH--SMPAVTSSPNNKWLAC----QSMDNKILIFSALNRFK 542
K+ D + DP S+ +++ + + W+ + D +++ S N K
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVK 368
Query: 543 LNRKKTFEGHM--VAGY---ACSLDFSPDMSYLISGDADGKCYIWDWKTT 587
L ++ + + +A + S+D++ D L+SG AD K Y + + T
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWT-DTGLLLSGGADNKLYSYRYSPT 417
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 392 TNFISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNN 446
T+ + + W K + LLL+ SMD + LWE E V+ + GH +V I ++
Sbjct: 140 TDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDS 199
Query: 447 TGTNFISAGYDRYLKLWDT---ESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYI 503
+GT F S +D+ LK+W T + + I T+R + + L +
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRP-------RKKQKTEQLGLTRTPLVT 252
Query: 504 ADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDF 563
++ +V S ++ + S D+ + ++ + K T G+ V + C + +
Sbjct: 253 LSGHTEAISSVLWSDADE-VCSASWDHTVRVWDVESG---GLKSTLTGNKV--FNC-ISY 305
Query: 564 SPDMSYLISGDADGKCYIWDWKT---TKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
SP L SG D +WD +T + + +H G S W P ++++ D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLD 364
Score = 129 (50.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 41/137 (29%), Positives = 64/137 (46%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H IS+I+ + +LS S D ++W + E + + T GH V+D+
Sbjct: 100 HDDWISSIKG---AEEWILSGSYDKTSRIWSL--EGKSIMTIVGHTDVVKDVA------- 147
Query: 394 FISAIRWFPKSAH--LLLSCSMDCRVKLWEVYKEHRCVRTYY---GHRQAVRDICFNNTG 448
W K + LLL+ SMD + LWE E V+ + GH +V I +++G
Sbjct: 148 ------WVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSG 201
Query: 449 TNFISAGYDRYLKLWDT 465
T F S +D+ LK+W T
Sbjct: 202 TKFCSGSWDKMLKIWST 218
Score = 68 (29.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSY-LIS 572
++ SP K LA S D I ++ + + H G+ S+ +SP LIS
Sbjct: 303 ISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSH--TGWVTSVKWSPTHDQQLIS 360
Query: 573 GDADGKCYIWDWKTTKL-FKKWKAHDGVCISTLW 605
G D +WD ++ K AH+ +S W
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 175 (66.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED------KQHLDIPVDM---KYI 503
D +KLWD C+ R+ A C++F PD H D+ K +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 504 ADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
++ H+ P V PN LA S D I + L +F++ EG G S+
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD-LEKFQV--VSCIEGE--PGPVRSV 237
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLF 590
F+PD L SG D ++ W+ + F
Sbjct: 238 LFNPDGCCLYSGCQDS-LRVYGWEPERCF 265
Score = 160 (61.4 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
SG +D WD + ++ + G S L++P
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 665 SLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLR 700
++ + + + FS++N +Y+ + R + G+V R
Sbjct: 279 AICNDQLIGVAFSQSNVSSYVVDLTR-VTRTGTVAR 313
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 74/334 (22%), Positives = 129/334 (38%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ + RT GH + +
Sbjct: 148 ETPHFTCKGHRHWVLSISWSPDGKKLASGCK-NGQILLWDPSTGTQVGRTLTGHSKWI-- 204
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
TG ++ + P+ ++ S S D V++W+ RC R GH Q+V + +
Sbjct: 205 -----TGLSW-EPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGHTQSVTCLRW 256
Query: 445 NNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPDEDKQ 492
G + SA DR +K+W G C + + Y ++ F P E
Sbjct: 257 GGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATV 315
Query: 493 HL-DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ +K + + V + L S D + ++S K + T G
Sbjct: 316 NAQDLQGSLKELKERASSRYNLVRGQGPER-LVSGSDDFTLFLWSPAEDKKPLARMT--G 372
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H + FSPD + S D +WD +T K + H W S
Sbjct: 373 HQAL--INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD--S 428
Query: 612 KVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
+++ +G +T KV D K+ ++ ++Y
Sbjct: 429 RLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVY 462
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 84/315 (26%), Positives = 124/315 (39%)
Query: 326 TQV-HTWEGHTKGISAIRWFP----KSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
TQV T GH+K I+ + W P + S S D V++W+ RC R GH Q
Sbjct: 191 TQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQ 249
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+V C +RW LL S S D +K+W + C RT GH V
Sbjct: 250 SVT--C-----------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVN 293
Query: 441 DICFNN-----TGTNFISAGYDRYLKLWDTESG--ECISRFTSR------KVAYCVKFHP 487
+ + TG F A + + D + E R +SR + +
Sbjct: 294 TMALSTDYALRTGA-FEPA--EATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGS 350
Query: 488 DEDKQHLDIPV-DMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
D+ L P D K +A T H + V SP+++ +A S D I ++ L
Sbjct: 351 DDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYL- 409
Query: 545 RKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL 604
+ GH+ A Y + +S D L+SG +D +WD K KL H +
Sbjct: 410 --ASLRGHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVD 465
Query: 605 WHPHEPSKVVTAGWD 619
W P + +V + G D
Sbjct: 466 WSP-DGQRVASGGKD 479
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRC--VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHL 407
LL + S D KLW + RC + T+ GHR+ + C +++ P +
Sbjct: 493 LLATGSQDRTAKLWAL---PRCQLLGTFSGHRRGLW--C-----------VQFSPMD-QV 535
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
L + S D +KLW + ++ C++T+ GH +V + F + GT +S+G D LKLW ++
Sbjct: 536 LATASADGTIKLWAL-QDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKN 594
Query: 468 GECI 471
EC+
Sbjct: 595 NECV 598
Score = 122 (48.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 36/139 (25%), Positives = 64/139 (46%)
Query: 331 WEG-HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
W+ HT ++ + + P S LL + D V++W+V RC T++ F
Sbjct: 104 WKAIHTAPVATMAFDPTST-LLATGGCDGAVRVWDVV---RCYGTHH----------FRG 149
Query: 390 TGTNFISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
+ + + + P A LLL S + D +++W + +E C+ H AV + F+ G
Sbjct: 150 S-PGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERSCLAVLTAHYSAVTSLTFSADG 207
Query: 449 TNFISAGYDRYLKLWDTES 467
+S+G D+ +WD S
Sbjct: 208 HTMLSSGRDKICVIWDLRS 226
Score = 111 (44.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 54/203 (26%), Positives = 82/203 (40%)
Query: 305 PHDVGTNLRSDTPPDRCF-LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLW 363
P D + S++P + F L + GHT + A+ F K L SC+ D +++W
Sbjct: 345 PEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKG-RLFASCAKDQSIRVW 403
Query: 364 EVYK--ERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
+ K E CV GH +V IC + F L++ S DC VKLW
Sbjct: 404 RMNKSGEVACVAQGSGHTHSVGTICCSRLKETF-------------LVTGSQDCTVKLWP 450
Query: 422 VYKEHRCVRTYYGHR--------QAVR---DICFNNTGT----NFISAG-YDRYLKLWDT 465
+ + T GH QA + D N+ ++ G DR KLW
Sbjct: 451 LPEALLSKGT--GHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWAL 508
Query: 466 ESGECISRFTS-RKVAYCVKFHP 487
+ + F+ R+ +CV+F P
Sbjct: 509 PRCQLLGTFSGHRRGLWCVQFSP 531
Score = 109 (43.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 40/173 (23%), Positives = 72/173 (41%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
H + G + + + P A LLL S + D +++W + +ER C+ H AV + F
Sbjct: 145 HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERSCLAVLTAHYSAVTSLTF 203
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV--YKEHRCVRTYYGHRQAVR----- 440
+ G H +LS D +W++ + R V + AV
Sbjct: 204 SADG--------------HTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEP 249
Query: 441 --DICFNNTGTNFISAGYDRYLKLWDTESGECIS-----RFTSRKVAYCVKFH 486
++ + G +F++AG L++W+ SG C+ R R++ +C H
Sbjct: 250 APELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAH 302
Score = 96 (38.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 33/103 (32%), Positives = 48/103 (46%)
Query: 497 PVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
PV ++ A H + +V +PN+K LA S D ++ AL R +L TF GH
Sbjct: 466 PVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLW-ALPRCQL--LGTFSGHR- 521
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHD 597
G C + FSP L + ADG +W + K ++ HD
Sbjct: 522 RGLWC-VQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 563
Score = 82 (33.9 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
V SP ++ LA S D I ++ AL F KTFEGH + + F + L+S
Sbjct: 527 VQFSPMDQVLATASADGTIKLW-ALQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLSS 581
Query: 574 DADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH---EPSKVVTAGWDAATAKVQDANI 630
+DG +W K + + AH+ +W H + +T D+ +D
Sbjct: 582 GSDGLLKLWTIKNNECVRTLDAHE----DKVWGLHCSRLDDRALTGASDSRVVLWKDVTE 637
Query: 631 VKIAVEMEKQVPQL 644
+ A E K+ Q+
Sbjct: 638 AEQAEEQAKREEQV 651
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 171 (65.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 78/313 (24%), Positives = 136/313 (43%)
Query: 341 IRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRW 400
I++ P S +LL SMD +++W+ + Y Q+ D ++ I+
Sbjct: 231 IKFSPDSKYLLTG-SMDGFIEVWDYNTGKLSKSLAY---QSNDDFMMHDDAILCIA---- 282
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYY-GHRQAVRDICFNNTGTNFISAGYDRY 459
F K L + S+D ++K+W++ K +C+R + H V + F+ T +S +D
Sbjct: 283 FSKDGEFLATGSLDNKIKVWQI-KSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSS 341
Query: 460 LKLWDTESGECISRFTSRK--VAYCVKFHPDEDK---------------QHLDI-----P 497
LK+ +SG+ + F + V C F+ DED+ + D P
Sbjct: 342 LKIHGLKSGKALKIFRGHQSFVNDCC-FNHDEDRVISCSSDGKIKIWDAKSSDCLQTITP 400
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
+ + D ++ S+ + +P L C S ++I I S ++ KTF +
Sbjct: 401 TSVVTVRDISIRSITILLKNPEFL-LVCNS--SQISIVSMKSQ---TISKTFTSENSKTF 454
Query: 558 -ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
C+L SP +YL + D D Y +D+ + L K+K HD IS HP + + + T
Sbjct: 455 LVCTL--SPLQNYLYAVDEDNILYTFDFNSGSLLNKFKIHDQEVISISHHPTK-NLLATT 511
Query: 617 GWDAATAKVQDAN 629
G D K+ +N
Sbjct: 512 GSDCLL-KIWKSN 523
Score = 157 (60.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H I I F K L + S+D ++K+W++ K +C+R F TN
Sbjct: 274 HDDAILCIA-FSKDGEFLATGSLDNKIKVWQI-KSGKCLRK------------FEPAHTN 319
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
++ ++ F +++ +LS S D +K+ + K + ++ + GH+ V D CFN+ IS
Sbjct: 320 GVTCLQ-FSRNSTQILSGSFDSSLKIHGL-KSGKALKIFRGHQSFVNDCCFNHDEDRVIS 377
Query: 454 AGYDRYLKLWDTESGECISRFTSRKV 479
D +K+WD +S +C+ T V
Sbjct: 378 CSSDGKIKIWDAKSSDCLQTITPTSV 403
Score = 40 (19.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 19 QTLHLKPIESCAFSVAKS 36
+ LHLK E C + + K+
Sbjct: 91 ELLHLKEYELCKYLIRKT 108
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 47/139 (33%), Positives = 63/139 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERR--CVRTYYGHRQAVRDI 385
V T EGH + ++ W P S +LL +CS D V +WEV +E CV H Q V+ +
Sbjct: 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHV 156
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICF 444
W P S LL S S D VKL+ E + C T GH V I F
Sbjct: 157 V-------------WHP-SQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF 202
Query: 445 NNTGTNFISAGYDRYLKLW 463
+ +G S DR +++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 155 (59.6 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 67/298 (22%), Positives = 113/298 (37%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-RCVRTYYGHRQAVRDICFNNT 390
EGH + + + W P + L S S D +W+ ++ CV T GH
Sbjct: 58 EGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHE----------- 105
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE--HRCVRTYYGHRQAVRDICFNNTG 448
N + ++ W P S +LL +CS D V +WEV +E + CV H Q V+ + ++ +
Sbjct: 106 --NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQ 162
Query: 449 TNFISAGYDRYLKLWDTESGE---CISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIAD 505
SA YD +KL+ E + C + + + F P Q L D + +
Sbjct: 163 ELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSG--QRLASCSDDRTVRI 220
Query: 506 PTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSP 565
+ +P N + +AC D L+ F + G A +
Sbjct: 221 WRQY-LPG-----NEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTG-ALATACGD 273
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATA 623
D + D + T ++ + D C++ W+P EP + + D A
Sbjct: 274 DAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVA--WNPKEPGLLASCSDDGEVA 329
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 47/139 (33%), Positives = 63/139 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERR--CVRTYYGHRQAVRDI 385
V T EGH + ++ W P S +LL +CS D V +WEV +E CV H Q V+ +
Sbjct: 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICF 444
W P S LL S S D VKL+ E + C T GH V I F
Sbjct: 157 V-------------WHP-SQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF 202
Query: 445 NNTGTNFISAGYDRYLKLW 463
+ +G S DR +++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-RCVRTYYGHRQAVRDICFNNT 390
EGH + + + W P + L S S D +W+ ++ CV T GH
Sbjct: 58 EGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHE----------- 105
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE--HRCVRTYYGHRQAVRDICFNNTG 448
N + ++ W P S +LL +CS D V +WEV +E + CV H Q V+ + ++ +
Sbjct: 106 --NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162
Query: 449 TNFISAGYDRYLKLWDTESGE---CISRFTSRKVAYCVKFHP 487
SA YD +KL+ E + C + + + F P
Sbjct: 163 ELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDP 204
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 175 (66.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 334 HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTN 393
H +S++ S LL + DCRV LW + K C+ + GH V + N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNT---- 73
Query: 394 FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFIS 453
P+ L+++ S +++W++ + + +RT GH+ + + F+ G S
Sbjct: 74 --------PEE--LIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 454 AGYDRYLKLWDTESGECISRFTSRKVAY-CVKFHPDED------KQHLDIPVDM---KYI 503
D +KLWD C+ R+ A C++F PD H D+ K +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 504 ADPTMHSMPA--VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSL 561
++ H+ P V PN LA S D I + L +F++ EG G S+
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD-LEKFQV--VSCIEGE--PGPVRSV 237
Query: 562 DFSPDMSYLISGDADGKCYIWDWKTTKLF 590
F+PD L SG D ++ W+ + F
Sbjct: 238 LFNPDGCCLYSGCQDS-LRVYGWEPERCF 265
Score = 160 (61.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
S LL + DCRV LW + K + C+ + GH V + N ++ +++W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 464 DTESGECISRFTSRKVAYC-VKFHPDED-----KQHLDIPV-DMKY---IADPTMHSMPA 513
D E+ + + K C + FHP + Q +I + D++ + HS
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 514 --VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLI 571
+ SP+ KWLA + D+ + ++ L K+ + F GH G ++F P+ L
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWD-LTAGKMMSE--FPGH--TGPVNVVEFHPNEYLLA 205
Query: 572 SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
SG +D WD + ++ + G S L++P
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/43 (20%), Positives = 23/43 (53%)
Query: 665 SLSDSEQYALQFSETNNKNYITEKNRNEIKNGSVLRLAFSASK 707
++ + + + FS++N +Y+ + R + G+V + AS+
Sbjct: 279 AICNDQLIGVAFSQSNVSSYVVDLTR-VTRTGTVTQDPVQASQ 320
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 79/304 (25%), Positives = 118/304 (38%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
LP+ ++ T + + A+R F + L+C D +KLW + +RTY GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVR-FNVDGNYCLTCGSDKTLKLWNPLRGT-LLRTYSGHGYEV 70
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
D G+ F S+ L S D V LW+V + VR + GH V +
Sbjct: 71 LDAA----GS--------FDNSS--LCSGGGDKAVVLWDV-ASGQVVRKFRGHAGKVNTV 115
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
FN T +S D ++ WD S + T + + D + L VD +
Sbjct: 116 QFNEEATVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRV 175
Query: 503 IA-DPTMHSMPA-VTSSPNNKWLACQSMDNKILIFSALNR-FKLNRKKTFE------GHM 553
D M + + SP C S D + + S+L+ +L K T E GH
Sbjct: 176 RRYDLRMGQLFSDYVGSPIT--CICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHK 233
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
Y S ++++S DGK + WD L GV S +HP EP +
Sbjct: 234 NKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLL 293
Query: 614 VTAG 617
G
Sbjct: 294 TAMG 297
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 79/304 (25%), Positives = 117/304 (38%)
Query: 323 LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAV 382
LP+ Q+ T + + A+R F + L+C D +KLW + +RTY GH V
Sbjct: 13 LPRKQLKTLDCGQGAVRAVR-FNVDGNYCLTCGSDKTLKLWNPLRGT-LLRTYSGHGYEV 70
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
D G+ F S HL S D V LW+V + VR + GH V +
Sbjct: 71 LDAA----GS--------FDNS-HLC-SGGGDKTVVLWDV-ATGQVVRKFRGHAGKVNTV 115
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
FN T +S D ++ WD S + T + + D + L VD +
Sbjct: 116 QFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRV 175
Query: 503 IA-DPTMHSMPA-VTSSPNNKWLACQSMDNKILIFSALNR-FKLNRKKTFE------GHM 553
D M + + SP C S D + + S+L+ +L K T E GH
Sbjct: 176 RRYDLRMGQVTSDYVGSPIT--CTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHK 233
Query: 554 VAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKV 613
Y S ++++S DGK + WD L V S +HP +P +
Sbjct: 234 NQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLL 293
Query: 614 VTAG 617
G
Sbjct: 294 TAMG 297
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 350 LLLSCSMDCRVKLWEVYKERRC--VRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHL 407
LL + S D KLW + RC + T+ GHR+ + C +++ P +
Sbjct: 493 LLATGSQDRTAKLWAL---PRCQLLGTFSGHRRGLW--C-----------VQFSPMD-QV 535
Query: 408 LLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
L + S D +KLW + ++ C++T+ GH +V + F + GT +S+G D LKLW ++
Sbjct: 536 LATASADGTIKLWAL-QDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKN 594
Query: 468 GECI 471
EC+
Sbjct: 595 NECV 598
Score = 122 (48.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 36/139 (25%), Positives = 64/139 (46%)
Query: 331 WEG-HTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
W+ HT ++ + + P S LL + D V++W+V RC T++ F
Sbjct: 104 WKAIHTAPVATMAFDPTST-LLATGGCDGAVRVWDVV---RCYGTHH----------FRG 149
Query: 390 TGTNFISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTG 448
+ + + + P A LLL S + D +++W + +E C+ H AV + F+ G
Sbjct: 150 S-PGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERSCLAVLTAHYSAVTSLTFSADG 207
Query: 449 TNFISAGYDRYLKLWDTES 467
+S+G D+ +WD S
Sbjct: 208 HTMLSSGRDKICVIWDLRS 226
Score = 115 (45.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 49/201 (24%), Positives = 79/201 (39%)
Query: 305 PHDVGTNLRSDTPPDRCF-LPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLW 363
P D + S++P + F L + GHT + A+ F K L SC+ D +++W
Sbjct: 345 PEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKG-RLFASCAKDQSIRVW 403
Query: 364 EVYK--ERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
+ K E CV GH +V IC + F L++ S DC VKLW
Sbjct: 404 RMNKSGEVACVAQGSGHTHSVGTICCSRLKETF-------------LVTGSQDCTVKLWP 450
Query: 422 VYKE-------H-------RCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES 467
+ + H + T + H + + + + DR KLW
Sbjct: 451 LPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPR 510
Query: 468 GECISRFTS-RKVAYCVKFHP 487
+ + F+ R+ +CV+F P
Sbjct: 511 CQLLGTFSGHRRGLWCVQFSP 531
Score = 109 (43.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 40/173 (23%), Positives = 72/173 (41%)
Query: 329 HTWEGHTKGISAIRWFPKSAHLLL-SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
H + G + + + P A LLL S + D +++W + +ER C+ H AV + F
Sbjct: 145 HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERSCLAVLTAHYSAVTSLTF 203
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV--YKEHRCVRTYYGHRQAVR----- 440
+ G H +LS D +W++ + R V + AV
Sbjct: 204 SADG--------------HTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEP 249
Query: 441 --DICFNNTGTNFISAGYDRYLKLWDTESGECIS-----RFTSRKVAYCVKFH 486
++ + G +F++AG L++W+ SG C+ R R++ +C H
Sbjct: 250 APELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAH 302
Score = 95 (38.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 33/103 (32%), Positives = 48/103 (46%)
Query: 497 PVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMV 554
PV ++ A H + +V +PN+K LA S D ++ AL R +L TF GH
Sbjct: 466 PVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLW-ALPRCQL--LGTFSGHR- 521
Query: 555 AGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHD 597
G C + FSP L + ADG +W + K ++ HD
Sbjct: 522 RGLWC-VQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD 563
Score = 82 (33.9 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 514 VTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISG 573
V SP ++ LA S D I ++ AL F KTFEGH + + F + L+S
Sbjct: 527 VQFSPMDQVLATASADGTIKLW-ALQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLSS 581
Query: 574 DADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH---EPSKVVTAGWDAATAKVQDANI 630
+DG +W K + + AH+ +W H + +T D+ +D
Sbjct: 582 GSDGLLKLWTIKNNECVRTLDAHE----DKVWGLHCSRLDDRALTGASDSRVVLWKDVTE 637
Query: 631 VKIAVEMEKQVPQL 644
+ A E K+ Q+
Sbjct: 638 AEQAEEQAKREEQV 651
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 60/238 (25%), Positives = 101/238 (42%)
Query: 392 TNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNF 451
+++I + + P LL S S D +KLW+ +T GH +V+ + F+ G
Sbjct: 41 SDWIETVTFSP-DGRLLASGSNDTTIKLWDP-ASGGLKQTLEGHSSSVQSVAFSPNGQLL 98
Query: 452 ISAGYDRYLKLWDTESGECISRFT--SRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMH 509
S D +KLW++ S S +V V F P+ + I +K+ +
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSDRVE-SVAFSPNGQLWNPAIG-SLKHTIEGHSD 156
Query: 510 SMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSY 569
+ +V SP+ + LA S + I ++ + K T GH + + L FSPD
Sbjct: 157 WVLSVAFSPDGQLLASGSAEKTIKLWDSAT---CGLKHTLGGH--SNWVLPLVFSPDGRL 211
Query: 570 LISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
L SG D +WD + L + H S + P+ +++ +G AT K+ D
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPN--GQLLASGSSDATIKLWD 267
Score = 123 (48.4 bits), Expect = 0.00045, P = 0.00045
Identities = 45/157 (28%), Positives = 62/157 (39%)
Query: 330 TWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNN 389
T EGH+ + ++ + P + LL S S D +KLW + T GH V + F+
Sbjct: 78 TLEGHSSSVQSVAFSP-NGQLLASGSSDTTIKLWNSASDS-LKHTMEGHSDRVESVAFSP 135
Query: 390 TGTNFISAIR-----------W-----FPKSAHLLLSCSMDCRVKLWEVYKEHRC--VRT 431
G + AI W F LL S S + +KLW+ C T
Sbjct: 136 NGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD---SATCGLKHT 192
Query: 432 YYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESG 468
GH V + F+ G S D +KLWD SG
Sbjct: 193 LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSG 229
Score = 108 (43.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 511 MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYL 570
+P V S P+ + LA S D I ++ + + K T EGH + SL FSP+ L
Sbjct: 201 LPLVFS-PDGRLLASGSNDATIKLWDPPSG---SLKHTLEGH--SNKIESLAFSPNGQLL 254
Query: 571 ISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAG--------WDAAT 622
SG +D +WD T K H + +S ++ P S+++ +G WD AT
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPD--SQLLESGSGDNTIKLWDPAT 312
Query: 623 A----KVQDANIVKIAVEMEKQVPQL 644
++ IV+ ++E ++PQL
Sbjct: 313 GILKHSMRTPGIVR-SIEFSIELPQL 337
Score = 102 (41.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 34/122 (27%), Positives = 50/122 (40%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
++ T EGH+ I + + P LL S S D +KLW+ +T GH +V+ +
Sbjct: 33 ELQTLEGHSDWIETVTFSP-DGRLLASGSNDTTIKLWDP-ASGGLKQTLEGHSSSVQSVA 90
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
F+ G LL S S D +KLW + T GH V + F+
Sbjct: 91 FSPNG--------------QLLASGSSDTTIKLWNSASDS-LKHTMEGHSDRVESVAFSP 135
Query: 447 TG 448
G
Sbjct: 136 NG 137
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/139 (33%), Positives = 63/139 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERR--CVRTYYGHRQAVRDI 385
V T EGH + ++ W P S +LL +CS D V +WEV +E CV H Q V+ +
Sbjct: 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICF 444
W P S LL S S D VKL+ E + C T GH V + F
Sbjct: 157 V-------------WHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Query: 445 NNTGTNFISAGYDRYLKLW 463
+ +G S DR +++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 67/298 (22%), Positives = 113/298 (37%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-RCVRTYYGHRQAVRDICFNNT 390
EGH + + + W P + L S S D +W+ ++ CV T GH
Sbjct: 58 EGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHE----------- 105
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE--HRCVRTYYGHRQAVRDICFNNTG 448
N + ++ W P S +LL +CS D V +WEV +E + CV H Q V+ + ++ +
Sbjct: 106 --NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162
Query: 449 TNFISAGYDRYLKLWDTESGE---CISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIAD 505
SA YD +KL+ E + C + + + F P Q L D + +
Sbjct: 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG--QRLASCSDDRTVRI 220
Query: 506 PTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSP 565
+ +P N + +AC D L+ F + G A +
Sbjct: 221 WRQY-LPG-----NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGD 273
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATA 623
D + D + + T + + D C++ W+P EP + + D A
Sbjct: 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA--WNPKEPGLLASCSDDGEVA 329
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/139 (33%), Positives = 63/139 (45%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERR--CVRTYYGHRQAVRDI 385
V T EGH + ++ W P S +LL +CS D V +WEV +E CV H Q V+ +
Sbjct: 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICF 444
W P S LL S S D VKL+ E + C T GH V + F
Sbjct: 157 V-------------WHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Query: 445 NNTGTNFISAGYDRYLKLW 463
+ +G S DR +++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 332 EGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKER-RCVRTYYGHRQAVRDICFNNT 390
EGH + + + W P + L S S D +W+ ++ CV T GH
Sbjct: 58 EGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNEDDFECVTTLEGHE----------- 105
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE--HRCVRTYYGHRQAVRDICFNNTG 448
N + ++ W P S +LL +CS D V +WEV +E + CV H Q V+ + ++ +
Sbjct: 106 --NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162
Query: 449 TNFISAGYDRYLKLWDTESGECI 471
SA YD +KL+ E + +
Sbjct: 163 ELLASASYDDTVKLYREEEDDWV 185
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 112 (44.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 33/135 (24%), Positives = 59/135 (43%)
Query: 344 FPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPK 403
F + SCS D V +W ++R + + GH+ AV C +++ P
Sbjct: 55 FDPKMRQVASCSKDSIVYVWNFKPQQRPFK-FVGHKGAV--YC-----------VKYSP- 99
Query: 404 SAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLW 463
+ SC D +++LW+ + +C H A+R + F+ G +S+ D+ LKLW
Sbjct: 100 DGETIASCGQDRQIRLWQNTVQSKC-SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLW 158
Query: 464 DTESGECISRFTSRK 478
+ + + F K
Sbjct: 159 RLQDKKFMCSFAGHK 173
Score = 102 (41.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 511 MPAVTSSPNNKWLACQSMD-NKILI-FSALN-RFKLNRKKTFEGHMVAGYACSLDFSPDM 567
M V S ++K + ++ KI+ +S L+ K+++ ++ HM + F PD
Sbjct: 185 MRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDT--VSQVLFHPDG 242
Query: 568 SYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
+ LIS D K I D ++ KL + + AHD S HP + +AG D+ K+ D
Sbjct: 243 TCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHP-TGYFLASAGSDSKI-KIWD 300
Query: 628 ---ANIVKIAVEMEKQVPQLYQFNQT--LTLSSIIQEICSGWSLSDSEQYALQFSETNNK 682
+ +K + + QFNQ+ + Q +C W + + +Q E +
Sbjct: 301 LRQGRQIYTLYSNDKDITTV-QFNQSGDYFATGGSQNLCMVWKTNFDQN--IQNIEQVQR 357
Query: 683 NYITEKNRNEIKNGSVLRLAFSASKTA 709
+ + + + G + F +KTA
Sbjct: 358 STVRQNDVEYSSGGLYAQTLFKTNKTA 384
Score = 93 (37.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 393 NFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFI 452
+ I+ + PK + SCS D V +W + R + + GH+ AV + ++ G
Sbjct: 48 DIITCADFDPKMRQVA-SCSKDSIVYVWNFKPQQRPFK-FVGHKGAVYCVKYSPDGETIA 105
Query: 453 SAGYDRYLKLW-DTESGEC 470
S G DR ++LW +T +C
Sbjct: 106 SCGQDRQIRLWQNTVQSKC 124
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 167 (63.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 69/278 (24%), Positives = 117/278 (42%)
Query: 359 RVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVK 418
R++LW+ Y+ + + GH VR I F+ T F+S D +V
Sbjct: 34 RIQLWD-YRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSG--------------GDDYKVN 78
Query: 419 LWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK 478
+W YK + + + GH VR F++ +S D+ +++W+ +S CI+ T
Sbjct: 79 VWN-YKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHS 137
Query: 479 -VAYCVKFHPDED---KQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWL-ACQSMDNKIL 533
C FHP ED LD V + I+ M + V+ S ++ A S+ N +
Sbjct: 138 HYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDL- 196
Query: 534 IFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFK-- 591
F + + K EGH C+ F P + ++S D +W +K ++
Sbjct: 197 -FGSTDAIV---KFVLEGHDRGVNWCA--FHPTLPLILSAGDDRLVKLWRMTASKAWEVD 250
Query: 592 KWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDAN 629
+ H L+HPH+ +++A D T +V D N
Sbjct: 251 TCRGHFNNVSCCLFHPHQ-ELILSASEDK-TIRVWDLN 286
Score = 52 (23.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 29/127 (22%), Positives = 60/127 (47%)
Query: 713 LSKLSDKNASLEEKTAAEFYCICIVLLNKTWKEMRATTEDFVKVFSV-VREQITRALSSQ 771
++ L+ K+ LEEK A + C NKT +E++ + V V E T
Sbjct: 764 IAYLTAKSNGLEEK-AQQILSHC----NKTEEEIKLPSLGSAFTTPVPVNETYTHNWPLL 818
Query: 772 PASLDKFRANIS-RLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQR 830
S F ++ R+ I Q+E+ S EE+E + ++++ + ++ ++ + + ++
Sbjct: 819 DTSHSTFEKSLQERMEQLAIER--QEEQESEEEYEEVEQSLMDVVDEMS-DLAESVPEEE 875
Query: 831 L-GYLVE 836
+ G+ VE
Sbjct: 876 VDGWEVE 882
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 169 (64.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 73/334 (21%), Positives = 129/334 (38%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
+T T +GH + +I W P L C + ++ LW+ ++ R GH + +
Sbjct: 97 ETPHFTCQGHRHWVLSISWSPDGKTLASGCK-NGQILLWDPSTGKQVGRVLAGHSKWITG 155
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ + N P+ ++ S S D V++W+ RC R GH Q+V + +
Sbjct: 156 LSWEPLHAN--------PECRYMA-SSSKDGSVRVWDT-TAGRCERILTGHTQSVTCLRW 205
Query: 445 NNTGTNFISAGYDRYLKLWDTESGE-CIS--------RFTSRKVAYCVK---FHPDEDKQ 492
G + SA DR +K+W G C + + Y ++ F P E
Sbjct: 206 GGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASI 264
Query: 493 HL-DIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ D+ ++ + D + V + L S D + ++S K + T G
Sbjct: 265 NAQDLQGSLQELKDRALRRYNLVRGQGPER-LVSGSDDFTLFMWSPAEDKKPLARMT--G 321
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPS 611
H + FSPD + S D +WD +T K + H W S
Sbjct: 322 HQAL--INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD--S 377
Query: 612 KVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLY 645
+++ +G +T KV D K+A ++ ++Y
Sbjct: 378 RLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVY 411
Score = 157 (60.3 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 83/313 (26%), Positives = 125/313 (39%)
Query: 333 GHTKGISAIRWFPKSAH----LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFN 388
GH+K I+ + W P A+ + S S D V++W+ RC R GH Q+V C
Sbjct: 148 GHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDT-TAGRCERILTGHTQSVT--C-- 202
Query: 389 NTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN-- 446
+RW LL S S D +K+W + C RT GH V + +
Sbjct: 203 ---------LRWGGDG--LLYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDY 250
Query: 447 ---TGT-----NFISA----GY-----DRYLKLWDTESGECISRFTSRKVAYCV-KFHPD 488
TG I+A G DR L+ ++ G+ R S + + + P
Sbjct: 251 ALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPA 310
Query: 489 EDKQHLDIPVDMKYIADPTMHS--MPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRK 546
EDK K +A T H + V SP+++ +A S D I ++ L
Sbjct: 311 EDK---------KPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYL--- 358
Query: 547 KTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWH 606
+ GH+ A Y + +S D L+SG +D +WD K KL H + W
Sbjct: 359 ASLRGHVAAVY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWS 416
Query: 607 PHEPSKVVTAGWD 619
P + +V + G D
Sbjct: 417 P-DGQRVASGGKD 428
Score = 37 (18.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 15 DAESQTLHLKPIESCAFSVAKSLSVCATPAVIPKVMESSNLT 56
DAE + K +ES A K L + P I +V + T
Sbjct: 17 DAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCT 58
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 71/285 (24%), Positives = 112/285 (39%)
Query: 316 TPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTY 375
T P RC + + GH + ++ P + L S D + LW VY + T
Sbjct: 48 TGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGS-TLASAGFDRLILLWSVYGDCDNYATL 106
Query: 376 YGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGH 435
GH AV ++ +N G+ +L S S D V +W+ R V+ GH
Sbjct: 107 KGHSGAVMELHYNTDGS--------------MLFSASTDKTVAVWDSETGER-VKRLKGH 151
Query: 436 RQAVRDICFN-NTGTNFISAGYDR-YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQ- 492
V C+ G + G D +KLWD I F + V F+ D+
Sbjct: 152 TSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 210
Query: 493 ----HLDIPV-DMK-----YIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFK 542
DI V D++ Y S+ ++ S +L +MDN + ++ + F
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD-VRPFA 269
Query: 543 LNRK--KTFEGHMVAGYACSL---DFSPDMSYLISGDADGKCYIW 582
+ K F+G+ V + +L +SPD S + +G AD Y W
Sbjct: 270 PKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/195 (26%), Positives = 81/195 (41%)
Query: 401 FPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYL 460
F + L S D + LW VY + T GH AV ++ +N G+ SA D+ +
Sbjct: 75 FHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 461 KLWDTESGECISR-----------FTSRKVAYCVKFHPDEDKQHL-DIPVDMKYIADPTM 508
+WD+E+GE + R + +R+ V D+ L DI
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 194
Query: 509 HSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS 568
+ + AVT + + + +DN I ++ L + KL T GH A L S + S
Sbjct: 195 YQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTY--TMRGH--ADSVTGLSLSSEGS 249
Query: 569 YLISGDADGKCYIWD 583
YL+S D +WD
Sbjct: 250 YLLSNAMDNTVRVWD 264
WARNING: HSPs involving 434 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1019 995 0.00099 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 684
No. of states in DFA: 630 (67 KB)
Total size of DFA: 551 KB (2246 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 92.48u 0.14s 92.62t Elapsed: 00:00:07
Total cpu time: 92.56u 0.14s 92.70t Elapsed: 00:00:07
Start: Thu Aug 15 15:05:31 2013 End: Thu Aug 15 15:05:38 2013
WARNINGS ISSUED: 2