RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy307
(1019 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 133 bits (334), Expect = 8e-35
Identities = 69/325 (21%), Positives = 122/325 (37%), Gaps = 49/325 (15%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
+ + GH ++ + + P +++S S D +K+W+ + RT GH +V+
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDY-ETGDFERTLKGHTDSVQ 63
Query: 384 DICFNNT----------------------------GTNFISAIRWFPKSAHLLLSCSMDC 415
DI F+++ G + + + ++S S D
Sbjct: 64 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 416 RVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFT 475
+K+WEV + CV+T+ GHR+ VR + N GT S D+ +++W + EC +
Sbjct: 124 TIKMWEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182
Query: 476 S-RKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILI 534
R V C+ + P+ + S +L S D I +
Sbjct: 183 EHRHVVECISWAPESSYSSIS-----------EATGSETKKSGKPGPFLLSGSRDKTIKM 231
Query: 535 FSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWK 594
+ L T GH + + F +++S D +WD+K + K
Sbjct: 232 WDVSTGMCL---MTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286
Query: 595 AHDGVCISTLWHPHEPSKVVTAGWD 619
AH+ S +H P VVT D
Sbjct: 287 AHEHFVTSLDFHKTAP-YVVTGSVD 310
Score = 86.7 bits (213), Expect = 7e-19
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 16/170 (9%)
Query: 295 DYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSC 354
D R ++ + LR C + S + K LLS
Sbjct: 164 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 223
Query: 355 SMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMD 414
S D +K+W+ C+ T GH VR + F++ G +LSC+ D
Sbjct: 224 SRDKTIKMWD-VSTGMCLMTLVGHDNWVRGVLFHSGG--------------KFILSCADD 268
Query: 415 CRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
+++W+ YK RC++T H V + F+ T ++ D+ +K+W+
Sbjct: 269 KTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 85.6 bits (210), Expect = 1e-18
Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 25/297 (8%)
Query: 429 VRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRK---------- 478
GHR V + F+ + +SA D +K+WD E+G+
Sbjct: 10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69
Query: 479 --VAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFS 536
K + H++ +V+ PN + S D I ++
Sbjct: 70 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 537 ALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAH 596
+ + TF GH + + + D + + S D +W T + + + H
Sbjct: 130 VQTGYCVK---TFTGHR--EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 184
Query: 597 DGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSI 656
V W P ++ + T K ++ +K + +++ + + L ++
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI-KMWDVSTGMCLMTL 243
Query: 657 IQEICSGWSLSDSEQYALQFSETNNK-----NYITEKNRNEIK--NGSVLRLAFSAS 706
+ + S ++K +Y ++ + V L F +
Sbjct: 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 300
Score = 84.4 bits (207), Expect = 3e-18
Identities = 48/304 (15%), Positives = 94/304 (30%), Gaps = 41/304 (13%)
Query: 285 KTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWF 344
+K TD + + +D + +
Sbjct: 50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 109
Query: 345 PKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISA-----IR 399
+ ++S S D +K+WEV + CV+T+ GHR+ VR + N GT S +R
Sbjct: 110 MPNGDHIVSASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 400 WFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRY 459
+ + + + R + + + G +S D+
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 460 LKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPN 519
+K+WD +G C+ + + V
Sbjct: 229 IKMWDVSTGMCLMTLVGHD------------------------------NWVRGVLFHSG 258
Query: 520 NKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKC 579
K++ + D + ++ N+ + KT H + SLDF Y+++G D
Sbjct: 259 GKFILSCADDKTLRVWDYKNKRCM---KTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 580 YIWD 583
+W+
Sbjct: 314 KVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 110 bits (276), Expect = 6e-27
Identities = 69/391 (17%), Positives = 106/391 (27%), Gaps = 91/391 (23%)
Query: 261 AELEEYL--AKKQKKGKQSEEKPLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPP 318
+EL++ A++ K + K + T+ I + D GR +
Sbjct: 2 SELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRR------------ 49
Query: 319 DRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGH 378
T GH I A+ W S LL+S S D ++ +W+ Y V
Sbjct: 50 -----------TLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYT-TNKVHAIPLR 96
Query: 379 RQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRV--------------------- 417
V + +G S + L + + RV
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ 156
Query: 418 ---------KLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESG 468
+ + T+ GH V + F+S D KLWD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 469 ECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSM 528
C FT + + A+ PN A S
Sbjct: 217 MCRQTFTGHE------------------------------SDINAICFFPNGNAFATGSD 246
Query: 529 DNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTK 588
D +F + T+ + S+ FS L++G D C +WD
Sbjct: 247 DATCRLF---DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 589 LFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
HD V T WD
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDG-MAVATGSWD 333
Score = 85.2 bits (209), Expect = 3e-18
Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ-AVRD 384
T+ GH I+AI +FP + + S D +L+++ ++ + + + +
Sbjct: 217 MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ F+ +G LLL+ D +W+ + GH V +
Sbjct: 276 VSFSKSG--------------RLLLAGYDDFNCNVWDA-LKADRAGVLAGHDNRVSCLGV 320
Query: 445 NNTGTNFISAGYDRYLKLWD 464
+ G + +D +LK+W+
Sbjct: 321 TDDGMAVATGSWDSFLKIWN 340
Score = 71.7 bits (174), Expect = 7e-14
Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 35/274 (12%)
Query: 370 RCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCV 429
R RT GH + + + LL+S S D ++ +W+ Y V
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDS--------------RLLVSASQDGKLIIWDSYT-TNKV 90
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTES------------GECISRFTSR 477
V + +G G D +++ ++ G R
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150
Query: 478 KVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPN---NKWLACQSMDNKILI 534
+ D ++ V S + + D +
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 535 FSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWK 594
+ ++TF GH ++ F P+ + +G D C ++D + + +
Sbjct: 211 WDVREG---MCRQTFTGHE--SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 595 AHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDA 628
+ +C T + +++ AG+D V DA
Sbjct: 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 91.8 bits (226), Expect = 2e-20
Identities = 45/302 (14%), Positives = 92/302 (30%), Gaps = 37/302 (12%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
+GH + F + ++S S D +K+W +C+RT GH V
Sbjct: 7 KSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSA-VTGKCLRTLVGHTGGVWSS 63
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN 445
+ + +V+ + + C +
Sbjct: 64 QMRDNI-------------------IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 104
Query: 446 NTGTNFISAGYDRYLKLWDTESGECISRFTSRKVA--------YCVKFHPDEDKQHLDIP 497
+S D L++WD E+G+C+ A V + + P
Sbjct: 105 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 164
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
+ H+ + + + S+D I ++ + T +
Sbjct: 165 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWD-VETGNCIHTLTGHQSLT--- 220
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAG 617
++ + L+SG+AD IWD KT + + + + + + V+T+
Sbjct: 221 -SGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 277
Query: 618 WD 619
D
Sbjct: 278 DD 279
Score = 88.7 bits (218), Expect = 2e-19
Identities = 49/354 (13%), Positives = 98/354 (27%), Gaps = 44/354 (12%)
Query: 363 WEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
W E + + GH V C G ++S S D +K+W
Sbjct: 1 WRR-GELKSPKVLKGHDDHVIT-CLQFCGN--------------RIVSGSDDNTLKVWSA 44
Query: 423 YKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYC 482
+C+RT GH V + S + +T + V
Sbjct: 45 -VTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 103
Query: 483 VKFHPDEDKQHLDIPVDMKYIADPTMH------SMPAVTSSPNNKWLACQSMDNKILIFS 536
D + + I + + + + D + ++
Sbjct: 104 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 163
Query: 537 ALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAH 596
L T +GH Y+ D +++SG D +WD +T H
Sbjct: 164 PETETCL---HTLQGHTNRVYSLQ----FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 216
Query: 597 DGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQLYQFNQTLTLSSI 656
+ + ++ +G +T K+ D + ++
Sbjct: 217 QSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC------- 265
Query: 657 IQEICSGWSLSDSEQYALQFSETNNKNYITEKNRNEIK--NGSVLRLAFSASKT 708
+ + ++ S+ ++ + +I E G V R+ S +K
Sbjct: 266 -LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 318
Score = 80.2 bits (196), Expect = 1e-16
Identities = 44/294 (14%), Positives = 87/294 (29%), Gaps = 38/294 (12%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
+ T GHT G+ + + + R
Sbjct: 48 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 107
Query: 386 CFNNTGTN--------------------FISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE 425
+G+ ++A+R ++S + D VK+W+ +
Sbjct: 108 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP-ET 166
Query: 426 HRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVA-YCVK 484
C+ T GH V + F+ G + +S D +++WD E+G CI T + ++
Sbjct: 167 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224
Query: 485 FHPD------EDKQ----HLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILI 534
+ D + ++ + P H N ++ S D + +
Sbjct: 225 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 535 FSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADG----KCYIWDW 584
+ + T E G + S G +G K + D+
Sbjct: 285 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 91.1 bits (224), Expect = 3e-20
Identities = 34/314 (10%), Positives = 79/314 (25%), Gaps = 26/314 (8%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV--YKERRCVRTYYGHRQAVRDI 385
V + IS I+ P LLL S D + +++ + + ++ +
Sbjct: 4 VQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN 445
F + I + + L R + ++
Sbjct: 63 NFIDNTDLQI-YVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 446 NTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYC-----VKFHPDEDKQHLDI---- 496
Y + + + + Q +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 497 -PVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKL----------NR 545
+ + AC S+D ++ + ++
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 546 KKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLW 605
+ + +A S++FSP +L + +DG W+ +T K K + + +
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK-I 300
Query: 606 HPHEPSKVVTAGWD 619
+ + A D
Sbjct: 301 ACS-DNILCLATSD 313
Score = 61.0 bits (146), Expect = 2e-10
Identities = 28/297 (9%), Positives = 72/297 (24%), Gaps = 56/297 (18%)
Query: 370 RCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV--YKEHR 427
+ V+ + + DI + + LLL S D + +++ ++
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKS--------------LLLITSWDGSLTVYKFDIQAKNV 47
Query: 428 CVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHP 487
+ ++ + F + I G + L G + + A
Sbjct: 48 DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRI 107
Query: 488 DEDKQHLDIPVDMKYIADP-----------TMHSMPAVTSSPNNKWLACQSMDNKILIFS 536
+ I + + + ++ + + NK + +++++
Sbjct: 108 CKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM 167
Query: 537 A--------LNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTT- 587
L + + E + + DG+ + +
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227
Query: 588 --------------KLFKKWKAHDGVCISTLWHPHEPSKVVTAG------WDAATAK 624
+L K S + P W+ T K
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284
Score = 53.7 bits (127), Expect = 5e-08
Identities = 16/141 (11%), Positives = 34/141 (24%), Gaps = 2/141 (1%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
G I + PK S+D RV + + +
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDIC 443
+ +T + F L + D + W + + + ++ + +
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL-QTRKKIKNFAKF-NEDSVVK 299
Query: 444 FNNTGTNFISAGYDRYLKLWD 464
+ A D K
Sbjct: 300 IACSDNILCLATSDDTFKTNA 320
Score = 49.5 bits (116), Expect = 1e-06
Identities = 19/303 (6%), Positives = 63/303 (20%), Gaps = 58/303 (19%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVR 383
+ + + + + + ++ + ++
Sbjct: 45 KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGI 104
Query: 384 DICFNNTGTNFISAIRWFPKSAHLLLSCSM------------------------------ 413
I+A +
Sbjct: 105 CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164
Query: 414 ----DCRVKLWEVY---KEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTE 466
+ +V+ + + ++ + Q + + D + + +
Sbjct: 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224
Query: 467 SGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQ 526
+ R C + + + + + ++ SP +K+L
Sbjct: 225 DQGDDYNSSKRFAFRCHRLNLKDTNL---------------AYPVNSIEFSPRHKFLYTA 269
Query: 527 SMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKT 586
D I ++ R K+ K F + + + L +D
Sbjct: 270 GSDGIISCWNLQTRKKI---KNFAKF---NEDSVVKIACSDNILCLATSDDTFKTNAAID 323
Query: 587 TKL 589
+
Sbjct: 324 QTI 326
Score = 40.2 bits (92), Expect = 0.001
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 17/107 (15%)
Query: 319 DRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGH 378
F +++I + P+ L + D + W + + R+ ++ +
Sbjct: 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNL-QTRKKIKNFAKF 292
Query: 379 RQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE 425
+ + +L + D K +
Sbjct: 293 -NEDSVVKIACSDN--------------ILCLATSDDTFKTNAAIDQ 324
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 87.9 bits (216), Expect = 3e-19
Identities = 39/297 (13%), Positives = 80/297 (26%), Gaps = 17/297 (5%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV----YKERRCVRTYYGHRQAV 382
Q++T H + + A+ + + + C VK+W++ K +
Sbjct: 44 QINTL-NHGEVVCAVTISNPT-RHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYI 100
Query: 383 RDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDI 442
R G I S + R+K C V
Sbjct: 101 RSCKLLPDGCTLIVGGEASTLSIWD--LAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
C ++ ++ + + S D + D+ +
Sbjct: 159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218
Query: 503 IADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLD 562
+ ++ P +WLA + + +N+ ++ H+ SL
Sbjct: 219 QQHDFTSQIFSLGYCPTGEWLAVGMESSNV------EVLHVNKPDKYQLHLHESCVLSLK 272
Query: 563 FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
F+ + +S D W + K V +S + +VT D
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV-LSCDISVDD-KYIVTGSGD 327
Score = 55.6 bits (132), Expect = 1e-08
Identities = 21/226 (9%), Positives = 41/226 (18%), Gaps = 16/226 (7%)
Query: 265 EYLAKKQKKGKQSEEKPLEEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLP 324
L + S + + + L D + +
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
S + + + +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ + TG + ++ + H V + F
Sbjct: 230 LGYCPTGEWL----------------AVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKF 273
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDED 490
G F+S G D L W T G I + D+
Sbjct: 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319
Score = 53.7 bits (127), Expect = 5e-08
Identities = 11/120 (9%), Positives = 32/120 (26%), Gaps = 17/120 (14%)
Query: 303 HPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKL 362
P + + + + K + H + ++++ +S D +
Sbjct: 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNA 291
Query: 363 WEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
W + +V + +++ S D + ++EV
Sbjct: 292 WRT-PYGASIFQS-KESSSVLSCDISVDDK--------------YIVTGSGDKKATVYEV 335
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 87.2 bits (214), Expect = 1e-18
Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 57/295 (19%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSC----SMDCRVKLWEVYKERRCVRTYYGHRQAV 382
+ I ++ + P L ++ ++ +
Sbjct: 113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF 172
Query: 383 RDICFNNTGTNFISAIR----------------------WFPKSAHLLLSCSMDCRVKLW 420
+G+ + P + + S+D V++W
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232
Query: 421 EVYKEHRCVR------TYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF 474
+ R + GH+ +V + F G + +S DR +KLW+ ++ S
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292
Query: 475 TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILI 534
+ C + L +V ++ N++++ S D +L
Sbjct: 293 KTPNSGTCEVTYIGHKDFVL------------------SVATTQNDEYILSGSKDRGVLF 334
Query: 535 FSALNRFKLNRKKTFEGHMVAGYAC----SLDFSPDMSYLISGDADGKCYIWDWK 585
+ + N +GH + + P+ + +G D K IW +K
Sbjct: 335 WDKKSG---NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 69.8 bits (169), Expect = 4e-13
Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 16/183 (8%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVR------T 374
L Q G++ + P + + S+D V++W+ R +
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249
Query: 375 YYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYG 434
GH+ +V + F G + +S + L + + C TY G
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSL---DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 435 HRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRF-------TSRKVAYCVKFHP 487
H+ V + +S DR + WD +SG + S VA P
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 488 DED 490
+ +
Sbjct: 367 EYN 369
Score = 67.1 bits (162), Expect = 3e-12
Identities = 45/335 (13%), Positives = 97/335 (28%), Gaps = 45/335 (13%)
Query: 322 FLPKTQVHTWEGHTKGISA--IRWFPKSAHLLLSCSMDCRVKLWEVYKERR---CVRTYY 376
+P Q H+K I + +S L + L+ R +
Sbjct: 3 LVPYNQ---RANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSL 59
Query: 377 GHRQAVRDICFNNTGTNFISA-----IRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
H V + F+N G + + L+ S D E+ +
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAAN---KDPENLNTSS 116
Query: 432 YYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDED- 490
+R +CF+ G + DR +++WD E+ + + + +
Sbjct: 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 491 -----------KQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALN 539
+ S + K++A S+D + ++ +
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236
Query: 540 RFKLNR----KKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKA 595
F + R ++ GH S+ F+ D ++SG D +W+ + K
Sbjct: 237 GFLVERLDSENESGTGH--KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 294
Query: 596 HDGV-----------CISTLWHPHEPSKVVTAGWD 619
+ + ++ +++ D
Sbjct: 295 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 329
Score = 58.7 bits (140), Expect = 1e-09
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
T T+ GH + ++ +LS S D V W+ K + GHR +V +
Sbjct: 299 TCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDK-KSGNPLLMLQGHRNSVISV 356
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK 424
N + ++ + S DC+ ++W+ K
Sbjct: 357 AVANGSS--------LGPEYNVFATGSGDCKARIWKYKK 387
Score = 38.2 bits (87), Expect = 0.004
Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSA-----HLLLSCSMDCRVKLWEVYK 367
+ +GH + ++ S+ ++ + S DC+ ++W+ K
Sbjct: 340 GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 84.2 bits (206), Expect = 2e-18
Identities = 47/299 (15%), Positives = 88/299 (29%), Gaps = 33/299 (11%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
+ T GH KGI+A+ P L+S S D R+ W + H + +
Sbjct: 6 LKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSS------MHQDHSNLIVSLDN 54
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ + K + V T ++ +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD-- 112
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPT 507
+K S + VA ++ L + P
Sbjct: 113 -----------IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 161
Query: 508 MHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLD----- 562
++ SP+ ++A + KIL++ +R + F + +
Sbjct: 162 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 221
Query: 563 -FSPDMSYLISGDADGKCYIWDWKTT-KLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
+ + +G D +I+ K K+ K AH + LW PS +V++G D
Sbjct: 222 EEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGAD 278
Score = 60.7 bits (145), Expect = 2e-10
Identities = 19/168 (11%), Positives = 49/168 (29%), Gaps = 7/168 (4%)
Query: 303 HPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKL 362
+L + T + ++ ++ +S S
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178
Query: 363 WEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLL------SCSMDCR 416
+ + F + N IS + + + S+D
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238
Query: 417 VKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
+ ++ V + + ++ H+ V ++ + T +S+G D +K W+
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 54.2 bits (128), Expect = 3e-08
Identities = 16/120 (13%), Positives = 37/120 (30%), Gaps = 15/120 (12%)
Query: 303 HPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKL 362
+ +L+S + +T L+ + S+D + +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241
Query: 363 WEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
+ V + + ++ H+ V ++ + T L+S D +K W V
Sbjct: 242 YSVKRPMKIIKALNAHKDGVNNLLWETPST---------------LVSSGADACIKRWNV 286
Score = 53.8 bits (127), Expect = 4e-08
Identities = 30/252 (11%), Positives = 66/252 (26%), Gaps = 27/252 (10%)
Query: 368 ERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHR 427
++T GH + + + N L+S S D R+ W H+
Sbjct: 2 HDEVLKTISGHNKGITALTVNP------------------LISGSYDGRIMEWSSSSMHQ 43
Query: 428 CVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHP 487
H + + + + D T+ +
Sbjct: 44 ------DHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVL 97
Query: 488 DEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKK 547
D L + I + P S + ++A + + +
Sbjct: 98 TNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV---FKLSDLEVS 154
Query: 548 TFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHP 607
+ + SP +Y+ +GD GK ++D ++ ++ A I+ +
Sbjct: 155 FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWK 214
Query: 608 HEPSKVVTAGWD 619
+
Sbjct: 215 PAEKGANEEEIE 226
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 82.2 bits (201), Expect = 1e-17
Identities = 41/298 (13%), Positives = 83/298 (27%), Gaps = 50/298 (16%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
++H +KG+ +++ ++S D +K+W+ C R GH +V +
Sbjct: 6 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDK-NTLECKRILTGHTGSVLCL 61
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCR------------------------VKLWE 421
++ S+ + +W+
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 422 VYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY 481
+ + +SA DR +K+W+T + E + K
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK--R 179
Query: 482 CVKFHPDEDKQHLDIPVD----------MKYIADPTMHSMPAVTSSPNNKWLACQSMDNK 531
+ D+ + D + H +NK + + D K
Sbjct: 180 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK 239
Query: 532 ILIFSALNRFKLNRK------KTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
I ++ + +T H +G L F ++S D IWD
Sbjct: 240 IKVWDLVAALDPRAPAGTLCLRTLVEH--SGRVFRLQFDE--FQIVSSSHDDTILIWD 293
Score = 54.1 bits (128), Expect = 3e-08
Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 17/201 (8%)
Query: 427 RCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVA------ 480
+ + + V C +S D +K+WD + EC T +
Sbjct: 6 QRIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 481 --YCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSAL 538
+ + + + + H + NN + S D I ++
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 539 NRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG 598
+ + ++ GH A D Y++S D +W+ T + + H
Sbjct: 124 SPTDITLRRVLVGHRAAVNVV----DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 179
Query: 599 VCISTLWHPHEPSKVVTAGWD 619
+ VV+ D
Sbjct: 180 GIA---CLQYRDRLVVSGSSD 197
Score = 46.0 bits (107), Expect = 1e-05
Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 540 RFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV 599
R L R G C D ++SG D IWD T + + H G
Sbjct: 2 RHSLQRIHCRSET-SKGVYC---LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS 57
Query: 600 CISTLWHPH 608
+ +
Sbjct: 58 VLCLQYDER 66
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 77.7 bits (189), Expect = 6e-16
Identities = 40/294 (13%), Positives = 87/294 (29%), Gaps = 11/294 (3%)
Query: 328 VHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICF 387
GH K I+A+ L S + + W++ H + I
Sbjct: 5 DQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 388 NNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNT 447
+ G F + K S + ++ + +
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI-----AVAAC 118
Query: 448 GTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPT 507
+ + + ++ + + C++ ++ L +
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 508 MHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDM 567
+ +V S N +L K++ +S N F+L ++ H +SPD
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV--SWSPDN 236
Query: 568 SYLISGDADGKCYIWDWKTTKL--FKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
L +G D +W+ AH ++++ +E + +V+AG D
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE-TTIVSAGQD 289
Score = 57.7 bits (137), Expect = 2e-09
Identities = 25/197 (12%), Positives = 60/197 (30%), Gaps = 5/197 (2%)
Query: 427 RCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTS--RKVAYCVK 484
+ YGH +A+ + + G SA + ++ WD +G F + +K
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 485 FHPDEDKQHLDIPVDMKYI---ADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRF 541
D + +K + S + S D I + +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 542 KLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCI 601
+ ++ + + S D ++ G D K +++ + + I
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 602 STLWHPHEPSKVVTAGW 618
+++ + + +V
Sbjct: 183 TSVAFSNNGAFLVATDQ 199
Score = 54.6 bits (129), Expect = 2e-08
Identities = 29/257 (11%), Positives = 65/257 (25%), Gaps = 21/257 (8%)
Query: 370 RCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCV 429
+ YGH +A+ + + G L S + + W++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGK--------------TLFSADAEGHINSWDISTGISNR 48
Query: 430 RTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGE-----CISRFTSRKVAYCVK 484
H + I + G F + D + SG ++ +S+ + V
Sbjct: 49 VFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVS 108
Query: 485 FHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
D + + T + +S + +
Sbjct: 109 ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGA 168
Query: 545 RKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL 604
+ + S+ FS + ++L++ D K + +
Sbjct: 169 SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 228
Query: 605 WHPHEP--SKVVTAGWD 619
P ++ T D
Sbjct: 229 CVSWSPDNVRLATGSLD 245
Score = 51.9 bits (122), Expect = 2e-07
Identities = 21/163 (12%), Positives = 42/163 (25%), Gaps = 1/163 (0%)
Query: 303 HPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKL 362
++ S+ + + + + S +
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193
Query: 363 WEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
+ R V Y + T A + L + S+D V +W +
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253
Query: 423 YK-EHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
K + H + + T +SAG D +K W+
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 39.6 bits (90), Expect = 0.002
Identities = 13/103 (12%), Positives = 25/103 (24%), Gaps = 15/103 (14%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYK-ERRCVRTYYGHR 379
+ A + L + S+D V +W + K + H
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA 268
Query: 380 QAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
+ + ++S D +K W V
Sbjct: 269 MSSVNSVIWLNE--------------TTIVSAGQDSNIKFWNV 297
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 76.5 bits (186), Expect = 2e-15
Identities = 49/355 (13%), Positives = 110/355 (30%), Gaps = 68/355 (19%)
Query: 322 FLPKTQVHTWEGHTKG-ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
F+P Q T GH I+ +++ + +++ + D +++++ ++ + GH
Sbjct: 1 FVP--QRTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDS-INKKFLLQLSGHDG 54
Query: 381 AVRDICFNNTGT-----------------------------NFISAIRWFPKSAHLLLSC 411
V + + + G K+ +++
Sbjct: 55 GVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 114
Query: 412 SMDCRVKLWEVYKE----------------------HRCVRTYYGHRQAVRDICFNNTGT 449
S D + +W++ KE V GH +VR + G
Sbjct: 115 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGN 172
Query: 450 NFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMH 509
+S YD L +WD +C+ + + E K+ + +D +
Sbjct: 173 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 232
Query: 510 SMPAVTSSPNNKWLACQSMDNKILIFSA----LNRFKLNRKKTFEGHMVAGYACSLDFSP 565
T + + + +K L+ +A + + N + + F
Sbjct: 233 GELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYV 292
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKK-WKAHDGVCISTLWHPHEPSKVVTAGWD 619
+ L+SG + + I++ ++ KL S + + V D
Sbjct: 293 SDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK--TLVAAVEKD 344
Score = 56.1 bits (133), Expect = 1e-08
Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 20/278 (7%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
++ K+ +++ S D + +W++ KE H
Sbjct: 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140
Query: 381 AVRDI------CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYG 434
+ F ++++R ++++S S D + +W+V + +C+ G
Sbjct: 141 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDV-AQMKCLYILSG 199
Query: 435 HRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHL 494
H + +++ ISA D +++WD E+GE + + D+
Sbjct: 200 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSA 259
Query: 495 DIPVDMKYIADPTMHSMP--------AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRK 546
++ A+T+ + + +N+ I++ + +
Sbjct: 260 AADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLV--H 317
Query: 547 KTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDW 584
A S++F + + + + DG+ ++
Sbjct: 318 ANILKD--ADQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 76.0 bits (185), Expect = 5e-15
Identities = 44/358 (12%), Positives = 87/358 (24%), Gaps = 69/358 (19%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
+ + H I ++ +SCS D +K+W+ + V
Sbjct: 5 ATANAGKAHDADIFSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS 61
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYK---------EHRCVRTYYGHR 436
++ + + AI L+ + S + + + + E + +
Sbjct: 62 GLHH--VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKK 119
Query: 437 QAVRDICFNNTGTN-----FISAGYDRYLKLWDTES-------------------GECIS 472
+ + + + ++ +W G S
Sbjct: 120 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 179
Query: 473 RFTSRKVAYCVKFHPDE-------------DKQHLDIPVDMKYIADPTMHSMPAVTS--- 516
T + A V + P+ +++ ++ S
Sbjct: 180 PMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239
Query: 517 SPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG-----------HMVAGYACSLDFSP 565
SP LA N + R + + + SL F+
Sbjct: 240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 299
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAHDG----VCISTLWHPHEPSKVVTAGWD 619
L S DGK WD KT + H H S +D
Sbjct: 300 SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 71.5 bits (173), Expect = 8e-14
Identities = 25/272 (9%), Positives = 69/272 (25%), Gaps = 18/272 (6%)
Query: 328 VHTWEGH-TKGISAIRWFP-KSAHLLLSCSMDCRVKLWEVYKERRCV-------RTYYGH 378
V + GH + ++ +++ P K + L S +V +W ++ +
Sbjct: 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 114
Query: 379 RQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQA 438
+ DI ++ G + S + ++ +
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174
Query: 439 VRDICFNNTGTNFISAGYDRYLKLWDTE-------SGECISRFTSRKVAYCVKFHPDEDK 491
+ + + + + E +
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 492 QHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEG 551
+ + S +++ A D I ++ + K +K T +
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWD-VTTSKCVQKWTLDK 293
Query: 552 HMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
+ + + + +IS DG ++
Sbjct: 294 QQLGNQQVGVVATGN-GRIISLSLDGTLNFYE 324
Score = 68.4 bits (165), Expect = 9e-13
Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 42/311 (13%)
Query: 338 ISAIRWFPKSAHLLLSCSMDCRVKLWEVY-KERRCVRTYYGHRQAVRDICFNNTGTNFIS 396
+ + + P + + C V+ + + V + GH G++ ++
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH------------GSSVVT 67
Query: 397 AIRWFP-KSAHLLLSCSMDCRVKLWEVYKEHRCV-------RTYYGHRQAVRDICFNNTG 448
+++ P K + L S +V +W + + + DI ++ G
Sbjct: 68 TVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG 127
Query: 449 TNFISAGY--DRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADP 506
G D + +SG + + D +
Sbjct: 128 RRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFY 187
Query: 507 TMHSMP----------------AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFE 550
V SP++ ++ + + + +
Sbjct: 188 QGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD 247
Query: 551 GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGV--CISTLWHPH 608
V G +L + D + AD +WD T+K +KW
Sbjct: 248 QEPVQGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 306
Query: 609 EPSKVVTAGWD 619
++++ D
Sbjct: 307 GNGRIISLSLD 317
Score = 49.5 bits (116), Expect = 1e-06
Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 5/192 (2%)
Query: 306 HDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV 365
D+ + + ++ V
Sbjct: 119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178
Query: 366 YKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE 425
+ V + ++ +F+ + + P S +++ D ++ ++
Sbjct: 179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 238
Query: 426 HRCVRTYYGHRQAVRDIC--FNNTGTNFISAGYDRYLKLWDTESGECISRFT---SRKVA 480
I F + G D +++WD + +C+ ++T +
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Query: 481 YCVKFHPDEDKQ 492
V + +
Sbjct: 299 QQVGVVATGNGR 310
Score = 48.4 bits (113), Expect = 3e-06
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 12/102 (11%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
+ + + + D +++W+V +CV+ + +Q
Sbjct: 236 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV-TTSKCVQKWTLDKQ 294
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEV 422
+ + + ++S S+D + +E+
Sbjct: 295 QLGNQQ-----------VGVVATGNGRIISLSLDGTLNFYEL 325
Score = 36.0 bits (81), Expect = 0.017
Identities = 24/163 (14%), Positives = 36/163 (22%), Gaps = 42/163 (25%)
Query: 475 TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILI 534
T R + + P +A + +
Sbjct: 15 TQRNFTTHLSYDPT-------------------------------TNAIAYPCGKSAFVR 43
Query: 535 FSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS--YLISGDADGKCYIWDWKTTKLF-- 590
K+ F GH + + FSP YL SGD GK +W W K
Sbjct: 44 CLDDGDSKVPPVVQFTGHGSSVVTT-VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 102
Query: 591 ------KKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
+++ G W V
Sbjct: 103 VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 145
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 69.5 bits (168), Expect = 5e-13
Identities = 29/271 (10%), Positives = 66/271 (24%), Gaps = 29/271 (10%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDI 385
QVH + H ++ + W P S + +++C D +W +
Sbjct: 42 VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARC 100
Query: 386 CFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFN 445
+ + D V V + H +V +
Sbjct: 101 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160
Query: 446 NTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIAD 505
+++ E R + F +
Sbjct: 161 CDFK----------CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS------------ 198
Query: 506 PTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSP 565
+ + V S N +A S D+ + + A + ++ F
Sbjct: 199 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-----AVATLASETLPLLAVTFIT 253
Query: 566 DMSYLISGDADGKCYIWDWKTTKLFKKWKAH 596
+ S + +G D ++ + + +
Sbjct: 254 ESSLVAAG-HDCFPVLFTYDSAAGKLSFGGR 283
Score = 66.8 bits (161), Expect = 4e-12
Identities = 36/274 (13%), Positives = 67/274 (24%), Gaps = 48/274 (17%)
Query: 378 HRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVY-KEHRCVRTYYGHR 436
+ + +N T + C + V ++E + V H
Sbjct: 6 LVEPISCHAWNKDRT--------------QIAICPNNHEVHIYEKSGNKWVQVHELKEHN 51
Query: 437 QAVRDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQH--- 493
V + + ++ G DR +W + ++ + +
Sbjct: 52 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA 111
Query: 494 ------------LDIPVDMKYIADPTMHSMPAVTSSPNNKWLA---CQSMDNKILIFSAL 538
+ D V S + S D K IFSA
Sbjct: 112 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Query: 539 NRFKLNRKKT-------------FEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWK 585
+ R FE G+ + FS + S + D + D
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 231
Query: 586 TTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
+ ++ + S +V AG D
Sbjct: 232 KKMAVATLASETLPLLAVTFITE--SSLVAAGHD 263
Score = 57.9 bits (138), Expect = 2e-09
Identities = 14/115 (12%), Positives = 35/115 (30%), Gaps = 3/115 (2%)
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLIS 572
+ + +A ++++ I+ K + + H G +D++PD + +++
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEH--NGQVTGVDWAPDSNRIVT 68
Query: 573 GDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQD 627
D Y+W K + K G + +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Score = 47.2 bits (110), Expect = 7e-06
Identities = 32/250 (12%), Positives = 72/250 (28%), Gaps = 37/250 (14%)
Query: 342 RWFPKSAHLLLSCSMDCRVKLWEVY-KERRCVRTYYGHRQAVRDICFNNTGTNFISAIR- 399
+ ++ LL + S D + +++ Y KE + ++ +
Sbjct: 147 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 206
Query: 400 -WFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDR 458
F + + S D V L + + + T ++ ++AG+D
Sbjct: 207 VCFSANGSRVAWVSHDSTVCLADA--DKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264
Query: 459 YLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSP 518
+ L+ +S F LD+P +
Sbjct: 265 FPVLFTYDSAAGKLSFGG----------------RLDVP-----------KQSSQRGLTA 297
Query: 519 NNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGK 578
++ Q++D K + + + V+ + S + DG
Sbjct: 298 RERF---QNLDKKASSEGSAAAGA--GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG 352
Query: 579 CYIWDWKTTK 588
IWD ++ +
Sbjct: 353 MSIWDVRSLE 362
Score = 43.3 bits (100), Expect = 1e-04
Identities = 19/153 (12%), Positives = 46/153 (30%), Gaps = 21/153 (13%)
Query: 321 CFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQ 380
++ ++ + + + L++ DC L+ Y ++ G
Sbjct: 227 LADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF-TYDSAAGKLSFGGRLD 285
Query: 381 AVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVR 440
+ + ++A F ++D + + + H+ +V
Sbjct: 286 VPKQ-----SSQRGLTARERF---------QNLDKKASSEGSAAAGAGLDS--LHKNSVS 329
Query: 441 DICF----NNTGTNFISAGYDRYLKLWDTESGE 469
I + F + G D + +WD S E
Sbjct: 330 QISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 68.8 bits (166), Expect = 5e-13
Identities = 35/277 (12%), Positives = 77/277 (27%), Gaps = 12/277 (4%)
Query: 350 LLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISA-----IRWFPKS 404
+ C+ V V Y H + +G S +R + +
Sbjct: 31 KIQYCN-GTSVYTVPV-GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 88
Query: 405 AHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWD 464
+ + + ++ + + AV + G
Sbjct: 89 QT---THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ 145
Query: 465 TESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLA 524
+ + SR + P K + +V +P+ A
Sbjct: 146 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 205
Query: 525 CQSMDNKILIFSALN--RFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIW 582
D I++++ ++ + + + + +G L +SPD + + S AD IW
Sbjct: 206 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 265
Query: 583 DWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWD 619
+ T K+ K + L +V+ +
Sbjct: 266 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
Score = 68.4 bits (165), Expect = 8e-13
Identities = 38/266 (14%), Positives = 80/266 (30%), Gaps = 13/266 (4%)
Query: 326 TQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYY-GHRQAVRD 384
T + H+ + + P S + S + V++W+ + ++T V+D
Sbjct: 49 TDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD 107
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
I +++ + + H+ L + L + V +
Sbjct: 108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 167
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAY-------CVKFHPDEDKQHLDIP 497
+NT F + + R+ + + + D +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
D S+ +T SP+ +A S D I I++ + K+ +KT
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN-VATLKV--EKTIPVGTRIED 284
Query: 558 ACSLDFSPDMSYLISGDADGKCYIWD 583
L L+S A+G +
Sbjct: 285 QQ-LGIIWTKQALVSISANGFINFVN 309
Score = 52.2 bits (123), Expect = 1e-07
Identities = 15/151 (9%), Positives = 33/151 (21%), Gaps = 3/151 (1%)
Query: 317 PPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYY 376
K + +
Sbjct: 163 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 222
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
D N + + + W P + S S D +K+W V + +T
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNV-ATLKVEKTIPVGT 280
Query: 437 Q-AVRDICFNNTGTNFISAGYDRYLKLWDTE 466
+ + + T +S + ++ + E
Sbjct: 281 RIEDQQLGIIWTKQALVSISANGFINFVNPE 311
Score = 44.9 bits (104), Expect = 3e-05
Identities = 12/107 (11%), Positives = 23/107 (21%), Gaps = 14/107 (13%)
Query: 315 DTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRT 374
+ G + + S S D +K+W V + +T
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV-ATLKVEKT 275
Query: 375 YYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWE 421
T + L+S S + +
Sbjct: 276 IPVG-------------TRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 44.5 bits (103), Expect = 4e-05
Identities = 14/217 (6%), Positives = 39/217 (17%), Gaps = 9/217 (4%)
Query: 283 EEKTILHIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIR 342
+ P S + + GH
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 137
Query: 343 WFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFP 402
+ + + + G +
Sbjct: 138 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 197
Query: 403 KSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAV-------RDICFNNTGTNFISAG 455
L + + + + + + ++ GT SA
Sbjct: 198 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 257
Query: 456 YDRYLKLWDTESGECISRFT--SRKVAYCVKFHPDED 490
D+ +K+W+ + + +R + +
Sbjct: 258 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 65.9 bits (159), Expect = 6e-12
Identities = 31/310 (10%), Positives = 72/310 (23%), Gaps = 41/310 (13%)
Query: 326 TQVHTWE-GHTKGISAIRWFPKSAHLLLSCSMDCRVKLW-----EVYKERRCVRTYYGHR 379
T + G P + + + + +
Sbjct: 29 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVG 88
Query: 380 QAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAV 439
+++ + G + + + + V E + VRT+ RQ V
Sbjct: 89 RSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ-V 147
Query: 440 RDICFNNTGTNFISAGYDRYLKLWDTESGECISRF------------------------- 474
+ + G+ +++ D ++G+
Sbjct: 148 YLMRAADDGSLYVAGPDIY---KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 204
Query: 475 -TSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWL--ACQSMDNK 531
+ +F D+ + D + + +S +
Sbjct: 205 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 264
Query: 532 ILIFSALNRFKLNRKKTFE---GHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTK 588
I+ LNR K + + + F L G +++ T +
Sbjct: 265 NQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
Query: 589 LFKKWKAHDG 598
K K G
Sbjct: 325 KVKNIKLPGG 334
Score = 45.1 bits (105), Expect = 3e-05
Identities = 23/205 (11%), Positives = 43/205 (20%), Gaps = 33/205 (16%)
Query: 444 FNNTGTNFISAGYDRYLKLWDTESGECISRFT--SRKVAYCVKFHPD------------- 488
I Y L + D S + PD
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 489 -----EDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKL 543
D ++ + SM + SP+ K + + L + +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 544 NR---------KKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWK 594
K + + + D S ++G K + K T
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRN 183
Query: 595 AHDGVCIS----TLWHPHEPSKVVT 615
+ + W P +
Sbjct: 184 WNRKGYSAPDVLYFWPHQSPRHEFS 208
Score = 35.5 bits (80), Expect = 0.033
Identities = 9/72 (12%), Positives = 18/72 (25%), Gaps = 2/72 (2%)
Query: 563 FSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL-WHPHEPSKVVTAGWDAA 621
Y+I + ++ D + ++K D T P +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYG 62
Query: 622 TAKVQDANIVKI 633
D + K
Sbjct: 63 DIYGIDLDTCKN 74
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 60.3 bits (144), Expect = 5e-10
Identities = 25/286 (8%), Positives = 56/286 (19%), Gaps = 43/286 (15%)
Query: 327 QVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDIC 386
+ +E + + A+ + D + + + + D
Sbjct: 77 KAEKFEENLGNVFAMGVDRN--GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFT 134
Query: 387 FNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNN 446
++ + + ++++ E R + F+
Sbjct: 135 ISDNSRFIAYGFPLKHGETD----GYVMQAIHVYDM--EGRKIFAATTENSHDYAPAFDA 188
Query: 447 TGTNFISAGYDRYLKLWDTESGECISRFTSRKVA--------YCVKFHPDE--------- 489
N Y D S+ K P
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248
Query: 490 ----DKQHLDIPVDMKYIADPTMHSMP-----AVTSSPNNKWLACQSMDNKILIFSALNR 540
K+ I VD + +L +
Sbjct: 249 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV--- 305
Query: 541 FKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKT 586
+ + L S D ++ DGK Y + +
Sbjct: 306 ----KTRKVTEV--KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
Score = 53.7 bits (127), Expect = 5e-08
Identities = 12/155 (7%), Positives = 34/155 (21%), Gaps = 18/155 (11%)
Query: 319 DRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSM--DCRVKLWEVYKERRCVRTYY 376
+ F ++ + + P+S D + + + R
Sbjct: 211 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII 270
Query: 377 GHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHR 436
++ + A + ++V R +
Sbjct: 271 PLESSILIYSVP-----------VHGEFAAYYQGAPEKGVLLKYDVKT-----RKVTEVK 314
Query: 437 QAVRDICFNNTGTNFISAGYDRYLKLWDTESGECI 471
+ D+ + + D + + E E
Sbjct: 315 NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349
Score = 28.3 bits (61), Expect = 5.9
Identities = 1/49 (2%), Positives = 9/49 (18%)
Query: 560 SLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH 608
+ D ++ + + + + +
Sbjct: 47 YVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDR 95
Score = 27.5 bits (59), Expect = 8.5
Identities = 8/94 (8%), Positives = 14/94 (14%)
Query: 513 AVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLIS 572
V + K + R K V + +
Sbjct: 47 YVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR 106
Query: 573 GDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWH 606
+ T + IS
Sbjct: 107 FEIMTVDLETGKPTVIERSREAMITDFTISDNSR 140
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 56.0 bits (133), Expect = 1e-08
Identities = 27/315 (8%), Positives = 62/315 (19%), Gaps = 40/315 (12%)
Query: 326 TQVHTWEGHTKGIS--AIRWFPKSAHLLLSCSMDCRVKLWEV----YKERRCVRTYYGHR 379
G + P + + + ++ R + T
Sbjct: 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81
Query: 380 QAVRDICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAV 439
+++ + G E R + + +
Sbjct: 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV----ALYDAETLSRRKAFEAPRQI 137
Query: 440 RDICFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVD 499
+ + G+ G D ++ + G + + PD
Sbjct: 138 TMLAWARDGSKLYGLGRDLHVMDPEA--GTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195
Query: 500 MKYIADPTMHSMPAVT---------------------------SSPNNKWLACQSMDNKI 532
A +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 533 LIFSA-LNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFK 591
L F L + + + + S++ S D S + G A G +D +T +
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315
Query: 592 KWKAHDGVCISTLWH 606
+ +S
Sbjct: 316 QVDLPGNASMSLASV 330
Score = 43.3 bits (100), Expect = 9e-05
Identities = 19/194 (9%), Positives = 40/194 (20%), Gaps = 28/194 (14%)
Query: 451 FISAGYDRYLKLWDTESGECISRFT---SRKVAYCVKFHPDEDK---------------- 491
++ L + DTE T + P
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 492 -QHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFK------LN 544
+ + + S+ SP+ K LA ++ + +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 545 RKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTL 604
+ L ++ D S L D ++ D + L + +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 605 WHPHEPSKVVTAGW 618
Sbjct: 182 QPDVLAVWNQHESS 195
Score = 31.3 bits (69), Expect = 0.58
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 11/69 (15%)
Query: 569 YLISGDADGKCYIWDWKTTKLFKKWKAHD------GVCIS----TLWHPHEPSKVVTAGW 618
Y+++ K + D + + K D ++ + S+ +
Sbjct: 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK-I 61
Query: 619 DAATAKVQD 627
D T +
Sbjct: 62 DLVTGETLG 70
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 52.6 bits (124), Expect = 1e-07
Identities = 18/285 (6%), Positives = 49/285 (17%), Gaps = 18/285 (6%)
Query: 325 KTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRD 384
T P + ++ + V + + G
Sbjct: 22 NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80
Query: 385 ICFNNTGTNFISAIRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICF 444
+ + + + S + + G + V +
Sbjct: 81 VSPDGKQVYVTNMASSTLSVID---TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD 137
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIA 504
KV + +
Sbjct: 138 KTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197
Query: 505 DPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFS 564
S AV ++ + K+ + +
Sbjct: 198 VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI--TARIPVG---PDPAGIAVT 252
Query: 565 PDMSYL-ISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH 608
PD + ++ + D T + ++ +P+
Sbjct: 253 PDGKKVYVALSFCNTVSVIDTATNTITAT--------MAVGKNPY 289
Score = 42.2 bits (97), Expect = 2e-04
Identities = 11/187 (5%), Positives = 33/187 (17%), Gaps = 7/187 (3%)
Query: 289 HIKDPTDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSA 348
T P + + KT I+ +
Sbjct: 102 DTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPK 161
Query: 349 HLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLL 408
+ ++ + T + +G +
Sbjct: 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVT---- 217
Query: 409 LSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTN-FISAGYDRYLKLWDTES 467
+ ++ I G +++ + + + DT +
Sbjct: 218 -NVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275
Query: 468 GECISRF 474
+
Sbjct: 276 NTITATM 282
Score = 32.9 bits (73), Expect = 0.16
Identities = 5/38 (13%), Positives = 11/38 (28%)
Query: 451 FISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPD 488
+I+ + + D S + + PD
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPD 42
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 49.8 bits (117), Expect = 8e-07
Identities = 16/166 (9%), Positives = 42/166 (25%), Gaps = 16/166 (9%)
Query: 324 PKTQVHTWEGHTKGISAIRWFPKSA-----HLLLSCSMDCRVKLWEVY-KERRCVRTYYG 377
+ A L+ + ++ ++ + + +
Sbjct: 177 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA 236
Query: 378 HRQAVRDICFNNTGTNFISA------IRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRT 431
+A R + G ++ I + V + + K +
Sbjct: 237 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA-KTGERLAK 295
Query: 432 YYGHRQAVRDICFNNTGTN--FISAGYDRYLKLWDTESGECISRFT 475
+ + I + + + D+ L + D ESGE +
Sbjct: 296 FEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340
Score = 45.9 bits (107), Expect = 2e-05
Identities = 14/197 (7%), Positives = 41/197 (20%), Gaps = 2/197 (1%)
Query: 294 TDYQGRSFLHPPHDVGTNLRSDTPPDRCFLPKTQVHTWEGHTKG-ISAIRWFPKSAHLLL 352
T + D + + + +
Sbjct: 114 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV 173
Query: 353 SCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIRWFPKSAHLLLSCS 412
+ + ++ H + T + S +
Sbjct: 174 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Query: 413 MDCRVKLW-EVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYDRYLKLWDTESGECI 471
++ + + HR R + + R++ + D ++GE +
Sbjct: 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 293
Query: 472 SRFTSRKVAYCVKFHPD 488
++F + D
Sbjct: 294 AKFEMGHEIDSINVSQD 310
Score = 40.9 bits (94), Expect = 5e-04
Identities = 15/203 (7%), Positives = 41/203 (20%), Gaps = 24/203 (11%)
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTS--------------------RKVAYCVK 484
+ + Y++++D + + K +
Sbjct: 65 STVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 485 FHPDEDKQHLDIPVDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLN 544
F P +D+ + + + + + + + +
Sbjct: 125 FSPAPAVGVVDLE-GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 183
Query: 545 RKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKL--FKKWKAHDGVCIS 602
+S L+ GK + D + +A +
Sbjct: 184 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 243
Query: 603 TLWHPHEPSKVVTAGWDAATAKV 625
W P V +
Sbjct: 244 DGWRPGGWQ-QVAYHRALDRIYL 265
Score = 38.6 bits (88), Expect = 0.003
Identities = 11/111 (9%), Positives = 29/111 (26%), Gaps = 22/111 (19%)
Query: 513 AVTSSPNNKWL-----ACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDM 567
+P+ + + A + + + G + G+ + + D
Sbjct: 6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDG-------EAGRVIGMIDGGFLPNPVVADDG 58
Query: 568 SYL----------ISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPH 608
S++ G+ ++D T + D +P
Sbjct: 59 SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW 109
Score = 38.2 bits (87), Expect = 0.004
Identities = 24/189 (12%), Positives = 44/189 (23%), Gaps = 26/189 (13%)
Query: 449 TNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTM 508
+ + D E+G I + D +IA
Sbjct: 19 NDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDG-----------SFIA---- 62
Query: 509 HSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGH--MVAGYACSLDFSPD 566
+S +A + + +F + + + +V Y +PD
Sbjct: 63 ------HASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 116
Query: 567 MSYLISGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQ 626
L+ + K +K V P P D + AKV
Sbjct: 117 GKTLLFYQFSPAPAVGVVDLEG--KAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVA 174
Query: 627 DANIVKIAV 635
+
Sbjct: 175 FGTEGTPEI 183
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 49.8 bits (118), Expect = 1e-06
Identities = 20/191 (10%), Positives = 41/191 (21%), Gaps = 38/191 (19%)
Query: 440 RDICFNNTGTN--FISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIP 497
+ N ++ + L D + E + + + +
Sbjct: 22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRL------------ 69
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIF--SALNRFKLNRKKTFEGHMVA 555
S + ++L D K+ + + K
Sbjct: 70 -------------------SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA--R 108
Query: 556 GYACSLDFSPDMSYLI-SGDADGKCYIWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVV 614
S + Y I + I D +T + K +HP +
Sbjct: 109 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 168
Query: 615 TAGWDAATAKV 625
A V
Sbjct: 169 LASHYRPEFIV 179
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 46.9 bits (110), Expect = 9e-06
Identities = 19/183 (10%), Positives = 47/183 (25%), Gaps = 34/183 (18%)
Query: 440 RDICFNNTGTN--FISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIP 497
+ + N ++ + L D +S + + + + +
Sbjct: 22 KKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRM------------ 69
Query: 498 VDMKYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGY 557
S + ++L D +I + + + G
Sbjct: 70 -------------------SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV 110
Query: 558 ACSLDFSPDMSYLISGDADGKCY-IWDWKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTA 616
S + Y I+G + I D +T + + + +HP + A
Sbjct: 111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 170
Query: 617 GWD 619
+
Sbjct: 171 SHE 173
Score = 43.0 bits (100), Expect = 2e-04
Identities = 15/124 (12%), Positives = 29/124 (23%), Gaps = 11/124 (8%)
Query: 501 KYIADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACS 560
+ N + +I + ++ + T G+ V
Sbjct: 13 VLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GYAVHI---- 66
Query: 561 LDFSPDMSYLISGDADGKCYIWDWKTTKLFKKW-----KAHDGVCISTLWHPHEPSKVVT 615
S YL+ D + + D + K V S + +
Sbjct: 67 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAG 126
Query: 616 AGWD 619
A W
Sbjct: 127 AYWP 130
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 41.9 bits (97), Expect = 2e-04
Identities = 16/192 (8%), Positives = 35/192 (18%), Gaps = 20/192 (10%)
Query: 445 NNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVK----FHPD-----------E 489
+ +++ D + +
Sbjct: 35 TTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANI 94
Query: 490 DKQHLDIPVDMKYIADPTMHSMP-AVTSSPNNKWL-ACQSMDNK-ILIFSALNRFKLNRK 546
+D + V + P K + + N + R
Sbjct: 95 TPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRT 154
Query: 547 KTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWDWKTTKLF--KKWKAHDGVCISTL 604
+ V ++ S + G D+ K K W +
Sbjct: 155 MSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEG 214
Query: 605 WHPHEPSKVVTA 616
W P +
Sbjct: 215 WRPGGMQQTAVQ 226
Score = 36.1 bits (82), Expect = 0.019
Identities = 9/172 (5%), Positives = 30/172 (17%), Gaps = 29/172 (16%)
Query: 324 PKTQVHTWEGHTKGISAIRWFP-KSAHLLLSCSMDCRVKLWEVYK-ERRCVRTYYGHRQA 381
+ + + L + V+ + + + + A
Sbjct: 150 EAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDA 209
Query: 382 VRDICFNNTGTNFISAIR------WFP----------KSAHLLLSCSMDCRVKLWEVYKE 425
R + G + + + +
Sbjct: 210 ERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWD-LA 268
Query: 426 HRCVRTYYGHRQAVRDICFNNTGTN--FISAGYDRYLKLWDTESGECISRFT 475
+ V + I + + + + D +G
Sbjct: 269 QQKVEP-------LVSIQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEK 312
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 40.2 bits (92), Expect = 0.001
Identities = 28/279 (10%), Positives = 58/279 (20%), Gaps = 22/279 (7%)
Query: 333 GHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEV--YKERRCVRTYYGHRQAVRDICFNNT 390
+ + P +L + + RV + + ++ I ++
Sbjct: 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ 93
Query: 391 GTNFISAIRWFPKSAHLLLSCSMDCRVKLW--------EVYKEHRCVRTYYGHRQAVRDI 442
G + L + V + + R
Sbjct: 94 GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153
Query: 443 CFNNTGTNFISAGYDRYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKY 502
F + + A + + + + + AYCV
Sbjct: 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213
Query: 503 IADPTMHSMPAVTSSPNNKWLACQSMDNKILIFSALNRFKL--------NRKKTFEGHM- 553
T+ MP S + D + L + + EG
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 273
Query: 554 VAGYACSLDFSPDMSYLISGDADG---KCYIWDWKTTKL 589
+ YLI+ Y + L
Sbjct: 274 TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 38.0 bits (87), Expect = 0.005
Identities = 14/173 (8%), Positives = 33/173 (19%), Gaps = 11/173 (6%)
Query: 309 GTNLRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWFPKSAHLLLSCSMDCRVKLWEVYKE 368
+ SD A L+ + +
Sbjct: 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-QANYPGMLVWAVASSILQGDIP-AAG 242
Query: 369 RRCVRTYYGHRQAVRDICFNNTGTNFISA-----IRWFPKSAHLLLSCSMDCRVKLWEVY 423
G+ + F + G ++ H +
Sbjct: 243 ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA- 301
Query: 424 KEHRCVRTYYGHRQAVRDICFNNTGTN--FISAGYDRYLKLWDTESGECISRF 474
+ + I G + + ++ L ++D S + S
Sbjct: 302 SVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
Score = 37.7 bits (86), Expect = 0.005
Identities = 16/213 (7%), Positives = 38/213 (17%), Gaps = 14/213 (6%)
Query: 290 IKDPTDYQGRSFLHPPHDVGTN-----LRSDTPPDRCFLPKTQVHTWEGHTKGISAIRWF 344
I+ P + L + + TK S
Sbjct: 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIH 171
Query: 345 PKSAHLLLSCSMDCRVKLW-----EVYKERRCVRTYYGHRQAVRDICFNNTGTNFISAIR 399
P +A S + + + + N G +
Sbjct: 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVAS 231
Query: 400 ----WFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAG 455
+A + ++D + + I +
Sbjct: 232 SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291
Query: 456 YDRYLKLWDTESGECISRFTSRKVAYCVKFHPD 488
G+ ++ + + D
Sbjct: 292 AAENTSSVTASVGQTSGPISNGHDSDAIIAAQD 324
Score = 35.3 bits (80), Expect = 0.032
Identities = 10/104 (9%), Positives = 22/104 (21%), Gaps = 16/104 (15%)
Query: 551 GHMVAGYACSLDFSPDMSYLI----------SGDADGKCYIWDWKTTKLFKKWKAHDGVC 600
GH + + S G ++D T + D
Sbjct: 60 GHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119
Query: 601 ISTLWHPH------EPSKVVTAGWDAATAKVQDANIVKIAVEME 638
S H + ++ + ++ A +
Sbjct: 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTK 163
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 35.8 bits (82), Expect = 0.032
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 897 FTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRTSV 951
F + FY +L KTW T + +++L+ D+ E G+T V
Sbjct: 616 FAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQ-QHNIDKEEIRMGKTKV 669
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 33.7 bits (75), Expect = 0.084
Identities = 18/195 (9%), Positives = 45/195 (23%), Gaps = 2/195 (1%)
Query: 338 ISAIRWFPKSAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDICFNNTGTNFISA 397
+ + W P + L R L VR + F+ G+ A
Sbjct: 41 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 100
Query: 398 IRWFPKSAHLLLSCSMDCRVKLWEVYKEHRCVRTYYGHRQAVRDICFNNTGTNFISAGYD 457
+ ++ + ++ + + + + +
Sbjct: 101 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 160
Query: 458 RYLKLWDTESGECISRFTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMP--AVT 515
+ E + S + V + +QH+ + +
Sbjct: 161 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPS 220
Query: 516 SSPNNKWLACQSMDN 530
+PN + S
Sbjct: 221 LAPNGTMVIYSSSQG 235
Score = 29.1 bits (63), Expect = 2.6
Identities = 38/254 (14%), Positives = 72/254 (28%), Gaps = 29/254 (11%)
Query: 474 FTSRKVAYCVKFHPDEDKQHLDIPVDMKYIADPTMHSMPAVTS----------SPNNKWL 523
F +R +AY V+ + + L ++D ++ V SP+ L
Sbjct: 2 FRTR-IAYVVQTNGGQFPYEL-------RVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKL 53
Query: 524 ACQSMDNKILIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMSYLISGDADGKCYIWD 583
A + ++ ++ G FSPD S L +
Sbjct: 54 AYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPA---FSPDGSKLAFALSKTGSLNLY 110
Query: 584 WKTTKLFKKWKAHDGVCISTLWHPHEPSKVVTAGWDAATAKVQDANIVKIAVEMEKQVPQ 643
S P + + A V I +++
Sbjct: 111 VMDL--ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW 168
Query: 644 LYQFNQTLTLSSIIQEICSGWSLSDSEQYALQFSETNNKNYITEKNRNEI----KNGSVL 699
NQ +SS + + S + A Q T ++ +E NG+
Sbjct: 169 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGT-- 226
Query: 700 RLAFSASKTADDIL 713
+ +S+S+ +L
Sbjct: 227 MVIYSSSQGMGSVL 240
>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 119
Score = 31.5 bits (71), Expect = 0.14
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 825 LIQQQRLGYLVEGTRFTKYSSRG 847
L L L++G++ K S
Sbjct: 2 LQDDPDLQALLKGSQLLKVKSSS 24
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 32.8 bits (74), Expect = 0.25
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 897 FTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRTSV 951
F + EF +L + + + +L + D E G T V
Sbjct: 659 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILA-GLQMDPAEYRLGTTKV 712
>d3bz6a1 a.4.5.75 (A:13-96) Hypothetical protein PSPTO2686
{Pseudomonas syringae pv. tomato [TaxId: 323]}
Length = 84
Score = 27.7 bits (62), Expect = 1.8
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 785 LTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYS 844
LT + + Q +TSR+ P++ L + + + ++ + L LV G+R ++
Sbjct: 31 LTLNALVIACNQ-KTSRD-------PVMNLTQGQVGQSLRALEGRGLTRLVMGSRADRWE 82
Query: 845 SR 846
+
Sbjct: 83 HK 84
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 29.7 bits (66), Expect = 2.1
Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 897 FTHDHPFEEFYCICIVLLNKTWKEMRATTEDFVKVVLENSCRADEHECPFGRTSV 951
F + F+EF +L + + ++++ + D + G++ +
Sbjct: 642 FPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIK-ALELDPNLYRIGQSKI 695
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB
{Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 29.0 bits (64), Expect = 3.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 247 TDEEKVSRPNEAQAAELEEYLAKKQKKGKQSEEKPLEEKT 286
T EEK+ + ELEE LA+ + +GK E + LE++T
Sbjct: 250 TREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRT 289
>d1ni7a_ d.224.1.1 (A:) Hypothetical protein YgdK {Escherichia coli
[TaxId: 562]}
Length = 149
Score = 27.9 bits (62), Expect = 3.6
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 10/73 (13%)
Query: 56 TDVNTKEITKNL--------RYEELYAPEYGPVNPFLTQQQRADKNTLSGFVEQAHINSF 107
T V + + +Y +L G P L + +A ++G + +
Sbjct: 13 TTVTAETLRNTFAPLTQWEDKYRQLI--MLGKQLPALPDELKAQAKEIAGCENRVWLGYT 70
Query: 108 QFENQRRTFASYG 120
EN + F
Sbjct: 71 VAENGKMHFFGDS 83
>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 131
Score = 27.2 bits (60), Expect = 5.3
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 833 YLVEGTRFTKYSSRGQVVLENSCRADEHE 861
YL +G RF K+ V R D
Sbjct: 6 YLSQGERFIKWDDETTVASPVILRVDPKG 34
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 28.1 bits (62), Expect = 7.0
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Query: 897 FTHDHPFEEFYCICIVLLNKTWKEMRATTE-DFVKVVLENSCRADEHECPFGRTSV 951
F + +F VL E + + +L D + FG T V
Sbjct: 662 FPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLG-GGDVDHTQYAFGHTKV 716
>d1at0a_ b.86.1.1 (A:) Hedgehog {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 145
Score = 26.7 bits (58), Expect = 9.1
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 321 CFLPKTQVHTWEGHTKGISAIR 342
CF P++ G K + +
Sbjct: 1 CFTPESTALLESGVRKPLGELS 22
>d1oa8a_ b.145.1.1 (A:) Ataxin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 128
Score = 26.6 bits (58), Expect = 9.4
Identities = 5/27 (18%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 316 TPPDRCFLPKTQVHTWEGHTKGISAIR 342
PP F+ + + G K + ++
Sbjct: 10 LPP--YFMKGSIIQLANGELKKVEDLK 34
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.405
Gapped
Lambda K H
0.267 0.0686 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,838,294
Number of extensions: 182628
Number of successful extensions: 764
Number of sequences better than 10.0: 1
Number of HSP's gapped: 577
Number of HSP's successfully gapped: 128
Length of query: 1019
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 925
Effective length of database: 1,116,976
Effective search space: 1033202800
Effective search space used: 1033202800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.2 bits)