Psyllid ID: psy3070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEEEccEEEEEccccEEccccccccccEEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEEEEccEEEEEEccEEEEEEEEccccEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEcc
Coil and Loop (DISEMBL)
mpligassrmsRLSTMFHTVEVGDTKFTILKRYqnlkpigsgaqgiVCAAYDTATQQNVAIKklsrpfqnvTHAKRAYREFKLMKLVNHKNVSH
Flexible Loop (DISEMBL)
mpligassrmsrlsTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAikklsrpfqnvtHAKRAYRefklmklvnhknvsh
Low Complexity Region (SEG)
MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH
Disordered region (IsUnstruct)
**************TMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV*******
Disordered Region (DISOPRED)
********************EVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK****
Disordered Region (DISEMBL)
**********SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH
Disordered Region (DISPRO)
*************STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
P92208	372	Stress-activated protein	no	N/A	0.882	0.223	0.819	5e-34
Q61831	464	Mitogen-activated protein	yes	N/A	0.872	0.176	0.756	1e-32
P49187	464	Mitogen-activated protein	yes	N/A	0.872	0.176	0.756	2e-32
P53779	464	Mitogen-activated protein	yes	N/A	0.872	0.176	0.756	2e-32
P45983	427	Mitogen-activated protein	no	N/A	0.872	0.192	0.743	1e-31
Q91Y86	384	Mitogen-activated protein	no	N/A	0.872	0.213	0.743	2e-31
P49185	411	Mitogen-activated protein	no	N/A	0.872	0.199	0.731	8e-31
O42099	427	Mitogen-activated protein	N/A	N/A	0.808	0.177	0.763	2e-30
Q90327	427	Mitogen-activated protein	N/A	N/A	0.808	0.177	0.763	2e-30
Q8QHK8	426	Mitogen-activated protein	N/A	N/A	0.872	0.192	0.707	8e-30

>sp|P92208|JNK_DROME Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1

 Score =  142 bits (359), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/83 (81%), Positives = 72/83 (86%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          M+      +TVEVGDT FTI  RY NL+PIGSGAQGIVCAAYDT TQQNVAIKKLSRPFQ
Sbjct: 1  MTTAQHQHYTVEVGDTNFTIHSRYINLRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQ 60

Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          NVTHAKRAYREFKLMKLVNHKN+
Sbjct: 61 NVTHAKRAYREFKLMKLVNHKNI 83

Responds to activation by environmental stress by phosphorylating a number of transcription factors, primarily components of AP-1 such as Jra and also the transcriptional repressor aop, and thus regulates transcriptional activity. Component of the immune response activated by bacterial infection, and is involved in wound healing and in dorsal closure, a morphogenetic movement during embryogenesis. Controls the expression of a phosphatase, puckered, at the edges of wounded epidermal tissue and in the dorsal epithelium during dorsal closure.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 4

>sp|Q61831|MK10_MOUSE Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 42  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
            THAKRAYRE  LMK VNHKN+
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNI 123

Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P49187|MK10_RAT Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 42  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
            THAKRAYRE  LMK VNHKN+
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNI 123

Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P53779|MK10_HUMAN Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 42  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
            THAKRAYRE  LMK VNHKN+
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNI 123

Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P45983|MK08_HUMAN Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2

 Score =  135 bits (339), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

JNK1 isoforms display different binding patterns: beta-1 preferentially binds to c-Jun, whereas alpha-1, alpha-2, and beta-2 have a similar low level of binding to both c-Jun or ATF2. However, there is no correlation between binding and phosphorylation, which is achieved at about the same efficiency by all isoforms.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q91Y86|MK08_MOUSE Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1

 Score =  134 bits (337), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

Serine/threonine-protein kinase involved in various processes such as cell proliferation, differentiation, migration, transformation and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK8/JNK1. In turn, MAPK8/JNK1 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN, JDP2 and ATF2 and thus regulates AP-1 transcriptional activity. Phosphorylates the replication licensing factor CDT1, inhibiting the interaction between CDT1 and the histone H4 acetylase HBO1 to replication origins. Loss of this interaction abrogates the acetylation required for replication initiation. Promotes stressed cell apoptosis by phosphorylating key regulatory factors including p53/TP53 and Yes-associates protein YAP1. In T-cells, MAPK8 and MAPK9 are required for polarized differentiation of T-helper cells into Th1 cells. Contributes to the survival of erythroid cells by phosphorylating the antagonist of cell death BAD upon EPO stimulation. Mediates starvation-induced BCL2 phosphorylation, BCL2 dissociation from BECN1, and thus activation of autophagy. Phosphorylates STMN2 and hence regulates microtubule dynamics, controlling neurite elongation in cortical neurons. In the developing brain, through its cytoplasmic activity on STMN2, negatively regulates the rate of exit from multipolar stage and of radial migration from the ventricular zone (By similarity). Phosphorylates several other substrates including heat shock factor protein 4 (HSF4), the deacetylase SIRT1, ELK1, or the E3 ligase ITCH.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P49185|MK08_RAT Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1

 Score =  132 bits (331), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 60/82 (73%), Positives = 69/82 (84%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+ D+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIADSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

Serine/threonine-protein kinase involved in various processes such as cell proliferation, differentiation, migration, transformation and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK8/JNK1. In turn, MAPK8/JNK1 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN, JDP2 and ATF2 and thus regulates AP-1 transcriptional activity. Phosphorylates the replication licensing factor CDT1, inhibiting the interaction between CDT1 and the histone H4 acetylase HBO1 to replication origins. Loss of this interaction abrogates the acetylation required for replication initiation. Promotes stressed cell apoptosis by phosphorylating key regulatory factors including p53/TP53 and Yes-associates protein YAP1. In T-cells, MAPK8 and MAPK9 are required for polarized differentiation of T-helper cells into Th1 cells. Contributes to the survival of erythroid cells by phosphorylating the antagonist of cell death BAD upon EPO stimulation. Mediates starvation-induced BCL2 phosphorylation, BCL2 dissociation from BECN1, and thus activation of autophagy. Phosphorylates STMN2 and hence regulates microtubule dynamics, controlling neurite elongation in cortical neurons. In the developing brain, through its cytoplasmic activity on STMN2, negatively regulates the rate of exit from multipolar stage and of radial migration from the ventricular zone (By similarity). Phosphorylates several other substrates including heat shock factor protein 4 (HSF4), the deacetylase SIRT1, ELK1, or the E3 ligase ITCH.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|O42099|MK08B_CYPCA Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 68/76 (89%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++V+VGD+ FT+LKRYQNL+PIGSGAQGIVC+AYD   ++NVAIKKLSRPFQN THAKR
Sbjct: 10 FYSVDVGDSTFTVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKR 69

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 70 AYRELVLMKCVNHKNI 85

Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, primarily components of AP-1 such as c-Jun and ATF2 and thus regulates AP-1 transcriptional activity.

Cyprinus carpio (taxid: 7962)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q90327|MK08A_CYPCA Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 68/76 (89%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++V+VGD+ FT+LKRYQNL+PIGSGAQGIVC+AYD   ++NVAIKKLSRPFQN THAKR
Sbjct: 10 FYSVDVGDSTFTVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKR 69

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 70 AYRELVLMKYVNHKNI 85

Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, primarily components of AP-1 such as c-Jun and ATF2 and thus regulates AP-1 transcriptional activity.

Cyprinus carpio (taxid: 7962)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q8QHK8|MK08_XENLA Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2

 Score =  128 bits (322), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 68/82 (82%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+  + F   E+GD+ FT+LKRYQNLKPIGSGAQGIVCAA+D   +++VAIKKLSRPFQN
Sbjct: 4  SKRDSNFSVFEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAFDAVLERHVAIKKLSRPFQN 63

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulating transcriptional activity (By similarity). Regulates morphogenic cell movements, controlling convergent extension during gastrulation.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
345480009	390	PREDICTED: stress-activated protein kina	0.978	0.235	0.858	1e-40
307177278	389	Stress-activated protein kinase JNK [Cam	0.968	0.233	0.858	3e-39
350401433	551	PREDICTED: stress-activated protein kina	0.968	0.165	0.847	4e-39
340729092	521	PREDICTED: stress-activated protein kina	0.968	0.174	0.847	4e-39
383865498	454	PREDICTED: stress-activated protein kina	0.968	0.200	0.847	5e-39
380030516	553	PREDICTED: stress-activated protein kina	0.968	0.164	0.847	6e-39
328775885	554	PREDICTED: stress-activated protein kina	0.968	0.164	0.847	7e-39
242007098	436	mitogen-activated protein kinase ERK-A,	0.872	0.188	0.926	7e-39
189240598	390	PREDICTED: similar to jnk [Tribolium cas	0.872	0.210	0.927	3e-37
118780573	375	AGAP009461-PA [Anopheles gambiae str. PE	0.808	0.202	0.960	8e-37

>gi|345480009|ref|XP_003424073.1| PREDICTED: stress-activated protein kinase JNK-like isoform 2 [Nasonia vitripennis] gi|345480011|ref|XP_001605523.2| PREDICTED: stress-activated protein kinase JNK-like isoform 1 [Nasonia vitripennis]

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 84/92 (91%)

Query: 1  MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
          MP +G     +RLSTMF+TVEVGDTKFTILKRY NLKPIGSGAQGIVCAA+DT TQQNVA
Sbjct: 1  MPYLGPDMSTTRLSTMFYTVEVGDTKFTILKRYTNLKPIGSGAQGIVCAAFDTVTQQNVA 60

Query: 61 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 61 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 92

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177278|gb|EFN66456.1| Stress-activated protein kinase JNK [Camponotus floridanus]

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1  MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
          MP +G     +RLS MF+TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 1  MPYLGPDM-TTRLSAMFYTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 59

Query: 61 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 60 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 91

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401433|ref|XP_003486150.1| PREDICTED: stress-activated protein kinase JNK-like [Bombus impatiens]

 Score =  165 bits (417), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1   MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
           MP +G     +RLS MF+TVEVGDT+FTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 163 MPYLGPDM-TTRLSAMFYTVEVGDTRFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 221

Query: 61  IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 222 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 253

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729092|ref|XP_003402842.1| PREDICTED: stress-activated protein kinase JNK [Bombus terrestris]

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1   MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
           MP +G     +RLS MF+TVEVGDT+FTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 133 MPYLGPDM-TTRLSAMFYTVEVGDTRFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 191

Query: 61  IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 192 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 223

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865498|ref|XP_003708210.1| PREDICTED: stress-activated protein kinase JNK-like [Megachile rotundata]

 Score =  164 bits (416), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1   MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
           MP +G     +RLS MF+TVEVGDT+FTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 66  MPYLGPDM-TTRLSAMFYTVEVGDTRFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 124

Query: 61  IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 125 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 156

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030516|ref|XP_003698892.1| PREDICTED: stress-activated protein kinase JNK-like [Apis florea]

 Score =  164 bits (415), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1   MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
           MP +G     +RLS MF+TVEVGDT+FTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 165 MPYLGPDM-TTRLSAMFYTVEVGDTRFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 223

Query: 61  IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 224 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 255

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328775885|ref|XP_392806.3| PREDICTED: stress-activated protein kinase JNK [Apis mellifera]

 Score =  164 bits (415), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 1/92 (1%)

Query: 1   MPLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVA 60
           MP +G     +RLS MF+TVEVGDT+FTILKRYQNLKPIGSGAQGIVCAAYDT T QNVA
Sbjct: 166 MPYLGPDM-TTRLSAMFYTVEVGDTRFTILKRYQNLKPIGSGAQGIVCAAYDTVTAQNVA 224

Query: 61  IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           IKKLSRPFQNVTHAKRAYREFKLMKLVNHKN+
Sbjct: 225 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI 256

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242007098|ref|XP_002424379.1| mitogen-activated protein kinase ERK-A, putative [Pediculus humanus corporis] gi|212507779|gb|EEB11641.1| mitogen-activated protein kinase ERK-A, putative [Pediculus humanus corporis]

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 76/82 (92%), Positives = 81/82 (98%)

Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           SR ++MF+TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTAT+QNVAIKKLSRPFQN
Sbjct: 43  SRGTSMFYTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATKQNVAIKKLSRPFQN 102

Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
           VTHAKRAYREFKLMKLVNHKN+
Sbjct: 103 VTHAKRAYREFKLMKLVNHKNI 124

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240598|ref|XP_974963.2| PREDICTED: similar to jnk [Tribolium castaneum] gi|270012825|gb|EFA09273.1| basket [Tribolium castaneum]

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/83 (92%), Positives = 79/83 (95%), Gaps = 1/83 (1%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MSRLS  F+TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAA DT TQQNVAIKKLSRPFQ
Sbjct: 1  MSRLS-QFYTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAVDTETQQNVAIKKLSRPFQ 59

Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          NVTHAKRAYREFKLMKLVNHKN+
Sbjct: 60 NVTHAKRAYREFKLMKLVNHKNI 82

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118780573|ref|XP_310236.3| AGAP009461-PA [Anopheles gambiae str. PEST] gi|116131141|gb|EAA05905.3| AGAP009461-PA [Anopheles gambiae str. PEST]

 Score =  157 bits (397), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 73/76 (96%), Positives = 75/76 (98%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDT TQQNVAIKKLSRPFQNVTHAKR
Sbjct: 7  FYTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTVTQQNVAIKKLSRPFQNVTHAKR 66

Query: 77 AYREFKLMKLVNHKNV 92
          AYREFKLMKLVNHKN+
Sbjct: 67 AYREFKLMKLVNHKNI 82

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
FB|FBgn0000229	372	bsk "basket" [Drosophila melan	0.882	0.223	0.819	9.8e-32
UNIPROTKB|A4FV00	426	MAPK10 "Uncharacterized protei	0.872	0.192	0.756	7.9e-30
UNIPROTKB|E2R9W9	359	MAPK10 "Uncharacterized protei	0.872	0.228	0.756	7.9e-30
UNIPROTKB|F1PMN2	464	MAPK10 "Uncharacterized protei	0.872	0.176	0.756	7.9e-30
UNIPROTKB|D6RAU3	141	MAPK10 "Mitogen-activated prot	0.872	0.581	0.756	7.9e-30
UNIPROTKB|P53779	464	MAPK10 "Mitogen-activated prot	0.872	0.176	0.756	7.9e-30
UNIPROTKB|F1RW16	464	MAPK10 "Uncharacterized protei	0.872	0.176	0.756	7.9e-30
UNIPROTKB|K7GP94	426	MAPK10 "Uncharacterized protei	0.872	0.192	0.756	7.9e-30
UNIPROTKB|K7GT04	379	MAPK10 "Uncharacterized protei	0.872	0.216	0.756	7.9e-30
MGI|MGI:1346863	464	Mapk10 "mitogen-activated prot	0.872	0.176	0.756	7.9e-30

FB|FBgn0000229 bsk "basket" [Drosophila melanogaster (taxid:7227)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/83 (81%), Positives = 72/83 (86%)

Query:    10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
             M+      +TVEVGDT FTI  RY NL+PIGSGAQGIVCAAYDT TQQNVAIKKLSRPFQ
Sbjct:     1 MTTAQHQHYTVEVGDTNFTIHSRYINLRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQ 60

Query:    70 NVTHAKRAYREFKLMKLVNHKNV 92
             NVTHAKRAYREFKLMKLVNHKN+
Sbjct:    61 NVTHAKRAYREFKLMKLVNHKNI 83

GO:0004705 "JUN kinase activity" evidence=ISS;IMP;NAS;IDA;TAS

GO:0007254 "JNK cascade" evidence=ISS;IDA;TAS

GO:0019731 "antibacterial humoral response" evidence=IDA

GO:0007391 "dorsal closure" evidence=NAS;IMP;TAS

GO:0048598 "embryonic morphogenesis" evidence=IDA

GO:0004707 "MAP kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=NAS;TAS

GO:0005634 "nucleus" evidence=ISS

GO:0000165 "MAPK cascade" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0006952 "defense response" evidence=NAS

GO:0007258 "JUN phosphorylation" evidence=IMP

GO:0046843 "dorsal appendage formation" evidence=IMP

GO:0046844 "micropyle formation" evidence=IMP

GO:0042060 "wound healing" evidence=IMP;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016055 "Wnt receptor signaling pathway" evidence=NAS

GO:0001736 "establishment of planar polarity" evidence=NAS

GO:0046529 "imaginal disc fusion, thorax closure" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0035313 "wound healing, spreading of epidermal cells" evidence=IMP

GO:0043508 "negative regulation of JUN kinase activity" evidence=IMP

GO:0034614 "cellular response to reactive oxygen species" evidence=IDA

GO:0071243 "cellular response to arsenic-containing substance" evidence=IDA

GO:0071276 "cellular response to cadmium ion" evidence=IDA

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

GO:0035006 "melanization defense response" evidence=IMP

GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IGI

GO:0048615 "embryonic anterior midgut (ectodermal) morphogenesis" evidence=IGI

GO:0007298 "border follicle cell migration" evidence=IGI

GO:0009408 "response to heat" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0030425 "dendrite" evidence=IDA

GO:0048666 "neuron development" evidence=IMP

GO:0030424 "axon" evidence=IDA

GO:0007411 "axon guidance" evidence=IMP

GO:0048674 "collateral sprouting of injured axon" evidence=IMP

GO:0048803 "imaginal disc-derived male genitalia morphogenesis" evidence=IMP

UNIPROTKB|A4FV00 MAPK10 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:     4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:    64 QTHAKRAYRELVLMKCVNHKNI 85

GO:0005886 "plasma membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

UNIPROTKB|E2R9W9 MAPK10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:     4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:    64 QTHAKRAYRELVLMKCVNHKNI 85

GO:0005886 "plasma membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

UNIPROTKB|F1PMN2 MAPK10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:    42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:   102 QTHAKRAYRELVLMKCVNHKNI 123

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

UNIPROTKB|D6RAU3 MAPK10 "Mitogen-activated protein kinase 10" [Homo sapiens (taxid:9606)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:    42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:   102 QTHAKRAYRELVLMKCVNHKNI 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|P53779 MAPK10 "Mitogen-activated protein kinase 10" [Homo sapiens (taxid:9606)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:    42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:   102 QTHAKRAYRELVLMKCVNHKNI 123

GO:0005524 "ATP binding" evidence=IEA

GO:0004705 "JUN kinase activity" evidence=ISS

GO:0007254 "JNK cascade" evidence=ISS;TAS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0004708 "MAP kinase kinase activity" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0051090 "regulation of sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0007258 "JUN phosphorylation" evidence=ISS;TAS

UNIPROTKB|F1RW16 MAPK10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:    42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:   102 QTHAKRAYRELVLMKCVNHKNI 123

GO:0005886 "plasma membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

UNIPROTKB|K7GP94 MAPK10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:     4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:    64 QTHAKRAYRELVLMKCVNHKNI 85

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

UNIPROTKB|K7GT04 MAPK10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:     4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:    64 QTHAKRAYRELVLMKCVNHKNI 85

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

MGI|MGI:1346863 Mapk10 "mitogen-activated protein kinase 10" [Mus musculus (taxid:10090)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query:    11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct:    42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101

Query:    71 VTHAKRAYREFKLMKLVNHKNV 92
              THAKRAYRE  LMK VNHKN+
Sbjct:   102 QTHAKRAYRELVLMKCVNHKNI 123

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004705 "JUN kinase activity" evidence=ISO;IDA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0007254 "JNK cascade" evidence=ISO;IDA

GO:0007258 "JUN phosphorylation" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0023014 "signal transduction by phosphorylation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2QN07	MPKC_ASPNC	2, ., 7, ., 1, 1, ., 2, 4	0.5441	0.7234	0.1717	yes	N/A
P49187	MK10_RAT	2, ., 7, ., 1, 1, ., 2, 4	0.7560	0.8723	0.1767	yes	N/A
Q61831	MK10_MOUSE	2, ., 7, ., 1, 1, ., 2, 4	0.7560	0.8723	0.1767	yes	N/A
P53779	MK10_HUMAN	2, ., 7, ., 1, 1, ., 2, 4	0.7560	0.8723	0.1767	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	94
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	7e-55
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-40
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-39
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-37
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-32
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-30
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-27
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-26
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-23
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-23
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-23
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-22
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-20
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-18
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	6e-18
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-15
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-14
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-14
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-09
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-09
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	8e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	9e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	0.002
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.002
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.002
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.002
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.004

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  172 bits (439), Expect = 7e-55
 Identities = 66/77 (85%), Positives = 71/77 (92%)

Query: 16 MFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAK 75
           F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYDT T QNVAIKKLSRPFQNVTHAK
Sbjct: 1  QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAK 60

Query: 76 RAYREFKLMKLVNHKNV 92
          RAYRE  LMKLVNHKN+
Sbjct: 61 RAYRELVLMKLVNHKNI 77

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score =  134 bits (339), Expect = 5e-40
 Identities = 61/82 (74%), Positives = 70/82 (85%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score =  133 bits (336), Expect = 1e-39
 Identities = 61/76 (80%), Positives = 67/76 (88%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN THAKR
Sbjct: 3  FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 63 AYRELVLMKCVNHKNI 78

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score =  128 bits (322), Expect = 2e-37
 Identities = 57/82 (69%), Positives = 67/82 (81%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S   + F++V+V D+ FT+LKRYQ LKPIGSGAQGIVCAA+DT    NVA+KKLSRPFQN
Sbjct: 1  SEEDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN 60

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  L+K VNHKN+
Sbjct: 61 QTHAKRAYRELVLLKCVNHKNI 82

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  113 bits (284), Expect = 7e-32
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + +  RYQNL P+GSGA G VC+A+DT T + VAIKKLSRPFQ+  HAKR
Sbjct: 1  FYRQELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKR 60

Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K ++H+NV
Sbjct: 61 TYRELRLLKHMDHENV 76

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  108 bits (271), Expect = 6e-30
 Identities = 32/61 (52%), Positives = 44/61 (72%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY+ LKPIGSGA G+VC+A D  T + VAIKK+S  F ++  AKR  RE KL++ + H+N
Sbjct: 1  RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHEN 60

Query: 92 V 92
          +
Sbjct: 61 I 61

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  100 bits (251), Expect = 4e-27
 Identities = 42/76 (55%), Positives = 58/76 (76%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VC+AYDT  +Q VA+KKLSRPFQ++ HA+R
Sbjct: 1  FYRQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARR 60

Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 61 TYRELRLLKHMKHENV 76

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 97.8 bits (243), Expect = 5e-26
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 3  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 62

Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 63 TYRELRLLKHMKHENV 78

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 91.5 bits (227), Expect = 1e-23
 Identities = 41/77 (53%), Positives = 53/77 (68%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  EV  T + + +RY +LK +GSGA G VC+A D  T + VAIKKLSRPFQ+   AKR
Sbjct: 1  FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKR 60

Query: 77 AYREFKLMKLVNHKNVS 93
          AYRE  L+K + H+NV 
Sbjct: 61 AYRELTLLKHMQHENVI 77

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 89.7 bits (223), Expect = 3e-23
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          YQ L  IG G  G+V  A D  T + VAIKK+   F++    K A RE KL+K +NH N+
Sbjct: 1  YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 90.4 bits (224), Expect = 3e-23
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          ++  EV  T + +  RY++LK +GSGA G VC+A D  T   VAIKKL RPFQ+   AKR
Sbjct: 1  YYRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKR 60

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE +L+K + H+NV
Sbjct: 61 AYRELRLLKHMKHENV 76

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 87.2 bits (216), Expect = 4e-22
 Identities = 36/68 (52%), Positives = 47/68 (69%)

Query: 25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          T F I  RY +L+P+G GA G+VC+A D  T QNVAIKK+ +PF     AKR YRE KL+
Sbjct: 4  TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLL 63

Query: 85 KLVNHKNV 92
          K + H+N+
Sbjct: 64 KHLRHENI 71

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 80.9 bits (200), Expect = 8e-20
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  +Y  +KPIG GA GIVC+A ++ T + VAIKK++  F N   AKR  RE KL++ 
Sbjct: 1  FEVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH 60

Query: 87 VNHKNV 92
          ++H+NV
Sbjct: 61 LDHENV 66

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 75.8 bits (187), Expect = 5e-18
 Identities = 28/61 (45%), Positives = 40/61 (65%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY+ ++ IGSGA G+VC+A DT + + VAIKK+   F   T AKR  RE K+++   H N
Sbjct: 6  RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDN 65

Query: 92 V 92
          +
Sbjct: 66 I 66

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 6e-18
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RYQNL  IG GA G+VC+A    T   VAIKK+S PF++ T  +R  RE K+++ 
Sbjct: 1  FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKIS-PFEHQTFCQRTLREIKILRR 59

Query: 87 VNHKNV 92
            H+N+
Sbjct: 60 FKHENI 65

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 3/66 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYRE--FKLMKL 86
          IL++Y+ L+ +G GA GIV  A D  T++ VA+KK+   F+N T A+R +RE  F L +L
Sbjct: 5  ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMF-LQEL 63

Query: 87 VNHKNV 92
           +H N+
Sbjct: 64 GDHPNI 69

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 66.7 bits (163), Expect = 1e-14
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY+  + IG G+ G+VC+A DT T + VAIKK++  F++V+ A R  RE KL++L+ H +
Sbjct: 1  RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 92 V 92
          +
Sbjct: 61 I 61

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQN--VAIKKLSRPFQNVTHAKRAYREFKLMK-LVN 88
          RY+ +K +G GA GIVC+A +  T +   VAIKK++  F     AKRA RE KL++    
Sbjct: 1  RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60

Query: 89 HKNV 92
          HKN+
Sbjct: 61 HKNI 64

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ L+ +G G+ G V  A D  T + VAIK + +        +R  RE K++K + H N+
Sbjct: 1  YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIK-KDRERILREIKILKKLKHPNI 59

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +PIG GA G+V +  D    + VA+KK+   FQN+   KR +RE K++    H NV
Sbjct: 6  RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 61

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ L+ +GSG+ G V  A    T + VA+K L +  +     + A RE ++++ ++H N+
Sbjct: 1  YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Length = 260

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 53.4 bits (129), Expect = 7e-10
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+NL+ IG GA G V  A D AT + VAIKK+    QN    +    E  +MK   H N+
Sbjct: 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNK---ELIINEILIMKDCKHPNI 77

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          ++ L+ IG G  G V  A    T + VAIK +    ++    ++   E +++K   H N+
Sbjct: 2  FEILEKIGKGGFGEVYKARHKRTGKEVAIKVI--KLESKEKKEKIINEIQILKKCKHPNI 59

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +G G  G V  A D  T + VAIK + +   + +  +   RE +++K +NH N+
Sbjct: 1  LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS-SLLEELLREIEILKKLNHPNI 53

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 50.5 bits (121), Expect = 8e-09
 Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY +L+P+G G+ G+V +A D+   + VA+KK+     +    K A RE K+++ 
Sbjct: 1  FDLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIV--LTDPQSVKHALREIKIIRR 58

Query: 87 VNHKNV 92
          ++H N+
Sbjct: 59 LDHDNI 64

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY+ L  IG GA GIV  A D  T + VA+KK++          +A RE K ++   H  
Sbjct: 1  RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 92 V 92
          V
Sbjct: 61 V 61

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK-LMKLVNHKN 91
          Y+ +K +G G  G V  A +  T + VAIKK+ + F +        RE K L KL  H N
Sbjct: 1  YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNEHPN 59

Query: 92 V 92
          +
Sbjct: 60 I 60

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.9 bits (107), Expect = 6e-07
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL---SRPFQNVTHAKRAYREFKLMKLVN 88
          RY+  K +G G   +V  A D  T + VAIKK+    R          A RE KL++ + 
Sbjct: 1  RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 89 HKNV 92
          H N+
Sbjct: 61 HPNI 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +Y+ L  +G GA G+V    + AT + VAIKK      +    K A RE K+++ + H+N
Sbjct: 2  KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN 61

Query: 92 V 92
          +
Sbjct: 62 I 62

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           +   + +G G+ G V  A D  T + +A+K +     +    +   RE +++  + H N
Sbjct: 1  EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 92 V 92
          +
Sbjct: 61 I 61

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 25 TKFTILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLS-RPFQNVTHAKRAY---- 78
            F+I +RY      +G G  G V  AYDT T + VAIKK+      N     R      
Sbjct: 2  MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMC 61

Query: 79 -------REFKLMKLVNHKNV 92
                 RE K+M  + H+N+
Sbjct: 62 GIHFTTLRELKIMNEIKHENI 82

Length = 335

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 15/61 (24%), Positives = 30/61 (49%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +Y+ +K IG G+ G V      +  +   +K++     +    + A  E K++K +NH N
Sbjct: 1  KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 92 V 92
          +
Sbjct: 61 I 61

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 42.8 bits (99), Expect = 5e-06
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-VTHAKRAYREFKLMKLVNHKN 91
          Y+ L+ +G G+ G V  A D    + VA+K L++  ++     +R  RE +++  +NH  
Sbjct: 2  YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Length = 384

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          + +L T+   V VGD K    K+Y   + IG GA G V  A D AT Q VAIK+++   Q
Sbjct: 5  LEKLRTI---VSVGDPK----KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMN--LQ 55

Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
               +    E  +M+   H N+
Sbjct: 56 QQPKKELIINEILVMRENKHPNI 78

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVN 88
          Y+ L+ +G G  G+V  A D  T + VA+KK+    +      T    A RE  L+K + 
Sbjct: 1  YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPST----ALREISLLKELK 56

Query: 89 HKNV 92
          H N+
Sbjct: 57 HPNI 60

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 42.1 bits (99), Expect = 7e-06
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNH 89
          K + +L+ IG G+ G V  A D  T + VAIKK+S    Q+    +   +E + ++ + H
Sbjct: 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH 74

Query: 90 KN 91
           N
Sbjct: 75 PN 76

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 36 LKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           K +G GA G V            +  VA+K L     +    +   RE ++M+ ++H N
Sbjct: 4  GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKED-ASEQQIEEFLREARIMRKLDHPN 62

Query: 92 V 92
          V
Sbjct: 63 V 63

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKK--LSRPFQNVTHAKRAYREFKLMKLVN 88
            Y+ ++ IG GA  +V AA      + VAIK+  L +   +V   +   +E + M   N
Sbjct: 1  DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELR---KEVQAMSQCN 57

Query: 89 HKNVSH 94
          H NV  
Sbjct: 58 HPNVVK 63

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 36 LKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           K +G GA G V            +  VA+K L     +    +   RE ++M+ ++H N
Sbjct: 4  GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKED-ASEQQIEEFLREARIMRKLDHPN 62

Query: 92 V 92
          +
Sbjct: 63 I 63

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-----VTHAKRAYREFKLMKLV 87
          Y+ +  IG G  G V  A +  T + VA+KK+ R         +T    A RE KL++ +
Sbjct: 1  YEKIAQIGEGTYGQVYKARNKKTGELVALKKI-RMENEKEGFPIT----AIREIKLLQKL 55

Query: 88 NHKNV 92
           H N+
Sbjct: 56 RHPNI 60

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          YQ ++ IG G  G+V  A D  T + VA+KK+    ++      A RE  L+K +NH N+
Sbjct: 1  YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI 60

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRA---YREFKLMKLVN 88
             N   IG G+ GIVC A D +T + VA+KK+     ++   +R    + E  +M+   
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKM-----DLRKQQRRELLFNEVVIMRDYQ 74

Query: 89 HKNV 92
          H N+
Sbjct: 75 HPNI 78

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAIK+++
Sbjct: 5  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMN 53

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR-----AYREFKLM 84
          L+ Y+ L  +G G  G V  A    T + VA+KK+      + + K      A RE K++
Sbjct: 7  LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKIL-----MHNEKDGFPITALREIKIL 61

Query: 85 KLVNHKNV 92
          K + H NV
Sbjct: 62 KKLKHPNV 69

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH N+
Sbjct: 2  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.7 bits (92), Expect = 5e-05
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 6  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 54

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +Y+ L  IG G+ G+V    +  T Q VAIKK      +    K A RE +++K + H N
Sbjct: 2  KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPN 61

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +Y+NL  +G G+ G+V       T Q VAIKK      +    K A RE +++K + H+N
Sbjct: 2  KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHEN 61

Query: 92 V 92
          +
Sbjct: 62 L 62

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.0 bits (91), Expect = 8e-05
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ ++ IG G  G+V  A D  T + +A+KK+    ++      A RE  L+K + H
Sbjct: 1  MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 90 KNV 92
           N+
Sbjct: 61 GNI 63

Length = 294

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 22/66 (33%), Positives = 35/66 (53%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           + +Y+ L  IG G  G V  A    T+Q VA+KK+    +       A RE K+++L+ 
Sbjct: 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK 69

Query: 89 HKNVSH 94
          H+NV +
Sbjct: 70 HENVVN 75

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 38.6 bits (89), Expect = 1e-04
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          M +L T+   V +GD K    K+Y   + IG GA G V  A D AT Q VAIK+++   Q
Sbjct: 5  MEKLRTI---VSIGDPK----KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQIN--LQ 55

Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
               +    E  +MK + + N+
Sbjct: 56 KQPKKELIINEILVMKELKNPNI 78

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 9/63 (14%)

Query: 36 LKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRA--YREFKLMKLVNH 89
           K +G GA G V           T+  VA+K L    +  +  +R     E  +MK ++H
Sbjct: 4  GKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLK---EGASEEEREEFLEEASIMKKLSH 60

Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSR---PFQNVTHAKRAYREFKLMKLVNHKNV 92
          IG GA G+V    +  T   VAIK++S      + +   K   +E  L+K + H N+
Sbjct: 8  IGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL---KSIMQEIDLLKNLKHPNI 61

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHA--KRAYREFKLMKLVNH 89
          R+Q    IG G  G V  A +  T + +A+K++    Q+      K    E K+++L+ H
Sbjct: 1  RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEI--RIQDNDPKTIKEIADEMKVLELLKH 58

Query: 90 KNV 92
           N+
Sbjct: 59 PNL 61

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 37 KPIGSGAQGIVC-AAYDTATQQ--NVAIKKLSRPFQNVTHAKRA--YREFKLMKLVNHKN 91
          K +G GA G V          +   VA+K L    ++ +  +R    +E ++MK + H N
Sbjct: 1  KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLK---EDASEEERKDFLKEARVMKKLGHPN 57

Query: 92 V 92
          V
Sbjct: 58 V 58

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 35.9 bits (83), Expect = 9e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +Y+ L+ IG G  G V  A +  T + VA+K++     +      A RE  L+K + HKN
Sbjct: 1  KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 92 V 92
          +
Sbjct: 61 I 61

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +G G  GIV AA D +TQ  +AIK++  P ++  + +  + E  L   + H+N+
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEI--PERDSRYVQPLHEEIALHSYLKHRNI 67

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR--AYREFKLMKLVNH 89
          +Y+ ++ +G GA GIV      A Q+ V IK++  P + +T  +R  A  E +++KL++H
Sbjct: 1  KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQI--PVEQMTKDERLAAQNECQVLKLLSH 58

Query: 90 KNV 92
           N+
Sbjct: 59 PNI 61

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y  ++ IG G  G+V    +  T Q VA+KK+    +       A RE  L+K + H N+
Sbjct: 2  YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHA-KRAYREFKLMKLVNH 89
          K + +L+ IG G+ G V  A D  T + VAIKK+S   +      +   +E K ++ + H
Sbjct: 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH 84

Query: 90 KN 91
           N
Sbjct: 85 PN 86

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NH 89
          Y+ L  IG GA G V  A D  T + VA+KK+  P           RE  L+K +    H
Sbjct: 1  YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60

Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL----SRPFQNVTHAKRAYREFKLMK 85
          +  ++ L  IG G  GIV  A DT + + VA+KK+     R    ++    + RE  L+ 
Sbjct: 6  VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPIS----SLREITLLL 61

Query: 86 LVNHKNV 92
           + H N+
Sbjct: 62 NLRHPNI 68

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
KOG0595|consensus	429		99.34
KOG0591|consensus	375		99.23
KOG0597|consensus	808		99.21
KOG0593|consensus	396		99.21
KOG0600|consensus	560		99.2
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.19
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.18
KOG0575|consensus	592		99.15
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.15
KOG0598|consensus	357		99.14
KOG0659|consensus	318		99.13
KOG0660|consensus	359		99.11
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.1
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.09
KOG0615|consensus	475		99.09
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.08
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.06
KOG1035|consensus	1351		99.05
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.04
KOG4236|consensus	888		99.03
KOG0663|consensus	419		99.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.99
KOG0194|consensus	474		98.99
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.98
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.98
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.98
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.98
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.96
KOG0605|consensus	550		98.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.94
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.93
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.92
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.92
KOG1187|consensus	361		98.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.92
KOG4250|consensus	732		98.91
KOG0586|consensus	596		98.9
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.89
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.88
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.88
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.87
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.86
KOG0658|consensus	364		98.86
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.85
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.85
KOG0580|consensus	281		98.85
PRK09188	365	serine/threonine protein kinase; Provisional	98.85
KOG0585|consensus	576		98.85
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.84
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.84
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.84
KOG0032|consensus	382		98.84
KOG0192|consensus	362		98.83
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.83
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.83
PTZ00283	496	serine/threonine protein kinase; Provisional	98.82
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.82
PHA03212	391	serine/threonine kinase US3; Provisional	98.82
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.81
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.81
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.81
KOG0611|consensus	668		98.81
KOG0582|consensus	516		98.81
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.81
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.81
KOG1095|consensus	1025		98.8
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.8
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.8
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.79
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.79
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.79
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.78
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.78
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.78
KOG0661|consensus	538		98.78
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.78
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.78
PTZ00036	440	glycogen synthase kinase; Provisional	98.78
PLN00009	294	cyclin-dependent kinase A; Provisional	98.78
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.77
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.77
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.76
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.76
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.76
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.76
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.76
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.76
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.75
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.75
KOG0616|consensus	355		98.75
KOG0589|consensus	426		98.74
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.74
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.74
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.74
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.74
KOG0196|consensus	996		98.74
KOG0199|consensus	1039		98.74
KOG0662|consensus	292		98.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.73
KOG0694|consensus	694		98.73
KOG0581|consensus	364		98.73
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.73
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.73
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.73
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.73
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.72
KOG0193|consensus	678		98.72
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.72
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.71
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.71
KOG1026|consensus	774		98.71
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.71
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.71
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.7
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.7
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.7
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.7
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.7
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.7
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.7
KOG0583|consensus	370		98.7
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.7
KOG1094|consensus	807		98.7
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.7
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.7
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.69
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.69
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.69
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.69
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.68
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.68
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.68
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.68
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.68
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.67
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.67
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.67
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.66
KOG0197|consensus	468		98.66
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.66
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.66
KOG0033|consensus	355		98.66
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.66
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.66
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.66
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.66
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.66
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.65
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.65
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.65
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.64
KOG0198|consensus	313		98.64
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.64
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.64
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.64
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.64
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.63
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.63
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.63
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.63
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.63
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.63
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.63
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.62
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.62
KOG2345|consensus	302		98.62
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.62
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.62
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.61
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.61
KOG0201|consensus	467		98.61
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.61
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.61
KOG1989|consensus	738		98.6
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.59
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.59
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.59
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.59
KOG0610|consensus	459		98.59
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.59
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.59
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.59
PTZ00284	467	protein kinase; Provisional	98.58
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.58
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.58
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.58
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.58
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.57
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.57
KOG0668|consensus	338		98.57
KOG4717|consensus	864		98.57
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.56
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.56
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.56
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.56
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.55
PHA03211	461	serine/threonine kinase US3; Provisional	98.55
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.55
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.55
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.55
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.55
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.53
KOG0667|consensus	586		98.53
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.53
KOG1290|consensus	590		98.53
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.53
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.52
KOG0594|consensus	323		98.52
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.51
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.51
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.51
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.51
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.51
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.5
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.5
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.5
PTZ00267	478	NIMA-related protein kinase; Provisional	98.5
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.5
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.5
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.5
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.5
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.5
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.5
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.5
PHA03209	357	serine/threonine kinase US3; Provisional	98.49
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.49
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.48
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.47
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.47
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.47
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.47
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.46
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.46
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.46
PHA03210	501	serine/threonine kinase US3; Provisional	98.46
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.45
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.45
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.45
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.45
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.44
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.44
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.44
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.44
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.44
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.44
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.44
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.44
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.44
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.44
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.43
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.43
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.43
KOG0577|consensus	948		98.43
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.43
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.43
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.42
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.41
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.41
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.41
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.41
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.41
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.41
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.4
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.4
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.4
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.4
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.4
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.4
KOG2052|consensus	513		98.4
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.4
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.39
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.38
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.38
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.38
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.37
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.37
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.37
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.36
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.36
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.36
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.36
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.35
KOG4278|consensus	1157		98.35
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.35
KOG1151|consensus	775		98.35
KOG0690|consensus	516		98.35
PHA03207	392	serine/threonine kinase US3; Provisional	98.35
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.34
KOG0588|consensus	786		98.34
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.33
KOG0574|consensus	502		98.33
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.32
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.32
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.32
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.32
KOG1025|consensus	1177		98.32
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.31
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.31
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.31
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.31
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.3
KOG0666|consensus	438		98.3
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.29
KOG4279|consensus	1226		98.29
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.29
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.29
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.29
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.27
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.27
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.27
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.26
KOG0592|consensus	604		98.26
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.25
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.25
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.25
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.25
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.24
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.23
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.23
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.23
PHA02988	283	hypothetical protein; Provisional	98.23
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.23
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.22
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.22
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.22
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.21
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.21
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.21
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.21
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.21
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.2
KOG1152|consensus	772		98.19
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.19
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.19
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.17
KOG0584|consensus	632		98.16
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.16
KOG4257|consensus	974		98.15
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.15
KOG0579|consensus	1187		98.14
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.14
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.14
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.14
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.09
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.08
KOG3653|consensus	534		98.04
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.04
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.03
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.02
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.01
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.01
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.0
KOG0578|consensus	550		97.98
KOG0671|consensus	415		97.91
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.91
KOG0983|consensus	391		97.85
KOG0612|consensus	1317		97.82
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.8
PHA02882	294	putative serine/threonine kinase; Provisional	97.78
PRK10345	210	hypothetical protein; Provisional	97.77
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.76
KOG0670|consensus	752		97.74
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.74
KOG0695|consensus	593		97.7
KOG0576|consensus	829		97.69
KOG0587|consensus	953		97.68
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.66
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	97.66
KOG1163|consensus	341		97.64
KOG0608|consensus	1034		97.63
KOG0604|consensus	400		97.62
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.61
KOG0607|consensus	463		97.59
KOG0986|consensus	591		97.57
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.54
KOG1006|consensus	361		97.52
KOG0200|consensus	609		97.52
KOG0984|consensus	282		97.51
KOG4645|consensus	1509		97.5
KOG0664|consensus	449		97.46
KOG0669|consensus	376		97.44
KOG1345|consensus	378		97.42
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.41
smart00090	237	RIO RIO-like kinase.	97.28
KOG0596|consensus	677		97.25
KOG0599|consensus	411		97.21
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.21
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.18
KOG4721|consensus	904		97.08
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.01
PRK14879	211	serine/threonine protein kinase; Provisional	96.96
KOG1165|consensus	449		96.9
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.88
KOG0696|consensus	683		96.88
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	96.75
KOG0665|consensus	369		96.63
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.58
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.53
KOG1164|consensus	322		96.47
KOG0614|consensus	732		96.31
KOG1167|consensus	418		96.31
KOG1027|consensus	903		96.18
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.08
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	95.96
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.8
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	95.6
PRK12274	218	serine/threonine protein kinase; Provisional	95.57
KOG0603|consensus	612		95.07
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.05
KOG1166|consensus	974		94.37
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.19
KOG1024|consensus	563		92.69
KOG1033|consensus	516		92.51
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	91.96
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	91.74
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	90.45
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	90.29
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	87.18
COG0661	517	AarF Predicted unusual protein kinase [General fun	85.2
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	84.66
KOG0195|consensus	448		83.86
KOG0606|consensus	1205		80.88

>KOG0595|consensus

Probab=99.34  E-value=5.3e-12  Score=75.88  Aligned_cols=66  Identities=24%  Similarity=0.364  Sum_probs=59.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...+|...+.||.|+|+.||+|.++..+..+|+|.+.+........+-+..|+.+|+.++|+|||.
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~   73 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVR   73 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceee
Confidence            356789998999999999999999888999999999976557778888999999999999999983

>KOG0591|consensus

Probab=99.23  E-value=1.7e-12  Score=75.38  Aligned_cols=66  Identities=30%  Similarity=0.397  Sum_probs=58.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|++.++||+|+||.||++....++..++.|.++....+....+....|+.+|++|+|||||+
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVq   82 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQ   82 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHH
Confidence            356799999999999999999998889999999988865567788999999999999999999973

>KOG0597|consensus

Probab=99.21  E-value=1.7e-11  Score=76.90  Aligned_cols=64  Identities=27%  Similarity=0.370  Sum_probs=57.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|+.+.+...+|+|.+.+......+...+.+|+++++.+.|||||+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~   65 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVE   65 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhh
Confidence            4688889999999999999998888999999999976667778899999999999999999974

>KOG0593|consensus

Probab=99.21  E-value=2.7e-11  Score=71.07  Aligned_cols=64  Identities=31%  Similarity=0.508  Sum_probs=54.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|..+..+|+|++|.||+|+++.+|..||+|.+--...+....+-.++|+.+|.++.|+|+|.
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVn   65 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVN   65 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHH
Confidence            4577888999999999999999999999999987643334556677899999999999999973

>KOG0600|consensus

Probab=99.20  E-value=9.1e-12  Score=76.67  Aligned_cols=65  Identities=28%  Similarity=0.412  Sum_probs=56.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|..++.||+|.||.||++.+..++..||+|.+..............+||.+|++++||||++
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIik  180 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIK  180 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccc
Confidence            35678889999999999999999999999999998864444566778899999999999999984

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.19  E-value=2.6e-10  Score=68.56  Aligned_cols=78  Identities=72%  Similarity=1.076  Sum_probs=62.4

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++........+.+.++|.+.+.||+|+||.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   84 (359)
T cd07876           7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIIS   84 (359)
T ss_pred             cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEee
Confidence            444455555556778999999999999999999998888889999988753334455667889999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.18  E-value=2.7e-10  Score=68.35  Aligned_cols=78  Identities=78%  Similarity=1.160  Sum_probs=63.5

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +++....+..+.+.++|++.+.||+|+||.||.+.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus         3 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   80 (355)
T cd07874           3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS   80 (355)
T ss_pred             ceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhc
Confidence            455566666667788999999999999999999998778888999988754334455677889999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0575|consensus

Probab=99.15  E-value=1.7e-10  Score=72.22  Aligned_cols=64  Identities=22%  Similarity=0.384  Sum_probs=56.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|...++||+|+|..+|.+.+..++..+|+|.+.+. .......+.+.+|+++++.|.|||||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~   82 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQ   82 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEe
Confidence            4699999999999999999999889999999999864 335567889999999999999999984

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.15  E-value=8.8e-10  Score=66.42  Aligned_cols=81  Identities=74%  Similarity=1.105  Sum_probs=65.2

Q ss_pred             CcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          14 STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...++........+...++|.+.+.||+|+||.||.+.+...+..+++|.+............+.+|+.++..++|+||+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii   86 (364)
T cd07875           7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII   86 (364)
T ss_pred             cccceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCcc
Confidence            34556666666667778899999999999999999999877888899998875333445567788999999999999987


Q ss_pred             C
Q psy3070          94 H   94 (94)
Q Consensus        94 ~   94 (94)
                      +
T Consensus        87 ~   87 (364)
T cd07875          87 G   87 (364)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0598|consensus

Probab=99.14  E-value=1e-10  Score=69.48  Aligned_cols=66  Identities=20%  Similarity=0.233  Sum_probs=58.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      -.++|+++++||+|+||+|+.++...++..+|+|.+++.. ....+......|..+|.++.||+||+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~   89 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVK   89 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEee
Confidence            3678999999999999999999998999999999999753 34467888999999999999999984

>KOG0659|consensus

Probab=99.13  E-value=8.2e-11  Score=67.86  Aligned_cols=64  Identities=36%  Similarity=0.528  Sum_probs=54.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|...+.+|+|.||.||++.+..++..+|+|.+..........-...+|+..|..++|+||+.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~   65 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIE   65 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhh
Confidence            3577788999999999999999999999999998864333344567899999999999999973

>KOG0660|consensus

Probab=99.11  E-value=4.8e-10  Score=66.62  Aligned_cols=77  Identities=43%  Similarity=0.692  Sum_probs=67.7

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +.......+.|.....|...+.||.|++|.|..+.+..++..+|+|.+.......-..++..+|+.+|+.++|+||+
T Consensus         8 ~~~~~~~~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi   84 (359)
T KOG0660|consen    8 YYDYEVFGELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENII   84 (359)
T ss_pred             ceEEEeeeeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcc
Confidence            55667777888888889989999999999999999999999999998885555667888999999999999999997

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.10  E-value=6.5e-10  Score=66.57  Aligned_cols=73  Identities=52%  Similarity=0.801  Sum_probs=59.8

Q ss_pred             ecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        22 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .....|.+.++|++.+.||.|.+|.||.+.....+..+++|.+............+..|+.++..++|+||++
T Consensus         6 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   78 (343)
T cd07880           6 VNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIG   78 (343)
T ss_pred             hhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccc
Confidence            3456677888999999999999999999998788889999987643333445567889999999999999874

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.09  E-value=1.7e-10  Score=68.93  Aligned_cols=71  Identities=56%  Similarity=0.950  Sum_probs=57.9

Q ss_pred             CeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          24 DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        24 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +..|++.++|.+.+.||.|+||.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   78 (343)
T cd07878           8 KTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIG   78 (343)
T ss_pred             HHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhh
Confidence            45567788999999999999999999998778889999988743223344566788999999999999873

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0615|consensus

Probab=99.09  E-value=3.1e-10  Score=68.76  Aligned_cols=68  Identities=28%  Similarity=0.407  Sum_probs=55.2

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH-----HHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV-----THAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.+.|.+.+.||+|+||.|.++....++..+|+|++.+.....     .......+|+++|.+++||+||+
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~  240 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVR  240 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEE
Confidence            345677899999999999999999998999999999998642211     12334679999999999999974

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.08  E-value=1.7e-09  Score=64.97  Aligned_cols=78  Identities=85%  Similarity=1.220  Sum_probs=62.8

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +++...++..+....+|+..+.||+|++|.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   79 (353)
T cd07850           2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIG   79 (353)
T ss_pred             ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcc
Confidence            345555666667788999999999999999999998888889999988643334445567788999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.06  E-value=1e-09  Score=65.83  Aligned_cols=74  Identities=57%  Similarity=0.923  Sum_probs=59.2

Q ss_pred             eecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          21 EVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.....+.+.++|.+.+.||+|.||.||.+.....+..+++|.+............+.+|+.++.+++|+||++
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~   80 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG   80 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccc
Confidence            34445577788999999999999999999988778889999988743223334566788999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG1035|consensus

Probab=99.05  E-value=1.2e-10  Score=77.65  Aligned_cols=64  Identities=28%  Similarity=0.403  Sum_probs=55.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.....||+|+||.||+++.+-+|..+|+|.|.... .......+.+|+.++++|+|||||.
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVR  541 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVR  541 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceee
Confidence            456778899999999999999999999999999988543 4566778899999999999999984

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.04  E-value=2.2e-09  Score=63.85  Aligned_cols=63  Identities=43%  Similarity=0.747  Sum_probs=51.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.||.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   63 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVE   63 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEee
Confidence            488899999999999999998888889999987743223334567889999999999999873

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG4236|consensus

Probab=99.03  E-value=2.9e-10  Score=71.32  Aligned_cols=66  Identities=21%  Similarity=0.327  Sum_probs=54.7

Q ss_pred             eecceEEe--eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNL--KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~--~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +..-|++.  ++||+|.||.||-|.++.+|..+++|.+.+..........+.+|+++|..++||.||.
T Consensus       560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~  627 (888)
T KOG4236|consen  560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVN  627 (888)
T ss_pred             HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeE
Confidence            33445544  8999999999999999999999999999975444445578899999999999999973

>KOG0663|consensus

Probab=99.00  E-value=2.3e-10  Score=67.97  Aligned_cols=65  Identities=25%  Similarity=0.401  Sum_probs=53.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|+.+..|++|.||.||++++..++..||+|.+..........=..++|+.+|.+++|+|||.
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~  139 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVE  139 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeee
Confidence            34678889999999999999999999999999998854322233345689999999999999984

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.00  E-value=4.1e-09  Score=63.76  Aligned_cols=63  Identities=37%  Similarity=0.599  Sum_probs=52.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||.|+||.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   63 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLS   63 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCC
Confidence            367789999999999999998778889999987643233445677889999999999999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.99  E-value=4.1e-09  Score=61.45  Aligned_cols=63  Identities=27%  Similarity=0.466  Sum_probs=52.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|++|.||++.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVE   64 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccc
Confidence            688999999999999999999888888999987753333345667889999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0194|consensus

Probab=98.99  E-value=2.3e-09  Score=66.59  Aligned_cols=74  Identities=23%  Similarity=0.245  Sum_probs=56.8

Q ss_pred             eecCeeeeee-cceEEeeeecccCceEEEEEEECCCCc---E-EEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          21 EVGDTKFTIL-KRYQNLKPIGSGAQGIVCAAYDTATQQ---N-VAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        21 ~~~~~~~~~~-~~~~~~~~lg~g~~~~v~~~~~~~~~~---~-~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+....|++. ++..+.+.||+|+||.||.|.....+.   . ||+|..... .........+++|+++|+.++|+|||+
T Consensus       146 PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr  225 (474)
T KOG0194|consen  146 PIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR  225 (474)
T ss_pred             cccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            4455667665 356677999999999999998753322   2 788877742 356778899999999999999999974

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.98  E-value=3.7e-09  Score=64.18  Aligned_cols=63  Identities=24%  Similarity=0.311  Sum_probs=53.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~   65 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVK   65 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeee
Confidence            5888999999999999999988888999999887421 23345677899999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.98  E-value=4.5e-09  Score=62.70  Aligned_cols=65  Identities=20%  Similarity=0.261  Sum_probs=54.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+.... ......+.+.+|+.++..++|+||++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   82 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVN   82 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCc
Confidence            578999999999999999999998888899999877421 12244567889999999999999974

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=3.3e-09  Score=62.18  Aligned_cols=64  Identities=20%  Similarity=0.331  Sum_probs=52.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+.... ......+.+.+|+.++..++||||++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   65 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIR   65 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhh
Confidence            36888999999999999999988788899999886421 12345567889999999999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.98  E-value=3.5e-09  Score=63.42  Aligned_cols=73  Identities=53%  Similarity=0.803  Sum_probs=58.2

Q ss_pred             ecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        22 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+..|.+..+|.....||.|++|.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         6 ~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~   78 (342)
T cd07879           6 VNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIG   78 (342)
T ss_pred             hhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccc
Confidence            3344567778999999999999999999998778889999987743223334556789999999999999874

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=5.2e-09  Score=63.05  Aligned_cols=64  Identities=22%  Similarity=0.246  Sum_probs=52.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||.|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~   65 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVK   65 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc
Confidence            36889999999999999999998888899999887421 22345567889999999999999974

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.96  E-value=4.8e-09  Score=63.51  Aligned_cols=64  Identities=23%  Similarity=0.277  Sum_probs=52.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+.... ......+.+.+|+.++..++|+||++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~   65 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVK   65 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcce
Confidence            36899999999999999999988888999999887421 12234567889999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0605|consensus

Probab=98.95  E-value=1.5e-09  Score=67.44  Aligned_cols=66  Identities=26%  Similarity=0.246  Sum_probs=58.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      -.++|.++..||+|+||.||++..+.+|..+|+|.+.+.. ...........|-.+|...++++||+
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVK  205 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVK  205 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEE
Confidence            3578999999999999999999999999999999999743 35567888999999999999999984

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.94  E-value=8.5e-09  Score=61.79  Aligned_cols=72  Identities=57%  Similarity=0.944  Sum_probs=58.4

Q ss_pred             ecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        22 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..+..+.+.++|.+...||+|.+|.+|++....++..+++|.+............+.+|+.+++.+.|+|++
T Consensus         6 ~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   77 (343)
T cd07851           6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVI   77 (343)
T ss_pred             hccceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHH
Confidence            345567778899999999999999999999877888999998764322334556678899999999999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.94  E-value=7.9e-09  Score=62.72  Aligned_cols=63  Identities=22%  Similarity=0.270  Sum_probs=52.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~   65 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVR   65 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCe
Confidence            5888999999999999999988888899999887421 22345677889999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.93  E-value=1.1e-08  Score=61.11  Aligned_cols=67  Identities=45%  Similarity=0.755  Sum_probs=54.4

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++...|.+.+.||.|++|.||.+....++..+++|.+............+..|+.++..++|+||++
T Consensus         2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~   68 (337)
T cd07858           2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIA   68 (337)
T ss_pred             ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccc
Confidence            4456799999999999999999998888889999987743223334566788999999999999974

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.93  E-value=5.4e-09  Score=61.18  Aligned_cols=64  Identities=27%  Similarity=0.373  Sum_probs=52.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|+||.||++....++..+++|.+.... .......+.+|+.++..++|+||++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~   67 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVT   67 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEee
Confidence            567999999999999999999988888899999876421 1223456778999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.92  E-value=7.9e-09  Score=60.83  Aligned_cols=65  Identities=23%  Similarity=0.275  Sum_probs=52.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||.|.||.||++.....+..+++|.+.... .......+.+|+.++..++|+||++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~   67 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQE-EEGTPFTAIREASLLKGLKHANIVL   67 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccc-ccccchhHHHHHHHHhhCCCCCcCe
Confidence            3567999999999999999999987788899999887422 1123345678999999999999974

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=8.3e-09  Score=62.52  Aligned_cols=63  Identities=21%  Similarity=0.178  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|+||.||++.....+..+++|.+.... ......+.+..|+.++..++|+||++
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   65 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVS   65 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcce
Confidence            6889999999999999999988888899999876421 12345567889999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG1187|consensus

Probab=98.92  E-value=3.9e-09  Score=63.98  Aligned_cols=62  Identities=21%  Similarity=0.312  Sum_probs=49.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +++|.....||+|+||.||+|... .+..+++|.+...... . ...|.+|+.++.+++|+|+|+
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~-~-~~eF~~Ei~~ls~l~H~Nlv~  135 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQ-G-EREFLNEVEILSRLRHPNLVK  135 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCc-c-hhHHHHHHHHHhcCCCcCccc
Confidence            567888899999999999999984 4478999977742111 1 455999999999999999985

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.92  E-value=1.3e-08  Score=60.79  Aligned_cols=69  Identities=51%  Similarity=0.838  Sum_probs=56.1

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+....+|.+.+.||.|.+|.||++.....+..+++|.+..........+.+..|+.++..++|||+++
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   73 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIIS   73 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeee
Confidence            355677899999999999999999998788889999987643223334567788999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4250|consensus

Probab=98.91  E-value=7.7e-10  Score=70.55  Aligned_cols=62  Identities=26%  Similarity=0.407  Sum_probs=53.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+...+.||+|+||.||++.++.+|..+|+|..+.. ......+.+.+|+++|+++.|+|||+
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~-~~~r~~e~~~~EieilkKLnh~NIVk   75 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKE-SSLRPRERWCREIEILKKLNHPNIVK   75 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhh-cccchHHHHHHHHHHHHHcCchhhhh
Confidence            466778999999999999999899999999987742 23456788999999999999999985

>KOG0586|consensus

Probab=98.90  E-value=1.1e-08  Score=64.44  Aligned_cols=65  Identities=31%  Similarity=0.370  Sum_probs=58.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||+|.|+.|..+.+..++..+++|.+.+...+....+.+.+|+++|..++|||||+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvk  119 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVK  119 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceee
Confidence            45789999999999999999999888999999999976566667777999999999999999974

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=1.4e-08  Score=60.60  Aligned_cols=63  Identities=19%  Similarity=0.333  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~   65 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVK   65 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCcc
Confidence            6889999999999999999988888899999887431 12235567889999999999999974

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.89  E-value=2.5e-08  Score=66.77  Aligned_cols=67  Identities=25%  Similarity=0.302  Sum_probs=56.8

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+..+|.+.+.||.|.||.||++.+...+..+++|.+............+..|+.++..++|+|||+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVr   76 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVR   76 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCe
Confidence            3467899999999999999999999888888999987754334556778899999999999999974

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.88  E-value=1.6e-08  Score=61.09  Aligned_cols=64  Identities=22%  Similarity=0.198  Sum_probs=52.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|+||.||++.....+..+++|.+.... ........+..|+.++..++|++|++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~   65 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVK   65 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcce
Confidence            36889999999999999999988888899999887421 12334567888999999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.88  E-value=3.4e-08  Score=58.95  Aligned_cols=64  Identities=14%  Similarity=0.230  Sum_probs=53.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.....+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   67 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVG   67 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCCCCe
Confidence            35799999999999999999998888888999987742 23345678999999999999999974

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.87  E-value=1.5e-08  Score=59.82  Aligned_cols=66  Identities=24%  Similarity=0.336  Sum_probs=52.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|.+.+.||+|+||.||++.....+..+++|.+.... .......+.+|+.++..++|+||++
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~   68 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVT   68 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccc-cCCcchhHHHHHHHHHhCCCCCcce
Confidence            34568999999999999999999987788889999877422 1223345678999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.86  E-value=2.2e-08  Score=58.30  Aligned_cols=63  Identities=32%  Similarity=0.468  Sum_probs=51.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.+|++.....+..+++|.+............+..|+.++.+++|+||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   63 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK   63 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcc
Confidence            478889999999999999998778889999987643222234457889999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0658|consensus

Probab=98.86  E-value=4e-09  Score=62.93  Aligned_cols=57  Identities=33%  Similarity=0.540  Sum_probs=46.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+++|.|+||.||++....++..+|+|......      .--.+|+.+|+.++|||||+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~   81 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVR   81 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeee
Confidence            5788899999999999999988888899999766321      12257899999999999984

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.85  E-value=3.7e-08  Score=58.83  Aligned_cols=65  Identities=42%  Similarity=0.623  Sum_probs=53.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||.|.+|.||.+....++..+++|.+... ........+..|+.++..++|+|+++
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~   67 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF-EHQTFCQRTLREIKILRRFKHENIIG   67 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc-ccchhHHHHHHHHHHHHhCCCCCcCc
Confidence            456899999999999999999998788889999987631 22335566788999999999999874

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.85  E-value=4e-08  Score=65.39  Aligned_cols=64  Identities=33%  Similarity=0.480  Sum_probs=53.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.+...+..+++|.+.... ........+.+|+.++..++||||++
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVk   66 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVP   66 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCe
Confidence            57999999999999999999988888899999887432 23345677999999999999999974

>KOG0580|consensus

Probab=98.85  E-value=6.5e-10  Score=63.37  Aligned_cols=66  Identities=23%  Similarity=0.310  Sum_probs=54.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|.||.||.++...+.-.+++|.+.+.. ...+....+.+|+++-..|+||||++
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilr   86 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILR   86 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHh
Confidence            3678999999999999999999988888899999888632 22334567889999999999999863

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.85  E-value=4.3e-08  Score=59.54  Aligned_cols=67  Identities=15%  Similarity=0.119  Sum_probs=52.0

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECC-CCcEEEEEecCCccc---CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTA-TQQNVAIKKLSRPFQ---NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..+..+|.+.+.||+|+||.||++.+.. .+..+++|.+.....   .......+.+|+.+|..++|++++
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv   84 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVV   84 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCC
Confidence            3456789999999999999999998754 566678987653211   233466789999999999999986

>KOG0585|consensus

Probab=98.85  E-value=7.4e-09  Score=64.06  Aligned_cols=65  Identities=32%  Similarity=0.405  Sum_probs=53.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH------------HHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV------------THAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+...||+|.||.|.++.....+..+|+|++.+.....            ...+...+|+.+|.++.|+|||+
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            567899999999999999999998899999999988521111            12457899999999999999984

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.84  E-value=3.1e-08  Score=57.68  Aligned_cols=63  Identities=33%  Similarity=0.491  Sum_probs=51.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.+|.||++.....+..+++|.+..........+.+..|+.++..++|+||++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   64 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVN   64 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhh
Confidence            688899999999999999998777888999987643222234567888999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.84  E-value=3.8e-08  Score=56.75  Aligned_cols=64  Identities=28%  Similarity=0.324  Sum_probs=53.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.||.||++.....+..+++|.+... .........+..|+.++..++|+|+++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIK   66 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceee
Confidence            4789999999999999999998778889999977642 234455677899999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.84  E-value=2.5e-08  Score=59.52  Aligned_cols=65  Identities=43%  Similarity=0.698  Sum_probs=53.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.||++.....+..+++|.+............+..|+.++..++|+||++
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   68 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIA   68 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccC
Confidence            46789999999999999999998888889999988753223345667788999999999999874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0032|consensus

Probab=98.84  E-value=1.1e-08  Score=62.41  Aligned_cols=66  Identities=21%  Similarity=0.373  Sum_probs=55.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      +...|.+.+.||.|.||.||.|....++..+++|.+.+... .......+.+|+.+|.++. |||||.
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~  100 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQ  100 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEE
Confidence            45579999999999999999999988899999999886432 3345678999999999997 999873

>KOG0192|consensus

Probab=98.83  E-value=1.1e-08  Score=61.97  Aligned_cols=62  Identities=27%  Similarity=0.278  Sum_probs=48.3

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .......+|.|+||.||++.+... ..+++|.+..........+.|.+|+.+|.+++|||||.
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~  103 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQ  103 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeee
Confidence            345556799999999999998422 23899988854333344789999999999999999984

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=2.3e-08  Score=59.84  Aligned_cols=64  Identities=22%  Similarity=0.219  Sum_probs=52.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|+||.||++....++..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   65 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVK   65 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccc
Confidence            36889999999999999999988788999999887432 12245667889999999999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.83  E-value=3.1e-08  Score=58.26  Aligned_cols=65  Identities=26%  Similarity=0.347  Sum_probs=52.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||.|++|.||++....++..+++|.+.... .......+..|+.++..++|+||++
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~   68 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVT   68 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccc-ccCchhHHHHHHHHHHhcCCCCcce
Confidence            4568999999999999999999987788899999876421 2223445678999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=2.8e-08  Score=58.09  Aligned_cols=63  Identities=27%  Similarity=0.339  Sum_probs=49.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|++.+.||+|+||.||++.....+..+++|.+..... .......+.+|+.++..++|++|++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS   64 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee
Confidence            47888999999999999999877888999998874221 2223456778999999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.82  E-value=3.9e-08  Score=61.83  Aligned_cols=65  Identities=22%  Similarity=0.201  Sum_probs=54.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...+|.+.+.||.|+||.||++.....+..+++|.+............+..|+.++..++|++++
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv   94 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIV   94 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEE
Confidence            35689999999999999999999878889999998875434455667788999999999999876

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.82  E-value=2.4e-08  Score=58.39  Aligned_cols=62  Identities=27%  Similarity=0.352  Sum_probs=49.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .|+..+.||+|+||.||++....++..+++|.+..... .......+.+|+.++..++|++++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv   63 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVV   63 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEE
Confidence            37788999999999999999888889999998774221 223345678899999999999886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.82  E-value=3.7e-08  Score=60.27  Aligned_cols=56  Identities=23%  Similarity=0.362  Sum_probs=48.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|+||.||++.+...+..+++|...        ...+.+|+.++..++||||++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~  147 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQ  147 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCC
Confidence            57999999999999999999998888899999643        234678999999999999984

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.81  E-value=6.1e-08  Score=55.63  Aligned_cols=63  Identities=17%  Similarity=0.297  Sum_probs=52.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|.+|.+|++.....+..+++|.+..........+.+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVR   63 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccce
Confidence            478889999999999999998778888999987643334556678899999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.81  E-value=3.1e-08  Score=58.25  Aligned_cols=65  Identities=32%  Similarity=0.402  Sum_probs=51.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.||++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVP   71 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccc
Confidence            56899999999999999999998778888999987642222222345678999999999999974

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.81  E-value=2.8e-08  Score=57.00  Aligned_cols=61  Identities=28%  Similarity=0.451  Sum_probs=49.1

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |++.+.||+|++|.||++.....+..+++|.+...............|+.++.++.|+||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~   61 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIV   61 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBC
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccc
Confidence            7888999999999999999988888899999885322223333445699999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.81  E-value=4.6e-08  Score=58.53  Aligned_cols=64  Identities=14%  Similarity=0.230  Sum_probs=53.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.||.||++.+..++..+++|.+... ........+.+|+.++..++|+||++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   67 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVG   67 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCcccc
Confidence            35799999999999999999998878888899987642 23345677899999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0611|consensus

Probab=98.81  E-value=1.5e-09  Score=66.32  Aligned_cols=67  Identities=25%  Similarity=0.460  Sum_probs=57.8

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .....+|.+.+.||+|.+|.|-++.....+..+++|.+.+. ..+.++.-.+.+|+++|..|+||||+
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII  116 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHII  116 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCcee
Confidence            34566889999999999999999988788999999999874 34567778899999999999999986

>KOG0582|consensus

Probab=98.81  E-value=3.3e-08  Score=60.82  Aligned_cols=64  Identities=30%  Similarity=0.354  Sum_probs=55.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+.+.||.|.-+.||++.....+..|+||+++....+ .+...+.+|+..|..++||||++
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~-~~ld~l~kE~~~msl~~HPNIv~   88 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN-NDLDALRKEVQTMSLIDHPNIVT   88 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh-hhHHHHHHHHHHhhhcCCCCcce
Confidence            46799999999999999999998888899999999864333 34789999999999999999984

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.81  E-value=2e-08  Score=60.42  Aligned_cols=64  Identities=30%  Similarity=0.408  Sum_probs=53.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|...+.||.|.||.||++.+...+..+++|.+... ........+.+|+.++..++|+||++
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~  136 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN-HEDTVRRQICREIEILRDVNHPNVVK  136 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecC-CcHHHHHHHHHHHHHHHhCCCCCcce
Confidence            45688889999999999999998778889999987632 23345677899999999999999974

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.81  E-value=6e-08  Score=55.55  Aligned_cols=63  Identities=29%  Similarity=0.431  Sum_probs=52.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.+|.+.....+..+++|.+............+..|+.++++++|+|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE   63 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhh
Confidence            478899999999999999988778888999988753334455678899999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG1095|consensus

Probab=98.80  E-value=2.9e-08  Score=66.26  Aligned_cols=63  Identities=27%  Similarity=0.347  Sum_probs=51.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc-----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ-----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ......+.||+|.||.||.|.......     .+++|.+.. ....+...+|++|..+|+.++|||||+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~-~~~~~~~~~Fl~Ea~~m~~f~HpNiv~  759 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR-LSSEQEVSDFLKEALLMSKFDHPNIVS  759 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc-cCCHHHHHHHHHHHHHHhcCCCcceee
Confidence            346778999999999999998643322     378888774 346788999999999999999999984

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.80  E-value=3.8e-08  Score=56.54  Aligned_cols=63  Identities=22%  Similarity=0.387  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||.|+++.+|.+....++..+++|.+.... ......+.+..|+.++.+++|+||++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   64 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN   64 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHH
Confidence            4788999999999999999987788889999887432 22345678999999999999999863

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.80  E-value=4.6e-08  Score=58.44  Aligned_cols=64  Identities=22%  Similarity=0.199  Sum_probs=51.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+.+. .......+.+..|+.++..++|++|++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   65 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITN   65 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCc
Confidence            3688999999999999999998888889999988742 122334566888999999999999873

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.80  E-value=5.2e-08  Score=58.41  Aligned_cols=64  Identities=33%  Similarity=0.645  Sum_probs=53.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +..+|.+.+.||.|++|.||++....++..+++|.+...  .......+..|+.++..++|+||++
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~   66 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLT--DPQSVKHALREIKIIRRLDHDNIVK   66 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecC--CCchHHHHHHHHHHHHhcCCCcchh
Confidence            456899999999999999999998888889999987642  2245567888999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.79  E-value=4.1e-08  Score=57.14  Aligned_cols=63  Identities=30%  Similarity=0.438  Sum_probs=50.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.+|.||++.....+..+++|.+............+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   63 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVC   63 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEee
Confidence            478889999999999999998778889999987643222234466788999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.79  E-value=8.4e-08  Score=54.94  Aligned_cols=63  Identities=19%  Similarity=0.309  Sum_probs=52.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||+|.+|.+|++.....+..+++|.+............+..|+.+++.++|+|+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   63 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIR   63 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeeh
Confidence            477889999999999999998778888999987643334556778899999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.79  E-value=5.9e-08  Score=56.51  Aligned_cols=62  Identities=21%  Similarity=0.279  Sum_probs=51.3

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||+|.+|.||++.+...+..+++|.+... ........+..|+.++.+++|+|+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   63 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIG   63 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeee
Confidence            577889999999999999998778888999987642 23345567889999999999999874

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.78  E-value=6.5e-08  Score=55.50  Aligned_cols=63  Identities=17%  Similarity=0.316  Sum_probs=52.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|+..+.||+|.+|.+|.+.....+..+++|.+............+.+|+.+++.++|+|+++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ   63 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeee
Confidence            478899999999999999998778888999987643233445668899999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.78  E-value=6.6e-08  Score=55.47  Aligned_cols=63  Identities=21%  Similarity=0.290  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|+..+.+|.|++|.++.+.....+..+++|.+............+.+|+.++++++|+||++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   63 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIA   63 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeE
Confidence            478899999999999999888778888999987743334456677889999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.78  E-value=5.4e-08  Score=57.21  Aligned_cols=65  Identities=34%  Similarity=0.483  Sum_probs=51.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|...+.||.|.+|.||++.....+..+++|.+............+.+|+.++.+++|+|+++
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   75 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   75 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccc
Confidence            56799999999999999999998888889999987642222223345568999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0661|consensus

Probab=98.78  E-value=2.1e-09  Score=66.26  Aligned_cols=66  Identities=30%  Similarity=0.456  Sum_probs=53.7

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      .+..+|.+.+.||.|.||.||++....++..||+|.+.+.... .+...=++|+..|++++ ||||++
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniik   73 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIK   73 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchh
Confidence            3467899999999999999999998889999999988753222 23344578999999998 999984

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.78  E-value=4.3e-08  Score=59.48  Aligned_cols=65  Identities=23%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|.||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~  107 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQ  107 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcce
Confidence            467999999999999999999988888899999886421 12234456788999999999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.78  E-value=3e-08  Score=57.70  Aligned_cols=63  Identities=32%  Similarity=0.469  Sum_probs=50.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.+|.||++.....+..+++|.+............+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   63 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR   63 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeee
Confidence            478889999999999999998888889999987642222223456778999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.78  E-value=4.2e-08  Score=60.85  Aligned_cols=59  Identities=36%  Similarity=0.436  Sum_probs=48.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||+|+||.||++.....+..+++|.+...      .....+|+.++..++|+||++
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~------~~~~~~Ei~il~~l~h~niv~  123 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD------PQYKNRELLIMKNLNHINIIF  123 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC------cchHHHHHHHHHhcCCCCCcc
Confidence            35799999999999999999998778889999977531      122346999999999999974

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.78  E-value=5.2e-08  Score=57.06  Aligned_cols=64  Identities=30%  Similarity=0.506  Sum_probs=51.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.+|++.....+..+++|.+............+.+|+.++..++|+|+++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   65 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR   65 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEee
Confidence            4689999999999999999998778888999987643222234466788999999999999874

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.77  E-value=9.2e-08  Score=54.85  Aligned_cols=63  Identities=24%  Similarity=0.309  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.+|.|.+|.+|.+.....+..+++|.+..........+.+..|+.++.+++|+|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVA   63 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            488899999999999999998777888999988643334456677889999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.77  E-value=8e-08  Score=56.95  Aligned_cols=63  Identities=27%  Similarity=0.342  Sum_probs=49.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|+..+.||+|+||.||++.+...+.    .+++|.+.. .......+.+..|+.++..++|+||++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~   73 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE-ATSPKANKEILDEAYVMASVDNPHVCR   73 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccc-cCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            468999999999999999998644443    378888763 223445677889999999999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.76  E-value=1.3e-07  Score=55.95  Aligned_cols=62  Identities=18%  Similarity=0.275  Sum_probs=51.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||+|.||.||++....++..+++|.+... ........+.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   63 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIRNQIIRELKVLHECNSPYIVG   63 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            588999999999999999998777888888877632 23345567889999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.76  E-value=5.2e-08  Score=58.78  Aligned_cols=64  Identities=22%  Similarity=0.197  Sum_probs=52.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|...+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+++++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   65 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVK   65 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEee
Confidence            36888999999999999999988888899999887421 22345567888999999999999873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.76  E-value=5e-08  Score=56.76  Aligned_cols=64  Identities=33%  Similarity=0.509  Sum_probs=51.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|+....||+|.+|.+|++.....+..+++|.+..........+.+..|+.++..++|+|+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   64 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVN   64 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEee
Confidence            3688899999999999999998777889999987642222233456789999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.76  E-value=8.7e-08  Score=55.73  Aligned_cols=63  Identities=37%  Similarity=0.461  Sum_probs=52.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|.+|.+|++.....+..+++|.+............+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVK   63 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcc
Confidence            478889999999999999998778889999987753323345677899999999999999874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.76  E-value=4.4e-08  Score=57.83  Aligned_cols=65  Identities=29%  Similarity=0.420  Sum_probs=51.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.||++.....+..+++|.+............+.+|+.++.+++|+|+++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   70 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVE   70 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcc
Confidence            46799999999999999999998888889999987642222222334567999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.76  E-value=5.8e-08  Score=56.52  Aligned_cols=63  Identities=33%  Similarity=0.511  Sum_probs=52.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||+|.+|.+|++.....+..+++|.+............+.+|+.++..++|+||++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   64 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVN   64 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeee
Confidence            688999999999999999998777888999987743333345678899999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.75  E-value=1.1e-07  Score=54.70  Aligned_cols=63  Identities=27%  Similarity=0.383  Sum_probs=52.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||+|.++.+|.+.....+..+++|.+............+..|+.++..++|+||++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~   63 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK   63 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhh
Confidence            478889999999999999988777888999987753333457788999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.75  E-value=1.4e-07  Score=54.41  Aligned_cols=64  Identities=23%  Similarity=0.332  Sum_probs=52.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|.+|.||.+....++..+++|.+....   ........+.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   68 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ   68 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeee
Confidence            46888999999999999999987888899999875321   12345678899999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.75  E-value=5.7e-08  Score=58.39  Aligned_cols=65  Identities=20%  Similarity=0.359  Sum_probs=51.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCC-cEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQ-QNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+ ..+++|.+.... ......+.+..|+.++..++||||++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~   95 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVN   95 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcc
Confidence            567999999999999999999864443 578999876421 22345667889999999999999974

>KOG0616|consensus

Probab=98.75  E-value=1.2e-08  Score=59.87  Aligned_cols=67  Identities=21%  Similarity=0.350  Sum_probs=57.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|+..+.||.|+||.|.+.+....+..+|+|.+.+. .......+...+|..+|..+.||++++
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~  108 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVK  108 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEE
Confidence            3467899999999999999999999888999999998864 234567888999999999999998863

>KOG0589|consensus

Probab=98.74  E-value=7.6e-09  Score=63.45  Aligned_cols=64  Identities=20%  Similarity=0.334  Sum_probs=56.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .++|..++.+|+|+||.++...+...+..+++|.+..............+|+.++.++.|||||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv   66 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIV   66 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCee
Confidence            4678999999999999999998888888899999987655666677899999999999999997

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.74  E-value=7.5e-08  Score=58.47  Aligned_cols=65  Identities=26%  Similarity=0.264  Sum_probs=53.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+.... ......+.+..|+.++..++||||++
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~  107 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ  107 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCe
Confidence            468999999999999999999998888899999876421 22334556788999999999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.74  E-value=5.9e-08  Score=58.93  Aligned_cols=65  Identities=26%  Similarity=0.261  Sum_probs=53.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.....+..+++|.+.+.. ........+..|+.++..++||||++
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~  107 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ  107 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEee
Confidence            467999999999999999999998888899999876421 22334556788999999999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.74  E-value=1.2e-07  Score=55.50  Aligned_cols=64  Identities=17%  Similarity=0.329  Sum_probs=52.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.||.+.....+..+++|.+.... ........+.+|+.++.+++|+||++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   65 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVN   65 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccc
Confidence            36889999999999999999987788899999876421 12345677889999999999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.74  E-value=8.5e-08  Score=54.95  Aligned_cols=63  Identities=24%  Similarity=0.385  Sum_probs=50.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.+|.|.+|.+|++.....+..+++|.+............+.+|+.+++.++|+|+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~   63 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVT   63 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhh
Confidence            478889999999999999998778888999987642222234567789999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0196|consensus

Probab=98.74  E-value=2.3e-08  Score=65.11  Aligned_cols=63  Identities=25%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +...+.++||.|.||+|+.|..+..+   ..+|||.+.. ....+...+|+.|+.+|.+.+||||++
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EAsIMGQFdHPNIIr  694 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEASIMGQFDHPNIIR  694 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhhhhcccCCCCcEEE
Confidence            45678899999999999999876554   3689999884 345667889999999999999999963

>KOG0199|consensus

Probab=98.74  E-value=1.5e-08  Score=65.52  Aligned_cols=64  Identities=23%  Similarity=0.222  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-Cc--EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-QQ--NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+...+.+.||+|.||.|++|.+... +.  .|++|++...... ....+|++|+.+|.+|+|+|+++
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliR  175 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIR  175 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeE
Confidence            34567778999999999999987433 33  5789998853222 37889999999999999999863

>KOG0662|consensus

Probab=98.73  E-value=6.9e-09  Score=57.51  Aligned_cols=63  Identities=30%  Similarity=0.460  Sum_probs=52.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|.+|.||+++...+...+++|.++....+.......++|+.++..+.|.|||+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivr   65 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR   65 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceee
Confidence            456678899999999999999888899999988854334445677899999999999999974

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.73  E-value=4.6e-08  Score=57.39  Aligned_cols=65  Identities=29%  Similarity=0.456  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.+|.|.+|.||++.....+..+++|.+............+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~   70 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVN   70 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeee
Confidence            45789999999999999999998777888999987642222233456778999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0694|consensus

Probab=98.73  E-value=5.9e-08  Score=62.06  Aligned_cols=65  Identities=23%  Similarity=0.280  Sum_probs=55.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.++||+|+||+|+++.....+..+|+|.+.+. ...+.+......|..++..+ .||.+++
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~  433 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVN  433 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEee
Confidence            56899999999999999999999999999999999875 34567788888999998877 5998763

>KOG0581|consensus

Probab=98.73  E-value=4.2e-08  Score=58.76  Aligned_cols=63  Identities=19%  Similarity=0.247  Sum_probs=54.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++......||+|.-|.|+++.++.++..+|+|.+.. .......+.+.+|++++...+||+||.
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~  141 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVG  141 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeee
Confidence            466778899999999999999999999999999853 245567888999999999999999984

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.73  E-value=1.2e-07  Score=55.43  Aligned_cols=61  Identities=26%  Similarity=0.343  Sum_probs=48.9

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |...+.||.|+||.||.+.....+..+++|.+..... .......+..|+.++..++|++++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~   63 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVV   63 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCce
Confidence            6677899999999999999888888999998874321 223345678899999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.73  E-value=8.2e-08  Score=55.46  Aligned_cols=62  Identities=24%  Similarity=0.250  Sum_probs=48.5

Q ss_pred             eEEeeeecccCceEEEEEEECC---CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |++.+.||+|+||.||.+....   ....+++|.+............+.+|+..+..++|+|+++
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   65 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK   65 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4567899999999999998643   2367899987753334455678899999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.73  E-value=1e-07  Score=56.82  Aligned_cols=63  Identities=16%  Similarity=0.174  Sum_probs=51.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.||.||++.....+..+++|.+..... .......+..|+.++..++|++|++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~   65 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQ   65 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc
Confidence            68899999999999999999888888999998874321 2335567888999999999999873

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.73  E-value=9.8e-08  Score=56.22  Aligned_cols=63  Identities=19%  Similarity=0.180  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEECC----------------CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA----------------TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~----------------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++....                .+..+++|.+... ........+.+|+.++.+++|+||++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            468899999999999999987422                2336889987742 23445678999999999999999873

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.72  E-value=6.2e-08  Score=56.63  Aligned_cols=65  Identities=28%  Similarity=0.357  Sum_probs=51.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||.|.+|.||++.....+..+++|.+..... ......+.+|+.++..++|+||++
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~   67 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVT   67 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceee
Confidence            45689999999999999999999877788899998764211 112234678999999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0193|consensus

Probab=98.72  E-value=2.1e-08  Score=63.52  Aligned_cols=61  Identities=23%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+...+...||+|.||.||+|.+..   .||||.+..........+.|.+|+.++++-+|-||+
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIl  451 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENIL  451 (678)
T ss_pred             HHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhhe
Confidence            3456778999999999999998742   379999886556777899999999999999999986

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.72  E-value=1.5e-07  Score=54.50  Aligned_cols=63  Identities=19%  Similarity=0.235  Sum_probs=49.4

Q ss_pred             cceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||+|+||.||++...   ..+..+++|.+... ........+..|+.++..++|+||++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~   70 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVR   70 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            46899999999999999998753   33457888987742 23344567899999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.71  E-value=8e-08  Score=55.91  Aligned_cols=62  Identities=35%  Similarity=0.508  Sum_probs=49.7

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |++.+.||.|.+|.+|++.....+..+++|.+............+.+|+.++..++|+++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~   62 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVR   62 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccC
Confidence            46678999999999999998778889999987743222233456788999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.71  E-value=8.8e-08  Score=57.04  Aligned_cols=58  Identities=21%  Similarity=0.265  Sum_probs=47.0

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~   59 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTA   59 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCC
Confidence            36899999999999988888999999887432 23345567889999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG1026|consensus

Probab=98.71  E-value=6e-09  Score=67.49  Aligned_cols=64  Identities=25%  Similarity=0.230  Sum_probs=50.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+....+.||+|+||+||+++...     ....|+||.++. ....+..++|.+|++++..++|+|||+
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd-~a~~~~~~dF~REaeLla~l~H~nIVr  553 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKD-KAENQARQDFRREAELLAELQHPNIVR  553 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcc-cccHHHHHHHHHHHHHHHhccCCCeEE
Confidence            4567788999999999999987422     233588998884 234457899999999999999999984

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.71  E-value=2.1e-07  Score=60.46  Aligned_cols=65  Identities=20%  Similarity=0.282  Sum_probs=54.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.||.||++.+...+..+++|.+... .........+..|+.++..++|++|++
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~   68 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVH   68 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCe
Confidence            46799999999999999999999878889999988743 223445677889999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.71  E-value=1.2e-07  Score=54.79  Aligned_cols=61  Identities=23%  Similarity=0.221  Sum_probs=48.1

Q ss_pred             EEeeeecccCceEEEEEEECCCCc--EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQQ--NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.||+|+||.||++.....+.  .+++|.+..........+.+..|+.++..++|+||++
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR   64 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            456789999999999998755543  5788887643334566788899999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.70  E-value=2e-07  Score=53.71  Aligned_cols=64  Identities=25%  Similarity=0.331  Sum_probs=52.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.+|++.....+..+++|.+... .......+.+.+|+.++.+++|+++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~   66 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIK   66 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeee
Confidence            4689999999999999999998778889999987632 223345678899999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.70  E-value=4.9e-08  Score=58.31  Aligned_cols=63  Identities=30%  Similarity=0.363  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++...     ..+..+++|.+... ........+..|+.++..+ +|+||++
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~   75 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVN   75 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceee
Confidence            46899999999999999998742     23456889987632 2334567789999999999 8999973

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.70  E-value=2.4e-07  Score=52.94  Aligned_cols=63  Identities=24%  Similarity=0.373  Sum_probs=52.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|.+|.+|.+.....+..+++|.+............+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   63 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIK   63 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhh
Confidence            478889999999999999998777888999988753334466778899999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.70  E-value=2.3e-07  Score=53.60  Aligned_cols=64  Identities=23%  Similarity=0.340  Sum_probs=52.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc---ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP---FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|.+|.+|++.....+..+++|.+...   .........+.+|+.++..++|+||++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   68 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ   68 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcce
Confidence            4688999999999999999998778889999976531   112345678899999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.70  E-value=1.5e-07  Score=54.82  Aligned_cols=62  Identities=26%  Similarity=0.406  Sum_probs=49.7

Q ss_pred             cceEEeeeecccCceEEEEEEE----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYD----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|++.+.||+|+||.||.+..    ...+..+++|.+..  ......+.+.+|+.++..++|+|+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~   69 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH--STAEHLRDFEREIEILKSLQHDNIVK   69 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCCeeE
Confidence            3688899999999999999874    24566789998763  33455678899999999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.70  E-value=7.5e-08  Score=56.16  Aligned_cols=63  Identities=29%  Similarity=0.391  Sum_probs=45.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      +|.+.+.||+|++|.||++....++..+++|.+............+..|+.++..+   +|+||++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~   66 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR   66 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeee
Confidence            47888999999999999999888888999998774221222223445666666554   7999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.70  E-value=1.2e-07  Score=56.75  Aligned_cols=63  Identities=19%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+... .........+..|..++..+.|++|+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~   64 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWIT   64 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEe
Confidence            3689999999999999999998888889999987742 12233455678888999999999886

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0583|consensus

Probab=98.70  E-value=6.8e-08  Score=58.83  Aligned_cols=67  Identities=25%  Similarity=0.330  Sum_probs=54.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc--CH-HHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ--NV-THAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~-~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      ...+.|.+.+.||+|+||.|+.+.+..++..+|+|.+.+...  .. ...+.+.+|+.+++.+. ||||++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~   84 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIR   84 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeE
Confidence            446789999999999999999999888889999998775311  11 33556678999999998 999974

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.70  E-value=8.7e-08  Score=56.05  Aligned_cols=64  Identities=28%  Similarity=0.307  Sum_probs=50.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||+|.+|.||.+.....+..+++|.+.... .......+.+|+.++..++|+||++
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~   67 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKT-EEGVPFTAIREASLLKGLKHANIVL   67 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccC-cCCCcHHHHHHHHHHHhcCCCCEeE
Confidence            467999999999999999999987788899999876421 1222345678999999999999863

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.70  E-value=1e-07  Score=58.59  Aligned_cols=64  Identities=23%  Similarity=0.259  Sum_probs=49.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+...     ...+++|.+... ......+.+.+|+.++.++. ||||++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~  105 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVN  105 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeee
Confidence            34688999999999999999875322     235899988642 23345678999999999995 999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1094|consensus

Probab=98.70  E-value=5.1e-08  Score=61.97  Aligned_cols=61  Identities=23%  Similarity=0.255  Sum_probs=50.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...+.+.||+|.||+|..|.. .....+|+|.++. ........+|..|+++|.++.||||+.
T Consensus       539 ~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~-~a~~~~r~~F~kEIkiLsqLkhPNIve  599 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRP-DATKNARNDFLKEIKILSRLKHPNIVE  599 (807)
T ss_pred             heehhhhhcCcccceeEEEEe-cCceEEEEeecCc-ccchhHHHHHHHHHHHHhccCCCCeeE
Confidence            356778999999999999997 3467899998884 234456789999999999999999973

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.70  E-value=7e-08  Score=55.56  Aligned_cols=61  Identities=26%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||.|.||.||++.. ..+..+++|.+....   .....+..|+.++.+++|+|+++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~   65 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVR   65 (260)
T ss_pred             hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeee
Confidence            45789999999999999999986 456779999877422   23457889999999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.70  E-value=9.2e-08  Score=55.23  Aligned_cols=63  Identities=22%  Similarity=0.240  Sum_probs=51.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|.||.||++.....+..+++|.+...  .......+.+|+.++..++|+|+++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~~e~~~l~~~~h~~ii~   70 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE--PGDDFSLIQQEIFMVKECKHCNIVA   70 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC--ccchHHHHHHHHHHHHhcCCCCeee
Confidence            35689999999999999999998778888999987632  2233456788999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.69  E-value=2.6e-07  Score=53.04  Aligned_cols=62  Identities=21%  Similarity=0.387  Sum_probs=51.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||.|++|.+|.+.....+..+++|.+... ......+.+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   62 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLP-KSSSAVEDSRKEAVLLAKMKHPNIVA   62 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcC-cchHHHHHHHHHHHHHHhCCCCCcce
Confidence            478889999999999999998888888999987632 22345677888999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.69  E-value=1.7e-07  Score=53.92  Aligned_cols=62  Identities=31%  Similarity=0.400  Sum_probs=51.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|.+.+.+|.|++|.+|++.....+..+++|.+...... ...+.+..|+.++..++|+|++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~   62 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ-TSVDELRKEVQAMSQCNHPNVV   62 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc-hHHHHHHHHHHHHHhcCCCCEE
Confidence            3688999999999999999987777888999987643222 2667889999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.69  E-value=1.7e-07  Score=54.17  Aligned_cols=63  Identities=24%  Similarity=0.346  Sum_probs=51.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.+|+|.+|.+|++.....+..+++|.+....   ........+.+|+.++..++|+||++
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   68 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ   68 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeee
Confidence            5788899999999999999987788889999876421   12345567889999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.69  E-value=2.9e-07  Score=52.56  Aligned_cols=63  Identities=32%  Similarity=0.371  Sum_probs=52.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||+|.+|.+|++.....+..+++|.+............+..|+.++.+++|+++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK   63 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccE
Confidence            477889999999999999988777888999988754333356778999999999999999863

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.68  E-value=2.9e-07  Score=53.52  Aligned_cols=62  Identities=19%  Similarity=0.332  Sum_probs=47.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHH-HhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL-MKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~-l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|+||.||++.....+..+++|.+...... .....+..|+.. ++.++|+|+++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~iv~   64 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QEQKRLLMDLDISMRSVDCPYTVT   64 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCeee
Confidence            688899999999999999998888999999988743222 233455566665 55568999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.68  E-value=1.9e-07  Score=54.69  Aligned_cols=61  Identities=28%  Similarity=0.371  Sum_probs=49.1

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |+..+.||+|+||.||.+....++..+++|.+.... ........+..|+.++..++|++++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~   63 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVV   63 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCee
Confidence            667789999999999999998888899999877432 1223345677899999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.68  E-value=2.4e-07  Score=52.99  Aligned_cols=63  Identities=24%  Similarity=0.341  Sum_probs=51.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.+|.|.++.+|++.....+..+++|.+............+..|+.++..++|+||++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIIS   63 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchh
Confidence            478889999999999999988778888999987743334455677889999999999999873

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.68  E-value=7.2e-08  Score=58.61  Aligned_cols=63  Identities=29%  Similarity=0.404  Sum_probs=48.9

Q ss_pred             cceEEeeeecccCceEEEEEEE-----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++..     ...+..+++|.+... ......+.+.+|+.++..+ +||||++
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~il~~l~~HpnIv~  103 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHINIVN  103 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCC-cCcHHHHHHHHHHHHHHHhcCCcceee
Confidence            4689999999999999999863     234557899987632 2234556788999999999 8999974

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.68  E-value=2e-07  Score=54.69  Aligned_cols=63  Identities=33%  Similarity=0.402  Sum_probs=50.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC---HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN---VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.+|++.....+..+++|.+......   ......+..|+.++..++|+||++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   66 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG   66 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChh
Confidence            377888999999999999998777889999988743221   234556778999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.67  E-value=1.4e-07  Score=55.18  Aligned_cols=63  Identities=27%  Similarity=0.363  Sum_probs=44.9

Q ss_pred             ceEEeeeecccCceEEEEEEEC-CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDT-ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      +|.+.+.||+|+||.||++... ..+..+++|.+............+.+|+.++..+   .||||++
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~   68 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR   68 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcce
Confidence            6888999999999999999874 3456789998764322222334456677766655   6999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.67  E-value=8.1e-08  Score=55.43  Aligned_cols=64  Identities=27%  Similarity=0.284  Sum_probs=51.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.||++.....+..+++|.+... .........+.+|+.++..+.|+|+++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   66 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK   66 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhh
Confidence            4678889999999999999998778888999977642 123345678899999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.67  E-value=3.6e-07  Score=53.44  Aligned_cols=62  Identities=23%  Similarity=0.280  Sum_probs=51.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.+|.+.....+..+++|.+... ........+.+|++++..++|+||++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~   63 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTD-PNPDLQKQILRELEINKSCKSPYIVK   63 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecC-CchHHHHHHHHHHHHHHhCCCCCeee
Confidence            578889999999999999998778888999987742 22345677899999999999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.66  E-value=1.2e-07  Score=54.80  Aligned_cols=62  Identities=27%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             eEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.+.+.||+|++|.||++...   ..+..+++|.+..........+.+.+|+.+++.++|+|+++
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   65 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK   65 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcce
Confidence            456788999999999999753   24567899988754334456677899999999999999874

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0197|consensus

Probab=98.66  E-value=9.5e-09  Score=63.51  Aligned_cols=59  Identities=22%  Similarity=0.329  Sum_probs=47.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+...+.||+|.||.|+.|.+. ....+++|.+..   .....+.|.+|+.+|.+|+|++||+
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~---~~m~~~~f~~Ea~iMk~L~H~~lV~  265 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKE---GSMSPEAFLREAQIMKKLRHEKLVK  265 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEc-CCCcccceEEec---cccChhHHHHHHHHHHhCcccCeEE
Confidence            3567789999999999999984 444688887773   2345577889999999999999984

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.66  E-value=1.9e-07  Score=54.29  Aligned_cols=62  Identities=31%  Similarity=0.446  Sum_probs=50.3

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.+.+.||.|.+|.+|++.....+..+++|.+............+..|+.++..+.|+|+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   62 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVR   62 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeee
Confidence            56788999999999999998777888999988753223344567889999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.66  E-value=1.3e-07  Score=55.36  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=53.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|++.+.||.|.+|.||++.....+..+++|.+..  ......+.+..|+.++..+.|+|+++
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYMVEIEILATCNHPYIVK   73 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCcEee
Confidence            4568999999999999999999877888899998773  34556778899999999999999863

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.66  E-value=3.4e-07  Score=52.78  Aligned_cols=61  Identities=21%  Similarity=0.266  Sum_probs=49.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.. ..+..+++|.+..   .......+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~   65 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKP---GSMSVEAFLAEANVMKTLQHDKLVK   65 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEe-cCCccEEEEecCC---ChhHHHHHHHHHHHHHhcCCCCcce
Confidence            45799999999999999999976 3455688887763   2335677889999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0033|consensus

Probab=98.66  E-value=1e-10  Score=67.20  Aligned_cols=68  Identities=18%  Similarity=0.245  Sum_probs=58.3

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.+.|++.+.||+|.|+.|++|.+..++..+++|+++.........+.+.+|+.+...|+|||||.
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~Ivr   74 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR   74 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEee
Confidence            34567899999999999999999998889999999988865444457788999999999999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.66  E-value=1.8e-07  Score=55.93  Aligned_cols=58  Identities=21%  Similarity=0.273  Sum_probs=47.2

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   59 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTS   59 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc
Confidence            36899999999999988888999999887432 23345667889999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.66  E-value=1.6e-07  Score=56.02  Aligned_cols=58  Identities=21%  Similarity=0.257  Sum_probs=46.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~   59 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA   59 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcc
Confidence            36899999999999988888999999887431 13345567788999999999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.66  E-value=2e-07  Score=53.67  Aligned_cols=61  Identities=25%  Similarity=0.358  Sum_probs=49.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|++|.||++.. ..+..+++|.+..   .....+.+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKP---GTMSVQAFLEEANLMKTLQHDKLVR   65 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccC---CchhHHHHHHHHHHHHhCCCCCeee
Confidence            35789999999999999999986 4556788887663   2234678899999999999999873

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.66  E-value=9.9e-08  Score=57.27  Aligned_cols=63  Identities=32%  Similarity=0.392  Sum_probs=49.0

Q ss_pred             cceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|++.+.||.|+||.||++.+.     ..+..+++|.+... ........+.+|+.++..+ +|+||++
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~   75 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN   75 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccC-CChHHHHHHHHHHHHHHhccCCccHhh
Confidence            46999999999999999999742     34567899988742 2234566788999999999 6898863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.66  E-value=2e-07  Score=55.42  Aligned_cols=63  Identities=51%  Similarity=0.820  Sum_probs=52.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|.+|.+|++.....+..+++|.+..........+.+..|+.++..++|+||++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIG   63 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhh
Confidence            478889999999999999998777888999987753323455678899999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.65  E-value=1.8e-07  Score=54.75  Aligned_cols=63  Identities=29%  Similarity=0.402  Sum_probs=49.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +|.+.+.||+|.+|.||++.....+..+++|.+............+.+|+.++..+ +|+|+++
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~   65 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVR   65 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccc
Confidence            58889999999999999999888888999998764222222345678899999998 4688864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.65  E-value=1.1e-07  Score=56.58  Aligned_cols=60  Identities=23%  Similarity=0.210  Sum_probs=48.2

Q ss_pred             Eeeeeccc--CceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          35 NLKPIGSG--AQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        35 ~~~~lg~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++||+|  +|+.||++....++..+++|.+............+..|+.+++.++||||++
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~   63 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVP   63 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeee
Confidence            35688998  6788999998888999999998753334445667888999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.65  E-value=4.6e-07  Score=53.64  Aligned_cols=63  Identities=21%  Similarity=0.285  Sum_probs=52.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC-HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|+..+.||.|.+|.||.+.....+..+++|.+...... ....+.+..|+.++..++|++|++
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   65 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPT   65 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchh
Confidence            688899999999999999998777889999988753222 245677899999999999999874

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.64  E-value=4e-07  Score=52.33  Aligned_cols=62  Identities=31%  Similarity=0.358  Sum_probs=52.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.+|.|.+|.+|.+.....+..+++|.+...  .....+.+..|+.++..++|+|+++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~   64 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE--PGDDFEIIQQEISMLKECRHPNIVA   64 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC--chhhHHHHHHHHHHHHhCCCCChhc
Confidence            4689999999999999999998777788999987742  2335678899999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0198|consensus

Probab=98.64  E-value=8.4e-08  Score=57.15  Aligned_cols=63  Identities=22%  Similarity=0.375  Sum_probs=52.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++...+.||+|+||.||.+.....+...++|.+...  .....+.+.+|+.+|.+++|||||+
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~--~~~~~~~l~~Ei~iL~~l~~p~IV~   78 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE--DSPTSESLEREIRILSRLNHPNIVQ   78 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc--cchhHHHHHHHHHHHHhCCCCCEEe
Confidence            34578889999999999999998777888999987743  2222777899999999999999984

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.64  E-value=1.9e-07  Score=54.29  Aligned_cols=62  Identities=26%  Similarity=0.408  Sum_probs=49.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|+..+.||.|.+|.+|++....++..+++|.+.... .......+..|+.++..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~   62 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDA-EEGTPSTAIREISLMKELKHENIVR   62 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccc-cccchHHHHHHHHHHHhhcCCCEee
Confidence            4788999999999999999987788899999877421 1223456678999999999999863

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.64  E-value=1.7e-07  Score=53.86  Aligned_cols=60  Identities=25%  Similarity=0.306  Sum_probs=47.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++... .+..+++|.+...   ......+..|+.++..++|+||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~   63 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQ   63 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCcee
Confidence            45788899999999999999874 4457888976632   223456888999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.64  E-value=2.6e-07  Score=53.19  Aligned_cols=64  Identities=23%  Similarity=0.359  Sum_probs=51.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc---CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.+|.+.....+..+++|.+.....   .....+.+.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   68 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ   68 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeee
Confidence            468889999999999999998877788899998764211   1234567889999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.64  E-value=2e-07  Score=55.77  Aligned_cols=63  Identities=19%  Similarity=0.162  Sum_probs=50.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|++|+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~   64 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWIT   64 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEe
Confidence            36889999999999999999988888889999876421 1223445678888999999999886

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.63  E-value=3.9e-07  Score=52.66  Aligned_cols=63  Identities=25%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             cceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.....   ...+++|.+... ........+..|+.++..++|+||++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   69 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG-SSDKQRLDFLTEASIMGQFDHPNIIR   69 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCcce
Confidence            4688999999999999999986433   346888987642 23445677889999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.63  E-value=7.1e-08  Score=57.63  Aligned_cols=66  Identities=39%  Similarity=0.684  Sum_probs=53.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.++|.+.+.||.|.+|.+|++....++..+++|.+............+..|+.++.++ +|+||++
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~   71 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVK   71 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccc
Confidence            45678999999999999999999877788899998754322334456677899999999 9999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.63  E-value=2.5e-07  Score=53.43  Aligned_cols=61  Identities=21%  Similarity=0.278  Sum_probs=50.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|.+|.||++.....+..+++|.+..   .......+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~   66 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQ   66 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecC---CchHHHHHHHHHHHHHhCCCCChhh
Confidence            358888999999999999999877788899998763   2334567889999999999999873

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.63  E-value=2.9e-07  Score=53.11  Aligned_cols=63  Identities=21%  Similarity=0.280  Sum_probs=50.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc--C--HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ--N--VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~--~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|+..+.||+|.+|.+|.+....++..+++|.+.....  .  ....+.+..|+.++..++|+|+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   67 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR   67 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceeh
Confidence            36778899999999999998877888999998764221  1  224678899999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.63  E-value=4.4e-07  Score=51.79  Aligned_cols=63  Identities=21%  Similarity=0.310  Sum_probs=52.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||+|++|.+|++.....+..+++|.+..........+.+..|+.++.+++|+|+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVR   63 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEee
Confidence            367789999999999999998778888999987743333456788899999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.63  E-value=1.6e-07  Score=55.71  Aligned_cols=56  Identities=21%  Similarity=0.264  Sum_probs=45.6

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   57 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP   57 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEec
Confidence            689999999999988888899999887421 23345667889999999999999874

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.63  E-value=1.5e-07  Score=54.90  Aligned_cols=62  Identities=15%  Similarity=0.230  Sum_probs=51.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||.|++|.+|++.....+..+++|.+... ........+.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVD   63 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHh
Confidence            578889999999999999998778889999987632 23344577889999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.62  E-value=3.6e-07  Score=54.58  Aligned_cols=63  Identities=46%  Similarity=0.759  Sum_probs=49.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCC--CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTAT--QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +|.+.+.||.|.||.||++.....  +..+++|.+..........+.+..|+.++.++ .|+||++
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~   66 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITC   66 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChhe
Confidence            478889999999999999998766  77899998764322333456778899999988 6999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.62  E-value=2.2e-07  Score=55.31  Aligned_cols=62  Identities=21%  Similarity=0.176  Sum_probs=46.9

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHH---hhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLM---KLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l---~~l~~~~iv~   94 (94)
                      |.+.+.||+|.+|.||++.....+..+++|.+.... ......+.+..|+.++   ..++|+||++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~   66 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN   66 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhc
Confidence            567899999999999999988888899999887421 1233456677776655   4568999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG2345|consensus

Probab=98.62  E-value=1.3e-07  Score=54.54  Aligned_cols=68  Identities=25%  Similarity=0.238  Sum_probs=57.4

Q ss_pred             CeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          24 DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        24 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +..+.-.++|.+.+.||+|+|+.|+.+....++..+|+|.+..  ...++.+..++|++..++.+|||++
T Consensus        14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c--~~~~~~e~~~rEid~~rkf~s~~vl   81 (302)
T KOG2345|consen   14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC--HSQEDIEEALREIDNHRKFNSPNVL   81 (302)
T ss_pred             CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeec--cchHHHHHHHHHHHHHHhhCCcchH
Confidence            3334445689999999999999999999878888899998875  4467888999999999999999986

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.62  E-value=4.4e-07  Score=52.52  Aligned_cols=63  Identities=25%  Similarity=0.290  Sum_probs=50.5

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|.||.+|++.....+.   .+++|.+... ........+..|+.++..+.|+|+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~   69 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIH   69 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcce
Confidence            468899999999999999998754443   5889987642 24456678999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=8.2e-08  Score=55.84  Aligned_cols=63  Identities=19%  Similarity=0.208  Sum_probs=52.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.||++.....+..+++|.+..  ......+.+..|+.++..++|+|+++
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQI--ESEEELEDFMVEIDILSECKHPNIVG   66 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEee--CCHHHHHHHHHHHHHHHhCCCCceeE
Confidence            3568899999999999999999877788899998763  34456678899999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.61  E-value=3.1e-07  Score=54.17  Aligned_cols=63  Identities=30%  Similarity=0.365  Sum_probs=50.1

Q ss_pred             ceEEeeeecccCceEEEEEEECC--CCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTA--TQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|.+.+.||+|.+|.||++....  .+..+++|.+.... ........+.+|+.++..++|+|+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS   66 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccc
Confidence            47888999999999999999866  67889999877422 12233466788999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.61  E-value=2.4e-07  Score=54.67  Aligned_cols=65  Identities=31%  Similarity=0.407  Sum_probs=52.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|...+.||.|.+|.||.+.....+..+++|.+... .......+.+.+|+.++..++|+|+++
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~   79 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIE   79 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            34688889999999999999998777888999987642 233445677899999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0201|consensus

Probab=98.61  E-value=8.7e-08  Score=58.72  Aligned_cols=62  Identities=26%  Similarity=0.362  Sum_probs=52.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..|...++||+|+||.||+|.+..++..+|+|.+... ....+..++.+|+.++.++.++||.
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le-~~~deIediqqei~~Ls~~~~~~it   74 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE-EAEDEIEDIQQEISVLSQCDSPNIT   74 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechh-hcchhhHHHHHHHHHHHhcCcchHH
Confidence            3467779999999999999999889999999998852 3446788999999999999998874

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.61  E-value=3.7e-07  Score=53.74  Aligned_cols=63  Identities=32%  Similarity=0.452  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||.|.+|.+|++.....+..+++|.+...  .......+..|+.++..++|+|+++
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~   80 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKNPNIVN   80 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecC--ccchHHHHHHHHHHHHhCCCCCEee
Confidence            46799999999999999999998778889999987642  2234566889999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.61  E-value=4.8e-07  Score=52.34  Aligned_cols=63  Identities=27%  Similarity=0.304  Sum_probs=48.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|.||.||++.....+   ..+++|.+... ........+..|+.++..++||||++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   69 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIH   69 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCC-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            46889999999999999998764333   36788877632 23345678899999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1989|consensus

Probab=98.60  E-value=4.3e-07  Score=59.18  Aligned_cols=61  Identities=26%  Similarity=0.333  Sum_probs=52.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+.+.+.|.+|+|+.||.+.....+..+|+|++-.  .+....+.+.+|+.+|+.| .|+|||.
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~--~de~~L~~v~~EI~~MK~L~gh~nIV~   99 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV--NDEEALNAVKREIDIMKLLSGHKNIVS   99 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec--CCHHHHHHHHHHHHHHHHhcCCCceee
Confidence            46788999999999999999877768899997763  4677888999999999999 4999984

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.59  E-value=4.7e-07  Score=53.21  Aligned_cols=63  Identities=35%  Similarity=0.496  Sum_probs=51.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|.+|.+|++.....+..+++|.+..  ......+.+..|+.++..++|+|+++
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~   80 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNL--QQQPKKELIINEILVMRENKHPNIVN   80 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecc--ccchHHHHHHHHHHHHhhcCCCCeee
Confidence            3578999999999999999998777778899998763  22234567889999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.59  E-value=1.9e-07  Score=57.42  Aligned_cols=63  Identities=25%  Similarity=0.339  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.+..     ....+++|.+... ......+.+..|+.++..+. |+||++
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~E~~~l~~l~~H~niv~  105 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST-ARSSEKQALMSELKIMSHLGPHLNIVN  105 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC-CChhHHHHHHHHHHHHHhcCCCCCeEE
Confidence            468888999999999999998532     3347899998742 22334567889999999996 999873

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.59  E-value=3.8e-07  Score=53.17  Aligned_cols=63  Identities=21%  Similarity=0.329  Sum_probs=50.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..++|.+.+.||+|.+|.||++.....+..+++|.+..   .......+..|+.++..+ +|+|+++
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~   79 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP---IHDIDEEIEAEYNILKALSDHPNVVK   79 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc---ccchHHHHHHHHHHHHHHhcCCCeee
Confidence            45689999999999999999999877888899997663   122335677889999888 7999873

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.59  E-value=4.7e-07  Score=53.41  Aligned_cols=63  Identities=21%  Similarity=0.322  Sum_probs=51.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.+|.|.+|.+|++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   65 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVS   65 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeee
Confidence            6888999999999999999988888899999877421 12344567889999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0610|consensus

Probab=98.59  E-value=5.8e-08  Score=59.20  Aligned_cols=64  Identities=25%  Similarity=0.345  Sum_probs=54.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+.|.+++.||.|..|.||++....+...+|+|.+.+.. ..+....++..|-+||..++||.++
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlP  140 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLP  140 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccc
Confidence            346788899999999999999998888999999999743 3456777889999999999999886

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.59  E-value=3.6e-07  Score=52.67  Aligned_cols=60  Identities=25%  Similarity=0.309  Sum_probs=48.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|.+|.||++... .+..+++|.+...   ....+.+..|+.++.+++|+|+++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPG---TMDPKDFLAEAQIMKKLRHPKLIQ   65 (261)
T ss_pred             hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCC---cccHHHHHHHHHHHHHCCCCCccc
Confidence            56899999999999999999863 4567899987632   223456888999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.59  E-value=1.3e-07  Score=55.13  Aligned_cols=63  Identities=17%  Similarity=0.248  Sum_probs=51.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||+|.+|.||++.....+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   67 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIG-AKSSVRKQILRELQIMHECRSPYIVS   67 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEec-CcchHHHHHHHHHHHHHHcCCCCcce
Confidence            4688889999999999999998777888999876632 22345677899999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.59  E-value=4.1e-07  Score=53.02  Aligned_cols=63  Identities=24%  Similarity=0.215  Sum_probs=49.2

Q ss_pred             cceEEeeeecccCceEEEEEEEC----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||++...    ..+..+++|.+.. .........+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~   71 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKD-INNPQQWGEFQQEASLMAELHHPNIVC   71 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccC-CCCHHHHHHHHHHHHHHhhCCCCCeee
Confidence            56889999999999999998742    2445788888763 223445577889999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00284 protein kinase; Provisional

Probab=98.58  E-value=1.4e-06  Score=54.44  Aligned_cols=59  Identities=24%  Similarity=0.376  Sum_probs=44.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   91 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+..   .......+..|+.++..+.|.+
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~---~~~~~~~~~~e~~~l~~l~~~~  186 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN---VPKYTRDAKIEIQFMEKVRQAD  186 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec---chhhHHHHHHHHHHHHHHhhcC
Confidence            4679999999999999999999877888999998863   1223444566777776665543

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.58  E-value=3.4e-07  Score=53.25  Aligned_cols=62  Identities=24%  Similarity=0.340  Sum_probs=50.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      -|+..+.||.|.||.||++.....+..+++|.+... ........+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~   66 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTK   66 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccc-cchHHHHHHHHHHHHHHhcCCCCEeE
Confidence            477788999999999999988777888999986632 22345677899999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.58  E-value=9.7e-08  Score=55.91  Aligned_cols=63  Identities=29%  Similarity=0.418  Sum_probs=50.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|...+.||.|.+|.||++.....+..+++|.+............+.+|+.++.+++|+||+
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~   67 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIV   67 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEE
Confidence            468888999999999999999877888899998774322222334567899999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.58  E-value=4.1e-07  Score=54.23  Aligned_cols=58  Identities=21%  Similarity=0.259  Sum_probs=46.5

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~   59 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA   59 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCc
Confidence            36899999999999988888899999887432 22344567788999999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.58  E-value=3e-07  Score=55.96  Aligned_cols=63  Identities=27%  Similarity=0.342  Sum_probs=48.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||++.....     ...+++|.+... ........+.+|+.++..+ +|+||++
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~~h~nIv~  106 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS-AHTDEREALMSELKILSHLGQHKNIVN  106 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC-CCHHHHHHHHHHHHHHHhhccCCceee
Confidence            4689999999999999999874322     346899988742 2334566788999999998 8999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.57  E-value=3e-07  Score=54.60  Aligned_cols=58  Identities=26%  Similarity=0.275  Sum_probs=44.4

Q ss_pred             eeecccCceEEEEEEE---CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYD---TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++..   ...+..+++|.+............+..|+.++.+++|+||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   62 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK   62 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCccc
Confidence            5789999999998875   246778999988743222334556778999999999999974

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.57  E-value=5.6e-07  Score=53.02  Aligned_cols=62  Identities=34%  Similarity=0.486  Sum_probs=51.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|.+|.+|++.....+..+++|.+...  .......+..|+.++..++|+|+++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~   80 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ--KQPKKELIINEILVMKELKNPNIVN   80 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc--cCchHHHHHHHHHHHHhcCCCceee
Confidence            4699999999999999999988788889999987642  2234567889999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0668|consensus

Probab=98.57  E-value=1.8e-08  Score=57.66  Aligned_cols=77  Identities=17%  Similarity=0.246  Sum_probs=65.3

Q ss_pred             cCcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCC
Q psy3070          13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKN   91 (94)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~   91 (94)
                      .+..+|..+.....|...++|++.+.+|+|.+++||.|........+++|.+.     .-..+.+.+|+.+|..++ ++|
T Consensus        20 rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~N   94 (338)
T KOG0668|consen   20 RPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPN   94 (338)
T ss_pred             CchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCC
Confidence            36778888888888988899999999999999999999876677778889877     345678899999999995 999


Q ss_pred             CCC
Q psy3070          92 VSH   94 (94)
Q Consensus        92 iv~   94 (94)
                      |++
T Consensus        95 Ii~   97 (338)
T KOG0668|consen   95 IIK   97 (338)
T ss_pred             eee
Confidence            874

>KOG4717|consensus

Probab=98.57  E-value=3.8e-08  Score=62.01  Aligned_cols=65  Identities=26%  Similarity=0.360  Sum_probs=57.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+-|.+.+.||+|.|..|-++++.-+|..+++|.+.+...+.-....+.+|+.+|..++|||||+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVR   81 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVR   81 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeee
Confidence            34588999999999999999988889999999999976667677888999999999999999984

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.56  E-value=6.8e-07  Score=52.63  Aligned_cols=63  Identities=30%  Similarity=0.455  Sum_probs=51.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.+|.|.+|.||++.....+..+++|.+...  .......+.+|+.++..+.|+|+++
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~e~~~l~~~~h~~v~~   81 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILVMRENKNPNIVN   81 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhCCCCCEee
Confidence            45799999999999999999988777888999987742  2234567889999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.56  E-value=8.3e-07  Score=51.41  Aligned_cols=64  Identities=23%  Similarity=0.257  Sum_probs=51.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      ++|.+.+.||.|.+|.||++.....+..+++|.+..... .......+..|+.++.+++ |+||++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~   66 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIK   66 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchh
Confidence            368899999999999999999877888999998774221 2344567888999999998 999873

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.56  E-value=3.1e-07  Score=52.91  Aligned_cols=62  Identities=21%  Similarity=0.338  Sum_probs=51.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.||++.....+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE-INEAIQKQILRELDILHKCNSPYIVG   63 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecc-cChHHHHHHHHHHHHHHHCCCCchhh
Confidence            577788999999999999998778888999987742 22355677889999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.56  E-value=5.4e-07  Score=51.60  Aligned_cols=63  Identities=22%  Similarity=0.318  Sum_probs=50.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|+..+.||+|++|.+|++.....+..+++|.+....   ......+.+..|+.++..++|+|+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   66 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ   66 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchh
Confidence            3667789999999999999886678889999876321   12345677899999999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.55  E-value=4.6e-07  Score=52.14  Aligned_cols=61  Identities=20%  Similarity=0.251  Sum_probs=48.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.||++... ....+++|.+...   ......+..|+.++..++|+|+++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPG---TMSPEAFLQEAQIMKKLRHDKLVQ   65 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCC---ccCHHHHHHHHHHHhhCCCCCEee
Confidence            356899999999999999999874 4567899987742   223467889999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.55  E-value=4.3e-07  Score=56.84  Aligned_cols=56  Identities=18%  Similarity=0.237  Sum_probs=47.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|.+.+.||.|+||.||++.+...+..+++|....        ..+.+|+.++.+++|+|||+
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~  224 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLA  224 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCc
Confidence            369999999999999999999988888899995331        23468999999999999984

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.55  E-value=9.8e-07  Score=51.35  Aligned_cols=64  Identities=14%  Similarity=0.128  Sum_probs=50.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECC----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|.||.||.|....    .+..+++|.+.. .........+.+|+.++.+++|+|+++
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~   72 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILP   72 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            3578899999999999999998744    245678887663 224455777899999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.55  E-value=4.7e-07  Score=52.37  Aligned_cols=60  Identities=25%  Similarity=0.333  Sum_probs=47.2

Q ss_pred             EEeeeecccCceEEEEEEEC----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDT----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...+.||.|.||.||++.+.    ..+..+++|.+.. .........+..|+..+.+++|+||++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~   65 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVK   65 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccc
Confidence            45689999999999999875    2345688998853 234456888999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.55  E-value=3.3e-07  Score=53.42  Aligned_cols=60  Identities=20%  Similarity=0.292  Sum_probs=49.9

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |++.+.||.|.+|.+|++.....+..+++|.+..  ........+.+|+.++..++|+|+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~ii~   66 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNIVK   66 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCC--CCHHHHHHHHHHHHHHHHCCCCCeee
Confidence            6778899999999999999877788888888763  23456677889999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.55  E-value=5.6e-07  Score=51.58  Aligned_cols=57  Identities=23%  Similarity=0.279  Sum_probs=46.4

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||.|.+|.||.+.....+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   57 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVR   57 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3689999999999998778888999976632 23445677899999999999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.53  E-value=4.8e-07  Score=52.28  Aligned_cols=61  Identities=23%  Similarity=0.237  Sum_probs=48.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++..... ..+++|.+....   .....+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~   65 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQ   65 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcce
Confidence            35799999999999999999987444 468899877422   22356888999999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0667|consensus

Probab=98.53  E-value=6.5e-07  Score=56.92  Aligned_cols=54  Identities=35%  Similarity=0.560  Sum_probs=46.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      +|.+.+.||+|.||.|.+|.+..++..||+|++.   ...........|+.+|..++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiK---N~k~f~~Q~~~Ei~iL~~ln  240 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIK---NKKRFLRQAQIEIRILELLN  240 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeec---cChHHHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999988   34456666778888888875

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.53  E-value=3.9e-07  Score=52.87  Aligned_cols=62  Identities=24%  Similarity=0.280  Sum_probs=50.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...+.||.|.+|.+|++.....+..+++|.+.... .......+.+|+.+++.++|+|+++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~   63 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITK   63 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeee
Confidence            5778889999999999999987788899999876422 2344567889999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG1290|consensus

Probab=98.53  E-value=6.6e-07  Score=55.90  Aligned_cols=56  Identities=29%  Similarity=0.382  Sum_probs=49.7

Q ss_pred             ee-cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC
Q psy3070          29 IL-KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV   87 (94)
Q Consensus        29 ~~-~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l   87 (94)
                      |. .+|.+.+.||.|.|+.||++.+.....+||+|+..   ....+.+..+.||.+|.++
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvK---SAqhYtEaAlDEIklL~~v  131 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVK---SAQHYTEAALDEIKLLQQV  131 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEe---hhhHHHHHHHHHHHHHHHH
Confidence            44 68999999999999999999998888899999877   4567888999999999886

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.53  E-value=8e-07  Score=52.98  Aligned_cols=60  Identities=22%  Similarity=0.230  Sum_probs=47.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~   91 (94)
                      +|.+.+.||+|+||.||++.....+..+++|.+.... ........+..|..++..+.|++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~   61 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP   61 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC
Confidence            4788999999999999999988888899999887432 12345567788999988887654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.52  E-value=1.2e-06  Score=50.33  Aligned_cols=62  Identities=23%  Similarity=0.321  Sum_probs=51.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|++|.+|++.....+..+++|.+.... .......+..|+..+..++|+|+++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~   63 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG-DEEFRKQLLRELKTLRSCESPYVVK   63 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc-chHHHHHHHHHHHHHHhcCCCCeee
Confidence            5788899999999999999987788899999877422 1245678899999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0594|consensus

Probab=98.52  E-value=4.3e-08  Score=58.20  Aligned_cols=64  Identities=30%  Similarity=0.483  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCC-CC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN-VS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-iv   93 (94)
                      ...|...+.+|+|++|.||+|....++..+|+|.+........-.....+|+.++..+.|+| ||
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv   74 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIV   74 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceE
Confidence            44577778899999999999999899999999988853222234566789999999999998 65

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.51  E-value=1.3e-06  Score=50.58  Aligned_cols=60  Identities=28%  Similarity=0.411  Sum_probs=48.7

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.....||+|.+|.||++.+...+..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~   69 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPE--RDSRYVQPLHEEIALHSYLKHRNIVQ   69 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecC--CCHHHHHHHHHHHHHHHhcCCCCeee
Confidence            3444689999999999999877788899998763  33456678899999999999999874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.51  E-value=2.1e-07  Score=53.78  Aligned_cols=62  Identities=26%  Similarity=0.296  Sum_probs=50.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|.+|.+|.+.....+..+++|.+...  .......+.+|+.++..++|+|+++
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~~~~l~h~~ii~   70 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE--PGEDFAVVQQEIIMMKDCKHSNIVA   70 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC--chhHHHHHHHHHHHHHhCCCCCeee
Confidence            4688889999999999999998778888999987632  2234456788999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.51  E-value=9.4e-07  Score=51.02  Aligned_cols=62  Identities=26%  Similarity=0.343  Sum_probs=51.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.+|.+.....+..+++|.+..   .......+..|+.++.++ .|+|+++
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~e~~~l~~~~~h~~i~~   67 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDI---IEDEEEEIKEEYNILRKYSNHPNIAT   67 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEec---CchhHHHHHHHHHHHHHhcCCCChhe
Confidence            4679999999999999999999877778899998773   223456788999999998 7999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.51  E-value=5e-07  Score=52.59  Aligned_cols=63  Identities=27%  Similarity=0.294  Sum_probs=49.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCC-----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQ-----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|++|.||.+......     ..+++|.+... ........+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~   72 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVC   72 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccce
Confidence            46888999999999999999864433     46788877632 23345667899999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.51  E-value=7.3e-07  Score=51.62  Aligned_cols=63  Identities=24%  Similarity=0.343  Sum_probs=48.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc--------CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ--------NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||.|.+|.||++.....+..+++|.+.....        .....+.+..|+.++..++|+|+++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   72 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ   72 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            47778899999999999998877788899997653110        1123456788999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.50  E-value=4.8e-07  Score=52.85  Aligned_cols=56  Identities=25%  Similarity=0.248  Sum_probs=44.1

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||+|+||.||.+.....+..+++|.+.... ........+..|+.++..++|++|++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~   57 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVS   57 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEee
Confidence            689999999999988888899999877421 12223456788999999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.50  E-value=8e-07  Score=51.95  Aligned_cols=63  Identities=27%  Similarity=0.312  Sum_probs=49.5

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+...||.|+||.||++....     .+..+++|.+... ........+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~   72 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVK   72 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchhe
Confidence            468889999999999999987632     4567889987642 23345677899999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.50  E-value=7.9e-07  Score=53.17  Aligned_cols=58  Identities=17%  Similarity=0.180  Sum_probs=46.2

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|..++..+ +||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~   60 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG   60 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCc
Confidence            36899999999999988888899999887532 2234456688899999888 7999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.50  E-value=1.3e-06  Score=54.84  Aligned_cols=62  Identities=15%  Similarity=0.152  Sum_probs=49.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCC-CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT-QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|.+.+.||+|++|.||.+..... +..+++|.+..  ........+..|+.++..++||||++
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~  129 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML--NDERQAAYARSELHCLAACDHFGIVK  129 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            3489999999999999999987555 56778886653  23445567788999999999999974

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.50  E-value=5.6e-07  Score=52.85  Aligned_cols=63  Identities=21%  Similarity=0.236  Sum_probs=48.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCC--------------CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT--------------QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~--------------~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|+||.||.+.....              ...+++|.+... ........+.+|+.++.+++|+|+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            4688999999999999999875322              224788887642 23445667899999999999999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.50  E-value=1e-06  Score=51.27  Aligned_cols=63  Identities=24%  Similarity=0.304  Sum_probs=49.7

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|.+.+.||+|++|.||++....     .+..+++|.+... ........+..|+.++..++|+||++
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~   73 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVR   73 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            568999999999999999998755     5567888877632 23344567889999999999999874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.50  E-value=9.9e-07  Score=50.91  Aligned_cols=62  Identities=24%  Similarity=0.356  Sum_probs=48.4

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC-------HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-------VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.+...||.|.+|.+|.+.....+..+++|.+......       ....+.+..|+.++..++|+||++
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQ   70 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeee
Confidence            56678999999999999988777888999977642111       123467889999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.50  E-value=7.1e-07  Score=52.27  Aligned_cols=63  Identities=19%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCC----------------cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQ----------------QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~----------------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||.+.....+                ..+++|.+... ......+.+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPD-ASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            46889999999999999998764322                34688877632 23356678899999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.50  E-value=8.3e-07  Score=51.56  Aligned_cols=63  Identities=24%  Similarity=0.395  Sum_probs=49.1

Q ss_pred             cceEEeeeecccCceEEEEEEEC----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|...+.||+|.||.||++...    ..+..+++|.+...... .....+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~   70 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVK   70 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChhe
Confidence            35777889999999999999853    23667899987743222 35678999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.50  E-value=6.6e-07  Score=51.55  Aligned_cols=60  Identities=27%  Similarity=0.302  Sum_probs=47.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|.+|.||.+... .+..+++|.+...   ......+.+|+.++..++|+||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~   63 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEG---SMSEDEFIEEAKVMMKLSHEKLVQ   63 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCC---cccHHHHHHHHHHHhcCCCCCeee
Confidence            46888999999999999999764 3445888987632   123456889999999999999874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.50  E-value=9.3e-07  Score=51.33  Aligned_cols=62  Identities=44%  Similarity=0.588  Sum_probs=49.8

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.+.+.||.|.+|.+|++.....+..+++|.+............+..|+.++..++|+++++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   62 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIK   62 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcch
Confidence            45678899999999999998778888999987743323345567888999999999999874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.49  E-value=1.5e-06  Score=52.58  Aligned_cols=56  Identities=25%  Similarity=0.309  Sum_probs=46.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|.||.||++.....+..+++|.....        ....|+.++..++|+||++
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~  121 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIR  121 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcC
Confidence            4699999999999999999998777888999975421        1245888999999999974

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.49  E-value=2.7e-07  Score=53.12  Aligned_cols=60  Identities=23%  Similarity=0.273  Sum_probs=47.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .++|++.+.||+|++|.||++... .+..+++|.+.....   ....+.+|+.++.+++|++++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~   64 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLV   64 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceE
Confidence            357889999999999999999764 555688888764221   235688999999999999986

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.48  E-value=4e-07  Score=53.18  Aligned_cols=62  Identities=18%  Similarity=0.287  Sum_probs=49.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      +|...+.||+|++|.||++.....+..+++|.+.... .......+..|+.++.++. |+||++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~   67 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV-DEKEQKRLLMDLDVVMRSSDCPYIVK   67 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhcc-ChHHHHHHHHHHHHHHHhcCCCCEee
Confidence            4566788999999999999988888899999877422 2245667889999998885 999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.47  E-value=1.2e-06  Score=52.36  Aligned_cols=58  Identities=17%  Similarity=0.179  Sum_probs=46.0

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++.++ +|+||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~   60 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG   60 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCc
Confidence            36899999999999988888899999887532 2334556778888888776 8999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.47  E-value=1.7e-06  Score=50.70  Aligned_cols=62  Identities=21%  Similarity=0.323  Sum_probs=50.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+...||.|.+|.||++.....+..+++|.+...   ......+..|+.++.++ +|+|+++
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~   83 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVK   83 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEE
Confidence            56799999999999999999998778888999987631   22345667888888888 7999863

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.47  E-value=1.6e-06  Score=50.30  Aligned_cols=64  Identities=20%  Similarity=0.321  Sum_probs=49.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|+||.||.+.....     ...+++|.+... ........+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~   73 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN-ASMRERIEFLNEASVMKEFNCHHVVR   73 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc-cCHHHHHHHHHHHHHHHhCCCCceeE
Confidence            35789999999999999999886433     367899987632 23345567889999999999999873

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.47  E-value=9.7e-07  Score=51.55  Aligned_cols=62  Identities=21%  Similarity=0.330  Sum_probs=48.9

Q ss_pred             ceEEeeeecccCceEEEEEEE----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYD----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|++.+.||+|+||.||.+..    ...+..+++|.+... ........+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE-SGGNHIADLKKEIEILRNLYHENIVK   70 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc-ccHHHHHHHHHHHHHHHhCCCCCeee
Confidence            478889999999999999874    245667899987632 23445678999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.46  E-value=1.8e-06  Score=50.25  Aligned_cols=63  Identities=29%  Similarity=0.324  Sum_probs=49.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||+|.||.+|++.....+.    .+++|.+... ........+.+|+.++..++|+|+++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE-TSPKANKEILDEAYVMASVDHPHVVR   73 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCC-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            568899999999999999998644433    4788876642 23455677889999999999999874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.46  E-value=1.6e-06  Score=51.15  Aligned_cols=64  Identities=23%  Similarity=0.258  Sum_probs=48.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|+..+.||+|++|.||++.....+.    .+++|.+... ........+.+|+.++..++|+||++
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~~~~l~h~niv~   73 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDHPHLVR   73 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCccc
Confidence            3468888999999999999998654544    4677876632 22344456889999999999999974

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.46  E-value=1.3e-06  Score=50.46  Aligned_cols=62  Identities=21%  Similarity=0.321  Sum_probs=47.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc----CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ----NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|.+.+.||.|.||.||++.. ..+..+++|.+.....    .......+.+|+.++..++|+|+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   66 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ   66 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            367788999999999999986 4667789998764211    2234467889999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.46  E-value=2.5e-07  Score=58.28  Aligned_cols=67  Identities=16%  Similarity=0.214  Sum_probs=43.9

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCc-EEEEE--------------ecCCc-ccCHHHHHHHHHHHHHHhhCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQ-NVAIK--------------KLSRP-FQNVTHAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-~~~~k--------------~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~   91 (94)
                      .+.++|.+.+.||+|+||.||+|....... ..+.+              .+.+. .........+.+|+.++.+++|+|
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            345789999999999999999986532211 11111              01100 012234556789999999999999


Q ss_pred             CCC
Q psy3070          92 VSH   94 (94)
Q Consensus        92 iv~   94 (94)
                      |++
T Consensus       225 Iv~  227 (501)
T PHA03210        225 ILK  227 (501)
T ss_pred             cCc
Confidence            984

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.45  E-value=1.9e-06  Score=50.86  Aligned_cols=64  Identities=19%  Similarity=0.247  Sum_probs=48.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcE--EEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN--VAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..+|++.+.||.|+||.||++.....+..  +++|.+.. .........+.+|+.++.++ +|+||++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~   72 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIIN   72 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            45789999999999999999987555543  46665542 12334567788999999998 8999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.45  E-value=1.2e-06  Score=50.57  Aligned_cols=60  Identities=23%  Similarity=0.244  Sum_probs=46.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|++|.||++..... ..+++|.+...   ....+.+.+|+.++..+.|+++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~   65 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPG---TMMPEAFLQEAQIMKKLRHDKLVP   65 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccC---CccHHHHHHHHHHHHhCCCCCeee
Confidence            5689999999999999999987443 45888876632   223456788999999999999863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.45  E-value=2e-06  Score=50.40  Aligned_cols=64  Identities=19%  Similarity=0.285  Sum_probs=47.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||+|...     ..+..+++|.+.... .......+..|+.++..++|+||++
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~   73 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVR   73 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeee
Confidence            357899999999999999998643     123468899876322 2234456788999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.45  E-value=1.8e-06  Score=49.91  Aligned_cols=63  Identities=24%  Similarity=0.255  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|...+.||+|++|.||++.....+.   .+++|.+... ......+.+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG-YTEKQRQDFLSEASIMGQFSHHNIIR   70 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCCCeeE
Confidence            467888999999999999998754433   6888877632 23345677899999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.44  E-value=1.1e-06  Score=51.60  Aligned_cols=63  Identities=24%  Similarity=0.275  Sum_probs=47.5

Q ss_pred             cceEEeeeecccCceEEEEEEECC----------------CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA----------------TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~----------------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||.+....                ....+++|.+... ........+..|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            468999999999999999875321                2335788877632 23445678899999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.44  E-value=2.4e-06  Score=49.46  Aligned_cols=63  Identities=17%  Similarity=0.198  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|++|.||++.....   ...+++|..... ......+.+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~   71 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC-TSPSVREKFLQEAYIMRQFDHPHIVK   71 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCchhc
Confidence            4588889999999999999976433   345788876632 23456678899999999999999874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.44  E-value=4.3e-07  Score=52.81  Aligned_cols=62  Identities=21%  Similarity=0.333  Sum_probs=50.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|+..+.||.|.+|.||++.....+..+++|.+... ......+.+..|+.++..++|+||++
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYITR   66 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccc-cchHHHHHHHHHHHHHHcCCCCccHh
Confidence            466778899999999999988777888999987642 22345678899999999999999873

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.44  E-value=1.5e-06  Score=50.03  Aligned_cols=57  Identities=21%  Similarity=0.304  Sum_probs=44.8

Q ss_pred             eecccCceEEEEEEE--CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYD--TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|.||.||++.+  ...+..+++|.+..........+.+..|+.++..++|+||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   60 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVR   60 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcce
Confidence            589999999999864  345667899987643334456778899999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.44  E-value=3.5e-07  Score=52.64  Aligned_cols=61  Identities=23%  Similarity=0.312  Sum_probs=49.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|++|.||.+.... +..+++|.+..  ........+..|+.++..++|+|+++
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~   66 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKS--DDLLKQQDFQKEVQALKRLRHKHLIS   66 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccc--cchhhHHHHHHHHHHHhcCCCcchhh
Confidence            468889999999999999999855 77889998774  23335667889999999999999873

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.44  E-value=7.7e-07  Score=51.78  Aligned_cols=63  Identities=25%  Similarity=0.345  Sum_probs=51.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|+..+.||.|.+|.+|.+.+...+..+++|.+... ........+..|+.++..+.|+|+++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTK   66 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecc-ccHHHHHHHHHHHHHHHhCCCCCEee
Confidence            3577788999999999999998777888999987632 23455678899999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.44  E-value=3.9e-07  Score=52.70  Aligned_cols=62  Identities=21%  Similarity=0.315  Sum_probs=49.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+.|.+.+.||.|.+|.||.+.....+..+++|.+...   ......+..|+.++..+ +|+|+++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~   67 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---GDEEEEIKQEINMLKKYSHHRNIAT   67 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC---CccHHHHHHHHHHHHHhcCCCCeee
Confidence            34578888999999999999998778888999987632   22345678899998888 7999873

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.44  E-value=1.3e-06  Score=50.20  Aligned_cols=60  Identities=23%  Similarity=0.329  Sum_probs=47.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|++|.||++... .+..+++|.+....   .....+..|+.++..++|+++++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQ   63 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeee
Confidence            46888899999999999999774 45678899876422   12346788999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.44  E-value=1.6e-06  Score=51.66  Aligned_cols=62  Identities=21%  Similarity=0.225  Sum_probs=46.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      +|.+.+.||+|+||.||++.....+..+++|.+.... ........+..|..++..+ .|++|+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~   64 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLT   64 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEe
Confidence            4788899999999999999988888899999887432 1223445567777887776 567664

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.44  E-value=1e-06  Score=50.46  Aligned_cols=60  Identities=23%  Similarity=0.345  Sum_probs=50.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|...+.+|.|.+|.+|++.....+..+++|.+...    ...+.+.+|+.+++.++|+|+++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~e~~~~~~l~~~~i~~   62 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSPYIVK   62 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH----HHHHHHHHHHHHHHhCCCCcEee
Confidence            4688889999999999999998777788999987631    22678999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.43  E-value=1.1e-06  Score=52.24  Aligned_cols=63  Identities=32%  Similarity=0.422  Sum_probs=50.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|+||.+|++.....+..+++|.+... .........+..|+.++..++|+|+++
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   89 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIE   89 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEE
Confidence            477888999999999999998777888999987642 223345567889999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.43  E-value=8.2e-07  Score=51.54  Aligned_cols=61  Identities=33%  Similarity=0.491  Sum_probs=49.1

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |...+.||+|.+|.+|.+.....+..+++|.+..........+.+..|+.++..++|++++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~   61 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIV   61 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHH
Confidence            4567889999999999999877888999998875322334456778899999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.43  E-value=2e-06  Score=50.03  Aligned_cols=62  Identities=35%  Similarity=0.508  Sum_probs=46.3

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      |++.+.||.|.+|.+|++.....+..+++|.+............+..|+.++.++   .|+|+++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~   65 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVR   65 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcce
Confidence            5678899999999999999877788999998874322223344566777776655   6999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0577|consensus

Probab=98.43  E-value=4.3e-07  Score=58.25  Aligned_cols=62  Identities=29%  Similarity=0.420  Sum_probs=51.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      -|.-++.||-|+||.||-+.+......|+||.+... ......-++++.|+..|.++.|||++
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnti   89 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTI   89 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcc
Confidence            356678999999999999998788888999988853 33445567889999999999999987

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.43  E-value=1.6e-06  Score=49.78  Aligned_cols=60  Identities=28%  Similarity=0.248  Sum_probs=49.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|++.+.+|.|.+|.||.+...  +..+++|.+...   ....+.+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~   64 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDD---STAAQAFLAEASVMTTLRHPNLVQ   64 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccc---hhHHHHHHHHHHHHHhcCCcceee
Confidence            346888999999999999999863  677899987742   225678899999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.43  E-value=1.8e-06  Score=50.04  Aligned_cols=63  Identities=24%  Similarity=0.371  Sum_probs=48.6

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|+....||.|+||.||.+....     ....+++|.+... ......+.+..|+.++.+++|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   72 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT-KDENLQSEFRRELDMFRKLSHKNVVR   72 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc-cchHHHHHHHHHHHHHHhcCCcceee
Confidence            568889999999999999998532     2346788876631 22235678999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.42  E-value=1.9e-06  Score=50.43  Aligned_cols=62  Identities=29%  Similarity=0.336  Sum_probs=46.3

Q ss_pred             ceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|++.+.||.|.||.||++.....     ...+++|.+... ........+.+|+.++..++|+||++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   67 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIK   67 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEee
Confidence            367788999999999999875321     235777776632 23345677899999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.41  E-value=2.6e-06  Score=49.88  Aligned_cols=62  Identities=24%  Similarity=0.242  Sum_probs=48.3

Q ss_pred             cceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.+|+|+||.||.+...     ..+..+++|.+..  ........+..|+.++.+++|+++++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVK   71 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCC--cCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            46888999999999999998742     2334578887763  33455678899999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.41  E-value=6.8e-07  Score=53.69  Aligned_cols=63  Identities=30%  Similarity=0.385  Sum_probs=48.0

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|++.+.||.|+||.||++....     .+..+++|.+... ......+.+..|+.++.++ +|+||++
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~~~~l~~h~niv~   75 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG-ATASEYKALMTELKILIHIGHHLNVVN   75 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCC-CCHHHHHHHHHHHHHHHhhccCcchhh
Confidence            468999999999999999986422     2357899987742 2334556788899999998 8999873

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.41  E-value=3.3e-06  Score=49.19  Aligned_cols=63  Identities=27%  Similarity=0.238  Sum_probs=48.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..+|...+.||.|++|.||++.....+.    .+++|.+... ........+..|+.++..+.|+|++
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~   72 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVC   72 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCc
Confidence            4568899999999999999998644444    4788887632 2334566788999999999999986

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.41  E-value=1.5e-06  Score=50.68  Aligned_cols=61  Identities=21%  Similarity=0.314  Sum_probs=49.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      .+.|.+.+.+|.|.||.||.+.....+..+++|.+..   .......+..|+.++.++ +|+|++
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~---~~~~~~~~~~e~~~l~~~~~h~~i~   76 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV---TEDEEEEIKLEINMLKKYSHHRNIA   76 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec---ChHHHHHHHHHHHHHHHhcCCCcEE
Confidence            4678889999999999999999888888899998763   233455678888888887 799986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.41  E-value=1e-06  Score=52.21  Aligned_cols=54  Identities=26%  Similarity=0.350  Sum_probs=42.0

Q ss_pred             eeecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..||+|+||.||++...  ..+..+++|.+....    ....+.+|+.++.+++|+||++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~   62 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVIS   62 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcc
Confidence            57999999999999864  345678999876321    2234678999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.41  E-value=8.8e-07  Score=51.45  Aligned_cols=63  Identities=24%  Similarity=0.248  Sum_probs=48.9

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|++|.||++....     ....+++|.+... ......+.+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~   72 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET-ASNDARKDFEREAELLTNFQHENIVK   72 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc-CCHHHHHHHHHHHHHHHhcCCCCchh
Confidence            468888999999999999987532     2457889987642 23335678999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.40  E-value=1.4e-06  Score=50.83  Aligned_cols=61  Identities=23%  Similarity=0.348  Sum_probs=46.6

Q ss_pred             eEEeeeecccCceEEEEEEE----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYD----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |+..+.||.|+||.||.+..    ...+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   70 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE-CGQQNTSGWKKEINILKTLYHENIVK   70 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccc-cChHHHHHHHHHHHHHHhCCCCCEee
Confidence            38889999999999987542    245667899987742 22335567889999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.40  E-value=2.5e-06  Score=50.23  Aligned_cols=63  Identities=24%  Similarity=0.274  Sum_probs=47.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc--EEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ--NVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|.+.+.||.|+||.||++.....+.  .+++|.+.. .......+.+..|+.++.++ +|+||++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~   67 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIIN   67 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhh
Confidence            468899999999999999998755543  356776552 12334567789999999998 7999873

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.40  E-value=1.4e-06  Score=52.01  Aligned_cols=58  Identities=22%  Similarity=0.301  Sum_probs=44.0

Q ss_pred             eeecccCceEEEEEEEC---CCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++...   ..+..+++|.+....  ........+..|+.++..++|+||++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   64 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVD   64 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhc
Confidence            57899999999998753   356789999877421  12234456788999999999999974

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.40  E-value=3.2e-06  Score=50.22  Aligned_cols=63  Identities=29%  Similarity=0.380  Sum_probs=50.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|.....+|.|.+|.||++.....+..+++|.+... .........+..|+.++..++|+|+++
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   85 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIE   85 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCcc
Confidence            366667899999999999998778888999987642 223345567889999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.40  E-value=3.4e-06  Score=47.96  Aligned_cols=60  Identities=27%  Similarity=0.395  Sum_probs=50.1

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +|...+.||+|.+|.+|++.....+..+++|.+...  .......+.+|+.++..++|++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~   60 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE--SKEKKEKIINEIQILKKCKHPNIV   60 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEeccc--chhHHHHHHHHHHHHHhCCCCCEe
Confidence            477889999999999999998777888999988742  224667889999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.40  E-value=2.3e-06  Score=51.09  Aligned_cols=62  Identities=21%  Similarity=0.239  Sum_probs=46.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCC-CCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNH-KNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~-~~iv   93 (94)
                      +|...+.||+|+||.||++....++..+++|.+.... ........+..|..++..+.| ++|+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~   64 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLT   64 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchh
Confidence            3677889999999999999988888899999887421 122345667788888887754 5553

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG2052|consensus

Probab=98.40  E-value=4.4e-07  Score=55.99  Aligned_cols=57  Identities=23%  Similarity=0.313  Sum_probs=44.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh--CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL--VNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~--l~~~~iv   93 (94)
                      .....+.+++|+|.||+||+|.++  |..+|+|++..     .+...|-+|.+++..  ++|+||+
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENIL  268 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENIL  268 (513)
T ss_pred             hheeEEEEEecCccccceeecccc--CCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhh
Confidence            356788899999999999999984  56799998773     234556677777765  5999986

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.40  E-value=2.1e-06  Score=50.12  Aligned_cols=63  Identities=21%  Similarity=0.227  Sum_probs=47.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||.|+||.||++.....+.    .+++|.+.. .........+..|+..+..++|+||++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~~~~~l~~l~h~~iv~   73 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD-RSGRQTFQEITDHMLAMGSLDHAYIVR   73 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccc-ccchHHHHHHHHHHHHHhcCCCCCcce
Confidence            468888999999999999998755544    366776652 122344567788888889999999974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.39  E-value=1.8e-06  Score=51.43  Aligned_cols=58  Identities=24%  Similarity=0.230  Sum_probs=42.9

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHH-HHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFK-LMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~-~l~~l~~~~iv~   94 (94)
                      +.||.|+||.||++.....+..+++|.+.... ........+..|.. ++..++|+||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~   60 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG   60 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccc
Confidence            36899999999999998888899999887421 12233445556654 567789999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.38  E-value=1.2e-06  Score=51.11  Aligned_cols=55  Identities=29%  Similarity=0.318  Sum_probs=42.5

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ||+|+||.||++.....+..+++|.+..... .......+..|+.++..++|+||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~   56 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIV   56 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEE
Confidence            6899999999999878888999998764211 112334556799999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.38  E-value=3e-06  Score=49.31  Aligned_cols=64  Identities=20%  Similarity=0.300  Sum_probs=48.8

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||.+...     ..+..+++|.+... ........+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   73 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVR   73 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            356899999999999999998753     22456888877632 23345567889999999999999873

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.38  E-value=3.3e-06  Score=49.92  Aligned_cols=63  Identities=27%  Similarity=0.374  Sum_probs=48.5

Q ss_pred             cceEEeeeecccCceEEEEEEE-----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+|.+.+.||+|+||.||.+..     ...+..+++|.+... ......+.+..|+.++.++ +|+||++
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~  103 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPT-AHSSEREALMSELKIMSHLGNHENIVN  103 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCcc-CChHHHHHHHHHHHHHHhccCCCCcce
Confidence            4689999999999999999864     223446888877642 2334567889999999999 8999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.37  E-value=7.7e-07  Score=51.86  Aligned_cols=63  Identities=19%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|+||.||++....     .+..+++|.+... ........+..|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~   72 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK-AEGPLREEFKHEAMMRSRLQHPNIVC   72 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            357778899999999999997633     2456899987742 22334567889999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.37  E-value=2.4e-06  Score=50.95  Aligned_cols=58  Identities=29%  Similarity=0.272  Sum_probs=42.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHH-HHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFK-LMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~-~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|.. ++..++|+||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~   60 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG   60 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCC
Confidence            36899999999999998888999999887421 12233455566655 456789999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.37  E-value=3.5e-06  Score=49.37  Aligned_cols=63  Identities=30%  Similarity=0.421  Sum_probs=48.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|++.+.||+|.+|.||++.....     ...+++|.+... ........+.+|+.++.++ +|+||++
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~   80 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIIN   80 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            5689999999999999999876433     256888987742 2334556788999999999 7999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.36  E-value=3.9e-06  Score=50.08  Aligned_cols=57  Identities=25%  Similarity=0.212  Sum_probs=45.7

Q ss_pred             eeccc--CceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSG--AQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|  +++.||.+.+...+..+++|.+..........+.+..|+.++..++|+||++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~   63 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMT   63 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            45665  8899999998888999999987753334455678889999998899999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.36  E-value=2.3e-06  Score=50.94  Aligned_cols=58  Identities=24%  Similarity=0.272  Sum_probs=44.6

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|..++..+ +|++|++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~   60 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA   60 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccc
Confidence            36899999999999988888899999887431 1234456677888888766 7999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.36  E-value=4.3e-06  Score=47.82  Aligned_cols=56  Identities=20%  Similarity=0.236  Sum_probs=44.0

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||.|++|.||++.. ..+..+++|.+... ........+.+|+.++..++|+|+++
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   56 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKED-LPQELKIKFLSEARILKQYDHPNIVK   56 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            3689999999999986 45778899987642 23344567889999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.36  E-value=2.2e-06  Score=51.05  Aligned_cols=58  Identities=22%  Similarity=0.269  Sum_probs=44.9

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||.|+||.||++.....+..+++|.+.... ........+..|..++..+ +|+||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~   60 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ   60 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccc
Confidence            36899999999999988888899999887431 1223456677888888877 7999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.35  E-value=2.7e-06  Score=48.97  Aligned_cols=57  Identities=25%  Similarity=0.310  Sum_probs=43.8

Q ss_pred             eeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||+|......   ..+++|.+.... .....+.+..|+.++..++|+|+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~   60 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH-IAAGKKEFLREASVMAQLDHPCIVR   60 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCeee
Confidence            36899999999999764443   578999877432 2245667899999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG4278|consensus

Probab=98.35  E-value=7.9e-07  Score=57.52  Aligned_cols=71  Identities=20%  Similarity=0.268  Sum_probs=57.3

Q ss_pred             eecCeeeeee-cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          21 EVGDTKFTIL-KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        21 ~~~~~~~~~~-~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+..+.|+.. .++.....||-|.+|.||.|.++.....+++|.+.   .+......|+.|+.+|..+.|||+|+
T Consensus       256 SPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK---EDtMeveEFLkEAAvMKeikHpNLVq  327 (1157)
T KOG4278|consen  256 SPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ  327 (1157)
T ss_pred             cCCcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh---hcchhHHHHHHHHHHHHhhcCccHHH
Confidence            3334555543 24566789999999999999998888889999877   45668899999999999999999974

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.35  E-value=4e-06  Score=50.12  Aligned_cols=63  Identities=22%  Similarity=0.277  Sum_probs=47.4

Q ss_pred             ceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +|.+.+.||+|+||.||++...   ..+..+++|.+....  ........+..|+.++..+ +|++|++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~   69 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVT   69 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCccc
Confidence            4788999999999999988753   356789999876421  1223456678899999998 5888863

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1151|consensus

Probab=98.35  E-value=2.9e-08  Score=61.57  Aligned_cols=66  Identities=27%  Similarity=0.351  Sum_probs=54.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH-----HHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV-----THAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|-++.+||+|+|+.||++.+.....++++|+-+.+..++     .+.+..++|.++...|+||.||+
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVK  531 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVK  531 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeee
Confidence            4567888899999999999999987788899999866544443     35677899999999999999985

>KOG0690|consensus

Probab=98.35  E-value=8e-07  Score=53.49  Aligned_cols=63  Identities=22%  Similarity=0.299  Sum_probs=55.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      .++|..+++||+|.||.|.+|+.+.++..+++|++.+.. ....+...-+.|-++|....||.+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFL  230 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFL  230 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHH
Confidence            567899999999999999999988999999999998753 466788888999999999999975

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.35  E-value=5.1e-06  Score=50.90  Aligned_cols=58  Identities=21%  Similarity=0.401  Sum_probs=44.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||.|.+|.||++...  ..+..+++|.+...       ....+|+.++..++|+||++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~  150 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIIN  150 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccc
Confidence            346999999999999999998753  23456788876631       23457999999999999974

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.34  E-value=2.9e-06  Score=50.65  Aligned_cols=58  Identities=28%  Similarity=0.276  Sum_probs=42.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHH-HhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKL-MKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~-l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|..+ +..++|+||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~   60 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG   60 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCcc
Confidence            36899999999999988888899999887431 122344556666654 56689999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0588|consensus

Probab=98.34  E-value=4.5e-07  Score=58.34  Aligned_cols=64  Identities=30%  Similarity=0.361  Sum_probs=55.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+-|++.+.||.|+.|.|..+.+..+|+..|+|++.+. .........+.+|+.+|+.+.|||++
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl   75 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVL   75 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCee
Confidence            45689999999999999999999999999999999864 23344567889999999999999986

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.33  E-value=2.9e-06  Score=50.51  Aligned_cols=58  Identities=26%  Similarity=0.310  Sum_probs=42.7

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ......+.+..|..++..+ +|+||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~   60 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH   60 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccc
Confidence            36899999999999988888899999887432 1223445556677776654 8999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0574|consensus

Probab=98.33  E-value=4.3e-08  Score=58.23  Aligned_cols=60  Identities=23%  Similarity=0.333  Sum_probs=53.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|.+++.||+|++|.|+++.++.+|..+++|.+.    .....+.+..|+.+|.+..++++|+
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VP----V~sDLQEIIKEISIMQQC~S~yVVK   92 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVP----VDTDLQEIIKEISIMQQCKSKYVVK   92 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecC----ccchHHHHHHHHHHHHHcCCchhhh
Confidence            45788999999999999999998999999999766    3457899999999999999999874

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.32  E-value=4.5e-06  Score=48.50  Aligned_cols=61  Identities=26%  Similarity=0.384  Sum_probs=45.7

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      |.+.+.+|.|.+|.+|++.....+..+++|.+....... .......|+.++.++ .|+|+++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~   62 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILR   62 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccc
Confidence            567889999999999999987788889999876432222 223345788888888 5999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.32  E-value=4.3e-06  Score=48.80  Aligned_cols=62  Identities=23%  Similarity=0.263  Sum_probs=48.0

Q ss_pred             cceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|...+.||+|+||.||.+...     ..+..+++|.+..  ........+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHIVR   71 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc--CCHHHHHHHHHHHHHHhcCCCCCCce
Confidence            46788899999999999998632     2345677887663  34456678999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.32  E-value=2.1e-06  Score=51.27  Aligned_cols=66  Identities=35%  Similarity=0.398  Sum_probs=48.7

Q ss_pred             eecceE-EeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH------H------HHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQ-NLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV------T------HAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~-~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------~------~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|. +.+.||.|.+|.||++.....+..+++|.+.......      +      ....+.+|+.++..++|+|+++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG   84 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence            455665 4578999999999999987788899999876421111      0      0125778999999999999873

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.32  E-value=1.1e-06  Score=50.54  Aligned_cols=60  Identities=27%  Similarity=0.292  Sum_probs=46.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|.+|.||++... ....+++|.+....   .....+..|+.++..++|+||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQ   63 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEE
Confidence            35788899999999999999874 45578889876321   12345778999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG1025|consensus

Probab=98.32  E-value=1.6e-06  Score=57.36  Aligned_cols=61  Identities=28%  Similarity=0.254  Sum_probs=47.0

Q ss_pred             eEEeeeecccCceEEEEEEECCCC----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQ----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+..++||.|+||.||+|.+-..+    .+|++|.+.. ....+....++.|+-+|.+++|+|+++
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~R  762 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLR  762 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHH
Confidence            345679999999999998764333    3578888774 234456778999999999999999874

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.31  E-value=2.6e-06  Score=49.49  Aligned_cols=61  Identities=28%  Similarity=0.350  Sum_probs=48.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC---CCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN---HKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~iv   93 (94)
                      .|+..+.||.|.+|.+|++.+...+..+++|.+... ........+.+|+.++..+.   |+|++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~vi   65 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLD-TPDDDVSDIQREVALLSQLRQSQPPNIT   65 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCC-CCchhHHHHHHHHHHHHHhccCCCCCee
Confidence            467788999999999999998778889999987642 22345567888999888885   89886

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.31  E-value=3.1e-06  Score=50.43  Aligned_cols=58  Identities=28%  Similarity=0.298  Sum_probs=43.4

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+..... ..........|..++..+ +||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~   60 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH   60 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcc
Confidence            368999999999999888888999998874311 123345566777777764 8999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.31  E-value=4.4e-06  Score=47.84  Aligned_cols=60  Identities=25%  Similarity=0.330  Sum_probs=47.3

Q ss_pred             EEeeeecccCceEEEEEEECCCC----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQ----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.||.|.||.||.+.....+    ..+++|.+... ......+.+..|+.++..++|+|+++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~   65 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKED-ADEQQIEEFLREARIMRKLDHPNIVK   65 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCC-CChHHHHHHHHHHHHHHhcCCCchhe
Confidence            45678999999999999876544    77899987642 22236778899999999999999873

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.31  E-value=2.8e-06  Score=50.63  Aligned_cols=58  Identities=21%  Similarity=0.280  Sum_probs=44.4

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|..++..+ +|+||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~   60 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ   60 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhc
Confidence            36899999999999988888899999887421 1223456677888888776 7999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.30  E-value=3.1e-06  Score=49.29  Aligned_cols=56  Identities=29%  Similarity=0.338  Sum_probs=43.8

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||.|.||.||.+.....+..+++|.+..... .......+..|+.++..++|+++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   57 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVS   57 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEee
Confidence            5899999999998877888999998774221 2234556678999999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0666|consensus

Probab=98.30  E-value=2.9e-07  Score=54.93  Aligned_cols=67  Identities=30%  Similarity=0.373  Sum_probs=49.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCC----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQ----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +....|.....||+|.+|.||++....+.    ..+|+|.+.............++|+.+++.++|+|+++
T Consensus        21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~   91 (438)
T KOG0666|consen   21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVIS   91 (438)
T ss_pred             HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchh
Confidence            34567899999999999999998532222    25677776643223345567899999999999999974

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.29  E-value=2.6e-06  Score=48.92  Aligned_cols=58  Identities=28%  Similarity=0.313  Sum_probs=46.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|+||.||.+..  .+..+++|.+...    .....+..|+.++..++|+|+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~   63 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVR   63 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCe
Confidence            5689999999999999999864  5667899987631    23467889999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG4279|consensus

Probab=98.29  E-value=6e-07  Score=58.64  Aligned_cols=56  Identities=30%  Similarity=0.434  Sum_probs=49.4

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      -+||+|.+|.||.+++..+...+++|.+.-  ......+-+..|+.+.+.++|.|||+
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpe--kdsr~~QPLhEEIaLH~~LrHkNIVr  636 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPE--KDSREVQPLHEEIALHSTLRHKNIVR  636 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccc--ccchhhccHHHHHHHHHHHhhHhHHH
Confidence            489999999999999988888999999883  45567888999999999999999974

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.29  E-value=6e-06  Score=49.42  Aligned_cols=67  Identities=27%  Similarity=0.390  Sum_probs=49.3

Q ss_pred             eeee-cceEEeeeecccCceEEEEEEECCC-------CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          27 FTIL-KRYQNLKPIGSGAQGIVCAAYDTAT-------QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        27 ~~~~-~~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      |++. .+|.+.+.||+|+||.||.+.....       ...+++|.+... ......+.+..|+.++.++ .|+||++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~   82 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIIN   82 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            4443 3689999999999999999875321       225788876632 2334567889999999999 8999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.29  E-value=3.8e-06  Score=49.73  Aligned_cols=63  Identities=29%  Similarity=0.407  Sum_probs=50.2

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||.|.+|.+|++.....+..+++|.+... .........+..|+.+++.++|+|+++
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   79 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ   79 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCccc
Confidence            477778999999999999998777888999987632 223345567889999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.29  E-value=3.5e-06  Score=48.25  Aligned_cols=55  Identities=22%  Similarity=0.317  Sum_probs=44.6

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +.||.|.+|.||.+.... +..+++|.+.... .......+..|+.++..++|+||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~   55 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTL-PPDLKRKFLQEAEILKQYDHPNIV   55 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeE
Confidence            368999999999998855 8889999877432 224567889999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.27  E-value=5.9e-06  Score=47.61  Aligned_cols=56  Identities=16%  Similarity=0.265  Sum_probs=45.4

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||.|.+|.+|.+.....+..+++|.+.... ......+.+..|+.++..++|+||++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   57 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVK   57 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEee
Confidence            689999999999987778889999887432 23345678899999999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.27  E-value=4.1e-06  Score=48.10  Aligned_cols=57  Identities=23%  Similarity=0.271  Sum_probs=44.0

Q ss_pred             eeecccCceEEEEEEECC-CC--cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTA-TQ--QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~-~~--~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|++|.||++.+.. .+  ..+++|.+...... ...+.+..|+.++.+++|+||++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~   60 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIR   60 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccc
Confidence            368999999999998643 22  25889988753222 56788999999999999999974

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.27  E-value=7.4e-06  Score=47.68  Aligned_cols=61  Identities=33%  Similarity=0.476  Sum_probs=46.4

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      |.+.+.||.|.+|.||+|.....+..+++|.+...... .......+|+..+.++. |+|+++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~   62 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVK   62 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchh
Confidence            56778999999999999998777888999987642211 22334457888899998 999863

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.26  E-value=3.5e-06  Score=49.85  Aligned_cols=54  Identities=26%  Similarity=0.344  Sum_probs=41.4

Q ss_pred             eeecccCceEEEEEEECC--CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTA--TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..||.|+||.||++....  .+..+++|.+....    ....+.+|+.++..++|+||++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~   62 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIA   62 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeee
Confidence            579999999999998643  44678889776321    2235678999999999999873

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0592|consensus

Probab=98.26  E-value=4.2e-07  Score=57.19  Aligned_cols=65  Identities=23%  Similarity=0.298  Sum_probs=52.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..+|...+.||.|+|+.|+++....++..+|+|++.+... .....+-+..|-.+|.+| .||.|++
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivk  138 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVK  138 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEE
Confidence            5689999999999999999999988999999999886432 223344567788889888 8998874

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.25  E-value=5.9e-06  Score=47.52  Aligned_cols=58  Identities=26%  Similarity=0.300  Sum_probs=46.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||+|.+|.+|++...  +..+++|.+..    ....+.+..|+.++..++|+++++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKN----DATAQAFLAEASVMTQLRHSNLVQ   63 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCC----CchHHHHHHHHHHHHhCCCCCeee
Confidence            46889999999999999998763  56688887663    223567889999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.25  E-value=4.9e-06  Score=49.76  Aligned_cols=57  Identities=14%  Similarity=0.139  Sum_probs=45.2

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|+.++.++ .|++|+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   59 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLV   59 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEe
Confidence            36899999999999988888899999887532 2234566788899988887 689886

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.25  E-value=4.2e-06  Score=48.91  Aligned_cols=63  Identities=37%  Similarity=0.434  Sum_probs=51.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....|.....+|.|.+|.+|.+.+...+..+++|.+....   .....+..|+.++..++|+|+++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~   79 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK---QNKELIINEILIMKDCKHPNIVD   79 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCc---hhHHHHHHHHHHHHHCCCCCeeE
Confidence            3456888899999999999999987778889999877421   25667889999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.25  E-value=8.9e-06  Score=47.66  Aligned_cols=61  Identities=31%  Similarity=0.522  Sum_probs=48.5

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|.....||.|.+|.+|++.....+..+++|.+..  ......+.+.+|+.++..++|+|+++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~--~~~~~~~~~~~e~~~l~~~~h~~vv~   80 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDL--RKQQRRELLFNEVVIMRDYQHPNIVE   80 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEec--cchhHHHHHHHHHHHHHHcCCCChhe
Confidence            45556799999999999998877788899997763  23344566889999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.24  E-value=9.5e-06  Score=47.97  Aligned_cols=64  Identities=28%  Similarity=0.381  Sum_probs=48.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-------CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-------TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||.+....       ....+++|.+... ........+..|+.++..+ +|+||++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~   88 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIIN   88 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEee
Confidence            4679999999999999999987532       1235888887742 2234456788899999998 7999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.23  E-value=2.5e-06  Score=50.32  Aligned_cols=62  Identities=27%  Similarity=0.453  Sum_probs=48.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|.....||.|.||.+|++.....+..+++|.+...  .......+.+|+.++..++|+|+++
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~   82 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHQNVVE   82 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEec--ccchHHHHHHHHHHHHhCCCCchhh
Confidence            3455556899999999999988778889999987642  2234566888999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.23  E-value=2.8e-06  Score=50.01  Aligned_cols=62  Identities=29%  Similarity=0.482  Sum_probs=49.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+.|.....||.|.+|.||++.....+..+++|.+..  ........+.+|+.++..++|+|++
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~e~~~l~~l~h~~ii   82 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDL--RKQQRRELLFNEVVIMRDYHHENVV   82 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEec--chHHHHHHHHHHHHHHHhCCCCcHH
Confidence            3455666789999999999998877788899998763  2334556788999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.23  E-value=8.1e-06  Score=48.17  Aligned_cols=64  Identities=27%  Similarity=0.366  Sum_probs=48.1

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-------CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-------ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||.+...       ..+..+++|.+... ........+.+|+.++..+ +|+||++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~   85 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIIN   85 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchh
Confidence            456899999999999999988642       12336788877632 2334567889999999998 8999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA02988 hypothetical protein; Provisional

Probab=98.23  E-value=8.7e-06  Score=47.78  Aligned_cols=56  Identities=13%  Similarity=0.156  Sum_probs=44.7

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+++|.++.||+|..  .+..+++|.+..... .....+.+.+|+.+|.+++|+||++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~   82 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILK   82 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            5789999999999987  567899998875322 2233577889999999999999974

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.23  E-value=8.6e-06  Score=46.61  Aligned_cols=57  Identities=30%  Similarity=0.378  Sum_probs=44.9

Q ss_pred             eeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|.||.||.+.....   +..+++|.+...... .....+..|+.++..++|+++++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~   60 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE-EERKDFLKEARVMKKLGHPNVVR   60 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccch-hHHHHHHHHHHHHhhcCCCChhe
Confidence            3689999999999987654   778899987743222 24678899999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.22  E-value=1.1e-05  Score=47.40  Aligned_cols=64  Identities=25%  Similarity=0.320  Sum_probs=49.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||.|.+|.+|++.....+..+++|.+... ........+..|+.++... .|+||++
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~   78 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRT-GNKEENKRILMDLDVVLKSHDCPYIVK   78 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEecc-CChHHHHHHHHHHHHHHhccCCCchHh
Confidence            46789999999999999999998777888999987742 2223455667787776666 5998863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.22  E-value=8.1e-06  Score=48.74  Aligned_cols=58  Identities=29%  Similarity=0.292  Sum_probs=41.3

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHH-HHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFK-LMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~-~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+.... ........+..|.. ++..++|+||++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~   60 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG   60 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCc
Confidence            36899999999999988888889999887421 11223344455554 466789999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.22  E-value=7.6e-06  Score=46.97  Aligned_cols=56  Identities=21%  Similarity=0.211  Sum_probs=44.9

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||.|.+|.+|.+.....+..+++|.+..... .......+..|+.++.+++|+|+++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   57 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVK   57 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhH
Confidence            5889999999999877788999998874321 2345677899999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.21  E-value=1.2e-05  Score=47.22  Aligned_cols=62  Identities=24%  Similarity=0.278  Sum_probs=47.2

Q ss_pred             cceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||.|++|.+|.+....     ....+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVK   71 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcce
Confidence            468889999999999999987422     234567777652  33445577899999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.21  E-value=9e-06  Score=47.12  Aligned_cols=56  Identities=23%  Similarity=0.252  Sum_probs=41.8

Q ss_pred             eecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|+||.||++...  .....+++|.+.... .......+..|+.++..++|+||++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~   59 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQ   59 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEee
Confidence            5899999999999753  234467888776422 2334457888999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.21  E-value=6.9e-06  Score=47.29  Aligned_cols=62  Identities=23%  Similarity=0.297  Sum_probs=43.7

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCC---cccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR---PFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +|.+.+.||.|++|.||++.....+....++.+..   ..........+..|+.++..++|||++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~   65 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIV   65 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHH
Confidence            47888999999999999998765554444444332   111223445567788999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.21  E-value=7.1e-06  Score=48.86  Aligned_cols=58  Identities=21%  Similarity=0.239  Sum_probs=43.5

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.||+|+||.||++.....+..+++|.+..... ..........|..++..+ +|++|++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~   60 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH   60 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccC
Confidence            368999999999999988888999998874211 123445667777777764 8999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.21  E-value=1.3e-05  Score=47.63  Aligned_cols=63  Identities=32%  Similarity=0.391  Sum_probs=47.7

Q ss_pred             cceEEeeeecccCceEEEEEEEC-------CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDT-------ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|.+.+.||+|++|.||++...       .....+++|.+... ........+..|+.++..+ +|+||++
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~   82 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN-ATDKDLADLISEMELMKLIGKHKNIIN   82 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCCeee
Confidence            57899999999999999998642       12345788877632 2344567788999999998 6999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.20  E-value=1e-05  Score=46.55  Aligned_cols=57  Identities=26%  Similarity=0.339  Sum_probs=42.9

Q ss_pred             eeecccCceEEEEEEECC---CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++....   ....+++|.+.. .........+..|+.+++.++|+|+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~   60 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR-ITDLEEVEQFLKEGIIMKDFSHPNVLS   60 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCc-cCCHHHHHHHHHHHHHHccCCCCCcce
Confidence            368999999999987532   234688897753 223455678889999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1152|consensus

Probab=98.19  E-value=1.4e-06  Score=55.61  Aligned_cols=65  Identities=25%  Similarity=0.382  Sum_probs=50.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc------CHHHHHHHHHHHHHHhhCC---CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ------NVTHAKRAYREFKLMKLVN---HKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~---~~~iv~   94 (94)
                      .++|.....+|.|+||.|+.|.++...-.|++|.+.+.+.      ..........|+.+|..+.   |+||++
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK  633 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILK  633 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence            4568999999999999999999876666788998876421      1123345678999999985   999975

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.19  E-value=9.4e-06  Score=46.86  Aligned_cols=56  Identities=25%  Similarity=0.318  Sum_probs=42.5

Q ss_pred             eecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|.||.||.+...  ..+..+++|.+... ......+.+.+|+.++..++|+||++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~   59 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQLDNPYIVR   59 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc-cChHHHHHHHHHHHHHHhcCCCCeEE
Confidence            3799999999998753  33446888987642 23445677899999999999999873

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.19  E-value=1.1e-05  Score=47.56  Aligned_cols=60  Identities=30%  Similarity=0.482  Sum_probs=47.7

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.....||+|++|.||++.....+..+++|.+..  ........+.+|+.++..++|+|+++
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~   81 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRDYQHENVVE   81 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecc--cchhHHHHHHHHHHHHHhcCCcchhh
Confidence            3344678999999999998877888899998763  23345667899999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.17  E-value=2.6e-05  Score=43.68  Aligned_cols=60  Identities=32%  Similarity=0.445  Sum_probs=48.3

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |.+...+|.|.++.+|++.....+..+++|.+...... ...+.+..|+..+..++|++++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~   60 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIV   60 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChh
Confidence            45678899999999999998766788999988742211 2567889999999999999876

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0584|consensus

Probab=98.16  E-value=8.1e-07  Score=56.57  Aligned_cols=61  Identities=26%  Similarity=0.340  Sum_probs=48.2

Q ss_pred             EEeeeecccCceEEEEEEECCCCcEEEEEecCCc--ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP--FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +...+||+|+|-.||++.+...|..+|.-.+...  .......++|..|+.+|..|.|+||++
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIir  105 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIR  105 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceee
Confidence            4558999999999999999777777765443321  234567799999999999999999984

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.16  E-value=1.7e-05  Score=45.95  Aligned_cols=56  Identities=23%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             eecccCceEEEEEEECC--CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTA--TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|+||.||+|....  ....+++|.+... ........+.+|+.++..++|+||++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~   59 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQ   59 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcce
Confidence            58999999999986422  2345778876532 23345567889999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG4257|consensus

Probab=98.15  E-value=4.6e-06  Score=54.04  Aligned_cols=61  Identities=20%  Similarity=0.237  Sum_probs=46.4

Q ss_pred             eEEeeeecccCceEEEEEEECCC--Cc--EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTAT--QQ--NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~--~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.++||.|.||.||.|.+...  +.  -+|+|..... ......+.|++|..+|+.++||||++
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIik  455 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIK  455 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhh
Confidence            34557999999999999986433  22  3677765532 34456899999999999999999985

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.15  E-value=3.9e-06  Score=56.49  Aligned_cols=57  Identities=14%  Similarity=0.173  Sum_probs=43.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.....+|+|+||.||+|.....+..+++|.+.....      ....|+..+.+++|||||+
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~  747 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVK  747 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcce
Confidence            45566789999999999999877888999998763211      1123577889999999984

>KOG0579|consensus

Probab=98.14  E-value=9.1e-08  Score=61.76  Aligned_cols=62  Identities=18%  Similarity=0.272  Sum_probs=51.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|.++..||.|+||.||++..+.++...+.|.|..  .......+++-|+++|..++||+||+
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivk   93 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVK   93 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHH
Confidence            446788899999999999998877777777787773  45678899999999999999999873

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.14  E-value=1.4e-05  Score=45.68  Aligned_cols=55  Identities=20%  Similarity=0.258  Sum_probs=44.5

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ||.|.+|.+|.+.....+..+++|.+.... ........+..|+.++..++|+|++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~   56 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV   56 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHH
Confidence            689999999999987778889999877532 2234567889999999999999986

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.14  E-value=8.8e-06  Score=46.69  Aligned_cols=55  Identities=16%  Similarity=0.247  Sum_probs=40.5

Q ss_pred             eeecccCceEEEEEEECCCC----------cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQ----------QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~----------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||++.....+          ..+++|.+..   .......+.+|+.+++.++|+|+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~   65 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS---DHRDSLAFFETASLMSQLSHKHLVK   65 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeecccc---chhhHHHHHHHHHHHHcCCCcchhh
Confidence            36899999999999875444          2356665552   1122678889999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.14  E-value=1.9e-05  Score=46.21  Aligned_cols=63  Identities=19%  Similarity=0.276  Sum_probs=47.3

Q ss_pred             ceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +|++.+.||.|++|.+|.+...   ..+..+++|.+....  ......+.+..|+.++..+ +|++|++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~   69 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT   69 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhc
Confidence            3778899999999999998763   356789999876421  1223456778899999998 6898863

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.09  E-value=1.7e-05  Score=45.94  Aligned_cols=63  Identities=24%  Similarity=0.324  Sum_probs=46.5

Q ss_pred             ceEEeeeecccCceEEEEEEECC-CCcEEEEEecCCcc--------cCHHHHHHHHHHHHHHhh-CCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTA-TQQNVAIKKLSRPF--------QNVTHAKRAYREFKLMKL-VNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~--------~~~~~~~~~~~e~~~l~~-l~~~~iv~   94 (94)
                      +|.+.+.||.|.+|.+|.+.... .+..+++|.+....        ........+..|+.++.+ ++|+|+++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~   73 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVR   73 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeee
Confidence            36778899999999999999765 56788888765311        122345667788888765 69999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.08  E-value=8.3e-06  Score=47.58  Aligned_cols=55  Identities=18%  Similarity=0.236  Sum_probs=39.0

Q ss_pred             eecccCceEEEEEEECCC------------------------CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTAT------------------------QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~------------------------~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .||+|+||.||+|.....                        ...+++|.+..  ........+..|+.++..++|+||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDP--SHRDIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecCh--HHHHHHHHHHHHHHHHhcCCCCCee
Confidence            689999999998863211                        12467777653  2233456788888999999999987


Q ss_pred             C
Q psy3070          94 H   94 (94)
Q Consensus        94 ~   94 (94)
                      +
T Consensus        80 ~   80 (274)
T cd05076          80 F   80 (274)
T ss_pred             e
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG3653|consensus

Probab=98.04  E-value=3.5e-06  Score=52.49  Aligned_cols=57  Identities=26%  Similarity=0.299  Sum_probs=46.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh--CCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL--VNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~--l~~~~iv~   94 (94)
                      ...+..+.+|+|.||.||++..  .+..||||++.     .+..+.|..|-+++..  +.|+||++
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~  268 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQ  268 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHH
Confidence            3456778999999999999987  45789999877     5688889999988776  48999863

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.04  E-value=8.8e-06  Score=47.04  Aligned_cols=56  Identities=32%  Similarity=0.354  Sum_probs=41.5

Q ss_pred             eecccCceEEEEEEECCCC------cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTATQ------QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||.|++|.||.+......      ..+++|.+... ........+.+|+.++..++|+||++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~   63 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVK   63 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeee
Confidence            5899999999998864322      46788876532 12244567889999999999999973

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.03  E-value=4.3e-05  Score=44.38  Aligned_cols=56  Identities=21%  Similarity=0.314  Sum_probs=42.1

Q ss_pred             eecccCceEEEEEEECCCCc--EEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTATQQ--NVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .||.|++|.||++.....+.  .+++|.+.. .........+..|+.++.++ +|+||++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~   60 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIIN   60 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeee
Confidence            68999999999998765554  357776652 12344567888999999999 8999873

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.02  E-value=2.9e-05  Score=46.42  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=39.9

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      ||+|+||.||++.....+..+++|.+.... ...........|..++...   .|++|++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~   60 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG   60 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcc
Confidence            689999999999988888999999886421 1222344455666666554   6998863

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.01  E-value=3.8e-05  Score=44.96  Aligned_cols=62  Identities=19%  Similarity=0.257  Sum_probs=46.1

Q ss_pred             ceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCccc--CHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQ--NVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      +|.+.+.||.|++|.||++...   ..+..+++|.+.....  .......+..|+.++..+ +|++++
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~   68 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLV   68 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchh
Confidence            3778899999999999998743   3456789998764211  223456678899999999 688876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.01  E-value=3.1e-05  Score=44.90  Aligned_cols=56  Identities=18%  Similarity=0.269  Sum_probs=40.0

Q ss_pred             eeecccCceEEEEEEECCC------------CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTAT------------QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~------------~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|.+|.||+|.....            ...+++|.+..  ........+..|+.++..++||||++
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~--~~~~~~~~~~~~~~~l~~l~hp~iv~   68 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDP--SHRDISLAFFETASMMRQVSHKHIVL   68 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecCh--hhhhHHHHHHHHHHHHHhCCCCCEee
Confidence            3689999999999974211            22467777653  23344567788889999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.00  E-value=4.7e-05  Score=44.21  Aligned_cols=56  Identities=18%  Similarity=0.218  Sum_probs=40.4

Q ss_pred             eecccCceEEEEEEECCC--CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTAT--QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .||+|+||.||++.....  ...+++|.+... ........+.+|+.++..++|+||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~   59 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQ   59 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhh
Confidence            589999999999864322  234566665532 22345678899999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.00  E-value=4.9e-06  Score=47.99  Aligned_cols=56  Identities=14%  Similarity=0.280  Sum_probs=39.8

Q ss_pred             eeecccCceEEEEEEECCCCc-------EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQ-------NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~-------~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||.|+||.||++.....+.       .+++|.+..  ......+.+..|+.++..++|+|+++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~   63 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDK--SHRNYSESFFEAASMMSQLSHKHLVL   63 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcc--hhHHHHHHHHHHHHHHHhCCCCChhh
Confidence            368999999999997643332       255565542  22345567888999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0578|consensus

Probab=97.98  E-value=5.4e-06  Score=52.34  Aligned_cols=63  Identities=30%  Similarity=0.433  Sum_probs=52.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.....+|.|+.|.||.+.....+..+++|.+....  ....+-+.+|+.+|+...|+|||+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVn  334 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVN  334 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHH
Confidence            456777889999999999999988888899999988532  234567899999999999999973

>KOG0671|consensus

Probab=97.91  E-value=2.5e-05  Score=47.67  Aligned_cols=55  Identities=24%  Similarity=0.413  Sum_probs=47.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV   87 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l   87 (94)
                      ..+|.+...+|+|.||.|..|.+...+..+|+|++.   ......+...-|++++.++
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik---~V~kYreAa~iEi~vLqki  142 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK---NVDKYREAALIEIEVLQKI  142 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHH---HHHHHhhHHHHHHHHHHHH
Confidence            568999999999999999999998888899999887   3456778888999999887

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.91  E-value=1.3e-05  Score=44.84  Aligned_cols=30  Identities=23%  Similarity=0.169  Sum_probs=26.0

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      ..+||+|++|.||.+... .+..+++|.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~   31 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKT   31 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEe
Confidence            368999999999999885 788999998864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0983|consensus

Probab=97.85  E-value=3.8e-05  Score=45.51  Aligned_cols=61  Identities=23%  Similarity=0.303  Sum_probs=51.1

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+.+..||.|..|.|+++..+.++..+|+|.+.+ ..+..+.++++..++++... ++|+||+
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~r-t~Nkee~kRILmDldvv~~s~dcpyIV~  155 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRR-TGNKEENKRILMDLDVVLKSHDCPYIVQ  155 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecc-cCCHHHHHHHHHhhhHHhhccCCCeeee
Confidence            4556789999999999999999999999999885 34667889999999987765 5899874

>KOG0612|consensus

Probab=97.82  E-value=1.4e-06  Score=58.95  Aligned_cols=64  Identities=23%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .++|.++++||+|+||.|....+..++..+|.|++.+.. ..+....-|..|-++|.-.+++||+
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv  138 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIV  138 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHH
Confidence            468999999999999999999999999999999988632 2344567788888888877777765

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.80  E-value=0.00016  Score=42.82  Aligned_cols=51  Identities=24%  Similarity=0.148  Sum_probs=38.0

Q ss_pred             ceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          44 QGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        44 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++.+....++..+++|.+............+..|+.++..++|+||++
T Consensus        13 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~   63 (314)
T cd08216          13 LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP   63 (314)
T ss_pred             CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhh
Confidence            344555555557889999988753334556778999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.78  E-value=0.00034  Score=41.31  Aligned_cols=34  Identities=24%  Similarity=0.238  Sum_probs=26.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCC---CcEEEEEec
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKL   64 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~   64 (94)
                      ..|.+.+.||+|+||.||++.....   ...+++|..
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~   48 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIE   48 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEec
Confidence            5799999999999999999987555   445666643

>PRK10345 hypothetical protein; Provisional

Probab=97.77  E-value=0.00012  Score=41.59  Aligned_cols=54  Identities=20%  Similarity=0.286  Sum_probs=38.8

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-----CCCCCCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-----NHKNVSH   94 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~   94 (94)
                      ...||+|+++.||.  +...... ++|.+...  .......+.+|+.++..+     +|+||++
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~--~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr   65 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHR--GDGGDKEIRRELKYYAHLSRRLIDWSGIPR   65 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecc--ccchHHHHHHHHHHHHHhhccCCCCcccce
Confidence            46899999999996  4334443 68877632  122456789999999998     5798873

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.76  E-value=7.6e-05  Score=41.59  Aligned_cols=56  Identities=20%  Similarity=0.160  Sum_probs=39.9

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCCcccCH------------------------HHHHHHHHHHHHHhhCCCCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV------------------------THAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------~~~~~~~~e~~~l~~l~~~~   91 (94)
                      .+.||+|++|.||++... .+..+++|.+.......                        .....+..|...+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            467999999999999875 78899999877431100                        01233467888888887776


Q ss_pred             C
Q psy3070          92 V   92 (94)
Q Consensus        92 i   92 (94)
                      +
T Consensus        81 i   81 (190)
T cd05145          81 V   81 (190)
T ss_pred             C
Confidence            5

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0670|consensus

Probab=97.74  E-value=0.00018  Score=46.12  Aligned_cols=57  Identities=32%  Similarity=0.392  Sum_probs=46.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      +-..|.+....|.|.|+.|..|.+...+..||||+|.-   +.-..+.-+.|+.+|.+|+
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~  486 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLN  486 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhh
Confidence            45678999999999999999999988888999999983   3445566678888888774

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.74  E-value=0.00014  Score=46.36  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=29.0

Q ss_pred             ecceEEeeeecccCceEEEEEEEC----------------CCCcEEEEEecCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT----------------ATQQNVAIKKLSR   66 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~----------------~~~~~~~~k~~~~   66 (94)
                      .++|.+.+.||+|+||.||+|...                ..+..+++|.+..
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~  196 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNM  196 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecc
Confidence            568999999999999999998641                2234688998763

>KOG0695|consensus

Probab=97.70  E-value=1.7e-05  Score=48.18  Aligned_cols=64  Identities=19%  Similarity=0.210  Sum_probs=53.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      ..+|.++++||+|++.+|..+++..+...+++|.+.+.. .......+...|-.++... +||.+|
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflv  314 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLV  314 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEE
Confidence            468999999999999999999988899999999888643 3556778888888888876 677765

>KOG0576|consensus

Probab=97.69  E-value=3.3e-06  Score=54.65  Aligned_cols=64  Identities=22%  Similarity=0.284  Sum_probs=53.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +..++|.....+|+|.+|.||++++..++...++|.+..  ......+.+.+|+-+++..+|+|||
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkL--ep~dd~~~iqqei~~~~dc~h~niv   75 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKL--EPGDDFSGIQQEIGMLRDCRHPNIV   75 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeec--cCCccccccccceeeeecCCCcChH
Confidence            345679999999999999999999988888889998874  2334567778899999999999996

>KOG0587|consensus

Probab=97.68  E-value=0.00022  Score=47.72  Aligned_cols=61  Identities=25%  Similarity=0.340  Sum_probs=49.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      .+.|.+.+++|.|.+|.||++.....++..++|++..   .......+..|..++..+ +|||++
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~---~~d~deEiE~eynil~~~~~hpnv~   79 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP---TEDEEEEIELEYNMLKKYSHHPNVA   79 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC---CccccHHHHHHHHHHHhccCCCCcc
Confidence            4568889999999999999999888888899998773   344555667788888776 899986

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.66  E-value=0.00045  Score=37.90  Aligned_cols=54  Identities=31%  Similarity=0.471  Sum_probs=42.6

Q ss_pred             ecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        39 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ||.|.+|.+|++.....+..+++|.+...... ...+.+.+|+..+..+.|++++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~   54 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS-SLLEELLREIEILKKLNHPNIV   54 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccch-hHHHHHHHHHHHHHhcCCCCee
Confidence            58899999999998666888999987742111 1457789999999999988875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=97.66  E-value=0.00031  Score=40.49  Aligned_cols=58  Identities=28%  Similarity=0.248  Sum_probs=39.4

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHh-hCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMK-LVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~-~l~~~~iv~   94 (94)
                      +.||.|.+|.||++.....+..+++|.+..... .......+..|..++. ...|+|+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   61 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK   61 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeee
Confidence            468999999999999877888999998764211 1222334455555443 348898863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1163|consensus

Probab=97.64  E-value=0.00013  Score=42.64  Aligned_cols=58  Identities=22%  Similarity=0.323  Sum_probs=41.1

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      ......|.+++.||+|+||.+|.+.....+..||+|.=....    ..-.+.-|..+...++
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a----~hpqL~yEskvY~iL~   68 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA----KHPQLLYESKVYRILQ   68 (341)
T ss_pred             heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC----CCcchhHHHHHHHHhc
Confidence            345678999999999999999999988899999999533211    1122445555555443

>KOG0608|consensus

Probab=97.63  E-value=2.9e-05  Score=50.69  Aligned_cols=64  Identities=22%  Similarity=0.297  Sum_probs=53.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +-|..++.||-|+||+|.++....+...++.|.++++ ...+........|-++|...+++|||+
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVr  693 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVR  693 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEE
Confidence            4478889999999999999887677778899988874 446677888899999999999999984

>KOG0604|consensus

Probab=97.62  E-value=1.2e-05  Score=48.03  Aligned_cols=59  Identities=27%  Similarity=0.406  Sum_probs=47.9

Q ss_pred             eecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.++|.+. .+||-|..|.|..|.++.++..+|+|.+.       +.....+|+++.... .|+|||+
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-------Ds~KARrEVeLHw~~s~h~~iV~  119 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-------DSPKARREVELHWMASGHPHIVS  119 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-------cCHHHHhHhhhhhhhcCCCceEE
Confidence            46778766 79999999999999999999999999877       345567888876554 7999973

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.61  E-value=0.00068  Score=39.22  Aligned_cols=62  Identities=8%  Similarity=-0.030  Sum_probs=45.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHH------HHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKR------AYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~------~~~e~~~l~~l~~~~iv   93 (94)
                      ..+|...+++|.|.||.||....  .+..+++|.+..... .....+.      +.+|+..+.++.|+++.
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~   98 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLA   98 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCC
Confidence            35799999999999999998655  355789998874322 2222233      57888899999999875

>KOG0607|consensus

Probab=97.59  E-value=4.3e-05  Score=46.17  Aligned_cols=59  Identities=25%  Similarity=0.361  Sum_probs=49.1

Q ss_pred             eEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          33 YQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        33 ~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      |++. ++||+|+++.|-.|....++..+++|++.+  .......+..+|++++... .|+||+
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidK--q~gHsR~RvfREVe~f~~Cqgh~nil  139 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDK--QPGHSRSRVFREVETFYQCQGHKNIL  139 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhc--CCchHHHHHHHHHHHHHHhcCCccHH
Confidence            4443 799999999999998878899999999995  4556788899999988776 799986

>KOG0986|consensus

Probab=97.57  E-value=2.3e-05  Score=49.06  Aligned_cols=63  Identities=24%  Similarity=0.296  Sum_probs=51.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..|..-++||+|+||.|+.|....+|.-+|.|.+.+... .+......++|-.+|.+++++.||
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiV  248 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIV  248 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEE
Confidence            457888999999999999999988998888887775322 334456678999999999998886

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.54  E-value=0.00049  Score=40.30  Aligned_cols=56  Identities=20%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             eecccCceEEEEEEECCCCcEEEEEecCCcccC-HHHHHHHHHHHHHHh---hCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-VTHAKRAYREFKLMK---LVNHKNVS   93 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~---~l~~~~iv   93 (94)
                      .||+|+||.||++.....+..+++|.+...... ......+..+..++.   ..+|++++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   60 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV   60 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEe
Confidence            479999999999998778889999987643221 122233344443333   34678775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG1006|consensus

Probab=97.52  E-value=5.8e-05  Score=44.55  Aligned_cols=62  Identities=24%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh-CCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL-VNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~   94 (94)
                      +.+-+..||.|+||.|++-.++.++...|+|.++... ...+.+.++.|.++..+ -..||||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n-~~keq~rll~e~d~~mks~~cp~IVk  127 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN-IEKEQKRLLMEHDTVMKSSNCPNIVK  127 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc-chHHHHHHHHHHHHHHhhcCCcHHHH
Confidence            3456678999999999999999999999999998532 34677888888876444 47888763

>KOG0200|consensus

Probab=97.52  E-value=0.00039  Score=45.31  Aligned_cols=68  Identities=26%  Similarity=0.326  Sum_probs=49.2

Q ss_pred             eeeeec-ceEEeeeecccCceEEEEEEEC---CC----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          26 KFTILK-RYQNLKPIGSGAQGIVCAAYDT---AT----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        26 ~~~~~~-~~~~~~~lg~g~~~~v~~~~~~---~~----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .|++.. +..+.+.+|+|.||.|+++...   ..    ...+++|.+... ....+.+.+..|+.+|..+ .|+|+++
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~-~~~~~~~~~~~El~~m~~~g~H~niv~  366 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKEN-ASSSEKKDLMSELNVLKELGKHPNIVN  366 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccc-cCcHHHHHHHHHHHHHHHhcCCcchhh
Confidence            444433 3456679999999999998732   11    345788877743 2337889999999999998 7999873

>KOG0984|consensus

Probab=97.51  E-value=0.0003  Score=40.30  Aligned_cols=72  Identities=19%  Similarity=0.323  Sum_probs=53.5

Q ss_pred             eecCeeeeeec-ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHh-hCCCCCCC
Q psy3070          21 EVGDTKFTILK-RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMK-LVNHKNVS   93 (94)
Q Consensus        21 ~~~~~~~~~~~-~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~-~l~~~~iv   93 (94)
                      .++...++... +......||+|++|.+-+-++...|...|+|.+.. ..+.+..+..++|+.+.. ...+|++|
T Consensus        35 ~I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~-tvn~q~q~r~L~dldi~~r~~~CPf~V  108 (282)
T KOG0984|consen   35 YIGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRA-TVNSQEQKRLLMDLDIIMRTVDCPFTV  108 (282)
T ss_pred             EEecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehh-hcChHHHHHHHHhhhhhccCCCCCeEE
Confidence            34444455543 35566789999999998888888899999999884 345678888899998744 45788766

>KOG4645|consensus

Probab=97.50  E-value=7.5e-05  Score=51.78  Aligned_cols=63  Identities=27%  Similarity=0.318  Sum_probs=50.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +++....+|.|.||.||.+-....|...++|.+.-..........+..|..++..+.|||+|+
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~ 1298 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVR 1298 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccc
Confidence            567778999999999999998888888899977632223344556788999999999999984

>KOG0664|consensus

Probab=97.46  E-value=7.1e-05  Score=44.47  Aligned_cols=63  Identities=38%  Similarity=0.613  Sum_probs=48.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+.+..+.||-|+||.||...+..++..+++|.+.--..+-...+.+-+|+.+|.-..|.|++
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVL  115 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVL  115 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHH
Confidence            345677899999999999999988999999887663223334566778888888888888875

>KOG0669|consensus

Probab=97.44  E-value=8.4e-07  Score=51.73  Aligned_cols=64  Identities=33%  Similarity=0.485  Sum_probs=47.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+.|.....+|+|.||+||+++....+..+++|.+-.........-..++|+.+|..+.|+|++
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~   79 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVV   79 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHH
Confidence            4567777899999999999998877887777765432111223445678999999999999886

>KOG1345|consensus

Probab=97.42  E-value=8.8e-05  Score=43.97  Aligned_cols=63  Identities=21%  Similarity=0.317  Sum_probs=47.1

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      .+.+.|.+.+.+|+|.||.+.+++++.+...+++|.+..   ......+|.+|..---.| .|.||+
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~---p~tt~~dF~rEfhY~~~Ls~H~hIi   84 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR---PQTTQADFVREFHYSFFLSPHQHII   84 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc---chhhHHHHHHHhccceeeccchhhh
Confidence            345679999999999999999999999999999998884   223556777776533233 455554

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.41  E-value=0.00095  Score=39.05  Aligned_cols=56  Identities=21%  Similarity=0.137  Sum_probs=36.2

Q ss_pred             eecccCceEEEEEEECCCCcEEEEEecCCcccC-HHHHHHHHHHHH---HHhhCCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN-VTHAKRAYREFK---LMKLVNHKNVS   93 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~---~l~~l~~~~iv   93 (94)
                      .||+|++|.||++.....+..+++|.+...... ......+..+..   .+....|++++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   60 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV   60 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEe
Confidence            479999999999988777889999987743211 112222333333   34445788875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>smart00090 RIO RIO-like kinase

Probab=97.28  E-value=0.00057  Score=39.58  Aligned_cols=35  Identities=17%  Similarity=0.035  Sum_probs=29.8

Q ss_pred             ceEEeeeecccCceEEEEEE-ECCCCcEEEEEecCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAY-DTATQQNVAIKKLSR   66 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~-~~~~~~~~~~k~~~~   66 (94)
                      .|.+.+.||.|.+|.||++. ....+..+++|.+..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~   64 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT   64 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence            47788999999999999998 556788999998764

>KOG0596|consensus

Probab=97.25  E-value=0.00032  Score=45.11  Aligned_cols=62  Identities=24%  Similarity=0.325  Sum_probs=47.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      ..|.+++.||.|+-+.||++... ....+++|.+.....+.+....+++|+..|.++ .|.+|+
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~II  423 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKII  423 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEE
Confidence            35899999999999999999873 334456665554345677889999999999998 566664

>KOG0599|consensus

Probab=97.21  E-value=0.00011  Score=43.71  Aligned_cols=66  Identities=15%  Similarity=0.271  Sum_probs=51.3

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc---c---cCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP---F---QNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~---~---~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      .+...|...+.+|.|..+.+.+|....++..+++|.+...   .   ....-.+.-.+|+.+|+++ .||+|+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II   86 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYII   86 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            3566788889999999999999988888888999987741   1   1223345668899999997 799986

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.21  E-value=0.0012  Score=42.77  Aligned_cols=36  Identities=25%  Similarity=0.292  Sum_probs=31.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC----CcEEEEEecC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT----QQNVAIKKLS   65 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~----~~~~~~k~~~   65 (94)
                      .++|.+.+.||+|+||.||++.+...    +..+++|.+.
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~  170 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKAT  170 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEec
Confidence            56899999999999999999998776    7789999765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.18  E-value=0.0027  Score=35.77  Aligned_cols=50  Identities=30%  Similarity=0.381  Sum_probs=38.8

Q ss_pred             CceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          43 AQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        43 ~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|.+|++.....+..+++|.+...... .....+..|+..+.+++|++++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~   50 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIK-KKRERILREISILKKLKHPNIV   50 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccc-cHHHHHHHHHHHHHhCCCCcHH
Confidence            4789999998777888999987742211 1167889999999999999886

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4721|consensus

Probab=97.08  E-value=0.00035  Score=45.42  Aligned_cols=51  Identities=29%  Similarity=0.402  Sum_probs=38.4

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.-++.||+|+-|.||.|...  +..||+|.++.         --..+|..|++|+|+||++
T Consensus       126 IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~  176 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIIT  176 (904)
T ss_pred             hhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceee
Confidence            345679999999999999873  45678886552         1135677899999999973

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.01  E-value=0.0019  Score=36.19  Aligned_cols=33  Identities=27%  Similarity=0.173  Sum_probs=27.8

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      |.+.+.||.|.+|.||++.. ..+..+++|.+..
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~   49 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALD-PDGNPVALKFHRL   49 (198)
T ss_pred             hhcCCccccCcceEEEEEEc-CCCCEEEEEEEec
Confidence            67778999999999999987 4688899997653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.96  E-value=0.0044  Score=34.82  Aligned_cols=55  Identities=20%  Similarity=0.119  Sum_probs=37.6

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCccc-CH-----HHHHHHHHHHHHHhhCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NV-----THAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~-----~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +.||+|.+|.||++..  .+..+++|....... ..     .....+.+|+.++..+.++++.
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   62 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVN   62 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            4789999999999986  455677886443211 11     1234678899998888777653

>KOG1165|consensus

Probab=96.90  E-value=0.0022  Score=39.25  Aligned_cols=56  Identities=27%  Similarity=0.352  Sum_probs=39.9

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV   87 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l   87 (94)
                      .+.-.|.+.+.||.|+||.++.|...-.+.++|||.=..    ....-.+..|......|
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr----kS~APQLrdEYr~YKlL   80 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR----KSEAPQLRDEYRTYKLL   80 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEeccc----cCCcchHHHHHHHHHHH
Confidence            345579999999999999999999878888999995332    22233345555554444

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.88  E-value=0.003  Score=34.80  Aligned_cols=30  Identities=33%  Similarity=0.400  Sum_probs=25.1

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      .+.||+|++|.||.+... .+..+++|.+..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~   31 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRT   31 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEec
Confidence            457899999999999874 678899998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0696|consensus

Probab=96.88  E-value=0.0006  Score=42.84  Aligned_cols=40  Identities=28%  Similarity=0.283  Sum_probs=34.3

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP   67 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~   67 (94)
                      ....+|..+.+||+|+||.|.+++.+.+...+++|++.+.
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKD  385 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKD  385 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccCcchhhhhhhhccc
Confidence            3456788899999999999999998888888999988864

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=96.75  E-value=0.0039  Score=36.30  Aligned_cols=36  Identities=22%  Similarity=0.184  Sum_probs=28.2

Q ss_pred             cceEEeee--ecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          31 KRYQNLKP--IGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        31 ~~~~~~~~--lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      +.|.+.+.  +|.|.||.||++.....+..+++|.+..
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~   51 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKA   51 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence            34555544  5999999999999878888899998763

>KOG0665|consensus

Probab=96.63  E-value=0.0042  Score=37.69  Aligned_cols=69  Identities=72%  Similarity=1.014  Sum_probs=54.4

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+....+|..+..++.|.- .|..+.+.-.+.++++|.+.....+.....+..+|..++..+.|+|+++
T Consensus        11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~   79 (369)
T KOG0665|consen   11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIIS   79 (369)
T ss_pred             cceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceee
Confidence            55667788999999998887 5666666667788888877765455556778899999999999999874

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.58  E-value=0.0099  Score=33.11  Aligned_cols=53  Identities=19%  Similarity=0.180  Sum_probs=36.0

Q ss_pred             eecccCceEEEEEEECCCCcEEEEEecCCcc-cC-----HHHHHHHHHHHHHHhhCCCCCC
Q psy3070          38 PIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QN-----VTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        38 ~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~-----~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      .||+|.+|.||++..  .+..+++|...... ..     ......+.+|+.++..+.++++
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   59 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV   59 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            479999999999985  34567888644211 11     1124567889999988876654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.53  E-value=0.018  Score=37.19  Aligned_cols=59  Identities=17%  Similarity=0.209  Sum_probs=38.5

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEe-cCCccc-----CHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKK-LSRPFQ-----NVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~-~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |...+.||+|.+|.||++.+....  +++|. +.+...     .......+.+|+.++..++|++++
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~  399 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVP  399 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence            455789999999999998864332  23332 211111     112346688999999999988864

>KOG1164|consensus

Probab=96.47  E-value=0.0095  Score=35.94  Aligned_cols=55  Identities=24%  Similarity=0.291  Sum_probs=37.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCC-cEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQ-QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      .|.+.+.||+|+||.||.+...... ..+++|.-....  ......+..|..++..+.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~--~~~~~~l~~E~~vl~~l~   74 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKEL--GSKPSVLKIEIQVLKKLE   74 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecc--cCCCccchhHHHHHHHHh
Confidence            7999999999999999999975543 467777644211  111114566777776664

>KOG0614|consensus

Probab=96.31  E-value=0.00059  Score=43.75  Aligned_cols=65  Identities=15%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++++.+..||-|+||.|-+.........+|+|++.+. .......+.+..|-.+|...++++||+
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvr  484 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVR  484 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHH
Confidence            45667788999999999988876545445788888864 345567788899999999999998873

>KOG1167|consensus

Probab=96.31  E-value=0.0012  Score=40.97  Aligned_cols=60  Identities=23%  Similarity=0.385  Sum_probs=45.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECC---CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv   93 (94)
                      ...|.....+|.|.|+.||.+....   ....+++|.+..    .+....+..|+++|..+ .+.||+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~----ts~p~ri~~El~~L~~~gG~~ni~   98 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR----TSSPSRILNELEMLYRLGGSDNII   98 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccc----ccCchHHHHHHHHHHHhccchhhh
Confidence            4568889999999999999987654   566889997773    23455688899888877 455553

>KOG1027|consensus

Probab=96.18  E-value=0.0038  Score=41.99  Aligned_cols=55  Identities=27%  Similarity=0.369  Sum_probs=41.8

Q ss_pred             eEEeeeecccCceE-EEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          33 YQNLKPIGSGAQGI-VCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~-v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      |...+.+|.|+.|. ||+|.+  .+..||+|++-     ......+.+|+..|+.. .|||||+
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll-----~e~~~~A~rEi~lL~eSD~H~NviR  567 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL-----EEFFDFAQREIQLLQESDEHPNVIR  567 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHh-----hHhHHHHHHHHHHHHhccCCCceEE
Confidence            44557888888865 789987  35678888765     34566788999999887 7999974

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.08  E-value=0.067  Score=31.09  Aligned_cols=58  Identities=31%  Similarity=0.528  Sum_probs=43.6

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH-HHHHHHHHHHHHHhhCCCC-CCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV-THAKRAYREFKLMKLVNHK-NVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~-~iv   93 (94)
                      |.+...+|.|.|+.+|.+...   ..+++|.+....... .....+.+|+.++..+.|+ +++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   61 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIV   61 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCccee
Confidence            667789999999999999875   567788777532222 3577889999999999776 454

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=95.96  E-value=0.032  Score=31.91  Aligned_cols=45  Identities=27%  Similarity=0.156  Sum_probs=31.1

Q ss_pred             cCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          42 GAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        42 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      |.++.||++.+..++..+++|.+....       ....+...+....|+|++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~   48 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMV   48 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCcee
Confidence            788999999998889999999887421       122333334445678775

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.80  E-value=0.02  Score=37.25  Aligned_cols=36  Identities=22%  Similarity=0.271  Sum_probs=30.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      ...|.. +.+|+|++|.|+.+....+|..+++|.+..
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP  154 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP  154 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence            445666 789999999999999866688999998874

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=95.60  E-value=0.057  Score=28.08  Aligned_cols=48  Identities=15%  Similarity=0.168  Sum_probs=35.2

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH   89 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~   89 (94)
                      .+.++.|.++.+|++....  ..+++|.......    ...+..|+..+..+.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~   50 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLAR   50 (155)
T ss_pred             ceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHH
Confidence            4678999999999998733  5688888764211    4567888888887754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK12274 serine/threonine protein kinase; Provisional

Probab=95.57  E-value=0.089  Score=30.39  Aligned_cols=58  Identities=14%  Similarity=0.057  Sum_probs=36.9

Q ss_pred             EEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHH--HHHHHHHHHHHHhhCCC-CCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVT--HAKRAYREFKLMKLVNH-KNVS   93 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~~e~~~l~~l~~-~~iv   93 (94)
                      .+...|+++.||.|+....  .+..++.+.+....-...  ....+.+|+.+|.++.| ++++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP   65 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTP   65 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCC
Confidence            3567899999999996543  555666555553211111  22357899999999954 4443

>KOG0603|consensus

Probab=95.07  E-value=0.0069  Score=39.49  Aligned_cols=61  Identities=25%  Similarity=0.341  Sum_probs=46.1

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+.+.|.....+|.|+|+.+..|.+..++...++|++.+.      ......|+.++... +|+|+++
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~------~~~~~~e~~~~~~~~~h~niv~  380 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR------ADDNQDEIPISLLVRDHPNIVK  380 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccc------ccccccccchhhhhcCCCccee
Confidence            4567888889999999999999998888888899988853      22234566555544 7888864

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.05  E-value=0.053  Score=34.38  Aligned_cols=29  Identities=28%  Similarity=0.305  Sum_probs=25.0

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      +.+|++++|.||++.. ..|..+++|....
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp  151 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRP  151 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCC
Confidence            5799999999999987 4678999998763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1166|consensus

Probab=94.37  E-value=0.1  Score=36.31  Aligned_cols=35  Identities=29%  Similarity=0.336  Sum_probs=29.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      ..|.+.+.+|.|++|.||++.... +..+|+|.-..
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P  732 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKP  732 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecC
Confidence            468899999999999999999855 88899996443

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.19  E-value=0.04  Score=28.67  Aligned_cols=28  Identities=25%  Similarity=0.252  Sum_probs=23.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLS   65 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~   65 (94)
                      ..++.++.++|+++... .|..+++|...
T Consensus        17 ~PlasASiaQVh~a~l~-~g~~VaVKV~r   44 (119)
T PF03109_consen   17 EPLASASIAQVHRARLK-DGEEVAVKVQR   44 (119)
T ss_pred             chhhheehhhheeeeec-ccchhhhhhcc
Confidence            57899999999999874 47889999766

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1024|consensus

Probab=92.69  E-value=0.059  Score=34.11  Aligned_cols=62  Identities=15%  Similarity=0.104  Sum_probs=40.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcE-----EEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~-----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+++....+-+|.||.||.|.+.....+     +-+|.+.. ....-....++.|.-.+..+.|+|+.
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll  350 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLL  350 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCcc
Confidence            3466777888999999999976433332     22233321 11223455678888888888999985

>KOG1033|consensus

Probab=92.51  E-value=0.02  Score=36.77  Aligned_cols=64  Identities=19%  Similarity=0.330  Sum_probs=47.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +..++....++|.|.|+.++.+.....+..++||+|... .........++++..+.++.|++++
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlk-n~e~s~~rvl~~~~s~a~feh~g~~  110 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLK-NREESRSRVLREVSSLAEFEHPGIK  110 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhccc-chhhhhhhhhccccchhhhcccchh
Confidence            345678889999999999998887667777888888742 1223455667777777777787664

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=91.96  E-value=0.38  Score=27.35  Aligned_cols=50  Identities=18%  Similarity=0.213  Sum_probs=34.7

Q ss_pred             EEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH   89 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~   89 (94)
                      ...+.|++|.++.||.|.+.  +..+++|.-..    ......+..|+++|..+..
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~----ds~r~~l~kEakiLeil~g   74 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRR----DSPRRNLEKEAKILEILAG   74 (201)
T ss_pred             hhhhhhhcccccEEEEeecc--CceEEEEEecC----CcchhhHHHHHHHHHHhhh
Confidence            45678999999999999873  44677775442    2344566777777766543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=91.74  E-value=0.94  Score=27.45  Aligned_cols=50  Identities=22%  Similarity=0.228  Sum_probs=36.3

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHH
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREF   81 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~   81 (94)
                      .+.....||.|.++.||.+.+..++..+++|...... ......+.+.+|.
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~   63 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQ   63 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHH
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHH
Confidence            4567789999999999999999999999998755322 2223445555554

>cd05151 ChoK Choline Kinase (ChoK)

Probab=90.45  E-value=0.63  Score=25.03  Aligned_cols=48  Identities=10%  Similarity=0.044  Sum_probs=30.7

Q ss_pred             eeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        36 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      .+.++.|..+.+|+....  +..+++|......   .....+..|+.++..+.
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~   50 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGT---ELLINRENEAENSKLAA   50 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCc---ccccCHHHHHHHHHHHH
Confidence            356788899999998763  6678889765321   11223456666666653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=90.29  E-value=1.4  Score=24.64  Aligned_cols=51  Identities=8%  Similarity=0.204  Sum_probs=34.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH   89 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~   89 (94)
                      +.++.|..+.+|+.... .+..+++|........ .....+..|..++..+.+
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~   54 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAG   54 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhC
Confidence            56788999999998763 3467888976632111 134567888888887754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=87.18  E-value=4.1  Score=23.59  Aligned_cols=31  Identities=23%  Similarity=0.240  Sum_probs=27.1

Q ss_pred             cceEEeeeecccCc-eEEEEEEECCCCcEEEEEe
Q psy3070          31 KRYQNLKPIGSGAQ-GIVCAAYDTATQQNVAIKK   63 (94)
Q Consensus        31 ~~~~~~~~lg~g~~-~~v~~~~~~~~~~~~~~k~   63 (94)
                      ++++.++.||.|.. |.|++...  .+..+|+|.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKl   68 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKL   68 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEE
Confidence            67899999999999 99999986  456899998

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=85.20  E-value=1.4  Score=29.01  Aligned_cols=29  Identities=28%  Similarity=0.266  Sum_probs=24.8

Q ss_pred             eeecccCceEEEEEEECCCCcEEEEEecCC
Q psy3070          37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSR   66 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   66 (94)
                      ..++.++.|+|+++.. .+|..|++|....
T Consensus       131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrP  159 (517)
T COG0661         131 EPIASASIAQVHRAVL-KSGEEVAVKVQRP  159 (517)
T ss_pred             CchhhhhHhhheeEEe-cCCCEEEEEecCC
Confidence            5788999999999998 4588999998774

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=84.66  E-value=4.9  Score=23.53  Aligned_cols=54  Identities=17%  Similarity=0.266  Sum_probs=33.2

Q ss_pred             eeec-ccCceEEEEEEECCCCcEEEEEecCCccc-----------CHHHHHHHHHHHHHHhhCCCCCC
Q psy3070          37 KPIG-SGAQGIVCAAYDTATQQNVAIKKLSRPFQ-----------NVTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        37 ~~lg-~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      ..+| .|+.|.+|.....  +..+++|.......           .......+.+|+.++..+.++++
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi  102 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGL  102 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCC
Confidence            3455 5666666666552  45677776643110           11234567889999999987765

>KOG0195|consensus

Probab=83.86  E-value=0.087  Score=31.90  Aligned_cols=57  Identities=12%  Similarity=0.180  Sum_probs=37.3

Q ss_pred             EeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          35 NLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        35 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +...|.....|+.|+|++..  ..++.|++.-.........+|..|...|+-..||||+
T Consensus       194 l~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnil  250 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNIL  250 (448)
T ss_pred             hhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchh
Confidence            34566677788889998742  3345565553222334556788888888878999985

>KOG0606|consensus

Probab=80.88  E-value=1.4  Score=31.64  Aligned_cols=33  Identities=30%  Similarity=0.416  Sum_probs=28.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEE
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK   62 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k   62 (94)
                      ..+|..++.+..|++|.||...++.+.++++.|
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k  114 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK  114 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc
Confidence            467899999999999999999988788888884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	94
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-33
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-33
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-33
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-33
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-33
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-33
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-33
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-33
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-33
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-33
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-33
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		5e-33
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		6e-33
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		8e-33
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		8e-33
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		8e-33
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-33
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-32
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-32
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-32
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-32
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-32
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-32
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-32
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-32
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-32
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-32
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-32
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-32
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-31
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-31
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-30
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-23
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		4e-23
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		4e-23
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-23
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-23
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-22
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-22
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-22
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-22
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-22
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-22
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-22
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		4e-22
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		4e-22
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-22
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-22
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-22
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-22
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-22
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-22
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		5e-22
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		5e-22
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		5e-22
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		5e-22
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		5e-22
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		5e-22
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-22
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-22
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-22
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-22
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-22
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		5e-22
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-22
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-22
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-22
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-22
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-22
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		9e-22
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-22
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-21
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-21
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-21
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-21
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-21
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-21
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-21
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-21
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-21
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-21
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-21
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-21
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-21
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-21
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-21
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-21
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-21
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-21
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-21
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-19
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-19
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		1e-19
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-19
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-16
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-14
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-14
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-11
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-10
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-09
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-08
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		8e-08
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-07
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		4e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		6e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		4e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		5e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-04
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		4e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		5e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		5e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		5e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		5e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		5e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		5e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		5e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		5e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		5e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		5e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		5e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		5e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-04
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		5e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		5e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		6e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-04
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		7e-04

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score =  137 bits (345), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 42  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101
Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
            THAKRAYRE  LMK VNHKN+
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNI 123

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNI 85

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11  SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
           S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 42  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101
Query: 71  VTHAKRAYREFKLMKLVNHKNV 92
            THAKRAYRE  LMK VNHKN+
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNI 123

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNI 85

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/89 (71%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Query: 4  IGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKK 63
          +G+ SR S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKK
Sbjct: 3  LGSMSR-SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 61
Query: 64 LSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          LSRPFQN THAKRAYRE  LMK VNHKN+
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNI 90

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 5  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 64
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNI 86

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 3  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 62
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 63 QTHAKRAYRELVLMKCVNHKNI 84

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score =  136 bits (342), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score =  135 bits (341), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 5  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 64
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNI 86

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score =  135 bits (341), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Query: 5  GASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL 64
          G+ SR S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKL
Sbjct: 1  GSMSR-SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 59
Query: 65 SRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          SRPFQN THAKRAYRE  LMK VNHKN+
Sbjct: 60 SRPFQNQTHAKRAYRELVLMKCVNHKNI 87

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score =  135 bits (340), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score =  135 bits (340), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNI 85

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score =  135 bits (339), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score =  135 bits (339), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score =  135 bits (339), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 5  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 64
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNI 86

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score =  134 bits (338), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 60/76 (78%), Positives = 68/76 (89%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN THAKR
Sbjct: 4  FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 64 AYRELVLMKCVNHKNI 79

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score =  134 bits (338), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score =  134 bits (338), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (338), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 71/82 (86%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK+VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNI 85

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (338), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (337), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 71/82 (86%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK+VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNI 85

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score =  134 bits (337), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 14 STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTH 73
          +  F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN TH
Sbjct: 1  ANQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 74 AKRAYREFKLMKLVNHKNV 92
          AKRAYRE  LMK VNHKN+
Sbjct: 61 AKRAYRELVLMKCVNHKNI 79

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score =  134 bits (337), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/76 (80%), Positives = 67/76 (88%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN THAKR
Sbjct: 4  FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 64 AYRELVLMKCVNHKNI 79

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (337), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (336), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 71/82 (86%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK+VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNI 85

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score =  134 bits (336), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/76 (80%), Positives = 67/76 (88%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN THAKR
Sbjct: 3  FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 63 AYRELVLMKCVNHKNI 78

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  134 bits (336), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNI 85

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score =  133 bits (334), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/76 (80%), Positives = 67/76 (88%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN THAKR
Sbjct: 3  FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 63 AYRELVLMKCVNHKNI 78

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  130 bits (326), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/82 (73%), Positives = 70/82 (85%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIV AAYD   ++NVAIKKLSRPFQN
Sbjct: 4  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK+VNHKN+
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNI 85

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score =  129 bits (325), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S++   F++VEV D+ FT+LKRYQ LKPIGSGAQGIVCAA+DT    NVA+KKLSRPFQN
Sbjct: 4  SKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN 63
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  L+K VNHKN+
Sbjct: 64 QTHAKRAYRELVLLKCVNHKNI 85

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score =  127 bits (320), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S + + F++V+V D+ FT+LKRYQ LKPIGSGAQGIVCAA+DT    NVA+KKLSRPFQN
Sbjct: 2  SHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN 61
Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  L+K VNHKN+
Sbjct: 62 QTHAKRAYRELVLLKCVNHKNI 83

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3   LIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           L+   S MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+K
Sbjct: 14  LVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK 73
Query: 63  KLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           KLSRPFQ++ HAKR YRE +L+K + H+NV
Sbjct: 74  KLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3   LIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           L+   S MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+K
Sbjct: 14  LVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK 73
Query: 63  KLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           KLSRPFQ++ HAKR YRE +L+K + H+NV
Sbjct: 74  KLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3   LIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           L+   S MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+K
Sbjct: 13  LVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK 72
Query: 63  KLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           KLSRPFQ++ HAKR YRE +L+K + H+NV
Sbjct: 73  KLSRPFQSIIHAKRTYRELRLLKHMKHENV 102

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  102 bits (253), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3   LIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           L+   S MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+K
Sbjct: 13  LVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 72
Query: 63  KLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           KLSRPFQ++ HAKR YRE +L+K + H+NV
Sbjct: 73  KLSRPFQSIIHAKRTYRELRLLKHMKHENV 102

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  102 bits (253), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3   LIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           L+   S MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+K
Sbjct: 14  LVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 73
Query: 63  KLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           KLSRPFQ++ HAKR YRE +L+K + H+NV
Sbjct: 74  KLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 3  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENV 85

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 3  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENV 85

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10  MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
           MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 24  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 70  NVTHAKRAYREFKLMKLVNHKNV 92
           ++ HAKR YRE +L+K + H+NV
Sbjct: 84  SIIHAKRTYRELRLLKHMKHENV 106

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 7  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENV 89

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENV 95

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENV 95

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 6  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENV 88

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENV 94

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 3  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENV 85

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 7  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENV 89

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENV 94

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ
Sbjct: 1  MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENV 83

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 4  FYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 64 TYRELRLLKHMKHENV 79

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 4  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 64 TYRELRLLKHMKHENV 79

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 8   SRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP 67
           S  S+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRP
Sbjct: 22  SNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 81
Query: 68  FQNVTHAKRAYREFKLMKLVNHKNV 92
           FQ++ HAKR YRE +L+K + H+NV
Sbjct: 82  FQSIIHAKRTYRELRLLKHMKHENV 106

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 4  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 64 TYRELRLLKHMKHENV 79

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 18 FYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 77
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 78 TYRELRLLKHMKHENV 93

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/76 (57%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL PIGSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 73 TYRELRLLKHMKHENV 88

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/83 (53%), Positives = 60/83 (72%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS+    F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLS+PFQ
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HAKR YRE +L+K + H+NV
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENV 95

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 73
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 74 TYRELRLLKHMKHENV 89

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 5  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 65 TYRELRLLKHMKHENV 80

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 8  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 68 TYRELRLLKHMKHENV 83

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 73 TYRELRLLKHMKHENV 88

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 7  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 66
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 67 TYRELRLLKHMKHENV 82

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 5  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 65 TYRELRLLKHMKHENV 80

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 6  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 65
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 66 TYRELRLLKHMKHENV 81

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 4  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 64 TYRELRLLKHMKHENV 79

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 75 TYRELRLLKHMKHENV 90

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 73 TYRELRLLKHMKHENV 88

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 69
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 70 TYRELRLLKHMKHENV 85

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 8  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 68 TYRELRLLKHMKHENV 83

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 75 TYRELRLLKHMKHENV 90

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 75 TYRELRLLKHMKHENV 90

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 75 TYRELRLLKHMKHENV 90

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 74 TYRELRLLKHMKHENV 89

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS     F+  E+  T + + +R Q L+P+GSGA G VC+AYD   +Q VA+KKLSRPFQ
Sbjct: 7  MSGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ 66
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HA+R YRE +L+K + H+NV
Sbjct: 67 SLIHARRTYRELRLLKHLKHENV 89

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          MS     F+  E+  T + + +R Q L+P+GSGA G VC+AYD   +Q VA+KKLSRPFQ
Sbjct: 7  MSGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ 66
Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          ++ HA+R YRE +L+K + H+NV
Sbjct: 67 SLIHARRTYRELRLLKHLKHENV 89

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 56/76 (73%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +R Q L+P+GSGA G VC+AYD   +Q VA+KKLSRPFQ++ HA+R
Sbjct: 6  FYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARR 65
Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 66 TYRELRLLKHLKHENV 81

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 17  FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
           F+  E+  T + + +RYQ L P+GSGA G VC++YD  +   +A+KKLSRPFQ++ HAKR
Sbjct: 37  FYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR 96
Query: 77  AYREFKLMKLVNHKNV 92
            YRE +L+K + H+NV
Sbjct: 97  TYRELRLLKHMKHENV 112

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  EV  T + +   Y++L+P+GSGA G VC+A D  T   VAIKKL RPFQ+   AKR
Sbjct: 11 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 70
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE +L+K + H+NV
Sbjct: 71 AYRELRLLKHMRHENV 86

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 17  FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
           F+  +V  T + + K Y +   +GSGA G VC+A D  + + VAIKKLSRPFQ+   AKR
Sbjct: 28  FYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR 87
Query: 77  AYREFKLMKLVNHKNV 92
           AYRE  L+K + H+NV
Sbjct: 88  AYRELLLLKHMQHENV 103

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  +V  T + + K Y +   +GSGA G VC+A D  + + VAIKKLSRPFQ+   AKR
Sbjct: 10 FYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR 69
Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  L+K + H+NV
Sbjct: 70 AYRELLLLKHMQHENV 85

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLA 79
Query: 87 VNHKNV 92
            H+N+
Sbjct: 80 FRHENI 85

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 27 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 85
Query: 87 VNHKNV 92
            H+N+
Sbjct: 86 FRHENI 91

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 77
Query: 87 VNHKNV 92
            H+N+
Sbjct: 78 FRHENI 83

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLA 79
Query: 87 VNHKNV 92
            H+N+
Sbjct: 80 FRHENI 85

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 77
Query: 87 VNHKNV 92
            H+N+
Sbjct: 78 FRHENI 83

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 79
Query: 87 VNHKNV 92
            H+N+
Sbjct: 80 FRHENI 85

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27  FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
           F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 39  FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 97
Query: 87  VNHKNV 92
             H+N+
Sbjct: 98  FRHENI 103

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 77
Query: 87 VNHKNV 92
            H+N+
Sbjct: 78 FRHENI 83

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 77
Query: 87 VNHKNV 92
            H+N+
Sbjct: 78 FRHENI 83

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 77
Query: 87 VNHKNV 92
            H+N+
Sbjct: 78 FRHENI 83

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27  FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
           F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 39  FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 97
Query: 87  VNHKNV 92
             H+N+
Sbjct: 98  FRHENI 103

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 82
Query: 87 VNHKNV 92
            H+N+
Sbjct: 83 FRHENI 88

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 75
Query: 87 VNHKNV 92
            H+N+
Sbjct: 76 FRHENI 81

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 25 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 83
Query: 87 VNHKNV 92
            H+N+
Sbjct: 84 FRHENI 89

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 16 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 74
Query: 87 VNHKNV 92
            H+N+
Sbjct: 75 FRHENI 80

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 82
Query: 87 VNHKNV 92
            H+N+
Sbjct: 83 FRHENI 88

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 75
Query: 87 VNHKNV 92
            H+N+
Sbjct: 76 FRHENI 81

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAI+K+S PF++ T+ +R  RE K++  
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILLR 81
Query: 87 VNHKNV 92
            H+N+
Sbjct: 82 FRHENI 87

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 24  DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL 83
           D  F +   Y+ ++ IG+GA G+V +A    T Q VAIKK+   F  VT+AKR  RE K+
Sbjct: 48  DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 84  MKLVNHKNV 92
           +K   H N+
Sbjct: 108 LKHFKHDNI 116

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 24  DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL 83
           D  F +   Y+ ++ IG+GA G+V +A    T Q VAIKK+   F  VT+AKR  RE K+
Sbjct: 47  DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 84  MKLVNHKNV 92
           +K   H N+
Sbjct: 107 LKHFKHDNI 115

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 27  FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
           F +  RY  L+ IG GA G+V +AYD   +  VAIKK+S PF++ T+ +R  RE +++  
Sbjct: 39  FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLR 97
Query: 87  VNHKNV 92
             H+NV
Sbjct: 98  FRHENV 103

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLV 87
          +L++Y+ +K +G GA GIV  + D  T + VA+KK+   FQN T A+R +RE  ++ +L 
Sbjct: 7  VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 88 NHKNV 92
           H+N+
Sbjct: 67 GHENI 71

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 25  TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
           + + I  RY+    IG+G+ G VC AYD   ++ VAIKK+ R F+++   KR  RE  ++
Sbjct: 47  SDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAIL 106
Query: 85  KLVNHKNV 92
             +NH +V
Sbjct: 107 NRLNHDHV 114

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKK--LSRPFQNVTHAKRAYREFKLM 84
          F +  RY +LKP+G G  G+V +A D    + VAIKK  L+ P Q+V H   A RE K++
Sbjct: 7  FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKH---ALREIKII 62
Query: 85 KLVNHKNV 92
          + ++H N+
Sbjct: 63 RRLDHDNI 70

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          + I   +Q    +G GA G+VC+A    T + VAIKK+  PF     A R  RE K++K 
Sbjct: 7  YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 87 VNHKNV 92
            H+N+
Sbjct: 66 FKHENI 71

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          + I   +Q    +G GA G+VC+A    T + VAIKK+  PF     A R  RE K++K 
Sbjct: 7  YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 87 VNHKNV 92
            H+N+
Sbjct: 66 FKHENI 71

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          + I   +Q    +G GA G+VC+A    T + VAIKK+  PF     A R  RE K++K 
Sbjct: 7  YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 87 VNHKNV 92
            H+N+
Sbjct: 66 FKHENI 71

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          IG G+ G V  AYD  T++NVAIKK++R F+++   KR  RE  ++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          IG G+ G V  AYD    +NVAIKK++R F+++   KR  RE  ++
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITIL 81

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F  +++Y+NL  +G G+ G+V    +  T + VAIKK      +    K A RE KL+K 
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 87 VNHKNV 92
          + H+N+
Sbjct: 81 LRHENL 86

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 87
          T + RY+ +  +G G  G V  A DT T + VAIK++    +       A RE  L+K +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 88 NHKNV 92
           H+N+
Sbjct: 91 QHRNI 95

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VAIK + +   N T  ++ +RE ++MK++NH N+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VAIK + +   N T  ++ +RE ++MK++NH N+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 6  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 54

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 6  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 54

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 6  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 54

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          ++++Y+ +  IG G+ G+V    +  T Q VAIKK      +    K A RE +++K + 
Sbjct: 1  MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 89 HKNV 92
          H N+
Sbjct: 61 HPNL 64

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          L  +   V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 7  LEKLRSIVSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 55

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 3  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 90 KNV 92
           N+
Sbjct: 63 PNI 65

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 4  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 90 KNV 92
           N+
Sbjct: 64 PNI 66

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 9  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 90 KNV 92
           N+
Sbjct: 69 PNI 71

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 4  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 90 KNV 92
           N+
Sbjct: 64 PNI 66

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 6  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 90 KNV 92
           N+
Sbjct: 66 PNI 68

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 3  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 90 KNV 92
           N+
Sbjct: 63 PNI 65

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS 65
          V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++
Sbjct: 14 VSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN 55

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 6  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 90 KNV 92
           N+
Sbjct: 66 PNI 68

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 5  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 90 KNV 92
           N+
Sbjct: 65 PNI 67

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 4  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 90 KNV 92
           N+
Sbjct: 64 PNI 66

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 1  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 9  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 90 KNV 92
           N+
Sbjct: 69 PNI 71

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 4  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 90 KNV 92
           N+
Sbjct: 64 PNI 66

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 1  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 3  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 90 KNV 92
           N+
Sbjct: 63 PNI 65

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 3  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 90 KNV 92
           N+
Sbjct: 63 PNI 65

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 3  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 90 KNV 92
           N+
Sbjct: 63 PNI 65

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 1  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 90 KNV 92
           N+
Sbjct: 62 PNI 64

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +       A RE K+++L+ H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 90 KNV 92
          +NV
Sbjct: 77 ENV 79

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +       A RE K+++L+ H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 90 KNV 92
          +NV
Sbjct: 77 ENV 79

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 1  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VA+K + +   N +  ++ +RE ++MK++NH N+
Sbjct: 9  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +       A RE K+++L+ H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 90 KNV 92
          +NV
Sbjct: 76 ENV 78

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VA+K + +   N +  ++ +RE ++MK++NH N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VA+K + +   N +  ++ +RE ++MK++NH N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ LK IG G    V  A    T + VA+K + +   N +  ++ +RE ++MK++NH N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +       A RE K+++L+ H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 90 KNV 92
          +NV
Sbjct: 77 ENV 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-39
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	7e-39
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-37
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-36
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-35
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-35
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-35
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-33
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-33
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-32
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-31
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-31
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-21
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-21
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-20
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-18
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-10
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-09
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-09
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	7e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-08
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-08
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	9e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-07
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-06
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	9e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-05
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	8e-04

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  133 bits (336), Expect = 1e-39
 Identities = 61/82 (74%), Positives = 70/82 (85%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+    F++VE+GD+ FT+LKRYQNLKPIGSGAQGIVCAAYD   ++NVAIKKLSRPFQN
Sbjct: 5  SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 64

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
           THAKRAYRE  LMK VNHKN+
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNI 86

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  133 bits (336), Expect = 7e-39
 Identities = 64/94 (68%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 1   MPLIGASSRMSR--LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQN 58
           +  I     MS+  +   F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +N
Sbjct: 30  VSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN 89

Query: 59  VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           VAIKKLSRPFQN THAKRAYRE  LMK VNHKN+
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  127 bits (321), Expect = 2e-37
 Identities = 37/76 (48%), Positives = 50/76 (65%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  +V  T + + K Y +   +GSGA G VC+A D  + + VAIKKLSRPFQ+   AKR
Sbjct: 10 FYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR 69

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  L+K + H+NV
Sbjct: 70 AYRELLLLKHMQHENV 85

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  125 bits (316), Expect = 1e-36
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  EV  T + +   Y++L+P+GSGA G VC+A D  T   VAIKKL RPFQ+   AKR
Sbjct: 11 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 70

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE +L+K + H+NV
Sbjct: 71 AYRELRLLKHMRHENV 86

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  122 bits (309), Expect = 1e-35
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 74

Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 75 TYRELRLLKHMKHENV 90

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  122 bits (308), Expect = 5e-35
 Identities = 24/82 (29%), Positives = 38/82 (46%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
             S   +    G     +   Y     IG G+ G V  AYD  T++NVAIKK++R F++
Sbjct: 6  HHSSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED 65

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
          +   KR  RE  ++  +    +
Sbjct: 66 LIDCKRILREITILNRLKSDYI 87

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  121 bits (306), Expect = 5e-35
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 23 GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 82
          G     +L++Y+ +K +G GA GIV  + D  T + VA+KK+   FQN T A+R +RE  
Sbjct: 1  GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM 60

Query: 83 LMK-LVNHKNV 92
          ++  L  H+N+
Sbjct: 61 ILTELSGHENI 71

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  117 bits (296), Expect = 1e-33
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 81
               + I   +Q    +G GA G+VC+A    T + VAIKK+  PF     A R  RE 
Sbjct: 2  PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREI 60

Query: 82 KLMKLVNHKNV 92
          K++K   H+N+
Sbjct: 61 KILKHFKHENI 71

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  115 bits (290), Expect = 7e-33
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL---------SRP 67
              ++      +   Y   + I SG+ G VCA  D+     VAIK++            
Sbjct: 8  AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNI 66

Query: 68 FQNVTHAKRAYREFKLMKLVNHKNV 92
            +    KR  RE +L+   +H N+
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNI 91

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  113 bits (286), Expect = 2e-32
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 81
          +    F +  RY +LKP+G G  G+V +A D    + VAIKK+     +    K A RE 
Sbjct: 2  MNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREI 59

Query: 82 KLMKLVNHKNV 92
          K+++ ++H N+
Sbjct: 60 KIIRRLDHDNI 70

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  111 bits (281), Expect = 2e-31
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
               V    F +  RY NL  IG GA G+VC+AYD   +  VAIKK+S PF++ T+ +R
Sbjct: 13 AGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR 71

Query: 77 AYREFKLMKLVNHKNV 92
            RE K++    H+N+
Sbjct: 72 TLREIKILLRFRHENI 87

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  112 bits (281), Expect = 4e-31
 Identities = 26/76 (34%), Positives = 43/76 (56%)

Query: 17  FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
             ++    + + I  RY+    IG+G+ G VC AYD   ++ VAIKK+ R F+++   KR
Sbjct: 39  TASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR 98

Query: 77  AYREFKLMKLVNHKNV 92
             RE  ++  +NH +V
Sbjct: 99  ILREIAILNRLNHDHV 114

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          +   E    ++     YQ ++ +G G    V  A +    + V +K L +P +     K+
Sbjct: 22 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL-KPVK----KKK 76

Query: 77 AYREFKLMK-LVNHKNV 92
            RE K+++ L    N+
Sbjct: 77 IKREIKILENLRGGPNI 93

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 84.8 bits (210), Expect = 3e-21
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 87
          T  K+Y   K +G+G+ GIVC  +D  + +  A+KK+ +        +   RE  +MK++
Sbjct: 4  TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ------DPRYKNRELDIMKVL 57

Query: 88 NHKNV 92
          +H N+
Sbjct: 58 DHVNI 62

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 83.1 bits (206), Expect = 1e-20
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
            + ++       +     + R+Q  +  G G  G V    + +T  +VAIKK+    Q+
Sbjct: 3  GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV---IQD 59

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
               R  +  + + +++H N+
Sbjct: 60 PRFRNRELQIMQDLAVLHHPNI 81

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 78.6 bits (194), Expect = 6e-19
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 2   PLIGASSRMSRLSTMFHTVEV-----GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQ 56
           P    S ++SR         V               Y + K IG+G+ G+V  A    + 
Sbjct: 20  PSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG 79

Query: 57  QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           + VAIKK+    Q     +   RE ++M+ ++H N+
Sbjct: 80  ELVAIKKV---LQ---DKRFKNRELQIMRKLDHCNI 109

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 75.4 bits (186), Expect = 7e-18
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 18 HTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRA 77
               G T       Y N K IG+G+ G+V  A    + + VAIKK+ +        +  
Sbjct: 27 VLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ------DKRFK 79

Query: 78 YREFKLMKLVNHKNV 92
           RE ++M++V H NV
Sbjct: 80 NRELQIMRIVKHPNV 94

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 61.0 bits (149), Expect = 8e-13
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          ++++Y+ +  IG G+ G+V    +  T Q VAIKK      +    K A RE +++K + 
Sbjct: 1  MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60

Query: 89 HKNV 92
          H N+
Sbjct: 61 HPNL 64

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 24 DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL 83
          +  F  +++Y+NL  +G G+ G+V    +  T + VAIKK      +    K A RE KL
Sbjct: 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL 77

Query: 84 MKLVNHKNV 92
          +K + H+N+
Sbjct: 78 LKQLRHENL 86

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 54.0 bits (130), Expect = 3e-10
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          ++ T    +     +G GA   V       T    AIK  +     +       REF+++
Sbjct: 3  SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI-SFLRPVDVQMREFEVL 61

Query: 85 KLVNHKNV 92
          K +NHKN+
Sbjct: 62 KKLNHKNI 69

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 53.1 bits (128), Expect = 5e-10
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 23  GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR----PFQNVTHAKRAY 78
           G  K  +  +YQ    +GSG  G V +    +    VAIK + +     +  + +  R  
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94

Query: 79  REFKLMKLVNHK 90
            E  L+K V+  
Sbjct: 95  MEVVLLKKVSSG 106

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 53.5 bits (128), Expect = 5e-10
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
                  ++  + +G+G  G V       T + VAIK+  +   +  + +R   E ++M
Sbjct: 8  LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIM 66

Query: 85 KLVNHKNV 92
          K +NH NV
Sbjct: 67 KKLNHPNV 74

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 53.3 bits (128), Expect = 5e-10
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          ++ T    +     +G GA   V       T    AIK  +     +       REF+++
Sbjct: 3  SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI-SFLRPVDVQMREFEVL 61

Query: 85 KLVNHKNV 92
          K +NHKN+
Sbjct: 62 KKLNHKNI 69

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 53.2 bits (128), Expect = 5e-10
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR------PFQNVTHAKRAYREFK 82
            ++Y  + P+GSGA G V  A D    + V +K + +       +       +   E  
Sbjct: 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIA 81

Query: 83 LMKLVNHKNV 92
          ++  V H N+
Sbjct: 82 ILSRVEHANI 91

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 19 TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 78
           V + +  +  ++       +G G    V            A+K++          + A 
Sbjct: 23 MVIIDNKHYLFIQ------KLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQ 74

Query: 79 REFKLMKLVNHKNV 92
          RE  + +L NH N+
Sbjct: 75 READMHRLFNHPNI 88

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           ++ +  ++ +G GA G V  A +  T++ VA+K +    + V   +   +E  + K++N
Sbjct: 5  FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 63

Query: 89 HKNV 92
          H+NV
Sbjct: 64 HENV 67

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 12/65 (18%), Positives = 26/65 (40%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 87
          +  + Y+ L  IG+G+ G        +  + +  K+L          +    E  L++ +
Sbjct: 3  SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62

Query: 88 NHKNV 92
           H N+
Sbjct: 63 KHPNI 67

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHK 90
           Y     +G G  G V       T   VA+K L+R   +++    +  RE + +KL  H 
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 91 NV 92
          ++
Sbjct: 72 HI 73

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           ++ +  ++ +G GA G V  A +  T++ VA+K +    + V   +   +E  + K++N
Sbjct: 5  FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN 63

Query: 89 HKNV 92
          H+NV
Sbjct: 64 HENV 67

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYRE-FKLMKLV 87
              +  L+ IGSG  G V            AIK+  +P       + A RE +    L 
Sbjct: 9  YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68

Query: 88 NHKNV 92
           H +V
Sbjct: 69 QHSHV 73

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           Y+ LK IG G    V  A    T + VAIK + +   N T  ++ +RE ++MK++NH N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75

Query: 92 V 92
          +
Sbjct: 76 I 76

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP--FQNVTHAKRAYREFKLMKL 86
          ++ +Y     +G G+ G V    D+ T    A+K L +    +         +E +L++ 
Sbjct: 3  LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62

Query: 87 VNHKNV 92
          + HKNV
Sbjct: 63 LRHKNV 68

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 50.9 bits (122), Expect = 3e-09
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHK 90
           Y     +G G  G V       T   VA+K L+R   +++    +  RE + +KL  H 
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76

Query: 91 NV 92
          ++
Sbjct: 77 HI 78

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 50.8 bits (122), Expect = 3e-09
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
            +RY  +  +G G+ G V    D  TQQ  A+K +++            RE +L+K ++
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79

Query: 89 HKNV 92
          H N+
Sbjct: 80 HPNI 83

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 23 GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 82
          G TK  I + Y     IG G+ G V  A    T+   A KK+ +    V    R  +E +
Sbjct: 1  GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK--YFVEDVDRFKQEIE 58

Query: 83 LMKLVNHKNV 92
          +MK ++H N+
Sbjct: 59 IMKSLDHPNI 68

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 14/73 (19%), Positives = 32/73 (43%)

Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR 79
          +   +  F  +++Y  L+ IG G+ G       T   +   IK+++    +    + + R
Sbjct: 13 LGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR 72

Query: 80 EFKLMKLVNHKNV 92
          E  ++  + H N+
Sbjct: 73 EVAVLANMKHPNI 85

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          + + YQ +K +GSGA G V    D  T    AIK + +   + +   +   E  ++KL++
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94

Query: 89 HKNV 92
          H N+
Sbjct: 95 HPNI 98

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 50.5 bits (121), Expect = 5e-09
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLV 87
             RY+  + +G G+ G V    D  T Q  A+K +S R  +  T  +   RE +L+K +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83

Query: 88 NHKNV 92
          +H N+
Sbjct: 84 DHPNI 88

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHK 90
           Y   + +G G+ G V  A    TQQ VA+K +SR   +      R  RE   +KL+ H 
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69

Query: 91 NV 92
          ++
Sbjct: 70 HI 71

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 32 RYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          R+      IG G+   V    DT T   VA  +L       +  +R   E +++K + H 
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 85

Query: 91 NV 92
          N+
Sbjct: 86 NI 87

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.1 bits (120), Expect = 7e-09
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY  +K IGSG  G+     D  T++ VA+K + R        +   RE    + + H N
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER---GAAIDENVQREIINHRSLRHPN 77

Query: 92 V 92
          +
Sbjct: 78 I 78

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 49.9 bits (119), Expect = 7e-09
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 31 KRYQNLKPIGSGAQ--GIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
            Y+ L  IG G +    V  A    T + V +++++    +         E  + KL N
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 84

Query: 89 HKNV 92
          H N+
Sbjct: 85 HPNI 88

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.8 bits (119), Expect = 8e-09
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP---FQNVTHAKRAYREFKLMK 85
          + K+Y     IG G+ G+V  A +  T+   AIK +++      N    +R   E +LMK
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83

Query: 86 LVNHKNVSH 94
           ++H N++ 
Sbjct: 84 KLHHPNIAR 92

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---NVTHAKRAYREFKLMKL 86
          ++ Y  L  +G G    V       T   VA+K++    +     T    A RE  L+K 
Sbjct: 1  METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT----AIREVSLLKD 56

Query: 87 VNHKNV 92
          + H N+
Sbjct: 57 LKHANI 62

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
            +RY  +  +G G+ G V    D  TQQ  A+K +++            RE +L+K ++
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79

Query: 89 HKNV 92
          H N+
Sbjct: 80 HPNI 83

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 48.8 bits (117), Expect = 1e-08
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 8/80 (10%)

Query: 21  EVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR----PFQNVTHAKR 76
             G  +      Y+    +G G  G V A +    +  VAIK + R     +  ++ +  
Sbjct: 21  PGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVT 80

Query: 77  AYREFKLMKLVN----HKNV 92
              E  L+  V     H  V
Sbjct: 81  CPLEVALLWKVGAGGGHPGV 100

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR------PFQNVTHAKRAYREFK 82
           +   Y   K +GSGA G V  A++  T + VAI+ +S+        +    A     E +
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192

Query: 83  LMKLVNHKNV 92
           ++K +NH  +
Sbjct: 193 ILKKLNHPCI 202

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          +H V++GD       RY  ++ +G G    V  ++D   ++ VA+K +        + + 
Sbjct: 26 YHLVKIGDL---FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTET 79

Query: 77 AYREFKLMKLVNHKNVSH 94
          A  E +L+K V + + + 
Sbjct: 80 ALDEIRLLKSVRNSDPND 97

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 24/94 (25%)

Query: 23 GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR---------------- 66
                 L +Y     IG G+ G+V  AY+       A+K LS+                
Sbjct: 5  SSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPR 64

Query: 67 --------PFQNVTHAKRAYREFKLMKLVNHKNV 92
                    Q     ++ Y+E  ++K ++H NV
Sbjct: 65 GTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
            + YQ  + +G GA  +V         Q  A   ++    +    ++  RE ++ +L+ 
Sbjct: 9  FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68

Query: 89 HKNV 92
          H N+
Sbjct: 69 HPNI 72

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR---AYREFKLMKLV 87
          K+Y   + IG GA G V  A D AT Q VAI+++     N+    +      E  +M+  
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-----NLQQQPKKELIINEILVMREN 74

Query: 88 NHKNV 92
           + N+
Sbjct: 75 KNPNI 79

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR-----AYREFKLM 84
           KRY+ L  +G G    V  A D  T Q VAIKK+     + + AK      A RE KL+
Sbjct: 9  AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI--KLGHRSEAKDGINRTALREIKLL 66

Query: 85 KLVNHKNV 92
          + ++H N+
Sbjct: 67 QELSHPNI 74

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVN 88
           +RY   + +G G         D  T++  A K + +         ++   E  + + + 
Sbjct: 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA 73

Query: 89 HKNV 92
          H++V
Sbjct: 74 HQHV 77

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 48.5 bits (116), Expect = 3e-08
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
              ++ +  +G GA G V  A +    +  AIKK+    + ++       E  L+  +N
Sbjct: 4  YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL---SEVMLLASLN 60

Query: 89 HKNV 92
          H+ V
Sbjct: 61 HQYV 64

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 19 TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 78
          TVE+G+ +  + +       +  G    V  A D  + +  A+K+L          +   
Sbjct: 22 TVELGELRLRVRRV------LAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAII 73

Query: 79 REFKLMK-LVNHKNV 92
          +E   MK L  H N+
Sbjct: 74 QEVCFMKKLSGHPNI 88

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR------PFQNVTHAKRAYREFK 82
          +   Y   K +GSGA G V  A++  T + VAIK +S+        +    A     E +
Sbjct: 8  LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67

Query: 83 LMKLVNHKNV 92
          ++K +NH  +
Sbjct: 68 ILKKLNHPCI 77

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 31  KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR---AYREFKLMKLV 87
               +   IG G+ GIVC A +  + + VA+K +     ++   +R    + E  +M+  
Sbjct: 45  LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM-----DLRKQQRRELLFNEVVIMRDY 99

Query: 88  NHKNV 92
            H NV
Sbjct: 100 QHFNV 104

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 30  LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVN 88
            +RY   + +G G         D  T++  A K + +         ++   E  + + + 
Sbjct: 40  RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA 99

Query: 89  HKNV 92
           H++V
Sbjct: 100 HQHV 103

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 9/66 (13%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY----REFKLMKL 86
            Y+  + IGSGA  +V AAY    ++ VAIK++     N+   + +     +E + M  
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKEIQAMSQ 69

Query: 87 VNHKNV 92
           +H N+
Sbjct: 70 CHHPNI 75

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 10/68 (14%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-----NVTHAKRAYREFKLM 84
          + RY+ +  +G G  G V  A DT T + VAIK++ R          T    A RE  L+
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGT----AIREVSLL 87

Query: 85 KLVNHKNV 92
          K + H+N+
Sbjct: 88 KELQHRNI 95

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          I K +  ++ +GSGA   V       T +  A+K + +             E  ++K + 
Sbjct: 7  IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK--SPAFRDSSLENEIAVLKKIK 64

Query: 89 HKNV 92
          H+N+
Sbjct: 65 HENI 68

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 47.4 bits (113), Expect = 5e-08
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-----------PFQNVTHAKRA 77
           I + Y  ++ +GSGA G V    +       AIK + +                   +  
Sbjct: 34  IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93

Query: 78  YREFKLMKLVNHKNV 92
           Y E  L+K ++H N+
Sbjct: 94  YNEISLLKSLDHPNI 108

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 14/70 (20%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-------PFQNVTHAKRAYREFK 82
          +++Y+ L+ IG G  G V  A +  T + VA+K++         P         A RE  
Sbjct: 1  MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS-------ALREIC 53

Query: 83 LMKLVNHKNV 92
          L+K + HKN+
Sbjct: 54 LLKELKHKNI 63

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 14/70 (20%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-------PFQNVTHAKRAYREFK 82
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+         P         A RE  
Sbjct: 2  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST-------AIREIS 54

Query: 83 LMKLVNHKNV 92
          L+K +NH N+
Sbjct: 55 LLKELNHPNI 64

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 46.9 bits (112), Expect = 9e-08
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 37 KPIGSGAQGIVCAAYDTATQQNVAIKKL-SRPFQNVTHAKRAYREFK----LMKLVNHKN 91
          K IG G  G+V        +  VAIK L     +  T     ++EF+    +M  +NH N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 92 V 92
          +
Sbjct: 85 I 85

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          I   +   + +GSGA G V    + ++     IK +++  ++    ++   E +++K ++
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD-RSQVPMEQIEAEIEVLKSLD 78

Query: 89 HKNV 92
          H N+
Sbjct: 79 HPNI 82

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          L  ++ ++ +G G  G+V  A +     N AIK++  P + +   ++  RE K +  + H
Sbjct: 4  LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-EKVMREVKALAKLEH 62

Query: 90 KNV 92
            +
Sbjct: 63 PGI 65

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 7/87 (8%)

Query: 5  GASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL 64
           +   +   +  F ++ V        + Y  LK IGSG    V    +   +Q  AIK +
Sbjct: 8  SSGVDLGTENLYFQSMSVKG------RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYV 60

Query: 65 SRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +    +         E   +  +   +
Sbjct: 61 NLEEADNQTLDSYRNEIAYLNKLQQHS 87

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 23 GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR-AYREF 81
           D  +  L  ++  K IG G    V  A        VA+KK+         A+    +E 
Sbjct: 24 PDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI 83

Query: 82 KLMKLVNHKNV 92
           L+K +NH NV
Sbjct: 84 DLLKQLNHPNV 94

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 87
               ++ ++ IGSG  G V  A      +   IK++    +       A RE K +  +
Sbjct: 8  RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKL 61

Query: 88 NHKNV 92
          +H N+
Sbjct: 62 DHVNI 66

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          + Y  LK IGSG    V    +   +Q  AIK ++    +         E   +  +   
Sbjct: 9  RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67

Query: 91 N 91
          +
Sbjct: 68 S 68

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 12/71 (16%), Positives = 27/71 (38%)

Query: 22 VGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 81
          + +        Y   + +G GA  +V       T    A K ++    +    ++  RE 
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79

Query: 82 KLMKLVNHKNV 92
          ++ + + H N+
Sbjct: 80 RICRKLQHPNI 90

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 7/65 (10%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 31  KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNH 89
           ++ + ++P+  G + +V    D    ++ A+K  +     + +  +R +        +  
Sbjct: 62  RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121

Query: 90  KNVSH 94
           ++   
Sbjct: 122 ESPEE 126

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---NVTHAKRAYREFKLMKLVN 88
          +++ L+ +G+G    V    +  T   VA+K++    +     T    A RE  LMK + 
Sbjct: 6  QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST----AIREISLMKELK 61

Query: 89 HKNV 92
          H+N+
Sbjct: 62 HENI 65

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 31  KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNH 89
           K + +L+ IG G+ G V  A D    + VAIKK+S   +      +   +E + ++ + H
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113

Query: 90  KNV 92
            N 
Sbjct: 114 PNT 116

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTH-AK 75
          +H    G+       RY  ++ +G G    V  A D     +VA+K +    +      +
Sbjct: 7  YHPAFKGEP--YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV----RGDKVYTE 60

Query: 76 RAYREFKLMKLVNHKNVSH 94
           A  E KL++ VN  + + 
Sbjct: 61 AAEDEIKLLQRVNDADNTK 79

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
              Y   + +G GA  +V       T    A K ++    +    ++  RE ++ + + 
Sbjct: 4  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63

Query: 89 HKNV 92
          H N+
Sbjct: 64 HPNI 67

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 30  LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK-LMKLVN 88
            + +Q L  +G G+ G V         +  A+K+   PF+      R   E     K+  
Sbjct: 56  QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115

Query: 89  HKNV 92
           H   
Sbjct: 116 HPCC 119

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVN 88
          ++ ++    +G G+   V  A    T   VAIK + +         +R   E K+   + 
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69

Query: 89 HKNV 92
          H ++
Sbjct: 70 HPSI 73

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 11/106 (10%), Positives = 31/106 (29%), Gaps = 17/106 (16%)

Query: 2   PLIGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAI 61
           PL      +S  S + +  +    K   +  Y+ ++ +  G    +         +  A+
Sbjct: 2   PLGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKD--NKFYAL 59

Query: 62  KKLSR---------------PFQNVTHAKRAYREFKLMKLVNHKNV 92
           KK  +                    +       E +++  + ++  
Sbjct: 60  KKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 45.2 bits (107), Expect = 4e-07
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 31  KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
           + Y  LK IGSG    V    +   +Q  AIK ++    +         E   +  +   
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114

Query: 91  N 91
           +
Sbjct: 115 S 115

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNH 89
          + +  L+ +G G+ G V  A    T Q VAIK++      V    +   +E  +M+  + 
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIKEISIMQQCDS 83

Query: 90 KNV 92
           +V
Sbjct: 84 PHV 86

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.8 bits (106), Expect = 5e-07
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           +L  Y   + +G+GA G+V    + AT  N A K +     + +  +   +E + M ++ 
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQTMSVLR 212

Query: 89  HKNV 92
           H  +
Sbjct: 213 HPTL 216

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          L  ++ ++ +G G  G+V  A +     N AIK++  P + +   ++  RE K +  + H
Sbjct: 5  LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-EKVMREVKALAKLEH 63

Query: 90 KNV 92
            +
Sbjct: 64 PGI 66

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.0 bits (104), Expect = 9e-07
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 21 EVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYRE 80
           + + + ++     + K +G G+ G V     +   + VA+K++   F        A  E
Sbjct: 5  NIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFC-----DIALME 58

Query: 81 FKLM-KLVNHKNV 92
           KL+ +  +H NV
Sbjct: 59 IKLLTESDDHPNV 71

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          + ++Y   + +G G  GIV    +T++++    K +     +    K   +E  ++ +  
Sbjct: 3  LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK---KEISILNIAR 59

Query: 89 HKNV 92
          H+N+
Sbjct: 60 HRNI 63

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          M+          + + K    + +  L+ IG G+ G V    D  TQ+ VAIK +     
Sbjct: 1  MAHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII----- 55

Query: 70 NVTHAKRAY----REFKLMKLVNHKNV 92
          ++  A+       +E  ++   +   V
Sbjct: 56 DLEEAEDEIEDIQQEITVLSQCDSPYV 82

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 12/69 (17%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN------VTHAKRAYREFKL 83
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +N      +T    A RE K+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPIT----ALREIKI 69

Query: 84 MKLVNHKNV 92
          ++L+ H+NV
Sbjct: 70 LQLLKHENV 78

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           +   Y  L+ +GSGA G+V    + AT +    K ++              E  +M  ++
Sbjct: 49  VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT--PYPLDKYTVKNEISIMNQLH 106

Query: 89  HKNV 92
           H  +
Sbjct: 107 HPKL 110

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 11/68 (16%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-----NVTHAKRAYREFKLM 84
          +++Y  L+ IG G  G+V  A +    +  A+KK+ R  +       T      RE  ++
Sbjct: 1  MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPST----TIREISIL 54

Query: 85 KLVNHKNV 92
          K + H N+
Sbjct: 55 KELKHSNI 62

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 37 KPIGSGAQGIVC-AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          + IG+G+ G V  A +      +VA+K L     +        RE  +MK + H N+
Sbjct: 43 EKIGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 36 LKPIGSGAQGIVC-AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           + +G GA G+VC A +     ++VAIK++    +     K    E + +  VNH N+
Sbjct: 13 EEVVGRGAFGVVCKAKWR---AKDVAIKQIESESER----KAFIVELRQLSRVNHPNI 63

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 7/63 (11%)

Query: 30  LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
           +    +   +G G+ G V    D  T    A+KK       V        E      ++ 
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK-------VRLEVFRVEELVACAGLSS 109

Query: 90  KNV 92
             +
Sbjct: 110 PRI 112

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 15/71 (21%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-------PFQNVTHAKRAYREF 81
          ++++YQ L+ +G G  G+V  A D+   + VA+K++         P         A RE 
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPST-------AIREI 70

Query: 82 KLMKLVNHKNV 92
           L+K ++H N+
Sbjct: 71 SLLKELHHPNI 81

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 10 MSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ 69
          M +     H     D      + ++ +  +G GA G V  A +  T    A K +    +
Sbjct: 2  MRKSREYEHVRRDLDPN----EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETK 55

Query: 70 NVTHAKRAYREFKLMKLVNHKNV 92
          +    +    E +++   +H  +
Sbjct: 56 SEEELEDYIVEIEILATCDHPYI 78

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
               +   +G G  GIV A  D + Q  +AIK++  P ++  +++  + E  L K + H
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKH 78

Query: 90 KNV 92
          KN+
Sbjct: 79 KNI 81

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 23  GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 82
           G  +  +   ++    +G GA  IV       TQ+  A+K L +        K    E  
Sbjct: 45  GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK----TVDKKIVRTEIG 100

Query: 83  LMKLVNHKNV 92
           ++  ++H N+
Sbjct: 101 VLLRLSHPNI 110

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 31  KRYQNL---KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHA-KRAYREFKLMKL 86
           +R + L     +G         A D  T ++  +       +  ++A K+   E   ++L
Sbjct: 75  ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL 134

Query: 87  VNH 89
           +  
Sbjct: 135 LRG 137

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK----KLSRPFQNVTHAKRAYREFKL 83
           +   Y+  + +GSG   IV       T +  A K    +     +     +   RE  +
Sbjct: 2  MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 84 MKLVNHKNV 92
          ++ + H N+
Sbjct: 62 LREIRHPNI 70

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 14/71 (19%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKL-------SRPFQNVTHAKRAYREFKLM 84
          RY+ +  IG GA G V  A D  +   VA+K +             ++      RE  L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS----TVREVALL 65

Query: 85 K---LVNHKNV 92
          +      H NV
Sbjct: 66 RRLEAFEHPNV 76

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 36 LKPIGSGAQGIVC-AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          L  +     G +    +      ++ +K L     +   ++    E   +++ +H NV
Sbjct: 15 LTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.6 bits (98), Expect = 6e-06
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
            ++ ++ +G+G  G V       T Q  AIK +          K+      L K  +H+
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM--LKKYSHHR 81

Query: 91 NV 92
          N+
Sbjct: 82 NI 83

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 39 IGSGAQGIVC-AAYDTATQQNVAIKKL-SRPFQNVTHAKRAY-REFKLMKLVNHKNV 92
          IG G  G V  A +       VA+K     P ++++       +E KL  ++ H N+
Sbjct: 15 IGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 41.2 bits (97), Expect = 9e-06
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK----KLSRPFQNVTHAKRAYREFKLM 84
          +   Y   + +GSG   IV    + +T    A K    + SR  +     +   RE  ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69

Query: 85 KLVNHKNV 92
          + V H N+
Sbjct: 70 RQVLHPNI 77

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVN 88
          +  +   +P+G G  G V  A +   +  +A+K L +   +      +  RE ++   + 
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72

Query: 89 HKNV 92
          H N+
Sbjct: 73 HPNI 76

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAK---RAYREFKLMKL 86
          L+ ++  +P+G G  G V  A +  ++  +A+K L +    +  A    +  RE ++   
Sbjct: 8  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK--AQLEKAGVEHQLRREVEIQSH 65

Query: 87 VNHKNV 92
          + H N+
Sbjct: 66 LRHPNI 71

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK----KLSRPFQNVTHAKRAYREFKLM 84
          +   Y   + +GSG   IV    + +T    A K    + SR  +     +   RE  ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69

Query: 85 KLVNHKNV 92
          + V H NV
Sbjct: 70 RQVLHHNV 77

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 9/70 (12%)

Query: 25 TKFTILKRYQNLK-PIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL 83
           K+ +   YQ  K  +G G  G V   +   T Q  A+K L         + +A +E   
Sbjct: 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD-------SPKARQEVDH 74

Query: 84 M-KLVNHKNV 92
            +     ++
Sbjct: 75 HWQASGGPHI 84

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK----KLSRPFQNVTHAKRAYREFKLM 84
          +   Y   + +GSG   +V    + +T    A K    + ++  +     +   RE  ++
Sbjct: 9  VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68

Query: 85 KLVNHKNV 92
          K + H NV
Sbjct: 69 KEIQHPNV 76

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 26 KFTILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
          K  I+  Y+   + +G G  G V   ++  TQ+  A+K L           +A RE +L 
Sbjct: 12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELH 64

Query: 85 -KLVNHKNV 92
           +     ++
Sbjct: 65 WRASQCPHI 73

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHK 90
          RY+ L   G         A DTA  + VA+  +           +        +  ++  
Sbjct: 32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKP 91

Query: 91 NV 92
           V
Sbjct: 92 GV 93

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK-----KLSRPFQNVTHAKRA-YREFK 82
             ++Y     IG G   +V      AT    A+K           + +   + A  RE  
Sbjct: 92  FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151

Query: 83  LMK-LVNHKNV 92
           +++ +  H ++
Sbjct: 152 ILRQVAGHPHI 162

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
          V+ G+     + RY+    IG G+ G V  AYD   Q+ VAIK
Sbjct: 46 VKNGEK---WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK 85

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 16  MFHTVEVGDTKFTILKRYQ--NLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTH 73
            F    V   +  +   Y     + +G G  G V    +TAT   +A K +    + +  
Sbjct: 72  PFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKD 129

Query: 74  AKRAYREFKLMKLVNHKNV 92
            +    E  +M  ++H N+
Sbjct: 130 KEEVKNEISVMNQLDHANL 148

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
           ++  K IG G  G +    +  T + VAIK         + A + + E++  K + 
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK----SRAPQLHLEYRFYKQLG 62

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 26  KFTILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 84
           K  I+  Y+   + +G G  G V   ++  TQ+  A+K L           +A RE +L 
Sbjct: 56  KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELH 108

Query: 85  K-LVNHKNV 92
                  ++
Sbjct: 109 WRASQCPHI 117

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK---KLSRPFQNVTHAKRAYREFKLMK 85
              Y+  + IG G   +V    +  T Q  A+K               +   RE  +  
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81

Query: 86 LVNHKNV 92
          ++ H ++
Sbjct: 82 MLKHPHI 88

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 5/58 (8%)

Query: 36 LKPIGSGAQGIVC-AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           + IG G  G V    +       VAI+ +     N    K   RE    +   H+NV
Sbjct: 38 GELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENV 91

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           + IGSG+ G V          +VA+K L+         +    E  +++   H N+
Sbjct: 29 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 39.1 bits (91), Expect = 5e-05
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 32  RYQNLKPIGSGAQGIVCAAYDTA-TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
           +Y+    I  G  G +  A D     + V +K L     +      A  E + +  V H 
Sbjct: 81  QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAEVVHP 139

Query: 91  NV 92
           ++
Sbjct: 140 SI 141

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRA-------YREF 81
            + Y+  + +G G   +V       T +  A+K +         A+          +E 
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74

Query: 82 KLMKLVN-HKNV 92
           +++ V+ H N+
Sbjct: 75 DILRKVSGHPNI 86

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 38.9 bits (91), Expect = 7e-05
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 39 IGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNV 92
          +G G  G         T + + +K+L R  +     +R + +E K+M+ + H NV
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEE---TQRTFLKEVKVMRCLEHPNV 69

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 38.6 bits (90), Expect = 7e-05
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 29  ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIK 62
           +  RY+ LK IG G+ G V  AYD    Q+VA+K
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALK 128

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 5  GASSRMSRLSTMFHTVEVGDTKFTI-LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKK 63
          G+S    + +     + +G  ++   +   +NL  +GSG  G V       T   +A+K+
Sbjct: 1  GSSGSSGKQTG---YLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQ 57

Query: 64 LSRPFQNVTHAKRAYREFK-LMKLVNHKNV 92
          + R      + KR   +   ++K  +   +
Sbjct: 58 MRRSGNKEEN-KRILMDLDVVLKSHDCPYI 86

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 38.5 bits (89), Expect = 9e-05
 Identities = 7/63 (11%), Positives = 18/63 (28%), Gaps = 4/63 (6%)

Query: 31  KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR----PFQNVTHAKRAYREFKLMKL 86
           +       +G         A D  T ++  +         P   +   K      +L++ 
Sbjct: 73  RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 132

Query: 87  VNH 89
           + +
Sbjct: 133 IKN 135

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 36 LKPIGSGAQGIVCAAY---DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           K +G G  G V       +  T   VA+K +     +    +    E   MK  +H NV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 16/77 (20%)

Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR 79
           + G     +   +  ++ +G G  G V        ++  A+K        V    + Y 
Sbjct: 27 WKKGML---LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVK--------VVRNIKKYT 75

Query: 80 -----EFKLMKLVNHKN 91
               E  ++K + + +
Sbjct: 76 RSAKIEADILKKIQNDD 92

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
             +G G  G V           VA+K L    ++    +   +E  +MK + H N+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNL 71

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%)

Query: 36 LKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRA--YREFKLMKLVN 88
           K +G G  G V  A        A    VA+K L    +N + ++      EF ++K VN
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVN 84

Query: 89 HKNV 92
          H +V
Sbjct: 85 HPHV 88

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLV 87
              Y+  + IG G+  +       AT    A+K + +        +    E +++ +  
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK------SKRDPTEEIEILLRYG 73

Query: 88 NHKNV 92
           H N+
Sbjct: 74 QHPNI 78

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 9/60 (15%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          ++ +  +G+G  G+V       +   +A K +           +  RE +++   N   +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 93

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 36 LKPIGSGAQGIVCAAY---DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
           + +G G  G V  A    +  +   VA+K L       +  +   RE   MK  +H +V
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 36 LKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKLV 87
          +K +GSGA G V            +  VAIK+L         + +A +E      +M  V
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-----REATSPKANKEILDEAYVMASV 74

Query: 88 NHKNV 92
          ++ +V
Sbjct: 75 DNPHV 79

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 10/64 (15%)

Query: 36  LKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRA--YREFKLMKLVN 88
           ++ IG GA G V  A             VA+K L    +  +   +A   RE  LM   +
Sbjct: 52  VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK---EEASADMQADFQREAALMAEFD 108

Query: 89  HKNV 92
           + N+
Sbjct: 109 NPNI 112

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 12/64 (18%)

Query: 36 LKPIGSGAQGIVCAAY---DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKLVN 88
           + IG G  G V       +   + + A+K L     N         +F     +MK  +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-----NRITDIGEVSQFLTEGIIMKDFS 84

Query: 89 HKNV 92
          H NV
Sbjct: 85 HPNV 88

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK-LMKLVNHKN 91
           ++L  IG GA G V       + Q +A+K++ R   +    K+   +   +M+  +   
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPY 82

Query: 92 V 92
          +
Sbjct: 83 I 83

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 36  LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKN 91
            + IG G  G V +    A    VA+K         T       +F    +++K  +H N
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSC-----RETLPPDLKAKFLQEARILKQYSHPN 173

Query: 92  V 92
           +
Sbjct: 174 I 174

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 37 KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMK-LVNHKNV 92
            +G GA   V    +  T Q  A+K + +  Q      R +RE +++     H+NV
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQGHRNV 73

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 36  LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
              +G G  G V           VA+K L    ++    +   +E  +MK + H N+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNL 278

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 12/64 (18%)

Query: 36  LKPIGSGAQGIVCAAY---DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKLVN 88
            + IG G  G V       +   + + A+K L     N         +F     +MK  +
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-----NRITDIGEVSQFLTEGIIMKDFS 148

Query: 89  HKNV 92
           H NV
Sbjct: 149 HPNV 152

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 32 RYQNLKPIGSGAQGIVCAAY--DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
           Y+  K +G G  G V  A   D    ++ A+K++     +++    A RE  L++ + H
Sbjct: 23 EYEGCK-VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS----ACREIALLRELKH 77

Query: 90 KNV 92
           NV
Sbjct: 78 PNV 80

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHK 90
          RY+ +  +G G    V  A DT     VAIK +  P  +     KR  RE      ++H+
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71

Query: 91 NV 92
          N+
Sbjct: 72 NI 73

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 23 GDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKK 63
          G  +  +  RY+  + IGSG+ G +    D A  + VAIK 
Sbjct: 1  GSMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%)

Query: 36 LKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRA--YREFKLMKLVN 88
           + +G GA G V  A       T  +  VA+K L    ++ T A R    RE +L+  + 
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL----KDPTLAARKDFQREAELLTNLQ 75

Query: 89 HKNV 92
          H+++
Sbjct: 76 HEHI 79

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 14/66 (21%)

Query: 36  LKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKL 86
           ++ +G GA G V         +  +   VA+K L         +++   +F     ++  
Sbjct: 76  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-----PEVCSEQDELDFLMEALIISK 130

Query: 87  VNHKNV 92
            NH+N+
Sbjct: 131 FNHQNI 136

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKL 86
          T    Y+  + +G G  G V  A DT  ++ VA+K +S     +     R  RE +    
Sbjct: 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR 90

Query: 87 VNHKNV 92
          +   +V
Sbjct: 91 LQEPHV 96

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 14/66 (21%)

Query: 36 LKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMKL 86
          ++ +G GA G V         +  +   VA+K L         +++   +F     ++  
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-----PEVCSEQDELDFLMEALIISK 89

Query: 87 VNHKNV 92
           NH+N+
Sbjct: 90 FNHQNI 95

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 36 LKPIGSGAQGIVC-AAYDTA---TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          ++ +G G  G V    YD     T + VA+K L +P     H     +E ++++ + H+N
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHEN 84

Query: 92 V 92
          +
Sbjct: 85 I 85

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 35.7 bits (83), Expect = 8e-04
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 37 KPIGSGAQGIVCAAYDTATQQN---VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          + IG G  G+V         QN    AIK L      +   +   RE  LM+ +NH NV
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNV 84

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 35.7 bits (83), Expect = 8e-04
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 12/63 (19%)

Query: 37 KPIGSGAQGIVCAAY--DTATQQNVAIKKLSRPFQNVTHAKRAYREF----KLMK-LVNH 89
            IG G  G V  A       + + AIK++         +K  +R+F    +++  L +H
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRM-----KEYASKDDHRDFAGELEVLCKLGHH 85

Query: 90 KNV 92
           N+
Sbjct: 86 PNI 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.57
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.57
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.49
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.47
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.47
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.46
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.42
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.41
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.41
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.4
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.4
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.4
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.38
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.37
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.37
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.36
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.34
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.34
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.33
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.29
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.27
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.25
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.23
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.22
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.22
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.21
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.21
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.2
3uqc_A	286	Probable conserved transmembrane protein; structur	99.18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.18
3niz_A	311	Rhodanese family protein; structural genomics, str	99.17
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.16
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.15
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.15
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.12
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.1
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.1
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.08
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.08
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.05
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.04
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.03
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.03
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.03
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.03
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.03
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.02
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.02
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.02
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.02
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.01
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.01
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.01
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.01
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.01
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.01
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.01
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.99
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.99
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.99
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.98
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.98
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.98
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.96
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.95
3bhy_A	283	Death-associated protein kinase 3; death associate	98.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.94
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.94
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.93
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.93
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.93
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.92
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.92
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.92
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.91
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.91
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.91
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.91
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.91
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.9
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.9
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.9
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.9
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.9
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.89
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.89
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.88
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.88
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.88
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.88
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.87
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.87
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.87
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.87
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.87
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.86
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.86
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.86
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.86
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.86
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.86
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.86
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.86
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.86
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.85
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.85
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.85
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.85
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.85
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.84
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.84
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.83
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.82
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.82
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.82
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.82
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.81
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.81
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.81
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.8
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.8
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.8
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.79
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.79
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.79
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.79
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.79
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.79
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.78
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.78
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.78
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.78
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.78
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.77
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.77
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.76
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.75
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.75
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.73
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.73
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.72
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.72
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.7
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.7
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.67
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.67
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.66
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.65
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.64
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.63
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.62
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.61
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.61
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.61
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.61
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.6
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.6
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.58
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.57
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.55
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.54
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.54
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.53
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.53
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.53
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.49
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.46
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.45
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.41
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.41
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.41
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.38
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.37
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.35
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.33
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.3
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.23
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.19
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.93
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.44
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.21
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.76
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	90.42
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.15
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	80.63

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.57  E-value=1.6e-14  Score=85.77  Aligned_cols=68  Identities=21%  Similarity=0.362  Sum_probs=53.7

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +...++|.+.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus        20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~   87 (350)
T 4b9d_A           20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ   87 (350)
T ss_dssp             CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            33457899999999999999999999888999999998865455667888999999999999999985

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.57  E-value=3.2e-14  Score=85.77  Aligned_cols=68  Identities=41%  Similarity=0.638  Sum_probs=59.2

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.++|.+.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+|..++|||||+
T Consensus        50 ~~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  117 (398)
T 4b99_A           50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA  117 (398)
T ss_dssp             CCCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcce
Confidence            44456899999999999999999999889999999999864445566788999999999999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.49  E-value=1e-13  Score=80.85  Aligned_cols=64  Identities=23%  Similarity=0.434  Sum_probs=53.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+... ......+.+.+|+.+|.+++|||||+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~~~~~E~~il~~l~HpnIV~   67 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP-NRELAREKVMREVKALAKLEHPGIVR   67 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEEC-SSHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            45799999999999999999999888999999988742 23445678999999999999999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.47  E-value=4.6e-13  Score=77.86  Aligned_cols=62  Identities=24%  Similarity=0.227  Sum_probs=54.4

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~   89 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR   89 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            46778899999999999999888999999998754455667788999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.47  E-value=5.6e-14  Score=82.33  Aligned_cols=65  Identities=23%  Similarity=0.240  Sum_probs=55.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..++..+|+|.+.+.. ......+.+.+|+.+|..++|||||+
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~   96 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK   96 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            467999999999999999999998899999999987431 12234567899999999999999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.46  E-value=1.8e-13  Score=79.00  Aligned_cols=65  Identities=31%  Similarity=0.483  Sum_probs=49.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+.+... .......+.+|+.+|..++|||||+
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~   77 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK   77 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCe
Confidence            4689999999999999999999988899999999875322 2334567899999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.42  E-value=1e-11  Score=73.96  Aligned_cols=81  Identities=46%  Similarity=0.667  Sum_probs=71.2

Q ss_pred             CcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          14 STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...+.........|.+..+|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++|+||+
T Consensus        25 ~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv  104 (371)
T 4exu_A           25 KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI  104 (371)
T ss_dssp             CTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCch
Confidence            66777788888999999999999999999999999999988899999999875444556678899999999999999997


Q ss_pred             C
Q psy3070          94 H   94 (94)
Q Consensus        94 ~   94 (94)
                      +
T Consensus       105 ~  105 (371)
T 4exu_A          105 G  105 (371)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=3e-12  Score=76.27  Aligned_cols=81  Identities=48%  Similarity=0.724  Sum_probs=62.6

Q ss_pred             CcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          14 STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...+.........+.+.+.|.+.+.||+|+||.||.+.+..++..+++|.+..........+.+.+|+.++..++|+||+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv   87 (367)
T 1cm8_A            8 RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI   87 (367)
T ss_dssp             CCSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred             cCCceEEEecCceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCC
Confidence            34455566777888889999999999999999999999988899999999875444556678899999999999999997


Q ss_pred             C
Q psy3070          94 H   94 (94)
Q Consensus        94 ~   94 (94)
                      +
T Consensus        88 ~   88 (367)
T 1cm8_A           88 G   88 (367)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.41  E-value=4.6e-12  Score=77.59  Aligned_cols=81  Identities=75%  Similarity=1.117  Sum_probs=67.6

Q ss_pred             CcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          14 STMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...++.....+..+.+.++|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..++|+||+
T Consensus        45 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv  124 (464)
T 3ttj_A           45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII  124 (464)
T ss_dssp             -CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCC
Confidence            45566677777788889999999999999999999999988899999999875444566778899999999999999998


Q ss_pred             C
Q psy3070          94 H   94 (94)
Q Consensus        94 ~   94 (94)
                      +
T Consensus       125 ~  125 (464)
T 3ttj_A          125 S  125 (464)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.40  E-value=1.7e-12  Score=75.75  Aligned_cols=63  Identities=24%  Similarity=0.227  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+.     ..+..+|+|.+..  ......+.|.+|+.+|.+++|||||+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~   79 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVK   79 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCcc
Confidence            357899999999999999999864     2466799999874  34566788999999999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.40  E-value=2.7e-12  Score=75.79  Aligned_cols=63  Identities=22%  Similarity=0.252  Sum_probs=52.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+++.+.+.||+|+||.||+|.+..     .+..+|+|.+..  ......+.|.+|+.+|.+++|||||+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~  107 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVR  107 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            3578889999999999999998642     466799999874  34566788999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.40  E-value=1.3e-11  Score=73.59  Aligned_cols=82  Identities=73%  Similarity=1.083  Sum_probs=70.7

Q ss_pred             cCcceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCC
Q psy3070          13 LSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      ....+++..+++..+.+.++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++|+||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni   86 (371)
T 2xrw_A            7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI   86 (371)
T ss_dssp             GGGGEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             ccCcceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCc
Confidence            35677888888888888999999999999999999999988888899999887544455667788999999999999999


Q ss_pred             CC
Q psy3070          93 SH   94 (94)
Q Consensus        93 v~   94 (94)
                      ++
T Consensus        87 v~   88 (371)
T 2xrw_A           87 IG   88 (371)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.38  E-value=5.7e-13  Score=79.09  Aligned_cols=63  Identities=30%  Similarity=0.425  Sum_probs=53.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|+..+.||+|+||.||++.+..++..+|+|.+.....  ...+.+.+|+.+|..++|||||+
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~  135 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVE  135 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCc
Confidence            3569999999999999999999988999999999874321  23456789999999999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.37  E-value=1.2e-12  Score=79.49  Aligned_cols=62  Identities=29%  Similarity=0.421  Sum_probs=53.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.+|..++|||||+
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~  212 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVE  212 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCc
Confidence            56999999999999999999998899999999987532  223456889999999999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.37  E-value=1.7e-11  Score=73.10  Aligned_cols=78  Identities=55%  Similarity=0.889  Sum_probs=62.9

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .......+..|.+.++|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..++|+||++
T Consensus        15 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   92 (367)
T 2fst_X           15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG   92 (367)
T ss_dssp             EEEEEETTEEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cceEeecCcccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            344567788899999999999999999999999998888999999998754445566788899999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.36  E-value=2.4e-11  Score=71.84  Aligned_cols=80  Identities=46%  Similarity=0.675  Sum_probs=68.7

Q ss_pred             cceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          15 TMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|+........+.+.++|.+.+.||.|+||.||++.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus         8 ~~~~~~~~~~~~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   87 (353)
T 3coi_A            8 KGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG   87 (353)
T ss_dssp             HHEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcEEEeecCcccccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccc
Confidence            45666777788899999999999999999999999999888999999998754445556778899999999999999974

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.34  E-value=5.4e-12  Score=73.91  Aligned_cols=64  Identities=23%  Similarity=0.180  Sum_probs=50.0

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+++++.+.||+|+||.||+|.+.     ..+..||+|.+... ......+.|.+|+.+|.+++|||||+
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~-~~~~~~~~f~~E~~il~~l~HpNIV~   93 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVVC   93 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC--CCC-CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc-cChHHHHHHHHHHHHHHhCCCCCCCC
Confidence            456888999999999999999853     24567999998742 22334578999999999999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.34  E-value=7.9e-12  Score=78.35  Aligned_cols=63  Identities=24%  Similarity=0.386  Sum_probs=55.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..++..+|+|.+..  ......+.+.+|+.+|..++|||||+
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~--~~~~~~~~~~~Ei~il~~l~hpnIv~  218 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQTMSVLRHPTLVN  218 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--CSHHHHHHHHHHHHHHHHTCCTTBCC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEec--cchhhHHHHHHHHHHHHhCCCCCCCe
Confidence            4689999999999999999999988999999998874  34456678899999999999999985

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.33  E-value=6.9e-12  Score=73.44  Aligned_cols=62  Identities=21%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+++.+.+.||+|+||.||+|.+.   ..+++|.+..........+.|.+|+.+|.+++|||||+
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~   96 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL   96 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            357889999999999999999863   35899988754445667789999999999999999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.29  E-value=4e-11  Score=70.56  Aligned_cols=67  Identities=33%  Similarity=0.471  Sum_probs=58.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|.+.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++..++||||++
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   78 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK   78 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            3577899999999999999999999888999999998754445667788999999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.27  E-value=2.2e-11  Score=74.26  Aligned_cols=69  Identities=38%  Similarity=0.652  Sum_probs=51.0

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.++|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.+|..++|+||++
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~  116 (458)
T 3rp9_A           48 DWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVK  116 (458)
T ss_dssp             SCCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            355678899999999999999999998888899999988754445567788999999999999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.25  E-value=6.1e-11  Score=71.99  Aligned_cols=69  Identities=32%  Similarity=0.522  Sum_probs=60.3

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.++|.+.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++..++|+||++
T Consensus        21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~   89 (432)
T 3n9x_A           21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR   89 (432)
T ss_dssp             GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcce
Confidence            466788999999999999999999999888899999998754445567788999999999999999974

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.23  E-value=8e-11  Score=67.91  Aligned_cols=64  Identities=31%  Similarity=0.469  Sum_probs=55.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++.+++|+||++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   65 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR   65 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEee
Confidence            5799999999999999999999888999999988754444456678889999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.22  E-value=7e-11  Score=70.33  Aligned_cols=67  Identities=18%  Similarity=0.259  Sum_probs=57.9

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..++||||++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~   92 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR   92 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            3456899999999999999999999888999999998754445566788999999999999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.22  E-value=4.3e-11  Score=69.78  Aligned_cols=65  Identities=23%  Similarity=0.403  Sum_probs=54.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+..++..+++|.+.... .....+.+.+|+.++.+++||||++
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~   68 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVR   68 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCC
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEee
Confidence            4568999999999999999999998889999999887422 3346678999999999999999984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.21  E-value=8.7e-13  Score=77.13  Aligned_cols=65  Identities=25%  Similarity=0.283  Sum_probs=45.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++...   .++..+|+|.+.+..........+.+|+.+|.+++|||||+
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   90 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK   90 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEEC
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCe
Confidence            367999999999999999999863   35678999998753222222345788999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.21  E-value=2e-10  Score=66.62  Aligned_cols=65  Identities=31%  Similarity=0.496  Sum_probs=55.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.+..++..+++|.+..........+.+.+|+.++..++|+||++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   66 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN   66 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccc
Confidence            46899999999999999999999888899999987754444556778899999999999999974

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.20  E-value=1.6e-10  Score=66.31  Aligned_cols=66  Identities=18%  Similarity=0.263  Sum_probs=57.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||.|+||.||++.+...+..+++|.+..........+.+.+|+.++.+++|+||++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   69 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR   69 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCe
Confidence            467899999999999999999999888899999988754445566788999999999999999974

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.18  E-value=3.5e-10  Score=65.40  Aligned_cols=66  Identities=17%  Similarity=0.066  Sum_probs=56.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+.... ......+.+.+|+.++..++|+||++
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~   95 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR   95 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcce
Confidence            3467999999999999999999998888999999988542 23556788999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.18  E-value=5e-11  Score=70.60  Aligned_cols=57  Identities=18%  Similarity=0.151  Sum_probs=48.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|...+.||+|+||.||++.+..++..+|+|.+.....       ..+|+.+|..++|||||+
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~  114 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVP  114 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCc
Confidence            458888999999999999999988999999999875321       146999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.17  E-value=2.1e-10  Score=66.88  Aligned_cols=68  Identities=28%  Similarity=0.459  Sum_probs=53.7

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...+.++|.+.+.||+|+||.||++.+. .+..+++|.+............+.+|+.++..++||||++
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   83 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS   83 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEee
Confidence            3456789999999999999999999984 5788999988753333345677889999999999999984

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.16  E-value=3.1e-10  Score=67.86  Aligned_cols=65  Identities=23%  Similarity=0.206  Sum_probs=57.2

Q ss_pred             ecceEEeeeeccc--CceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSG--AQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|  +||.||++.+...+..+++|.+..........+.+.+|+.++..++|+||++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   90 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP   90 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCc
Confidence            5679999999999  9999999999888999999998764445567788999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.16  E-value=3.2e-10  Score=66.45  Aligned_cols=63  Identities=21%  Similarity=0.393  Sum_probs=54.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+..++..+++|.+..   .......+.+|+.++..++||||++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~   65 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHRNILH   65 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---CTHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec---CcccHHHHHHHHHHHHhCCCCCCCe
Confidence            46789999999999999999999988888999998773   2345667889999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.16  E-value=2.7e-10  Score=66.15  Aligned_cols=68  Identities=35%  Similarity=0.633  Sum_probs=53.0

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.+.++|.+.+.||+|++|.||++.+...+..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~   72 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNIVK   72 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC--CSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec--CChHHHHHHHHHHHHHHhcCCCCeeE
Confidence            345667899999999999999999999988889999998763  34566778899999999999999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.15  E-value=1.1e-10  Score=71.34  Aligned_cols=67  Identities=19%  Similarity=0.303  Sum_probs=55.4

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..++||||++
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~   74 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR   74 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCe
Confidence            3467899999999999999999999888999999988754334456778999999999999999984

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.15  E-value=4.9e-10  Score=64.08  Aligned_cols=65  Identities=18%  Similarity=0.250  Sum_probs=56.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.....+..+++|.+..........+.+.+|+.++..++|+||++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   69 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR   69 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCe
Confidence            46899999999999999999999888899999988754445567788999999999999999974

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.15  E-value=5.4e-10  Score=64.91  Aligned_cols=63  Identities=21%  Similarity=0.277  Sum_probs=55.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+..+++|.+..  ......+.+.+|+.++.+++||||++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~   71 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLK   71 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCccc
Confidence            5689999999999999999999988889999998763  45567788999999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.15  E-value=3.1e-10  Score=67.60  Aligned_cols=64  Identities=28%  Similarity=0.361  Sum_probs=50.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCC-----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC-CCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQ-----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH-KNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|.+...+     ..+++|.+... ......+.+.+|+.+|.++.| ||||+
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            357999999999999999999864332     46899988742 344567789999999999965 89984

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.15  E-value=1.3e-10  Score=67.92  Aligned_cols=59  Identities=20%  Similarity=0.160  Sum_probs=43.5

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|+||.||+|.+  .+..+|+|.+...   .........|+..+.+++|||||+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~   61 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILG   61 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCc
Confidence            4688899999999999999987  4778999988731   112222234555566789999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.15  E-value=5.4e-10  Score=66.37  Aligned_cols=70  Identities=41%  Similarity=0.669  Sum_probs=58.2

Q ss_pred             CeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          24 DTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        24 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++.+.+..+|.+.+.||+|+||.||++.+...+..+++|.+.. .......+.+.+|+.++..++|+||++
T Consensus        20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~   89 (364)
T 3qyz_A           20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENIIG   89 (364)
T ss_dssp             -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC-TTCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecc-ccCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            3445566789999999999999999999888888999998874 234456678899999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.15  E-value=3.5e-10  Score=66.34  Aligned_cols=70  Identities=33%  Similarity=0.478  Sum_probs=59.2

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+...++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   88 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVN   88 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEee
Confidence            3455678999999999999999999999888899999987654445556777889999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.13  E-value=6.3e-10  Score=64.37  Aligned_cols=67  Identities=30%  Similarity=0.359  Sum_probs=57.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++|.+.+.||+|+||.||++.+...+..+++|.+... .......+.+.+|+.++..++||||++
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~   75 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS   75 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCC
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCce
Confidence            3567899999999999999999998888899999987543 234566788999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.13  E-value=2.1e-10  Score=67.32  Aligned_cols=68  Identities=32%  Similarity=0.493  Sum_probs=52.0

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIE   97 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCC
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcce
Confidence            34567899999999999999999998888999999998754333345567789999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.12  E-value=9.7e-10  Score=64.76  Aligned_cols=67  Identities=36%  Similarity=0.567  Sum_probs=56.7

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.++|.+.+.||+|+||.||++.+...+..+++|.+.. .........+.+|+.++..++|+||++
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~   73 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIIT   73 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC-CSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecc-cccchHHHHHHHHHHHHHhCcCCCcCC
Confidence            4457789999999999999999999988888999998863 234456677889999999999999974

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.12  E-value=3.2e-10  Score=66.00  Aligned_cols=67  Identities=24%  Similarity=0.273  Sum_probs=57.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++|.+.+.||+|+||.||++.+...+..+++|.+.... ........+.+|+.++..++||||++
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   76 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA   76 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCC
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcce
Confidence            45678999999999999999999988888999999987532 24456678899999999999999984

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.11  E-value=4.4e-10  Score=67.25  Aligned_cols=66  Identities=38%  Similarity=0.661  Sum_probs=49.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..+. |+||++
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   73 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN   73 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCe
Confidence            467899999999999999999999888999999988754445667788899999999996 999974

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.10  E-value=1e-09  Score=63.32  Aligned_cols=63  Identities=27%  Similarity=0.403  Sum_probs=53.5

Q ss_pred             ecceEEeeeecccCceEEEEEE----ECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.    ....+..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~   75 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK   75 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            4679999999999999999998    445677899998874  34566778999999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.10  E-value=9.2e-11  Score=72.06  Aligned_cols=66  Identities=27%  Similarity=0.407  Sum_probs=55.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++.+++||||++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   85 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK   85 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCe
Confidence            567899999999999999999999888999999988642222234567899999999999999984

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.09  E-value=1.4e-09  Score=63.45  Aligned_cols=63  Identities=25%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++..  .+..+++|.+..........+.+.+|+.++.+++|+||++
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   98 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL   98 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            56899999999999999999986  4678999988754445566788999999999999999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.08  E-value=7.2e-10  Score=64.67  Aligned_cols=65  Identities=25%  Similarity=0.260  Sum_probs=53.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....|.+.+.||+|+||.||++.+...+..+++|.+.... .....+.+.+|+.++..++|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~   71 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVK   71 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCcce
Confidence            4567999999999999999999998888999999887421 1223566789999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.08  E-value=3.2e-10  Score=66.94  Aligned_cols=66  Identities=33%  Similarity=0.466  Sum_probs=54.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++|+||++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   80 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   80 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCccc
Confidence            357899999999999999999999888999999988653333334456788999999999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.08  E-value=3.9e-10  Score=66.13  Aligned_cols=66  Identities=26%  Similarity=0.390  Sum_probs=52.3

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++|.+.+.||+|+||.||++.+...+..+++|.+.... .....+.+.+|+.++..++|+||++
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~   69 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVK   69 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCC
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc-ccchHHHHHHHHHHHHhCCCCCCCe
Confidence            35678999999999999999999998888999999876421 2233466889999999999999984

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.08  E-value=4.4e-10  Score=66.99  Aligned_cols=66  Identities=21%  Similarity=0.229  Sum_probs=54.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++....++..+++|.+......    ....+.+.+|+.++..++||||++
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~   79 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT   79 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCc
Confidence            456799999999999999999999888999999988753211    123567899999999999999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.08  E-value=1.4e-09  Score=62.65  Aligned_cols=63  Identities=24%  Similarity=0.206  Sum_probs=54.9

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|.+.+.||+|+||.||++.+...+..+++|.+..........+.+.+|+.++..++|+||++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   89 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR   89 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            488889999999999999999888889999988754445667888999999999999999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.08  E-value=2.8e-10  Score=65.56  Aligned_cols=63  Identities=25%  Similarity=0.456  Sum_probs=51.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.. ..+..+++|.+............+.+|+.++..++||||++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK   64 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCC
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEee
Confidence            5799999999999999999998 66788999988743222233466789999999999999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.08  E-value=6.7e-10  Score=64.21  Aligned_cols=66  Identities=29%  Similarity=0.427  Sum_probs=50.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC------------------------HHHHHHHHHHHHHH
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN------------------------VTHAKRAYREFKLM   84 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------~~~~~~~~~e~~~l   84 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+......                        ....+.+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            357899999999999999999998888899999987642111                        11235688999999


Q ss_pred             hhCCCCCCCC
Q psy3070          85 KLVNHKNVSH   94 (94)
Q Consensus        85 ~~l~~~~iv~   94 (94)
                      ..++|+||++
T Consensus        91 ~~l~h~~iv~  100 (298)
T 2zv2_A           91 KKLDHPNVVK  100 (298)
T ss_dssp             HTCCCTTBCC
T ss_pred             HhCCCCCCCe
Confidence            9999999974

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.07  E-value=1.1e-09  Score=65.77  Aligned_cols=65  Identities=22%  Similarity=0.330  Sum_probs=55.2

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.|.+.+.||+|+||.||++....++..+++|.+..  ........+.+|+.++..++|+||++
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~  112 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT--PYPLDKYTVKNEISIMNQLHHPKLIN  112 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--CSHHHHHHHHHHHHHHTTCCSTTBCC
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecc--cchhhHHHHHHHHHHHHhCCCcCCCe
Confidence            345789999999999999999999988888999998874  23445567899999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.06  E-value=6.1e-10  Score=64.13  Aligned_cols=63  Identities=24%  Similarity=0.347  Sum_probs=54.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|.||.||++.....+..+++|.+..   .....+.+.+|+.++..++|+||++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~   66 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVR   66 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHH
Confidence            45689999999999999999999888889999998863   3456678899999999999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.06  E-value=6.4e-10  Score=64.18  Aligned_cols=65  Identities=31%  Similarity=0.474  Sum_probs=50.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||.+.....+..+++|.+............+.+|+.++.+++|+||++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK   66 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCC
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeee
Confidence            46799999999999999999999888889999988743222233467889999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.06  E-value=1.8e-09  Score=62.64  Aligned_cols=68  Identities=26%  Similarity=0.310  Sum_probs=55.6

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....++|.+.+.||+|.||.||++.....+..+++|.+... .........+.+|+.++..++|+||++
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   96 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK   96 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            34567899999999999999999998788889999988742 234566788999999999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.06  E-value=3.7e-10  Score=69.53  Aligned_cols=66  Identities=29%  Similarity=0.439  Sum_probs=50.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+.++..++||||++
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  100 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK  100 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCe
Confidence            455799999999999999999999888889999988753222334567889999999999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.05  E-value=4.2e-10  Score=64.76  Aligned_cols=66  Identities=27%  Similarity=0.407  Sum_probs=55.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|++|.||++.....+..+++|.+............+.+|+.++.+++|+||++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   85 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK   85 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccE
Confidence            457899999999999999999999778889999988753333345677889999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.05  E-value=1e-09  Score=70.09  Aligned_cols=65  Identities=18%  Similarity=0.143  Sum_probs=49.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc----CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ----NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+|+|.+.+...    ..........++.++..++|||||+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~  256 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC  256 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence            5789999999999999999999999999999999875211    1112222334456677789999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.05  E-value=1.1e-09  Score=65.80  Aligned_cols=65  Identities=25%  Similarity=0.260  Sum_probs=53.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....|.+.+.||+|+||.||++.+...+..+++|.+.... .....+.+.+|+.++..++|+||++
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~   71 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVK   71 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCe
Confidence            4567999999999999999999998889999999887421 1223566789999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.05  E-value=2e-10  Score=68.03  Aligned_cols=68  Identities=18%  Similarity=0.225  Sum_probs=55.2

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.+.|.+.+.||+|+||.||++.+..++..+++|.+....   ......+.+.+|+.++..++||||++
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   90 (351)
T 3c0i_A           20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE   90 (351)
T ss_dssp             CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCc
Confidence            345678999999999999999999998889999999876321   11123567899999999999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.05  E-value=8.5e-10  Score=68.10  Aligned_cols=66  Identities=26%  Similarity=0.402  Sum_probs=51.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH-----------HHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV-----------THAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.....+..+++|.+.......           .....+.+|+.++..++||||++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  110 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK  110 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            4578999999999999999999998888899999887432111           23567899999999999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.05  E-value=2.1e-09  Score=63.67  Aligned_cols=65  Identities=18%  Similarity=0.218  Sum_probs=55.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+.... ........+..|..++..+ +||||++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~   74 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG   74 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCe
Confidence            568999999999999999999998888999999987542 3455677889999999887 8999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.04  E-value=1.9e-09  Score=62.68  Aligned_cols=63  Identities=22%  Similarity=0.285  Sum_probs=52.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~   90 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILR   90 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeee
Confidence            3579999999999999999999888889999998763  34566778999999999999999974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.04  E-value=1.6e-09  Score=62.24  Aligned_cols=66  Identities=26%  Similarity=0.239  Sum_probs=54.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc--CHHHH---HHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ--NVTHA---KRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~---~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+.....  .....   +.+.+|+.++..++|+||++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   87 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK   87 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchh
Confidence            35689999999999999999999988889999998864322  11111   67899999999999999974

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.03  E-value=2.6e-09  Score=62.66  Aligned_cols=64  Identities=30%  Similarity=0.321  Sum_probs=52.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+.   .+++|.+... ......+.+.+|+.++..++|+||++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~  114 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIR  114 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            4679999999999999999999864443   4999988742 34556778999999999999999974

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.03  E-value=8.8e-10  Score=64.67  Aligned_cols=66  Identities=21%  Similarity=0.257  Sum_probs=54.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++....++..+++|.+......    ....+.+.+|+.++..++||||++
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   78 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT   78 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            456799999999999999999999888999999987743211    123577899999999999999974

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.03  E-value=7.1e-10  Score=65.97  Aligned_cols=62  Identities=29%  Similarity=0.372  Sum_probs=52.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+....   .....+.+|+.++..++||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~   80 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVR   80 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCc
Confidence            467999999999999999999998889999999887422   22355789999999999999984

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.03  E-value=1e-09  Score=65.51  Aligned_cols=64  Identities=20%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+..+++|.+... ........+.+|+.+|..++||||++
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~  176 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVR  176 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            45799999999999999999999778889999988742 23455667899999999999999984

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.03  E-value=8.9e-10  Score=64.39  Aligned_cols=69  Identities=22%  Similarity=0.321  Sum_probs=56.4

Q ss_pred             eecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          21 EVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      ......+...++|.+.+.||+|+||.||++.+...+..+++|.+..     ...+.+.+|+.++..+. |+||++
T Consensus        26 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~   95 (330)
T 3nsz_A           26 ESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIIT   95 (330)
T ss_dssp             GGCCCCCEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCC
T ss_pred             hhhhhcccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEE
Confidence            3334455667889999999999999999999888889999998873     12456889999999996 999874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.02  E-value=1e-09  Score=64.07  Aligned_cols=66  Identities=23%  Similarity=0.238  Sum_probs=46.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+.   .+++|.+..........+.+.+|+.++..++|+||++
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   89 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK   89 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceeh
Confidence            35679999999999999999998755543   7899988753334456788999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.02  E-value=1.6e-09  Score=61.99  Aligned_cols=66  Identities=24%  Similarity=0.353  Sum_probs=55.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+............+.+|+..+..+ .||||++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~   75 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR   75 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCC
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeee
Confidence            45789999999999999999999988889999998875434445667888999999998 9999974

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.02  E-value=2.4e-09  Score=63.42  Aligned_cols=64  Identities=28%  Similarity=0.402  Sum_probs=53.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|...+.||+|+||.||++.....+..+++|.+..... .....+.+.+|+.++.+++||||++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  118 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ  118 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEee
Confidence            458999999999999999999888888999998874322 3345578899999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.02  E-value=5.8e-10  Score=68.44  Aligned_cols=67  Identities=28%  Similarity=0.436  Sum_probs=56.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.|.+.+.||+|+||.||++.....+..+++|.+.... ........+.+|+.++.+++||||++
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   90 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK   90 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCc
Confidence            45678999999999999999999998889999999886432 12335677899999999999999984

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.01  E-value=3.5e-09  Score=61.62  Aligned_cols=67  Identities=25%  Similarity=0.306  Sum_probs=55.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|.+.+.||+|.||.||++.+...+..+++|.+.... ......+.+.+|+.++..++|+||++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~   98 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP   98 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            34678999999999999999999988788899999887532 24455678999999999999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.01  E-value=4.6e-10  Score=67.47  Aligned_cols=65  Identities=20%  Similarity=0.444  Sum_probs=54.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||.+.....+..+++|.+.... ........+.+|+.++..++|||||+
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~   79 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN   79 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            568999999999999999999998889999999887421 11234567889999999999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.01  E-value=3.2e-09  Score=61.22  Aligned_cols=65  Identities=17%  Similarity=0.235  Sum_probs=55.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+.... ......+.+.+|+.++..+.|+||++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   79 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG   79 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            457999999999999999999998888899999876532 24456778899999999999999974

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.01  E-value=5.9e-10  Score=65.90  Aligned_cols=65  Identities=20%  Similarity=0.291  Sum_probs=53.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+.... ........+..|+.++..++||||++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   69 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA   69 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcc
Confidence            467999999999999999999998889999999887421 11234567889999999999999974

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.01  E-value=4.9e-10  Score=65.84  Aligned_cols=70  Identities=29%  Similarity=0.425  Sum_probs=56.8

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....+..+|.+.+.||+|+||.||++.....+..+++|.+....   ......+.+.+|+.++..++||||++
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   92 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR   92 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            33456678999999999999999999998888899999876421   13345678999999999999999984

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.01  E-value=4.5e-10  Score=66.40  Aligned_cols=66  Identities=30%  Similarity=0.372  Sum_probs=53.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+..... .......+.+|+.++..++||||++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   73 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK   73 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCe
Confidence            46789999999999999999999988899999998773211 1112356889999999999999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.01  E-value=1.1e-09  Score=64.82  Aligned_cols=62  Identities=23%  Similarity=0.319  Sum_probs=46.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+...+..+++|.+...    ...+.+.+|+.++.+++|+||++
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~  112 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIK  112 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcc
Confidence            456799999999999999999999888889999988742    23456788999999999999974

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.00  E-value=1.7e-09  Score=62.44  Aligned_cols=66  Identities=17%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ....+.|.+.+.||+|+||.||++.+...+..+++|.+...  .....+.+..|+.++..++||||++
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~   80 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVK   80 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEee
Confidence            44567899999999999999999999888889999987742  2334567889999999999999974

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.00  E-value=3.7e-09  Score=62.17  Aligned_cols=65  Identities=17%  Similarity=0.235  Sum_probs=55.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+.... ......+.+.+|+.++..+.|+||++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~  105 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG  105 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            457999999999999999999998888899999877532 24456778899999999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.99  E-value=4.4e-09  Score=62.86  Aligned_cols=62  Identities=23%  Similarity=0.328  Sum_probs=46.5

Q ss_pred             cceEE--eeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQN--LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~--~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|.+  .+.||+|+||.||++.....+..+++|.+..  ......+.+.+|+.++.+++|+||++
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~  150 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQ  150 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEEC--CSHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcc--cccccHHHHHHHHHHHHhCCCCCCCe
Confidence            34544  5789999999999999888889999998874  23456678999999999999999984

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.99  E-value=2.1e-09  Score=62.33  Aligned_cols=64  Identities=22%  Similarity=0.281  Sum_probs=51.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.....+..+++|.+...  .......+.+|+.++..++|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~   70 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS--PAFRDSSLENEIAVLKKIKHENIVT   70 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc--cccchHHHHHHHHHHHhCCCCCeee
Confidence            456899999999999999999999888889999988742  2233456889999999999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.99  E-value=2e-09  Score=61.78  Aligned_cols=62  Identities=21%  Similarity=0.261  Sum_probs=53.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|++|.||++.+...+..+++|.+..   .....+.+.+|+.++..++|+||++
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~   73 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQ   73 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS---CSTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc---CHHHHHHHHHHHHHHHhCCCCCEee
Confidence            5679999999999999999999988888999998873   3345678899999999999999974

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.98  E-value=4.1e-09  Score=62.81  Aligned_cols=64  Identities=22%  Similarity=0.255  Sum_probs=51.5

Q ss_pred             ecceEEeeeecccCceEEEEEEE-----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++..     ...+..+++|.+.. .........+.+|+.++..++|+||++
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~  138 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVR  138 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCe
Confidence            46799999999999999999984     33456799998863 234556677899999999999999984

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.98  E-value=1e-09  Score=62.39  Aligned_cols=63  Identities=14%  Similarity=0.175  Sum_probs=53.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.  +..+++|.+..........+.+.+|+.++..++|+||++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   71 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP   71 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEEC
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhh
Confidence            568999999999999999999983  778999988754445566788999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.98  E-value=8.2e-10  Score=64.02  Aligned_cols=63  Identities=30%  Similarity=0.438  Sum_probs=52.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+....  ....+.+.+|+.++..++||||++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~   81 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVN   81 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCe
Confidence            567999999999999999999988888999999876422  123456889999999999999984

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.98  E-value=1.4e-09  Score=62.64  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=54.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.....+..+++|.+.... .....+.+.+|+.++..++||||++
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~   84 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIK   84 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHh
Confidence            4567999999999999999999998888899999877432 2224567889999999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.97  E-value=5e-09  Score=61.98  Aligned_cols=67  Identities=15%  Similarity=0.240  Sum_probs=55.4

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-----CCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-----HKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~iv~   94 (94)
                      ....+.++|.+.+.||+|+||.||++.+...+..+++|.+..   .......+..|+.++..+.     |+||++
T Consensus        29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            334456789999999999999999999988888999998873   3456667788999999886     888874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.97  E-value=2.7e-09  Score=60.90  Aligned_cols=65  Identities=26%  Similarity=0.396  Sum_probs=54.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|++|.||++.....+..+++|.+.... .....+.+.+|+.++..++|+||++
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~   69 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVK   69 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCcee
Confidence            4578999999999999999999998788899999876422 2345678899999999999999974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.97  E-value=2.6e-09  Score=64.69  Aligned_cols=65  Identities=29%  Similarity=0.359  Sum_probs=51.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc------CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ------NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+.+.||+|+||.||++.+..++..+++|.+.....      .......+.+|+.++.+++||||++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  204 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK  204 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEee
Confidence            4679999999999999999999988889999998774211      1122345789999999999999984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.97  E-value=1.4e-09  Score=67.19  Aligned_cols=62  Identities=21%  Similarity=0.246  Sum_probs=52.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+...   ....+.+.+|+.+|.+++|+||++
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~  280 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQ  280 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS---SSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc---ccchHHHHHHHHHHHhcCCCCEee
Confidence            45799999999999999999998777889999998742   223567899999999999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.97  E-value=9e-10  Score=64.60  Aligned_cols=65  Identities=20%  Similarity=0.334  Sum_probs=53.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+..... .....+.+..|..++..++||||++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~   70 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR   70 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCC
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCce
Confidence            4689999999999999999999988899999998874211 1123566788999999999999974

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.96  E-value=4.2e-09  Score=61.18  Aligned_cols=65  Identities=23%  Similarity=0.146  Sum_probs=50.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECC---CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+.+.||+|+||.||++....   .+..+++|.+..........+.+.+|+.++.+++|+||++
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~  100 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR  100 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeee
Confidence            4679999999999999999997643   3447899988754445566788999999999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.96  E-value=6e-10  Score=65.08  Aligned_cols=64  Identities=25%  Similarity=0.390  Sum_probs=39.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+.... .......+.+|+.++..++||||++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~   67 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVR   67 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCC
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcce
Confidence            457999999999999999999988888999999886422 2223456788999999999999984

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.96  E-value=1.5e-09  Score=64.87  Aligned_cols=62  Identities=21%  Similarity=0.315  Sum_probs=49.0

Q ss_pred             eecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.+.|++.+.||+|+||.||++.+.   .++..+|+|.+...    .....+.+|+.+|..+ .|||||+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~   84 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMG   84 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCC
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCce
Confidence            4567999999999999999999763   34567999987642    2234578899999988 7999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.96  E-value=6.3e-09  Score=60.87  Aligned_cols=63  Identities=19%  Similarity=0.294  Sum_probs=53.3

Q ss_pred             ecceEEeeeecccCceEEEEEE----ECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|++.+.||+|+||.||++.    ....+..+++|.+..  ......+.+.+|+.++.+++|+||++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~   88 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDFIVK   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS--CCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc--CCHHHHHHHHHHHHHHHhcCCCceeE
Confidence            4579999999999999999998    345677899998874  34556778999999999999999974

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.96  E-value=2.1e-09  Score=62.83  Aligned_cols=66  Identities=23%  Similarity=0.242  Sum_probs=54.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+...+..+++|.+......    ....+.+.+|+.++..+.|+||++
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   79 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT   79 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcce
Confidence            456799999999999999999999888899999987743211    123577899999999999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.95  E-value=4.3e-09  Score=62.13  Aligned_cols=64  Identities=33%  Similarity=0.399  Sum_probs=52.2

Q ss_pred             ecceEEeeeecccCceEEEEEEE-----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+     ...+..+++|.+... ......+.+.+|+.++.++ +||||++
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            46799999999999999999983     344568999988742 3445667899999999999 7899974

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.95  E-value=5.1e-09  Score=61.14  Aligned_cols=62  Identities=21%  Similarity=0.319  Sum_probs=53.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      .+|.+.+.||+|.||.||++.+...+..+++|.+..  ........+.+|+.++.++. |+||++
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~~h~~iv~   90 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS--NEEEKNRAIIQEVCFMKKLSGHPNIVQ   90 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHHHTTSTTBCC
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC--CchHHHHHHHHHHHHHHHhccCCChhh
Confidence            369999999999999999999988889999998753  34556678899999999995 999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.95  E-value=1.4e-09  Score=62.18  Aligned_cols=64  Identities=31%  Similarity=0.412  Sum_probs=53.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+...+..+++|.+....  ....+.+.+|+.++..++|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~   70 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIR   70 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEee
Confidence            4567999999999999999999998888889999877422  123567889999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.95  E-value=1.3e-09  Score=67.08  Aligned_cols=66  Identities=24%  Similarity=0.300  Sum_probs=54.4

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+..++..+++|.+..... .......+.+|+.++..++||||++
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~   80 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK   80 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCC
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            46789999999999999999999988899999998874211 1123467889999999999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.95  E-value=1.5e-09  Score=62.77  Aligned_cols=66  Identities=24%  Similarity=0.336  Sum_probs=53.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+....  ........+.+|+.++..++|+||++
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   70 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ   70 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeE
Confidence            4578999999999999999999988888899999887421  11235677899999999999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.95  E-value=2.7e-09  Score=61.14  Aligned_cols=65  Identities=20%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+......    ....+.+.+|+.++..++|+||++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   72 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT   72 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeee
Confidence            45799999999999999999999888889999987643211    123677899999999999999974

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.95  E-value=4.9e-09  Score=62.07  Aligned_cols=65  Identities=14%  Similarity=0.219  Sum_probs=55.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+... ......+.+.+|+.++..++|+||++
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   95 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVG   95 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCC
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEE
Confidence            356899999999999999999999888899999987742 24556778999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.95  E-value=1.3e-09  Score=64.76  Aligned_cols=66  Identities=18%  Similarity=0.332  Sum_probs=54.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++....++..+++|.+.... ........+.+|+.++..++||||++
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~  105 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK  105 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            4578999999999999999999998889999999887421 11123567889999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.95  E-value=3.1e-09  Score=62.09  Aligned_cols=66  Identities=30%  Similarity=0.370  Sum_probs=51.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc------CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ------NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+.....      .......+.+|+.++..++|+||++
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   79 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK   79 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCC
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCce
Confidence            45679999999999999999999988888999998874211      1123345789999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.94  E-value=6.7e-09  Score=62.39  Aligned_cols=63  Identities=21%  Similarity=0.243  Sum_probs=52.5

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC--CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN--HKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~iv~   94 (94)
                      ..|.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.  |+||++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~  120 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR  120 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEE
Confidence            35999999999999999999875 4788999988754445667788999999999985  588874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.94  E-value=3.9e-09  Score=60.16  Aligned_cols=61  Identities=23%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+. .+..+++|.+.....   ..+.+.+|+.++.+++|+||++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~   69 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ   69 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEee
Confidence            357999999999999999999984 566799998874322   2356889999999999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.94  E-value=7.4e-09  Score=59.44  Aligned_cols=65  Identities=15%  Similarity=0.175  Sum_probs=48.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+..+++|.+............+..+...+..+.||||++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~   70 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVT   70 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            46799999999999999999999888899999988743222233334444445577789999974

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.94  E-value=7.5e-09  Score=60.73  Aligned_cols=64  Identities=25%  Similarity=0.271  Sum_probs=52.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..     .+..+++|.+... ........+.+|+.++..++|+||++
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~  114 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVK  114 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            4679999999999999999998753     3367999988742 24456778999999999999999974

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.93  E-value=3.9e-09  Score=64.47  Aligned_cols=61  Identities=21%  Similarity=0.260  Sum_probs=51.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+. .+..+++|.+...   ....+.+.+|+.+|..++|+||++
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~  247 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVK  247 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTT---SBCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCC---CccHHHHHHHHHHHhhCCCCCEee
Confidence            457999999999999999999884 4667999988742   234678899999999999999984

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.93  E-value=5.8e-09  Score=60.78  Aligned_cols=65  Identities=22%  Similarity=0.303  Sum_probs=51.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+...+..+++|.+...............|+..+..+ .|+||++
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~  121 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR  121 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            3679999999999999999999988899999998775434445555666676666554 8999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.93  E-value=9.6e-09  Score=59.56  Aligned_cols=64  Identities=30%  Similarity=0.332  Sum_probs=52.5

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.     ..+..+++|.+... ......+.+.+|+.++..++||||++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~   90 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIK   90 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceee
Confidence            467999999999999999999862     33467899988742 34566788999999999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.93  E-value=2.2e-09  Score=61.45  Aligned_cols=66  Identities=21%  Similarity=0.311  Sum_probs=53.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||.|++|.||++.+...+..+++|.+..... .......+.+|+.++..++|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR   73 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            35789999999999999999999988888999998763211 1123456889999999999999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.93  E-value=1e-08  Score=60.45  Aligned_cols=64  Identities=20%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC--CCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH--KNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~iv~   94 (94)
                      ...|.+.+.||+|+||.||++.. ..+..+++|.+............+.+|+.++..++|  +||++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~   73 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR   73 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEE
Confidence            44699999999999999999987 457789999887544456677889999999999976  88874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.93  E-value=2.4e-09  Score=64.59  Aligned_cols=65  Identities=17%  Similarity=0.216  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+.+.. ........+..|..++.++ +||||++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~  117 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG  117 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCC
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            568999999999999999999998888899999987532 2334456678899998876 8999984

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.93  E-value=5.7e-09  Score=61.25  Aligned_cols=65  Identities=20%  Similarity=0.291  Sum_probs=46.6

Q ss_pred             ecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCccc--CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQ--NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++...   ..+..+++|.+.....  .......+.+|+.++..++|+||++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   85 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD   85 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccc
Confidence            568999999999999999999874   5678899998875321  2234566789999999999999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.92  E-value=1e-08  Score=59.96  Aligned_cols=63  Identities=27%  Similarity=0.383  Sum_probs=52.6

Q ss_pred             ecceEEeeeecccCceEEEEEEE----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYD----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||+|+||.||++..    ...+..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~  106 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK  106 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS--CCSHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            45699999999999999999983    45677899998874  33456678999999999999999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.92  E-value=6.7e-09  Score=59.84  Aligned_cols=65  Identities=20%  Similarity=0.229  Sum_probs=49.9

Q ss_pred             ecceEEee-eecccCceEEEEEEE--CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLK-PIGSGAQGIVCAAYD--TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~-~lg~g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+ .||+|+||.||++.+  ...+..+++|.+..........+.+.+|+.++..++|+||++
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   82 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR   82 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            45788887 999999999999954  455678999988753333345678999999999999999974

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.92  E-value=8.6e-09  Score=59.37  Aligned_cols=62  Identities=21%  Similarity=0.175  Sum_probs=52.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++...   ..+++|.+..........+.+.+|+.++..++|+||+.
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL   84 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            457999999999999999999763   34899988754456677788999999999999999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.92  E-value=9.7e-09  Score=60.09  Aligned_cols=66  Identities=21%  Similarity=0.260  Sum_probs=49.8

Q ss_pred             eeecceEEeeeecccCceEEEEEE-----ECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|.+.+.||.|+||.||++.     ....+..+++|.+.. .........+.+|+.++..+.|+||++
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVR   97 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecc-ccchhhHHHHHHHHHHHhhCCCCCCCe
Confidence            345789999999999999999998     334566899999863 234456678899999999999999974

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.92  E-value=2.9e-09  Score=63.29  Aligned_cols=66  Identities=20%  Similarity=0.282  Sum_probs=52.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+.... ........+..|..++..+ .||||++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~   88 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ   88 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceee
Confidence            3578999999999999999999998889999999887421 1223456678899999987 7999974

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.92  E-value=2.1e-09  Score=61.52  Aligned_cols=65  Identities=20%  Similarity=0.239  Sum_probs=52.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+..... .....+.+.+|+.++..++|+||++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   75 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE   75 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCC
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEe
Confidence            5679999999999999999999878888999998763211 1122467889999999999999974

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.91  E-value=9.5e-09  Score=59.46  Aligned_cols=66  Identities=23%  Similarity=0.270  Sum_probs=54.6

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...+.|.+.+.||+|+||.||++.....+..+++|.+.... .....+.+.+|+.++..+.|+||++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~   84 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTK   84 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            34567999999999999999999988888899999887432 2234677899999999999999974

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.91  E-value=9e-10  Score=67.07  Aligned_cols=65  Identities=20%  Similarity=0.300  Sum_probs=45.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+.... ........+..|+.++..++|+||++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~  212 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA  212 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCC
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEee
Confidence            467999999999999999999998889999999887421 23345567788999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.91  E-value=7.7e-10  Score=67.01  Aligned_cols=65  Identities=26%  Similarity=0.269  Sum_probs=52.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..++..+++|.+.+... .......+..|+.++..++||||++
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~  133 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ  133 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCC
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCe
Confidence            4689999999999999999999988889999998874110 1112234778999999999999984

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.91  E-value=3.5e-09  Score=60.47  Aligned_cols=66  Identities=24%  Similarity=0.294  Sum_probs=53.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|.+|.||.+.+...+..+++|.+..... .......+.+|+.++..++|+||++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   75 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK   75 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeE
Confidence            46789999999999999999999977888999998763211 1123457889999999999999974

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.91  E-value=6.5e-09  Score=59.16  Aligned_cols=61  Identities=23%  Similarity=0.269  Sum_probs=49.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+.++..++|+||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~   67 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVK   67 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEee
Confidence            467999999999999999999874 56678999887422   23356889999999999999974

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.91  E-value=5.6e-09  Score=61.10  Aligned_cols=60  Identities=20%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|++.+.||+|+||.||++...  +..+++|.+..   ..........|+.++.+++||||++
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~hpniv~   82 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQ   82 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECG---GGHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeec---CchHHHHHHHHHHHHhcCCCCCchh
Confidence            457999999999999999999874  67899998873   2234445566888899999999984

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.90  E-value=5.7e-09  Score=62.38  Aligned_cols=59  Identities=32%  Similarity=0.588  Sum_probs=48.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+..++..+|+|.+.....      ...+|+.++..++|+||++
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~   64 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIK   64 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCC
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccc
Confidence            4579999999999999999999988899999998764211      1236999999999999984

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.90  E-value=1.2e-08  Score=60.86  Aligned_cols=64  Identities=27%  Similarity=0.373  Sum_probs=51.5

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-------CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-------ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.       ..+..+++|.+... ......+.+.+|+.++..+ +||||++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~  151 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIIN  151 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCC
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            357999999999999999999863       23346899988742 3445677899999999999 8999984

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.90  E-value=1.7e-08  Score=57.92  Aligned_cols=64  Identities=20%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...   +..+++|.+... ......+.+.+|+.++..++||||++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~   80 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVK   80 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccce
Confidence            56899999999999999999987543   345888987632 34456778999999999999999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.90  E-value=6.8e-09  Score=59.39  Aligned_cols=61  Identities=23%  Similarity=0.324  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.. ..+..+++|.+....   ...+.+.+|+.++..++|+||++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~   72 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVR   72 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHhhhheeeecCCCCeEEEEEEE-cCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcce
Confidence            46799999999999999999987 456678999887422   23467889999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.90  E-value=5.4e-09  Score=61.72  Aligned_cols=65  Identities=35%  Similarity=0.450  Sum_probs=47.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC---HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN---VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..++..+++|.+......   ......+.+|+.++..++|+||++
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   76 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG   76 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCC
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCe
Confidence            56799999999999999999998888889999988742111   112346789999999999999974

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.89  E-value=7.1e-09  Score=63.35  Aligned_cols=61  Identities=21%  Similarity=0.214  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+.+.||+|+||.||++.+. .+..+++|.+....   ...+.+.+|+.+|.+++|+||++
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~  243 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQ  243 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEee
Confidence            357999999999999999999984 44579999887422   23467899999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.89  E-value=6.1e-09  Score=59.80  Aligned_cols=63  Identities=13%  Similarity=0.184  Sum_probs=51.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCC-------cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQ-------QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+       ..+++|.+..  ......+.+.+|+.++..++|+||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~   76 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--AHRNYSESFFEAASMMSKLSHKHLVL   76 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG--GGGGGHHHHHHHHHHHHTSCCTTBCC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc--ccHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            457999999999999999999876555       3588998763  23345677899999999999999974

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.89  E-value=4.5e-09  Score=62.81  Aligned_cols=64  Identities=23%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             ecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++...   ..+..+++|.+... ......+.+.+|+.++.+++|+||++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~  110 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIR  110 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            357899999999999999999864   34567999988742 24556778999999999999999974

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.89  E-value=7.5e-09  Score=59.32  Aligned_cols=61  Identities=26%  Similarity=0.267  Sum_probs=47.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||.+... .+..+++|.+.....   ..+.+.+|+.++..++|+||++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~   83 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQ   83 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEee
Confidence            467999999999999999999874 566799998874322   2356889999999999999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.88  E-value=7e-09  Score=61.81  Aligned_cols=57  Identities=25%  Similarity=0.357  Sum_probs=48.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+..   .......+.+|+.++..+.
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~   91 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVR   91 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHh
Confidence            45789999999999999999999888888999999873   3456677889999988875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.88  E-value=1.8e-09  Score=65.44  Aligned_cols=65  Identities=18%  Similarity=0.108  Sum_probs=52.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+.+.. ........+..|..++..++|+||++
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~  125 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQ  125 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCC
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeee
Confidence            568999999999999999999998889999999887421 11223345788999999999999974

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.88  E-value=5.7e-09  Score=61.18  Aligned_cols=64  Identities=27%  Similarity=0.344  Sum_probs=46.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcE----EEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..    +++|.+... ......+.+.+|+.++.+++|+||++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   81 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCR   81 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCC
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            56799999999999999999987655543    577776532 22344577899999999999999974

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.88  E-value=1.6e-08  Score=58.82  Aligned_cols=59  Identities=31%  Similarity=0.443  Sum_probs=49.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++...  +..+++|.+..    ....+.+.+|+.++.+++||||++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~   65 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVK   65 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCe
Confidence            457999999999999999999873  56799998873    235677899999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.88  E-value=1e-08  Score=59.07  Aligned_cols=68  Identities=16%  Similarity=0.283  Sum_probs=53.9

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc---C----HHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---N----VTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      ..+.++|.+.+.||+|.+|.||++.+...+..+++|.+.....   .    ....+.+.+|+.++.++. |+||++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~   88 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ   88 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            3457889999999999999999999988888999998864211   1    234567889999999995 999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.87  E-value=1.4e-08  Score=60.16  Aligned_cols=65  Identities=31%  Similarity=0.458  Sum_probs=52.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc---------cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF---------QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+. .+..+++|.+....         ......+.+.+|+.++..++|+||++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            4578999999999999999999874 47889999876421         12334578999999999999999974

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.87  E-value=8.6e-09  Score=64.21  Aligned_cols=61  Identities=21%  Similarity=0.214  Sum_probs=50.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+.+.||+|.||.||++.+. ....+++|.+....   ...+.+.+|+.+|..++|+||++
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~  326 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQ  326 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEee
Confidence            457999999999999999999984 44579999887422   23467899999999999999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.87  E-value=8.7e-09  Score=59.49  Aligned_cols=64  Identities=20%  Similarity=0.338  Sum_probs=50.3

Q ss_pred             ecceEEeeeecccCceEEEEEE----ECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAY----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|++.+.||+|+||.||++.    ....+..+++|.+... ......+.+.+|+.++..++|+||++
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   87 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE-SGGNHIADLKKEIEILRNLYHENIVK   87 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccc-ccchhHHHHHHHHHHHHhCCCCCeee
Confidence            4568999999999999999998    4456788999988742 12234577899999999999999974

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.87  E-value=3.3e-09  Score=66.72  Aligned_cols=65  Identities=26%  Similarity=0.337  Sum_probs=53.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+.... ........+.+|+.+|..++|+||++
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~  248 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS  248 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEee
Confidence            467999999999999999999998889999999887421 11123456789999999999999984

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.87  E-value=8.2e-09  Score=60.46  Aligned_cols=61  Identities=26%  Similarity=0.391  Sum_probs=50.6

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|+||.||++.....+..+++|.+....  ....+.+.+|+.++..++|+||++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~  106 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVE  106 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcce
Confidence            3777889999999999999987788999999887422  234566889999999999999974

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.87  E-value=3.9e-09  Score=66.04  Aligned_cols=65  Identities=23%  Similarity=0.222  Sum_probs=53.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+++|.+..... .......+..|+.++..++||||++
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~  249 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS  249 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEee
Confidence            4679999999999999999999988899999998874211 1123467889999999999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.87  E-value=2.2e-09  Score=64.31  Aligned_cols=66  Identities=26%  Similarity=0.242  Sum_probs=44.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHH-HhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKL-MKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~-l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.....+..+++|.+.+... .......+..|..+ +..++||||++
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~  103 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG  103 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCC
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            45789999999999999999999988889999999875322 23345566777776 45679999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.86  E-value=5.1e-10  Score=65.98  Aligned_cols=66  Identities=24%  Similarity=0.403  Sum_probs=53.3

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC------HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN------VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+......      ......+.+|+.++..++|+||++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~   93 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIK   93 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCC
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEee
Confidence            456899999999999999999998888999999988753211      113345678999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.86  E-value=1.1e-09  Score=64.18  Aligned_cols=63  Identities=25%  Similarity=0.346  Sum_probs=49.2

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.....+..+++|.+.... .......+.+|+.++..++|+||++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~   64 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVT   64 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCe
Confidence            57999999999999999999998888999999887421 1112224557999999999999974

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.86  E-value=4.5e-09  Score=60.33  Aligned_cols=65  Identities=20%  Similarity=0.295  Sum_probs=52.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.....+..+++|.+..... .......+.+|+.++..++|+||++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   78 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR   78 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEee
Confidence            5689999999999999999999987888899998763211 1112457889999999999999974

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.86  E-value=4.2e-09  Score=61.48  Aligned_cols=63  Identities=16%  Similarity=0.202  Sum_probs=52.6

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+ ..+..+++|.+...  .....+.+.+|+.++..++||||++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~   99 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVS   99 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCC
T ss_pred             HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEee
Confidence            457899999999999999999986 46788999987742  3345677899999999999999974

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.86  E-value=2.7e-08  Score=57.28  Aligned_cols=62  Identities=32%  Similarity=0.349  Sum_probs=49.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|...+.||+|+||.||++.+...+.   .+++|.+.. .......+.+.+|+.++..++|+||++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~   86 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLA   86 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc-cccHHHHHHHHHHHHHHHhCCCCCeee
Confidence            46777999999999999998643333   688998774 234456788999999999999999974

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.86  E-value=3.1e-08  Score=58.00  Aligned_cols=64  Identities=27%  Similarity=0.347  Sum_probs=52.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCc-----EEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQ-----NVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||.|+||.||++.....+.     .+++|.+... ......+.+.+|+.++..+ +||||++
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~  114 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMSHLGQHENIVN  114 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc-cChHHHHHHHHHHHHHHhhcCCCCeee
Confidence            4579999999999999999998755443     6899987742 2445677899999999999 8999974

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.86  E-value=2.4e-08  Score=58.59  Aligned_cols=64  Identities=28%  Similarity=0.383  Sum_probs=51.1

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-------CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-------ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.       ..+..+++|.+... ........+.+|+.++..+ +||||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~  105 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIIN  105 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEee
Confidence            467999999999999999999864       24567999988742 3445677899999999999 8999974

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.86  E-value=1.7e-08  Score=58.50  Aligned_cols=64  Identities=28%  Similarity=0.390  Sum_probs=52.0

Q ss_pred             ecceEEeeeecccCceEEEEEEE-----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++..     ...+..+++|.+... ......+.+.+|+.++.++ +||||++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~   91 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVN   91 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeee
Confidence            35799999999999999999984     244567999988742 3445668899999999999 9999974

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.86  E-value=2.7e-09  Score=61.99  Aligned_cols=70  Identities=23%  Similarity=0.190  Sum_probs=48.2

Q ss_pred             eeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH----HHHHHHHHHHHHHhhC----CCCCCCC
Q psy3070          25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV----THAKRAYREFKLMKLV----NHKNVSH   94 (94)
Q Consensus        25 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~e~~~l~~l----~~~~iv~   94 (94)
                      ....+.++|.+.+.||+|+||.||++.+...+..+++|.+.......    .....+..|+.++.++    .|+||++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~  102 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR  102 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence            33455678999999999999999999987888899999987532111    2334456788888887    8999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.86  E-value=1.9e-09  Score=65.34  Aligned_cols=59  Identities=31%  Similarity=0.416  Sum_probs=48.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...|.+.+.||+|+||.||++.+...+..+++|.+....      ....+|+.+|..++|+||++
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~  111 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVR  111 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCC
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccc
Confidence            346999999999999999999998888999999876421      11246999999999999984

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.85  E-value=7.4e-09  Score=60.43  Aligned_cols=63  Identities=21%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..+.|.+.+.||+|.||.||++.+...+..+++|.+...   ......+.+|+.++.++ .|+||++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~   85 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---GDEEEEIKQEINMLKKYSHHRNIAT   85 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SSTTHHHHHHHHHHHHHCCSTTBCC
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC---cccHHHHHHHHHHHHhccCCCCeee
Confidence            467899999999999999999999888889999987642   22345678899999998 8999874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.85  E-value=2e-09  Score=65.71  Aligned_cols=65  Identities=20%  Similarity=0.149  Sum_probs=51.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+..... .......+..|..++..++|+||++
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~  138 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITT  138 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCC
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            4689999999999999999999988888999998874110 1112234788999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.85  E-value=3.7e-09  Score=62.70  Aligned_cols=66  Identities=24%  Similarity=0.254  Sum_probs=52.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++....++..+++|.+..... .......+..|..++..+ +||||++
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~   82 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH   82 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCc
Confidence            35789999999999999999999988899999998874211 112345677888888876 9999974

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.85  E-value=1.4e-08  Score=57.64  Aligned_cols=61  Identities=23%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||.+... .+..+++|.+.....   ..+.+.+|+.++..++|+||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~   67 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ   67 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEee
Confidence            357999999999999999999884 566799998874322   2357889999999999999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.85  E-value=2.8e-08  Score=57.67  Aligned_cols=66  Identities=18%  Similarity=0.183  Sum_probs=43.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+...+..+++|.+............+..+..++..++|+||++
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~   88 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQ   88 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceee
Confidence            357899999999999999999999888889999988743222223333444445677789999974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.84  E-value=1.6e-08  Score=64.54  Aligned_cols=65  Identities=20%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECC-CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTA-TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||.|+||.||++.+.. .+..+++|.+... ........+..|+.++.+++||||++
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~  143 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQ  143 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCC
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCe
Confidence            34789999999999999999999864 5788999987642 34456678899999999999999984

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.84  E-value=1.7e-08  Score=58.81  Aligned_cols=64  Identities=20%  Similarity=0.298  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.     ..+..+++|.+... ........+.+|+.++..++|+||++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            467999999999999999998764     24567899988742 34456677899999999999999974

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.83  E-value=8.7e-09  Score=59.85  Aligned_cols=62  Identities=24%  Similarity=0.345  Sum_probs=46.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+.|.+.+.||+|+||.||++.+...+..+++|.+...    ...+.+.+|+.++..+.|+||++
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~   88 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVK   88 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT----SCCHHHHHHHHHHHTCCCTTBCC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch----HHHHHHHHHHHHHHhCCCCCCcc
Confidence            456799999999999999999999888899999988742    13456788999999999999974

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.82  E-value=3.3e-08  Score=58.12  Aligned_cols=64  Identities=23%  Similarity=0.201  Sum_probs=50.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCC----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQ----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.....+    ..+++|.+... ........+.+|+.++..++|+||++
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~  110 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIR  110 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            457899999999999999999864332    35899988742 24456678999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.82  E-value=3e-08  Score=57.98  Aligned_cols=64  Identities=19%  Similarity=0.306  Sum_probs=49.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHH-HHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK-LMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+++|.+... ........+..|+. ++..++|+||++
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~~~~~~~h~niv~   85 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST-VDEKEQKQLLMDLDVVMRSSDCPYIVQ   85 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC-CCHHHHHHHHHHHHHHHSSCCCTTBCC
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc-cCchHHHHHHHHHHHHHHcCCCCcEee
Confidence            46799999999999999999999888899999988742 23344555666666 666679999974

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.82  E-value=3.6e-08  Score=56.47  Aligned_cols=64  Identities=20%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...   +..+++|.+... ......+.+.+|+.++..++||||++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   77 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVK   77 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCC
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcce
Confidence            46799999999999999999986432   235899987742 24456788999999999999999974

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.82  E-value=9.5e-09  Score=58.77  Aligned_cols=60  Identities=27%  Similarity=0.382  Sum_probs=50.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +..+|.+.+.||+|+||.||++.+...+..+++|.+....      ..+.+|+.++..++|+||++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~   68 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVH   68 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCC
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEE
Confidence            4567999999999999999999997788899999887421      24568999999999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.81  E-value=1.1e-08  Score=59.45  Aligned_cols=64  Identities=25%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             eecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.+.|.+. +.||+|+||.||++.....+..+++|.+...  .......+.+|+.++.++ .|+||++
T Consensus        10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~h~~i~~   75 (316)
T 2ac3_A           10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVLE   75 (316)
T ss_dssp             TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC--SSCCHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC--cchhHHHHHHHHHHHHHhcCCCCeee
Confidence            45678885 7899999999999998888899999998742  223456788999999885 7999974

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.81  E-value=1.5e-08  Score=59.12  Aligned_cols=65  Identities=23%  Similarity=0.378  Sum_probs=51.1

Q ss_pred             eecce-EEeeeecccCceEEEEEEE----CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRY-QNLKPIGSGAQGIVCAAYD----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~-~~~~~lg~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +..+| .+.+.||+|+||.||++.+    ...+..+++|.+... ......+.+.+|+.++..++|+||++
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIK   97 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhh
Confidence            34444 9999999999999988764    235678999988742 34456788999999999999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.81  E-value=1.5e-08  Score=61.91  Aligned_cols=59  Identities=25%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++...  +..+++|.+...    ...+.+.+|+.+|.+++|+||++
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~  250 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQ  250 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSC----TTSHHHHHHHHHHHTCCCTTBCC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCc----hHHHHHHHHHHHHHhccCCCEEE
Confidence            467999999999999999999874  668999988742    14567899999999999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.80  E-value=1.4e-08  Score=59.63  Aligned_cols=64  Identities=27%  Similarity=0.344  Sum_probs=50.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcE----EEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..    +++|.+... ........+.+|+.++..++||||++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~   81 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCR   81 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCC
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeE
Confidence            46799999999999999999997666554    466766532 22335677889999999999999974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.80  E-value=1.6e-09  Score=64.69  Aligned_cols=64  Identities=9%  Similarity=0.009  Sum_probs=49.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHH---HhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKL---MKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~---l~~l~~~~iv   93 (94)
                      ...|.+.+.||+|+||.||++.+...+..+++|.+... .......+.+.+|+.+   +..++|||||
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv  139 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA  139 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHH
Confidence            45799999999999999999998778889999998743 2234566788999954   5555799875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.80  E-value=3.4e-08  Score=57.28  Aligned_cols=64  Identities=31%  Similarity=0.374  Sum_probs=51.5

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.     ..+..+++|.+... ........+.+|+.++..+ +|+||++
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            467999999999999999999842     34567999988742 3445667889999999999 7899974

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.80  E-value=5e-08  Score=58.36  Aligned_cols=64  Identities=30%  Similarity=0.383  Sum_probs=51.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-------CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-------QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...       +..+++|.+... ........+.+|+.++..+ +|+||++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~  139 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIIN  139 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhh
Confidence            46799999999999999999986322       246899988742 3455678899999999999 9999984

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.80  E-value=4.7e-08  Score=56.37  Aligned_cols=63  Identities=24%  Similarity=0.221  Sum_probs=49.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|.+.+.||+|+||.||++.....   ...+++|.+.. .......+.+.+|+.++.+++|+||++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~   90 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLS   90 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            3589999999999999999986432   23578888774 234556788999999999999999974

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.79  E-value=1.2e-08  Score=59.86  Aligned_cols=67  Identities=19%  Similarity=0.211  Sum_probs=53.8

Q ss_pred             eeecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          28 TILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+...|.+. +.||+|+||.||++.....+..+++|.+............+.+|+.++..+ .|+||++
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~   93 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN   93 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEE
Confidence            345667877 899999999999999988899999998875433334567789999999998 5699874

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.79  E-value=3.2e-08  Score=58.91  Aligned_cols=65  Identities=20%  Similarity=0.309  Sum_probs=52.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc--cC----HHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF--QN----VTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~----~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||.|++|.||++.+..++..+++|.+....  ..    ....+.+.+|+.++..+ .|+||++
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  164 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT  164 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            467999999999999999999997788999999876432  11    12356788999999998 8999974

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.79  E-value=3.3e-08  Score=56.27  Aligned_cols=63  Identities=22%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc--CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ--NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.  +..+++|.+.....  .....+.+.+|+.++..++|+||++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA   70 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            457999999999999999999873  67899998774211  1233577899999999999999974

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.79  E-value=1.7e-08  Score=58.04  Aligned_cols=60  Identities=28%  Similarity=0.398  Sum_probs=47.9

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |.....||+|+||.||++.+...+..+++|.+...  .....+.+.+|+.++..++|+||++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~   83 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQ   83 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEee
Confidence            44455899999999999998888889999987742  3345677899999999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.79  E-value=1.4e-08  Score=59.61  Aligned_cols=61  Identities=25%  Similarity=0.421  Sum_probs=49.8

Q ss_pred             eecceEEe---eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          29 ILKRYQNL---KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~---~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      +.+.|.+.   +.||+|+||.||++.+...+..+++|.+..     .....+.+|+.++..+. ||||++
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~   70 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVK   70 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeE
Confidence            34567765   789999999999999988889999998873     23456778999999996 999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.79  E-value=5.5e-08  Score=59.12  Aligned_cols=62  Identities=34%  Similarity=0.521  Sum_probs=49.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC------CCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV------NHKNVS   93 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv   93 (94)
                      +..+|.+.+.||+|+||.||++.+...+..+++|.+..   .......+..|+.++..+      .|+||+
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv  162 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVI  162 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBC
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEE
Confidence            35679999999999999999999988889999999873   344556677888877765      455765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.78  E-value=9.7e-08  Score=54.88  Aligned_cols=64  Identities=20%  Similarity=0.249  Sum_probs=50.9

Q ss_pred             ecceEEee-eecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLK-PIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~-~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+ .||+|+||.||++.+.  ..+..+++|.+... ......+.+.+|+.++..++|+||++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~   74 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVR   74 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeE
Confidence            45677776 9999999999999753  35667999988742 34556788999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.78  E-value=5.3e-09  Score=60.70  Aligned_cols=66  Identities=30%  Similarity=0.393  Sum_probs=47.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc---CHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---NVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.+...+..+++|.+.....   .......+.+|+.++..+   .|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~   78 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVR   78 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEE
Confidence            46789999999999999999999888889999998763211   111223455666666655   5999974

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.78  E-value=3.2e-09  Score=62.85  Aligned_cols=63  Identities=17%  Similarity=0.288  Sum_probs=49.9

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ...+.++|.+.+.||+|+||.||++.+..++..+++|.+.....      ....|+.++.++ .||||++
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~   80 (342)
T 2qr7_A           17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIIT   80 (342)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCC
T ss_pred             ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCe
Confidence            34567789999999999999999999988899999999875321      234677777776 7999974

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.78  E-value=4.1e-09  Score=62.24  Aligned_cols=64  Identities=23%  Similarity=0.335  Sum_probs=40.4

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ...++|.+.+.||+|+||.||++.+...+..+++|.+....   ........++..+..++|+||++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~   83 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQ   83 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCC
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCccc
Confidence            34678999999999999999999998888999999876321   12234566777788889999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.78  E-value=4e-08  Score=57.13  Aligned_cols=64  Identities=20%  Similarity=0.216  Sum_probs=52.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC--CCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN--HKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~iv~   94 (94)
                      ...|.+.+.||+|+||.||++.+. .+..+++|.+............+.+|+.++..+.  |+||++
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~   92 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR   92 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred             cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence            346999999999999999999874 5778999988754445667788999999999986  588874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.78  E-value=6.7e-09  Score=61.08  Aligned_cols=65  Identities=9%  Similarity=0.200  Sum_probs=52.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH---------------HHHHHHHHHHHHHhhCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV---------------THAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---------------~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      ...++|.+.+.||+|+||.||++..  .+..+++|.+.......               .....+.+|+.++..++|+||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            4568999999999999999999988  77889999877321110               112788999999999999999


Q ss_pred             CC
Q psy3070          93 SH   94 (94)
Q Consensus        93 v~   94 (94)
                      ++
T Consensus       106 ~~  107 (348)
T 2pml_X          106 LT  107 (348)
T ss_dssp             CC
T ss_pred             ce
Confidence            74

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.77  E-value=2.6e-08  Score=58.53  Aligned_cols=64  Identities=27%  Similarity=0.338  Sum_probs=48.8

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.     ..+..+++|.+... ........+.+|+.++..+ .||||++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~  113 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK-ADSSEREALMSELKMMTQLGSHENIVN  113 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccc-cCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            467999999999999999999862     24457899988742 2334557889999999999 8999974

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.77  E-value=5e-09  Score=61.42  Aligned_cols=62  Identities=21%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++.....+..+++|.+....    ....+..|+.++..+ .|+||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~~h~~i~~   69 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS----RAPQLHLEYRFYKQLGSGDGIPQ   69 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC----SSCCHHHHHHHHHHHCSCTTSCC
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc----chHHHHHHHHHHHHhhCCCCCCE
Confidence            4567999999999999999999988888999999876421    123577899999999 9999974

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.76  E-value=2.9e-08  Score=56.77  Aligned_cols=59  Identities=25%  Similarity=0.323  Sum_probs=48.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++...  +..+++|.+...    ...+.+.+|+.++..++|+||++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~   78 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQ   78 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEee
Confidence            468999999999999999999873  678999988742    24567899999999999999974

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.76  E-value=5.2e-08  Score=56.18  Aligned_cols=59  Identities=27%  Similarity=0.354  Sum_probs=46.7

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh--CCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL--VNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~--l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||++..  .+..+++|.+..     .....+..|.+++..  ++|+||++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~niv~   66 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILG   66 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHTCCCCTTBCC
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc-----ccchhhHHHHHHHHHhhccCcCeee
Confidence            456899999999999999999987  577899998763     233455667777666  79999974

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.75  E-value=4e-08  Score=58.25  Aligned_cols=56  Identities=29%  Similarity=0.325  Sum_probs=47.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      ..+|.+.+.||+|+||.||++.+...+..+++|.+..   .......+.+|+.++.++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~   73 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVN   73 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhh
Confidence            4679999999999999999999888889999999873   3445667888998888775

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.75  E-value=4.7e-09  Score=60.55  Aligned_cols=64  Identities=30%  Similarity=0.403  Sum_probs=37.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|++|.||++.....+..+++|.+.... .......+.+|+.++..++|+||++
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~   77 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVS   77 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCC
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEee
Confidence            467999999999999999999987778899999887421 2234567889999999999999974

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.75  E-value=8.3e-09  Score=61.36  Aligned_cols=66  Identities=18%  Similarity=0.215  Sum_probs=52.2

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.....+..+++|.+..... .......+..|..++..+ .|++|++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~   85 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ   85 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEee
Confidence            35789999999999999999999987888999998874211 112356678899999887 8999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.73  E-value=3.5e-08  Score=62.70  Aligned_cols=58  Identities=22%  Similarity=0.312  Sum_probs=46.8

Q ss_pred             eeecccCceEEEEEEE--CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYD--TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||+|.+  ...+..+++|.+..........+.+.+|+.+|.+++|+|||+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~  434 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR  434 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            4799999999999954  345567999988754334455678999999999999999984

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.73  E-value=5.3e-08  Score=57.96  Aligned_cols=63  Identities=11%  Similarity=0.182  Sum_probs=44.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhC--CCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLV--NHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l--~~~~iv   93 (94)
                      ..|.+.+.||+|+||.||++.+...+..+++|.+..... .....+.+..|+.++..+  +|||++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv  127 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEA  127 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC------
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhh
Confidence            358999999999999999999888889999999885332 334566777885544444  699976

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.72  E-value=3.7e-08  Score=56.54  Aligned_cols=65  Identities=23%  Similarity=0.303  Sum_probs=43.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-CCCc--EEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-ATQQ--NVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~--~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+. ..+.  .+++|.+.... ......+.+.+|+.++..++|+||++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   85 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR   85 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCccc
Confidence            457999999999999999999853 2333  57899877432 23356678999999999999999974

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.72  E-value=3.3e-08  Score=57.83  Aligned_cols=64  Identities=19%  Similarity=0.212  Sum_probs=48.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEE--EEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNV--AIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~--~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.....+..+  ++|.+... ........+.+|+.++.++ +||||++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~   90 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIIN   90 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCC
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhh
Confidence            468999999999999999999986666644  88877631 2334556789999999999 8999974

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.70  E-value=7.8e-09  Score=66.08  Aligned_cols=64  Identities=27%  Similarity=0.332  Sum_probs=52.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||.|+||.||++.+...+..+++|.+... ........+.+|+.++..++||||++
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~   76 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVS   76 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            46899999999999999999998788889999988742 34566788999999999999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.70  E-value=1.5e-08  Score=59.07  Aligned_cols=65  Identities=26%  Similarity=0.339  Sum_probs=46.9

Q ss_pred             ecceEEeeeecccCceEEEEEEEC-CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT-ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+. ..+..+++|.+............+.+|+.++..+   .|+||++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~   78 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR   78 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCC
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEe
Confidence            467999999999999999999984 5677899998764221111223445666666554   8999974

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.67  E-value=2e-07  Score=59.48  Aligned_cols=64  Identities=20%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC---CcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT---QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...   +..+++|.+.. .......+.+.+|+.++..++||||++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~  455 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEALTMRQFDHPHIVK  455 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSS-TTCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecc-cCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            35799999999999999999987533   34688888763 234456678999999999999999984

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.67  E-value=1.4e-08  Score=59.46  Aligned_cols=64  Identities=17%  Similarity=0.221  Sum_probs=48.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcE----EEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..+|.+.+.||+|+||.||++.+...+..    +++|.+... ........+.+|+.++..++|+||++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~   79 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK-SGRQSFQAVTDHMLAIGSLDHAHIVR   79 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT-TSCSCBCSCCHHHHHHHTCCCTTBCC
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc-ccHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            45799999999999999999998666554    677766532 11223345678899999999999984

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.66  E-value=9.1e-09  Score=60.09  Aligned_cols=63  Identities=21%  Similarity=0.260  Sum_probs=48.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.. ..+..+++|.+.... .......+.+|+.++..+.|+||++
T Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~   91 (326)
T 3uim_A           29 SDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLR   91 (326)
T ss_dssp             TTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred             hhccccceeEecCCCcEEEEEEe-cCCCEEEEEEecccc-CchHHHHHHHHHHHHHhccCCCccc
Confidence            56799999999999999999976 467789999887421 1112235889999999999999974

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.65  E-value=7.4e-08  Score=57.65  Aligned_cols=62  Identities=24%  Similarity=0.233  Sum_probs=48.8

Q ss_pred             ceEEeeeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|.+.+.||+|+||.||++......   ..+++|.+.. .......+.+.+|+.++.+++||||++
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~  154 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLS  154 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCS-CSCSHHHHHHHHHHTTSTTCCCTTBCC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCC-CCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            4778899999999999999864322   3578888764 234456788999999999999999974

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.64  E-value=1.1e-07  Score=55.09  Aligned_cols=59  Identities=25%  Similarity=0.430  Sum_probs=47.4

Q ss_pred             eecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHH-hhCCCCCCCC
Q psy3070          29 ILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~iv~   94 (94)
                      +.++|.+. +.||+|+||.||++.+...+..+++|.+..       ...+.+|+.++ ..+.|+||++
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~   75 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVR   75 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCC
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchh
Confidence            46678877 789999999999999988889999998863       13456788877 4569999974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.63  E-value=2e-07  Score=53.59  Aligned_cols=63  Identities=25%  Similarity=0.228  Sum_probs=51.0

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ..+.++|.+.+.||+|++|.||++.+...+..+++|.+....    ....+..|+.++..+.|++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i   67 (296)
T 3uzp_A            5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGI   67 (296)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS----SCCHHHHHHHHHHHHTTSTTC
T ss_pred             ceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc----chhHHHHHHHHHHHhhcCCCC
Confidence            345678999999999999999999988888999999876422    123478899999999887754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.62  E-value=1.6e-07  Score=56.59  Aligned_cols=59  Identities=25%  Similarity=0.376  Sum_probs=46.5

Q ss_pred             eecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh-CCCCCCCC
Q psy3070          29 ILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL-VNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~   94 (94)
                      +.++|.+. +.||.|+||.||++.+..++..+++|.+..   .    ..+.+|+.++.+ .+|+||++
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---~----~~~~~E~~~~~~~~~hp~iv~  119 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---C----PKARREVELHWRASQCPHIVR  119 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---S----HHHHHHHHHHHHHTTSTTBCC
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc---c----hhHHHHHHHHHHhcCCCCcce
Confidence            35667776 789999999999999988899999998863   1    345678877644 58999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.61  E-value=1.4e-07  Score=59.72  Aligned_cols=62  Identities=21%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             ceEEee-eecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLK-PIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~-~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.+.+ .||+|+||.||+|.+.  ..+..+++|.+... ......+.+.+|+.+|..++|+|||+
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~  400 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVR  400 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEee
Confidence            344454 7999999999999764  23456899998743 22345678999999999999999984

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.61  E-value=2.8e-07  Score=55.43  Aligned_cols=60  Identities=35%  Similarity=0.463  Sum_probs=45.5

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .....|.+.+.||+|+||.||++.+...+. +++|.+.....      ...+|+.++..++|+||++
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~   96 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVD   96 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCC
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcce
Confidence            345679999999999999999999865554 77776553211      1136899999999999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.61  E-value=5.3e-08  Score=58.62  Aligned_cols=61  Identities=23%  Similarity=0.302  Sum_probs=42.6

Q ss_pred             ecceEEe-eeecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNL-KPIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~-~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.|.+. +.||+|+||.||++...  ..+..+++|.+.....    ...+.+|+.+|..++|+||++
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~   82 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVIS   82 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeee
Confidence            4457764 57999999999999964  4567899998874321    235778999999999999984

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.60  E-value=9.4e-08  Score=55.02  Aligned_cols=62  Identities=24%  Similarity=0.350  Sum_probs=50.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +.++|.+.+.||+|++|.||++.+...+..+++|.+....    ....+.+|+.++..+ .|+++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~   70 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPN   70 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCC
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCe
Confidence            4567999999999999999999988888999999876321    223467888999888 7888763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.60  E-value=7.3e-08  Score=55.39  Aligned_cols=62  Identities=27%  Similarity=0.246  Sum_probs=45.9

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .+.++|.+.+.||+|+||.||++.+...+..+++|.+...    .....+..|+.++..+.|++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~~~~~i   67 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK----TKHPQLHIESKIYKMMQGGVGI   67 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTC
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc----ccchHHHHHHHHHHHhcCCCCC
Confidence            4567899999999999999999998888889999975532    2223477899999998877764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.58  E-value=1.5e-07  Score=54.94  Aligned_cols=61  Identities=25%  Similarity=0.380  Sum_probs=49.0

Q ss_pred             eeecceEEeeeecccCceEEEEEEE-CCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYD-TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   91 (94)
                      .+.++|.+.+.||+|+||.||++.+ ...+..+++|.+..   .......+.+|+.++..+.|++
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~   72 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTD   72 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcC
Confidence            3567899999999999999999987 45677899998873   3455677889999888876554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.57  E-value=2.4e-08  Score=58.67  Aligned_cols=62  Identities=19%  Similarity=0.195  Sum_probs=47.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc------CHHHHHHHHHHHHHHhhCC---------CCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ------NVTHAKRAYREFKLMKLVN---------HKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~---------~~~iv   93 (94)
                      .++|.+.+.||+|+||.||++.+  .+..+|+|.+.....      .....+.+.+|+.++..++         |+|++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            46789999999999999999987  568899998875321      1223467888888888775         77765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.56  E-value=2.9e-07  Score=53.96  Aligned_cols=58  Identities=22%  Similarity=0.297  Sum_probs=47.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh--CCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL--VNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~--l~~~~iv~   94 (94)
                      .++|.+.+.||+|.||.||++..  .+..+++|.+..     .....+..|..++..  ++|+||++
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~  100 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILG  100 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCC
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEE
Confidence            46899999999999999999987  477899998763     234567788888877  68999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.55  E-value=2.9e-08  Score=58.05  Aligned_cols=69  Identities=26%  Similarity=0.267  Sum_probs=51.4

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH----HHHHHHHHHHHHHhhCC--CCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV----THAKRAYREFKLMKLVN--HKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~e~~~l~~l~--~~~iv~   94 (94)
                      ...+.++|.+.+.||+|+||.||++.+...+..+++|.+.......    .....+..|+.++.++.  |+|+++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~  112 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR  112 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceE
Confidence            3445678999999999999999999988888899999877432111    12345667888898885  588864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.54  E-value=8.5e-08  Score=61.34  Aligned_cols=65  Identities=18%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...+..+|+|.+.... ........+..|..++..+ .|++|+.
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~  406 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ  406 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCC
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEE
Confidence            567999999999999999999998888899999887421 1123446678899999887 7888863

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.54  E-value=2.1e-07  Score=53.85  Aligned_cols=60  Identities=25%  Similarity=0.353  Sum_probs=47.4

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |...+.||+|+||.||++..  .+..+++|.+....  ......+.+.+|+.++..++||||++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   94 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE   94 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEE
Confidence            33448999999999999986  46789999876421  23345778999999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.53  E-value=3.5e-07  Score=54.66  Aligned_cols=62  Identities=34%  Similarity=0.462  Sum_probs=49.5

Q ss_pred             eeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC-CCC
Q psy3070          27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN-HKN   91 (94)
Q Consensus        27 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~   91 (94)
                      ..+.++|.+.+.||+|+||.||++.+...+..+++|.+..   .......+..|+.++..+. |++
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~  112 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDT  112 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhccc
Confidence            3456789999999999999999999988888999999873   3445666778888887763 443

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.53  E-value=2.7e-07  Score=54.22  Aligned_cols=60  Identities=25%  Similarity=0.373  Sum_probs=48.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCC-cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQ-QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   91 (94)
                      +.++|.+.+.||+|+||.||++.....+ ..+++|.+..   .......+..|+.++..+.|++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~   77 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKD   77 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcC
Confidence            5678999999999999999999986555 6899998873   3456677888999888876544

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.53  E-value=4.1e-08  Score=58.02  Aligned_cols=56  Identities=16%  Similarity=0.188  Sum_probs=44.7

Q ss_pred             cceEEeeeecccCceEEEEEEECC--------CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTA--------TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ++|.+.+.||+|+||.||++....        .+..+++|.+...       +.+.+|+.++.+++|+||+
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv  105 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQV  105 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHH
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchh
Confidence            579999999999999999999865        3678999987732       3577889999988888764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.49  E-value=5e-07  Score=52.88  Aligned_cols=58  Identities=26%  Similarity=0.359  Sum_probs=43.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHH--hhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM--KLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l--~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++..  .+..+++|.+...     ....+..|..++  ..+.|+||++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~   71 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIAR   71 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhh
Confidence            56899999999999999999976  5678999987631     223344455444  4479999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.46  E-value=9.5e-07  Score=52.02  Aligned_cols=62  Identities=21%  Similarity=0.295  Sum_probs=45.5

Q ss_pred             eeeeecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHH-HHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK-LMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~iv~   94 (94)
                      .+.+.++|.+. +.||+|+||.||++.+...+..+++|.+..   ....    ..++. .+..+.|+||++
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~----~~e~~~~~~~~~h~~i~~   86 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD---SPKA----RQEVDHHWQASGGPHIVC   86 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES---SHHH----HHHHHHHHHHTTSTTBCC
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC---cHHH----HHHHHHHHHhcCCCChHH
Confidence            35567889985 479999999999999988899999998863   2222    22332 345568999874

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.45  E-value=6.8e-08  Score=57.30  Aligned_cols=65  Identities=18%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             ecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCccc--CHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPFQ--NVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++...   ..+..+++|.+.....  .......+..|+.++..+ +|+||++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~  123 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT  123 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCC
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeE
Confidence            368999999999999999999873   4678899998774211  112334567788899888 7999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.43  E-value=7.2e-07  Score=52.13  Aligned_cols=58  Identities=29%  Similarity=0.351  Sum_probs=44.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC--CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV--NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+.  +..+++|.+..     .....+..|.+++..+  .|+||++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~   95 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFT-----TEEASWFRETEIYQTVLMRHENILG   95 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEG-----GGHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEec-----cccchhhhHHHHHHHHhhcCCCeee
Confidence            468999999999999999999874  77899998763     1233445566665554  8999974

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.41  E-value=1.1e-06  Score=51.86  Aligned_cols=65  Identities=17%  Similarity=0.191  Sum_probs=42.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECC---CCcEEEEEecCCcccCH-H--------HHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRPFQNV-T--------HAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~-~--------~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..   .+..+++|.+....... .        ....+.+|+..+..+.|+||++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            3579999999999999999999865   66788999876421110 0        1123567888889999999974

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.41  E-value=9.3e-07  Score=53.82  Aligned_cols=59  Identities=25%  Similarity=0.259  Sum_probs=45.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+.|...+.||+|+||.||.+.. ..+..+|+|.+..     .....+.+|+.++..+ +||||++
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~-----~~~~~~~~E~~~l~~l~~HpnIv~   73 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIR   73 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEG-----GGHHHHHHHHHHHHHHTTSTTBCC
T ss_pred             hheeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcH-----HHHHHHHHHHHHHHhccCCCCcCe
Confidence            44577789999999999976544 5678999998763     2234578899999876 8999984

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.41  E-value=5e-07  Score=53.63  Aligned_cols=59  Identities=20%  Similarity=0.168  Sum_probs=43.7

Q ss_pred             ecceEEeeeecccCceEEEEEE-----ECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC---CCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAY-----DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN---HKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~iv   93 (94)
                      ...|.+.+.||+|+||.||++.     ....+..+++|.+...     ....+..|+.++..+.   |++++
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv  130 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFM  130 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBC
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhh
Confidence            3569999999999999999994     4566778999988742     2345677777777775   77776

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.38  E-value=1.3e-06  Score=54.10  Aligned_cols=60  Identities=20%  Similarity=0.249  Sum_probs=47.9

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      +.++|.+.+.||+|.||.||++.+...+..+++|.+.....    ...+..|+.++..+.|.+.
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~   64 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTG   64 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTT
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCC
Confidence            45789999999999999999999888889999997664221    2246789999999976543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.37  E-value=3.7e-08  Score=57.25  Aligned_cols=62  Identities=24%  Similarity=0.221  Sum_probs=47.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....   .+++|.+..........+.+.+|+.++..++|+||++
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   93 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL   93 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCC
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeE
Confidence            5679999999999999999998743   3788887643222233455678899999999999974

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.35  E-value=4.8e-06  Score=48.18  Aligned_cols=58  Identities=16%  Similarity=0.163  Sum_probs=43.2

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCH----------------HHHHHHHHHHHHHhhCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNV----------------THAKRAYREFKLMKLVNHKN   91 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------~~~~~~~~e~~~l~~l~~~~   91 (94)
                      |.+.+.||.|++|.||++.+ ..+..+++|.+.......                .....+.+|+.++.+++|.+
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~  165 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA  165 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCC
Confidence            34459999999999999998 778899999886421111                24567899999999987433

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.33  E-value=1.3e-06  Score=52.89  Aligned_cols=59  Identities=12%  Similarity=0.035  Sum_probs=46.0

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCc-ccCHHHHHHHHHHHHHHhhCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNH   89 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~e~~~l~~l~~   89 (94)
                      ..|...+.||+|+||.||++.+..++..+|+|.+... .......+.+.+|+.++..+.|
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3578889999999999999998888999999987742 2222345678899998888876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.30  E-value=1.7e-06  Score=51.35  Aligned_cols=65  Identities=14%  Similarity=0.149  Sum_probs=44.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCH-HH--------HHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNV-TH--------AKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~-~~--------~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+...     +..+++|.+....... ..        ...+..++..+..+.|+||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34899999999999999999987543     4678999876421100 01        112345556677788999974

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.23  E-value=7.4e-07  Score=54.33  Aligned_cols=57  Identities=25%  Similarity=0.322  Sum_probs=43.3

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      +|...+.||+|+||.|+.... ..+..+|+|.+....     ...+.+|+.++..+ .||||++
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~   82 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPEC-----FSFADREVQLLRESDEHPNVIR   82 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTT-----EEECHHHHHHHHHSCCCTTBCC
T ss_pred             EEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCcCe
Confidence            588999999999999664333 467889999886421     12246799999998 8999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.19  E-value=3.4e-06  Score=48.14  Aligned_cols=60  Identities=15%  Similarity=0.052  Sum_probs=43.8

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcE--EEEEecCCcccC----------------------HHHHHHHHHHHHHHhhCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQN--VAIKKLSRPFQN----------------------VTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~--~~~k~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~   88 (94)
                      |.+.+.||+|+||.||++.....+..  +++|.+......                      .....++.+|+.++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999987566778  999986532111                      012346889999998887


Q ss_pred             CCCC
Q psy3070          89 HKNV   92 (94)
Q Consensus        89 ~~~i   92 (94)
                      |+++
T Consensus       129 ~~~i  132 (258)
T 1zth_A          129 EAGV  132 (258)
T ss_dssp             HTTC
T ss_pred             hCCC
Confidence            6654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.93  E-value=2.3e-05  Score=49.18  Aligned_cols=58  Identities=21%  Similarity=0.181  Sum_probs=35.5

Q ss_pred             EEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CH-----HHHHHHHHHHHHHhhCCCCCCC
Q psy3070          34 QNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NV-----THAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        34 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~-----~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      ...+.||+|+||.||++..  .+..+++|....... ..     ...+.+.+|+.++.+++|+||+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv  402 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP  402 (540)
T ss_dssp             ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCC
T ss_pred             CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcC
Confidence            3457899999999999954  456677776443211 11     2345689999999999999998

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.44  E-value=0.00052  Score=41.79  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=28.5

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS   65 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~   65 (94)
                      |.+...||.|.+|.||.+.. ..+..+|+|.+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r  128 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHR  128 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEEC
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEe
Confidence            78999999999999999987 568889999765

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.21  E-value=0.0052  Score=38.10  Aligned_cols=51  Identities=6%  Similarity=-0.128  Sum_probs=7.4

Q ss_pred             ceEEEEEEECCCCcEEEE------EecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          44 QGIVCAAYDTATQQNVAI------KKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        44 ~~~v~~~~~~~~~~~~~~------k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ||.||.+.+......+++      |..............+.++..++..++|+|+++
T Consensus       152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~  208 (463)
T 3cxl_A          152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEK  208 (463)
T ss_dssp             BCCC---------CCBGGGC-----------------------------------CB
T ss_pred             chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCC
Confidence            999999887433345555      443321223344567788888888889998863

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=90.42  E-value=0.35  Score=30.83  Aligned_cols=40  Identities=8%  Similarity=-0.022  Sum_probs=27.8

Q ss_pred             CCcEEEEEecCCcc----cC----HHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          55 TQQNVAIKKLSRPF----QN----VTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        55 ~~~~~~~k~~~~~~----~~----~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .+..+++|.+....    ..    ....+.+.+|+.+|.++ .|+||++
T Consensus       258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~  306 (569)
T 4azs_A          258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPA  306 (569)
T ss_dssp             ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCC
T ss_pred             ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeE
Confidence            35667888776421    11    23456799999999999 7999874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=86.15  E-value=3.2  Score=23.72  Aligned_cols=52  Identities=10%  Similarity=-0.080  Sum_probs=36.1

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV   87 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l   87 (94)
                      ......+|.|..+.+|+... .++..+.+|......  ......+..|...|..+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L   68 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA--PALDGLFRAEALGLDWL   68 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHH
T ss_pred             eEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHH
Confidence            45567889999999999987 567788899755321  11223467788877766

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=80.63  E-value=1.9  Score=24.17  Aligned_cols=55  Identities=15%  Similarity=0.216  Sum_probs=38.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN   88 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~   88 (94)
                      ...|.+...++.++.+.||+...  .+..+++|.......  .....+.+|+.++..+.
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~   67 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLE   67 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHT
T ss_pred             hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC--CCHHHHHHHHHHHHHHh
Confidence            45788888888888899998864  356789998763211  11235778888887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	94
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-25
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-22
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-21
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-12
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-09
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-09
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-06

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (234), Expect = 2e-25
 Identities = 61/76 (80%), Positives = 67/76 (88%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F++VEVGD+ FT+LKRYQNLKPIGSGAQGIVCAAYD    +NVAIKKLSRPFQN THAKR
Sbjct: 3  FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE  LMK VNHKN+
Sbjct: 63 AYRELVLMKCVNHKNI 78

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 3e-22
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  E+  T + + +RYQNL P+GSGA G VCAA+DT T   VA+KKLSRPFQ++ HAKR
Sbjct: 4  FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63

Query: 77 AYREFKLMKLVNHKNV 92
           YRE +L+K + H+NV
Sbjct: 64 TYRELRLLKHMKHENV 79

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 2e-21
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          F+  EV  T + +   Y++L+P+GSGA G VC+A D  T   VAIKKL RPFQ+   AKR
Sbjct: 4  FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 77 AYREFKLMKLVNHKNV 92
          AYRE +L+K + H+NV
Sbjct: 64 AYRELRLLKHMRHENV 79

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 4e-16
 Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 27 FTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          F +  RY NL  IG GA G+VC+AYD   +  VAIKK+  PF++ T+ +R  RE K++  
Sbjct: 4  FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLR 62

Query: 87 VNHKNV 92
            H+N+
Sbjct: 63 FRHENI 68

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (162), Expect = 2e-15
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          +++Y+ L+ IG G  G V  A +  T + VA+K++     +      A RE  L+K + H
Sbjct: 1  MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60

Query: 90 KNV 92
          KN+
Sbjct: 61 KNI 63

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.9 bits (160), Expect = 5e-15
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          +L  Y   + +G+GA G+V    + AT  N A K +  P ++    +   +E + M ++ 
Sbjct: 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLR 81

Query: 89 HKNV 92
          H  +
Sbjct: 82 HPTL 85

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 9e-15
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          + +Y+ L  IG G  G V  A    T Q VA+KK+    +       A RE K+++L+ H
Sbjct: 9  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 68

Query: 90 KNV 92
          +NV
Sbjct: 69 ENV 71

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 1e-14
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR 79
          V VGD K    K+Y   + IG GA G V  A D AT Q VAI++++   Q     +    
Sbjct: 13 VSVGDPK----KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIIN 66

Query: 80 EFKLMKLVNHKNV 92
          E  +M+   + N+
Sbjct: 67 EILVMRENKNPNI 79

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 65.1 bits (158), Expect = 1e-14
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 87
          ++   Y  L+ +GSGA G+V    + AT +    K ++ P+           E  +M  +
Sbjct: 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQL 83

Query: 88 NHKNV 92
          +H  +
Sbjct: 84 HHPKL 88

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 3e-14
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +Q ++ IG G  G+V  A +  T + VA+KK+    +       A RE  L+K +NH
Sbjct: 1  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 90 KNV 92
           N+
Sbjct: 61 PNI 63

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 62.8 bits (152), Expect = 5e-14
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 25 TKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKL 83
          T   +  RY+  + +G G    V  A D    ++VA+K L     ++ +   R  RE + 
Sbjct: 1  TPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN 60

Query: 84 MKLVNHKNV 92
             +NH  +
Sbjct: 61 AAALNHPAI 69

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.1 bits (153), Expect = 6e-14
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRP-FQNVTHAKRAYREFKLMKLVNH 89
          K + +L+ IG G+ G V  A D    + VAIKK+S    Q+    +   +E + ++ + H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 90 KNV 92
           N 
Sbjct: 75 PNT 77

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 2e-13
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF----QNVTHAKRAYREF 81
          +  +   Y   + +GSG   +V    + +T    A K + +      +     +   RE 
Sbjct: 5  QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64

Query: 82 KLMKLVNHKNV 92
           ++K + H NV
Sbjct: 65 SILKEIQHPNV 75

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.2 bits (147), Expect = 3e-13
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKR 76
          +H    G+       RY  ++ +G G    V  A D     +VA+K +     +  + + 
Sbjct: 1  YHPAFKGEP--YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEA 55

Query: 77 AYREFKLMKLVNHKNVSH 94
          A  E KL++ VN  + + 
Sbjct: 56 AEDEIKLLQRVNDADNTK 73

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.6 bits (146), Expect = 5e-13
 Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 30  LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVN 88
           L ++  +K +G+G+ G V       +  + A+K L +     +   +    E ++++ VN
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99

Query: 89  HKNVSH 94
              +  
Sbjct: 100 FPFLVK 105

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-12
 Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          + ++Y   + +G G  GIV    +T++++    K +     +    K   +E  ++ +  
Sbjct: 3  LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK---KEISILNIAR 59

Query: 89 HKNV 92
          H+N+
Sbjct: 60 HRNI 63

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.9 bits (142), Expect = 2e-12
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          I   Y     +G+GA   V  A D  TQ+ VAIK +++             E  ++  + 
Sbjct: 7  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIK 65

Query: 89 HKNV 92
          H N+
Sbjct: 66 HPNI 69

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 2e-12
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          ++ +  ++ +G GA G V  A +  T++ VA+K +    + V   +   +E  + K++NH
Sbjct: 4  VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLNH 62

Query: 90 KNV 92
          +NV
Sbjct: 63 ENV 65

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 2e-12
 Identities = 12/60 (20%), Positives = 24/60 (40%)

Query: 33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          Y+ L  IG+G+ G        +  + +  K+L          +    E  L++ + H N+
Sbjct: 6  YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 2e-12
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 11 SRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN 70
          S+++T+  T   G  +   +  Y + K IG+G+ G+V  A    + + VAIKK+ +    
Sbjct: 1  SKVTTVVATPGQGPDRPQEV-SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---- 55

Query: 71 VTHAKRAYREFKLMKLVNHKNV 92
              +   RE ++M+ ++H N+
Sbjct: 56 --DKRFKNRELQIMRKLDHCNI 75

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.4 bits (140), Expect = 2e-12
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          +++Y  L+ IG G  G+V  A +    +  A+KK+    ++        RE  ++K + H
Sbjct: 1  MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59

Query: 90 KNV 92
           N+
Sbjct: 60 SNI 62

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 3e-12
 Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           ++ +  +G+G  G+V       +   +A K +    +      +  RE +++   N   
Sbjct: 7  DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPY 65

Query: 92 V 92
          +
Sbjct: 66 I 66

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.8 bits (139), Expect = 5e-12
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVN 88
          L+ +Q L+ +G+G+ G V         +  A+K L +     +   +    E  ++ +V 
Sbjct: 3  LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62

Query: 89 HKNV 92
          H  +
Sbjct: 63 HPFI 66

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 8e-12
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLM 84
          ++  L+ ++  +P+G G  G V  A +  ++  +A+K L +   +      +  RE ++ 
Sbjct: 2  QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 60

Query: 85 KLVNHKNV 92
            + H N+
Sbjct: 61 SHLRHPNI 68

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 2e-11
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
           ++ +  +G GA G V  A +  T    A K +    ++    +    E  ++   +H N
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPN 70

Query: 92 V 92
          +
Sbjct: 71 I 71

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 2e-11
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVN 88
          +  +  LK +G G  G V    + AT +  A+K L +              E ++++   
Sbjct: 4  MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63

Query: 89 HKNV 92
          H  +
Sbjct: 64 HPFL 67

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHK 90
           ++  K +G G+   V  A + AT +  AIK L  R            RE  +M  ++H 
Sbjct: 9  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 91 NV 92
            
Sbjct: 69 FF 70

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.9 bits (134), Expect = 2e-11
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF----QNVTHAKRAYREFKLMK 85
          +  +   + IG G  G V       T +  A+K L +      Q  T A        L+ 
Sbjct: 3  MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 86 LVNHKNV 92
            +   +
Sbjct: 63 TGDCPFI 69

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 4e-11
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 36 LKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNV 92
          L  +G G    V  A D  T Q VAIKK+    ++       + A RE KL++ ++H N+
Sbjct: 3  LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 62

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 5e-11
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR----PFQNVTHAKRAYREFKLM 84
          +  +YQ    +GSG  G V +    +    VAIK + +     +  + +  R   E  L+
Sbjct: 2  LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 85 KLVNHKN 91
          K V+   
Sbjct: 62 KKVSSGF 68

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.5 bits (130), Expect = 6e-11
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          RY+  + IGSG+ G +    D A  + VAIK      ++     + + E K+ K++    
Sbjct: 8  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGV 63

Query: 92 V 92
           
Sbjct: 64 G 64

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 1e-10
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 20 VEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR 79
           E    ++     YQ ++ +G G    V  A +    + V +K L          K+  R
Sbjct: 24 YESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKR 78

Query: 80 EFKLMK-LVNHKNV 92
          E K+++ L    N+
Sbjct: 79 EIKILENLRGGPNI 92

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (127), Expect = 2e-10
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
                   +G G  G V           VA+K L     +    +   +E  +MK + H
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKH 72

Query: 90 KNV 92
           N+
Sbjct: 73 PNL 75

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.5 bits (125), Expect = 4e-10
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          +   Y+  + IG G+ G++    +    Q VAIK   R     + A +   E++  KL+ 
Sbjct: 3  VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR----SDAPQLRDEYRTYKLLA 58

Query: 89 HKN 91
             
Sbjct: 59 GCT 61

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-10
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 28 TILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-K 85
           I+  Y+   + +G G  G V   ++  TQ+  A+K L           +A RE +L  +
Sbjct: 8  AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWR 60

Query: 86 LVNHKNV 92
               ++
Sbjct: 61 ASQCPHI 67

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 8e-10
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          +  + ++ +G+G  G V   Y     + VA+K L +   +         E  LMK + H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS---PDAFLAEANLMKQLQHQ 68

Query: 91 NV 92
           +
Sbjct: 69 RL 70

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 9e-10
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 37 KPIGSGAQGIVCAAY--DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          K +GSG  G V   Y       + VA+K L     +         E  +M+ +++  +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 1e-09
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSR-PFQNVTHAKRAYREFK-LMKLV 87
          ++ +   K +G G+ G V  A    T Q  AIK L +         +    E + L    
Sbjct: 1  IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 88 NHKNV 92
           H  +
Sbjct: 61 EHPFL 65

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 24 DTKFTI-LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRA 77
          D K+     R    K +G+GA G V  A             VA+K L +P  ++T  +  
Sbjct: 15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTEREAL 73

Query: 78 YREFKLM-KLVNHKNV 92
            E K++  L NH N+
Sbjct: 74 MSELKVLSYLGNHMNI 89

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 1e-09
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 32 RYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          R+      IG G+   V    DT T   VA  +L       +  +R   E +++K + H 
Sbjct: 9  RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 68

Query: 91 N 91
          N
Sbjct: 69 N 69

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-09
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTAT-QQNVAIKKLSRPFQNVTHAKRAYREFKLMKL--- 86
          ++Y+ +  IG GA G V  A D     + VA+K++              RE  +++    
Sbjct: 7  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 87 VNHKNV 92
            H NV
Sbjct: 67 FEHPNV 72

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTA---TQQNVAIKKLSRP--FQNVTHAKRAYREFKLM 84
          ++ ++ LK +G+GA G V      +   T +  A+K L +    Q     +    E +++
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82

Query: 85 KLVNHKNV 92
          + +     
Sbjct: 83 EHIRQSPF 90

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 4e-09
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
               ++ IGSG  G+V   Y     + VAIK +     +    +    E ++M  ++H 
Sbjct: 5  SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMS---EEDFIEEAEVMMKLSHP 60

Query: 91 NV 92
           +
Sbjct: 61 KL 62

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 4e-09
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH 89
          +K  + L+ IG G  G V        +  VA+K +         A+    E  +M  + H
Sbjct: 6  MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND----ATAQAFLAEASVMTQLRH 59

Query: 90 KNV 92
           N+
Sbjct: 60 SNL 62

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 6e-09
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          K    LK +G+G  G+V        Q +VAIK +     +         E K+M  ++H+
Sbjct: 4  KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHE 59

Query: 91 NV 92
           +
Sbjct: 60 KL 61

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 7e-09
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 91
          +    + IGSG+ G V          +VA+K L+         +    E  +++   H N
Sbjct: 9  QITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65

Query: 92 V 92
          +
Sbjct: 66 I 66

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 8e-09
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQN---VAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          R +  + IG G  G V      + +     VAIK       +    ++  +E   M+  +
Sbjct: 8  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFD 66

Query: 89 HKNV 92
          H ++
Sbjct: 67 HPHI 70

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 8e-09
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 29 ILKR--YQNLKPIGSGAQGIVCAAYDTATQQNVAIK---KLSRPFQNVTHAKRAYREFKL 83
          ILK   ++ +K +GSGA G V         + V I    K  R   +    K    E  +
Sbjct: 5  ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64

Query: 84 MKLVNHKNV 92
          M  V++ +V
Sbjct: 65 MASVDNPHV 73

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAK-------RAYREFKLM 84
           Y+  + +G G   +V       T +  A+K +         A+          +E  ++
Sbjct: 4  NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 85 KLVNH 89
          + V+ 
Sbjct: 64 RKVSG 68

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAY---DTATQQNVAIKKLSR-PFQNVTHAKRAYREFKLMK 85
           K  + L+ +G G+ G+V        +    +VA+K L               RE   M 
Sbjct: 7  EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66

Query: 86 LVNHKNV 92
           ++H+N+
Sbjct: 67 SLDHRNL 73

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 90
          +  +    +G G  G V       T + VAIK L     +    +   +E ++MK + H+
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHE 72

Query: 91 NV 92
           +
Sbjct: 73 KL 74

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (110), Expect = 4e-08
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN---VAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          +   +  + IG+G  G VC+ +     +    VAIK L   +      +    E  +M  
Sbjct: 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-KQRRDFLSEASIMGQ 83

Query: 87 VNHKNV 92
           +H NV
Sbjct: 84 FDHPNV 89

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 4e-08
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 24  DTKFTI-LKRYQNLKPIGSGAQGIVCAAYDTATQQN-----VAIKKLSRPFQNVTHAKRA 77
           D K+    +  +  K +GSGA G V  A      +      VA+K L     + +  +  
Sbjct: 29  DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-SEREAL 87

Query: 78  YREFKLM-KLVNHKNV 92
             E K+M +L +H+N+
Sbjct: 88  MSELKMMTQLGSHENI 103

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-08
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 31 KRYQNLKPIGSGAQGIVCAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLMK 85
          ++    + +G G+ G+V         ++     VAIK +     ++        E  +MK
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMK 78

Query: 86 LVNHKNV 92
            N  +V
Sbjct: 79 EFNCHHV 85

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 2e-07
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 4  IGASSRMSRLSTMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYD---TATQQNVA 60
          I  S+    L      V +G +   +   +  +  IG G  G V           + + A
Sbjct: 4  IDLSALNPELVQAVQHVVIGPSSLIV--HFNEV--IGRGHFGCVYHGTLLDNDGKKIHCA 59

Query: 61 IKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +K L+R   ++    +   E  +MK  +H NV
Sbjct: 60 VKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNV 90

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 5e-07
 Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 32 RYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
            + ++ IG GA G V  A             VA+K L              RE  LM  
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-DMQADFQREAALMAE 72

Query: 87 VNHKN 91
           ++ N
Sbjct: 73 FDNPN 77

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 5e-07
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 24 DTKFTI-LKRYQNLKPIGSGAQGIVCAAYDTATQQN-------VAIKKLSRPFQNVTHAK 75
          D ++ +   R    KP+G GA G V  A      ++       VA+K L +         
Sbjct: 5  DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLS 63

Query: 76 RAYREFKLMK-LVNHKNV 92
              E ++MK +  HKN+
Sbjct: 64 DLISEMEMMKMIGKHKNI 81

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 6e-07
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 39 IGSGAQGIVCAAYD--TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV 92
          +G G  G V          Q +VAIK L +  +     +   RE ++M  +++  +
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYI 71

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 9e-07
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 5/64 (7%)

Query: 29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 88
          I +     + IG G  G V         + VA+K  S   +     +    E     ++ 
Sbjct: 1  IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFRE---AEIYQTVMLR 55

Query: 89 HKNV 92
          H+N+
Sbjct: 56 HENI 59

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 1e-06
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 32 RYQNLKPIGSGAQGIVCAAYD-----TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 86
          R +  KP+G GA G V  A       TAT + VA+K L     +  H         L+ +
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 87 VNHKNV 92
           +H NV
Sbjct: 74 GHHLNV 79

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 30 LKRYQNLKPIGSGAQGIVCAAYD--TATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KL 86
              +    IG G  G V  A       + + AIK++ + + +    +    E +++ KL
Sbjct: 9  WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKL 67

Query: 87 VNHKNV 92
           +H N+
Sbjct: 68 GHHPNI 73

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-06
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 11/78 (14%)

Query: 19 TVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQN----VAIKKLSRPFQNVTHA 74
          T E+  +  T  K       IG+G  G V       +       VAIK L   +      
Sbjct: 1  TTEIHPSCVTRQKV------IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQR 53

Query: 75 KRAYREFKLMKLVNHKNV 92
               E  +M   +H N+
Sbjct: 54 VDFLGEAGIMGQFSHHNI 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.63
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.63
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.63
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.55
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.49
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.48
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.48
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.47
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.47
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.45
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.45
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.44
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.44
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.43
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.42
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.42
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.41
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.4
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.4
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.4
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.39
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.39
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.38
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.37
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.37
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.35
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.35
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.34
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.34
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.34
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.33
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.33
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.33
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.33
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.31
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.29
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.29
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.28
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.27
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.24
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.23
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.22
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.22
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.2
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.19
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.17
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.16
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.16
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.15
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.14
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.14
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.12
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.1
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.1
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.04
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.98
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.88
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.86
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.41

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-15  Score=88.52  Aligned_cols=80  Identities=49%  Similarity=0.734  Sum_probs=64.9

Q ss_pred             cceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          15 TMFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|+..++....|++.++|.+.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+|..++|||||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~   81 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG   81 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeE
Confidence            35777888888899999999999999999999999999888999999998865456667788999999999999999984

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.2e-15  Score=87.39  Aligned_cols=79  Identities=77%  Similarity=1.141  Sum_probs=68.2

Q ss_pred             ceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          16 MFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|++..+++..+...++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++.+++|||||+
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~   80 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS   80 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeE
Confidence            5788888888888889999999999999999999999888999999998865455667778999999999999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.1e-15  Score=87.04  Aligned_cols=79  Identities=54%  Similarity=0.875  Sum_probs=69.5

Q ss_pred             ceeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          16 MFHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|+....+.+.|++.++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+|..++|+|+|+
T Consensus         3 ~~~~~~~~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~   81 (348)
T d2gfsa1           3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG   81 (348)
T ss_dssp             CEEEEECSSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcEEEecCCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeee
Confidence            4667778888899999999999999999999999999888999999999865455667778999999999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.1e-14  Score=81.30  Aligned_cols=65  Identities=18%  Similarity=0.250  Sum_probs=57.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   67 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR   67 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCC
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEee
Confidence            35799999999999999999999888999999998865455667788999999999999999985

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.49  E-value=1.6e-13  Score=77.68  Aligned_cols=67  Identities=24%  Similarity=0.267  Sum_probs=57.5

Q ss_pred             eeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          28 TILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        28 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+.++|.+.+.||+|+||.||++.+..++..+|+|.+.... ......+.+.+|+.++..++|||||+
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~   71 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA   71 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCc
Confidence            34567999999999999999999998889999999987543 34556778999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=5.5e-14  Score=80.41  Aligned_cols=64  Identities=31%  Similarity=0.467  Sum_probs=52.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~   65 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK   65 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCC
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEE
Confidence            5899999999999999999999888999999998743323334567899999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.3e-13  Score=78.38  Aligned_cols=64  Identities=31%  Similarity=0.469  Sum_probs=56.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+|..++|+||++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~   65 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR   65 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEe
Confidence            5799999999999999999999888999999998754444557788999999999999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=5.7e-14  Score=79.56  Aligned_cols=65  Identities=26%  Similarity=0.396  Sum_probs=52.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|++.+.||+|+||.||++.+..++..+|+|.+.... .....+.+.+|+.+|.+++|||||+
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~   67 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVK   67 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCC
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHhCCCCCEee
Confidence            4678999999999999999999998889999999987432 2234567899999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.9e-13  Score=79.00  Aligned_cols=63  Identities=21%  Similarity=0.393  Sum_probs=54.8

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||+|.+..++..+|+|.+..   .......+.+|+.+|..++|||||+
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~---~~~~~~~~~~Ei~il~~l~HpnIv~   65 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHRNILH   65 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---CTHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcC---CcccHHHHHHHHHHHHhCCCCCCCe
Confidence            56789999999999999999999988899999999884   2334566889999999999999985

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.45  E-value=3.3e-13  Score=78.78  Aligned_cols=64  Identities=23%  Similarity=0.397  Sum_probs=56.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.+..  ......+.+.+|+.+|.+++|||||+
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~--~~~~~~~~~~~E~~il~~l~HpnIv~   87 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQTMSVLRHPTLVN   87 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECC--CSHHHHHHHHHHHHHHHHTCCTTBCC
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcc--cchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            45789999999999999999999988899999999874  34456678899999999999999985

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.6e-13  Score=78.33  Aligned_cols=68  Identities=41%  Similarity=0.641  Sum_probs=55.6

Q ss_pred             eeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          26 KFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        26 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .|++.++|.+++.||+|+||.||+|.+..++..+|+|.+... ......+.+.+|+.+|.+++|||+++
T Consensus         3 ~~~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~Ei~il~~l~hp~iv~   70 (345)
T d1pmea_           3 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIG   70 (345)
T ss_dssp             CCCCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccCcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehh-cChHHHHHHHHHHHHHHHcCCCCCCc
Confidence            456677899999999999999999999888999999998742 24556778999999999999999974

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.3e-13  Score=77.69  Aligned_cols=66  Identities=21%  Similarity=0.254  Sum_probs=55.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc----CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ----NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+..++..+|+|.+.+...    .....+.+.+|+.+|.+++|||||+
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   77 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT   77 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCc
Confidence            34679999999999999999999988899999998875321    1224678899999999999999985

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.1e-13  Score=75.57  Aligned_cols=62  Identities=24%  Similarity=0.227  Sum_probs=53.7

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |+..+.||+|+||.||+|.+..++..+++|.+..........+.+.+|+.+|.+++|||||+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   72 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR   72 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            46777899999999999999888889999988754445667788999999999999999985

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.4e-13  Score=78.48  Aligned_cols=62  Identities=21%  Similarity=0.234  Sum_probs=53.2

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+..++..+|+|.+....   ...+.+.+|+.+|.+++|||||+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~---~~~~~~~~E~~il~~l~HpnIv~   77 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQ   77 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc---chHHHHHHHHHHHHhCCCCCEec
Confidence            357999999999999999999998888899999987432   23567899999999999999985

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=4.1e-13  Score=77.23  Aligned_cols=64  Identities=28%  Similarity=0.402  Sum_probs=54.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+..... .....+.+.+|+.+|.+++|||||+
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~   79 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ   79 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEee
Confidence            359999999999999999999988899999999875432 3345678999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.42  E-value=5.9e-13  Score=77.78  Aligned_cols=64  Identities=22%  Similarity=0.327  Sum_probs=55.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+..++..+|+|.+..  ........+.+|+.+|.+++|||||+
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~--~~~~~~~~~~~Ei~il~~l~HpnIv~   90 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT--PYPLDKYTVKNEISIMNQLHHPKLIN   90 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--CSHHHHHHHHHHHHHHTTCCSTTBCC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECC--cchhHHHHHHHHHHHHHhCCCCCCCc
Confidence            45679999999999999999999988899999999874  23445677889999999999999985

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.1e-13  Score=77.72  Aligned_cols=65  Identities=34%  Similarity=0.487  Sum_probs=53.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+|.+++|+|+++
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~   73 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   73 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccc
Confidence            57899999999999999999999888999999988754333345567889999999999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.5e-13  Score=77.44  Aligned_cols=62  Identities=19%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+...  .....+.+.+|+.+|.+++|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~   73 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVK   73 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--SSGGGGGTHHHHHHHHHCCCTTBCC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            4689999999999999999999888999999998742  3345567889999999999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.40  E-value=2.3e-13  Score=77.28  Aligned_cols=63  Identities=25%  Similarity=0.456  Sum_probs=52.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|.+ ..+..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~   64 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK   64 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCC
T ss_pred             CCceeccEEecCCCcEEEEEEe-CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEe
Confidence            5799999999999999999998 46788999998753333334577899999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.3e-13  Score=77.95  Aligned_cols=64  Identities=14%  Similarity=0.233  Sum_probs=55.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|.+..++..+|+|.+... ......+.+.+|+.+|..++|||||+
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~   68 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVG   68 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECC-CCTTHHHHHHHHGGGGGGCCCTTBCC
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChh-hCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            45799999999999999999999888999999998743 23345678899999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2.4e-13  Score=77.58  Aligned_cols=65  Identities=23%  Similarity=0.240  Sum_probs=54.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+.... ......+.+.+|+.+|.+++|||||+
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   72 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK   72 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCC
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeE
Confidence            367999999999999999999998889999999887421 11223467899999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.2e-13  Score=76.17  Aligned_cols=65  Identities=22%  Similarity=0.337  Sum_probs=54.1

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++.+..++..+|+|.+.... ........+.+|+.++.+++|||||+
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~   70 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR   70 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCe
Confidence            468999999999999999999998889999999887421 11223567889999999999999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=2.6e-13  Score=78.26  Aligned_cols=65  Identities=20%  Similarity=0.334  Sum_probs=54.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+.... ......+.+.+|+.+|..++|||||+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   68 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR   68 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCC
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhh
Confidence            467999999999999999999998889999999987421 11234567899999999999999985

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.37  E-value=4.1e-13  Score=77.16  Aligned_cols=65  Identities=26%  Similarity=0.273  Sum_probs=50.1

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.+.|.+.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+|.+++|||||+
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~   71 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVA   71 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCC
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh-hhHHHHHHHHHHHHHhCCCCCCCc
Confidence            45679999999999999999999988899999999875321 223456889999999999999985

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1e-12  Score=74.34  Aligned_cols=66  Identities=21%  Similarity=0.339  Sum_probs=53.3

Q ss_pred             eeeee-ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          25 TKFTI-LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        25 ~~~~~-~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.|++ .++|++.+.||+|+||.||+|.+ ..+..+|+|.+....   ...+.+.+|+.+|.+++|||||+
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~   72 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVR   72 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEE-CCCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeE
Confidence            34544 35799999999999999999997 456789999987422   23457899999999999999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.4e-13  Score=76.26  Aligned_cols=62  Identities=31%  Similarity=0.456  Sum_probs=52.9

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.+|++++|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~   81 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVN   81 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc--ChHHHHHHHHHHHHHhCCCCCEee
Confidence            46999999999999999999998889999999887432  123467899999999999999985

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=6.1e-13  Score=77.31  Aligned_cols=65  Identities=20%  Similarity=0.291  Sum_probs=54.6

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||++....++..+|+|.+.+.. ........+.+|+.+|.+++||||++
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~   69 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA   69 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCC
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            468999999999999999999998899999999987431 12234567889999999999999985

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.8e-12  Score=72.93  Aligned_cols=60  Identities=23%  Similarity=0.325  Sum_probs=50.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|.+. .+..+|+|.+....   ...+.+.+|+.++.+++|||||+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~---~~~~~~~~E~~~l~~l~HpnIv~   64 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQ   64 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCc---CcHHHHHHHHHHHHhcCCCCccc
Confidence            57899999999999999999884 55679999987432   23457899999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.34  E-value=4.2e-12  Score=71.97  Aligned_cols=66  Identities=17%  Similarity=0.298  Sum_probs=54.0

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc---C----HHHHHHHHHHHHHHhhCC-CCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ---N----VTHAKRAYREFKLMKLVN-HKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~~e~~~l~~l~-~~~iv~   94 (94)
                      |.++|.+.+.||+|+||.||++.+..++..+|+|.+.+...   .    ....+.+.+|+.++.+++ ||||++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~   74 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ   74 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence            45789999999999999999999988889999999875321   1    123456889999999996 999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=7.3e-13  Score=77.31  Aligned_cols=65  Identities=18%  Similarity=0.347  Sum_probs=54.3

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+++.||+|+||.||++.+..++..+|+|.+.... ......+.+.+|+.+|..++|||||+
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~  105 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK  105 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEee
Confidence            478999999999999999999998889999999887421 11234567899999999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=5.4e-12  Score=72.18  Aligned_cols=64  Identities=27%  Similarity=0.292  Sum_probs=50.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCc---EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+...+.   .+++|.+.. .......+.+.+|+.+|.+++|||||+
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~   91 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNVIH   91 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCS-SCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            4679999999999999999998765443   478887763 234556778999999999999999985

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.5e-12  Score=71.95  Aligned_cols=64  Identities=23%  Similarity=0.201  Sum_probs=50.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCC----cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQ----QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|...+.||+|+||.||+|.+...+    ..+|+|.+... ........+.+|+.++.+++|||||+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~H~nIv~   73 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIR   73 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc-cChHHHHHHHHHHHHHHhcCCCCEee
Confidence            457899999999999999999875443    36899988642 34455667999999999999999985

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.33  E-value=1.4e-12  Score=75.32  Aligned_cols=73  Identities=21%  Similarity=0.310  Sum_probs=58.0

Q ss_pred             eeeeeecCeeeeeecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          17 FHTVEVGDTKFTILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++........+...++|++.+.||+|+||.||+|.+..++..+|+|.+...     ..+.+.+|+.+|..+ .||||++
T Consensus        21 ~~~~~~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~   94 (328)
T d3bqca1          21 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIIT   94 (328)
T ss_dssp             HHCGGGCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCC
T ss_pred             cchhhhcccCCCCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcE
Confidence            344444444455567899999999999999999999888999999998741     245678999999998 5999974

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=8.3e-13  Score=74.23  Aligned_cols=60  Identities=27%  Similarity=0.284  Sum_probs=50.3

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||+|.+ ..+..+|+|.+....   ...+.+.+|+.++.+++|||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~Ev~~~~~l~HpnIv~   63 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQ   63 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSS---SCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCc---CCHHHHHHHHHHHHhcCCCceee
Confidence            4688889999999999999998 466789999887432   23457899999999999999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.4e-12  Score=73.45  Aligned_cols=63  Identities=27%  Similarity=0.355  Sum_probs=48.1

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCc----EEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQ----NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .+|++.+.||+|+||.||+|.+...+.    .+++|.+... ......+.+.+|+.++.+++|||||+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~   75 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCR   75 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            469999999999999999998765554    4788877632 22335677999999999999999985

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=2.3e-12  Score=73.01  Aligned_cols=62  Identities=21%  Similarity=0.175  Sum_probs=51.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|...   ..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~   68 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL   68 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            357899999999999999999753   35899998754445567788999999999999999985

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.4e-11  Score=69.58  Aligned_cols=63  Identities=21%  Similarity=0.223  Sum_probs=50.8

Q ss_pred             cceEEeeeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|.+...+   ..+++|.+.. .......+.+.+|+.+|.+++|||||+
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~   72 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEALTMRQFDHPHIVK   72 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT-TTSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecc-ccCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            57999999999999999999875432   3577887763 234556778999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5.9e-12  Score=71.64  Aligned_cols=61  Identities=21%  Similarity=0.214  Sum_probs=50.7

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+. ....+|+|.+....   ...+.+.+|+.+|.+++|+|||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~---~~~~~~~~E~~~l~~l~h~nIv~   76 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQ   76 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECccc---CCHHHHHHHHHHHHhcccCCEeE
Confidence            467999999999999999999885 44579999987432   23467899999999999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.28  E-value=1.4e-11  Score=70.46  Aligned_cols=64  Identities=25%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|....     .+..+|+|.+.. .......+.+.+|+.+|.+++|+||++
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~-~~~~~~~~~~~~E~~il~~l~h~niv~   80 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQREAALMAEFDNPNIVK   80 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCT-TCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEECh-hcChHHHHHHHHHHHHHHhcCCCCccc
Confidence            3579999999999999999998642     345799998874 234556778999999999999999974

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.8e-11  Score=68.83  Aligned_cols=63  Identities=21%  Similarity=0.251  Sum_probs=50.1

Q ss_pred             cceEEeee-ecccCceEEEEEEECC--CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          31 KRYQNLKP-IGSGAQGIVCAAYDTA--TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~-lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +++.+.+. ||+|+||.||+|.+..  .+..+|+|.+... ......+.+.+|+.+|.+++|||||+
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~   73 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVR   73 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            46777775 9999999999997643  3446899988742 34556788999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.3e-11  Score=69.45  Aligned_cols=59  Identities=25%  Similarity=0.323  Sum_probs=48.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|...  +..+|+|.+...    ...+.+.+|+.++.+++|||||+
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~----~~~~~~~~E~~~l~~l~HpnIv~   64 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQ   64 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH----HHHHHHHHHHHHHHhCCCCCEee
Confidence            357999999999999999999873  667999998742    24467899999999999999985

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1e-11  Score=70.79  Aligned_cols=60  Identities=33%  Similarity=0.397  Sum_probs=45.8

Q ss_pred             EeeeecccCceEEEEEEECCCCcEEEEEecCCcccC---HHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          35 NLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN---VTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        35 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++.||+|+||.||+|.+..++..+|+|.+......   ....+.+.+|+.+|..++|||||+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~   64 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG   64 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            357899999999999999888999999998753211   122356889999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.5e-11  Score=69.49  Aligned_cols=65  Identities=25%  Similarity=0.299  Sum_probs=43.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECC-CC--cEEEEEecCCcc-cCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTA-TQ--QNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~--~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|.... .+  ..+|+|.+.... ......+.+.+|+.+|.+++|||||+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~   75 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR   75 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            4579999999999999999998532 22  257899887532 23345678999999999999999985

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.8e-11  Score=69.31  Aligned_cols=58  Identities=22%  Similarity=0.311  Sum_probs=44.4

Q ss_pred             eeecccCceEEEEEEEC--CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          37 KPIGSGAQGIVCAAYDT--ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        37 ~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +.||+|+||.||+|.+.  ..+..+|+|.+..........+.+.+|+.+|.+++|||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   72 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR   72 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCce
Confidence            47999999999999764  33457999988743333455678999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.2e-11  Score=71.29  Aligned_cols=64  Identities=23%  Similarity=0.217  Sum_probs=50.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcc-cCHHHHHHHHHHHHHHh-hCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMK-LVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~-~l~~~~iv~   94 (94)
                      ++|.+.+.||+|+||.||+|.+..++..+|+|.+.+.. ......+.+..|..++. .++|||||+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~   67 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH   67 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            57999999999999999999998899999999987421 11223456677777665 589999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4e-11  Score=68.72  Aligned_cols=67  Identities=19%  Similarity=0.320  Sum_probs=53.7

Q ss_pred             eee-ecceEEeeeecccCceEEEEEEECC-----CCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          27 FTI-LKRYQNLKPIGSGAQGIVCAAYDTA-----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        27 ~~~-~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      |++ .++|.+.+.||+|+||.||+|.+..     .+..+|+|.+... ........+.+|+.++.+++|+|||+
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~   87 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVR   87 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEee
Confidence            444 3689999999999999999997632     2457899988742 35566778999999999999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4e-11  Score=69.76  Aligned_cols=57  Identities=32%  Similarity=0.450  Sum_probs=48.4

Q ss_pred             ceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          32 RYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        32 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      +|...++||+|+||.||+|.+..++..+|+|.+.....      ...+|+.+|.+++|+||++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~   77 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVR   77 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCc
Confidence            68999999999999999999988899999998874321      1236999999999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.3e-11  Score=70.52  Aligned_cols=65  Identities=26%  Similarity=0.347  Sum_probs=47.0

Q ss_pred             ecceEEeeeecccCceEEEEEEECCC-CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC---CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTAT-QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV---NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||++.+..+ +..+|+|.+............+.+|+.+|..+   +||||++
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~   74 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR   74 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCC
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcce
Confidence            35799999999999999999998544 56789998764322222233455677766554   8999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.5e-10  Score=66.42  Aligned_cols=59  Identities=25%  Similarity=0.258  Sum_probs=46.9

Q ss_pred             EeeeecccCceEEEEEEECCCC---cEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCCC
Q psy3070          35 NLKPIGSGAQGIVCAAYDTATQ---QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVSH   94 (94)
Q Consensus        35 ~~~~lg~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   94 (94)
                      ..++||+|+||.||+|.+...+   ..+++|.+.. .......+.+.+|+.+|.+++||||++
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~   92 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLS   92 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECC-CCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            3578999999999999875432   3578998874 235567788999999999999999985

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=4.1e-11  Score=68.71  Aligned_cols=64  Identities=19%  Similarity=0.204  Sum_probs=47.8

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcE--EEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQN--VAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .++|++.+.||+|+||.||+|.+..++..  +++|.+... ......+.+.+|+.+|.++ +|||||+
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~HpnIv~   75 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIIN   75 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCC
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc-cChHHHHHHHHHHHHHHhccCCCCEee
Confidence            35789999999999999999998666654  567766531 2334567799999999998 7999985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=7.6e-12  Score=70.69  Aligned_cols=66  Identities=26%  Similarity=0.306  Sum_probs=51.5

Q ss_pred             eecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----HHHHHHHHHHHHHHhhCC--CCCCCC
Q psy3070          29 ILKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----VTHAKRAYREFKLMKLVN--HKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~--~~~iv~   94 (94)
                      +.++|.+.+.||+|+||.||+|.+..++..+|+|.+......    ......+.+|+.+|.+++  |||||+
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~   73 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR   73 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccE
Confidence            346799999999999999999999888999999988742111    112234678999999885  899984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.14  E-value=1.1e-10  Score=68.25  Aligned_cols=65  Identities=17%  Similarity=0.128  Sum_probs=48.4

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCccc-CHHHHHHHH---HHHHHHhhCCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQ-NVTHAKRAY---REFKLMKLVNHKNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~---~e~~~l~~l~~~~iv~   94 (94)
                      .++|.+.+.||+|+||.||+|.+..++..+|+|.+..... .......+.   .++.++..++|||||+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~   71 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC   71 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence            4679999999999999999999988899999998864211 111122233   4466777789999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=1.1e-10  Score=67.81  Aligned_cols=59  Identities=27%  Similarity=0.331  Sum_probs=48.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNV   92 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   92 (94)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+..   .....+.+.+|+.++..++|+++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~---~~~~~~~~~~Ei~~l~~l~~~~~   71 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADN   71 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEec---cccchHHHHHHHHHHHHhcchhh
Confidence            359999999999999999999988899999999883   33455677889988888766543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.6e-10  Score=66.59  Aligned_cols=67  Identities=25%  Similarity=0.359  Sum_probs=48.9

Q ss_pred             eeee-cceEEeeeecccCceEEEEEEECCCCc-----EEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          27 FTIL-KRYQNLKPIGSGAQGIVCAAYDTATQQ-----NVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        27 ~~~~-~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      |++. ++|.+.+.||+|+||.||+|.+...+.     .+++|.+... ........+.+|+.+|.++ +|||||+
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~HpnIv~  105 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK-ADSSEREALMSELKMMTQLGSHENIVN  105 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccc-cCHHHHHHHHHHHHHHHHhcCCCcEeE
Confidence            4443 579999999999999999998744332     5788887642 2334556789999999988 8999985

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.3e-10  Score=64.92  Aligned_cols=68  Identities=28%  Similarity=0.388  Sum_probs=53.6

Q ss_pred             eeee-ecceEEeeeecccCceEEEEEEEC-----CCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          26 KFTI-LKRYQNLKPIGSGAQGIVCAAYDT-----ATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        26 ~~~~-~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      .|++ .++|.+.+.||+|+||.||+|.+.     ..+..+|+|.+... ........+.+|+.++.++ +|||||+
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~~~~~l~~HpnIv~   91 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVN   91 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc-cCHHHHHHHHHHHHHHHhccCCCCEEE
Confidence            4544 368999999999999999999752     33457999998742 3455677899999999998 7999985

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.3e-10  Score=66.27  Aligned_cols=59  Identities=25%  Similarity=0.389  Sum_probs=47.8

Q ss_pred             eecceEEe-eeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhh-CCCCCCCC
Q psy3070          29 ILKRYQNL-KPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL-VNHKNVSH   94 (94)
Q Consensus        29 ~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~   94 (94)
                      +.++|.+. +.||+|+||.||+|.+..++..+|+|.+..       ...+.+|+.++.+ .+|||||+
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~   69 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVR   69 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCC
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCe
Confidence            45789887 469999999999999988899999998873       1345678888665 58999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=3.7e-11  Score=69.32  Aligned_cols=65  Identities=20%  Similarity=0.295  Sum_probs=50.7

Q ss_pred             ecceEEeeeecccCceEEEEEEEC---CCCcEEEEEecCCcc--cCHHHHHHHHHHHHHHhhCCC-CCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDT---ATQQNVAIKKLSRPF--QNVTHAKRAYREFKLMKLVNH-KNVSH   94 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~-~~iv~   94 (94)
                      .++|++.+.||+|+||.||++...   .++..+|+|.+.+..  ......+.+.+|+.+|.+++| |||++
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~   93 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT   93 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCC
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEE
Confidence            478999999999999999999863   357789999987532  122345668899999999966 78874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.00  E-value=3.1e-10  Score=64.58  Aligned_cols=60  Identities=27%  Similarity=0.212  Sum_probs=48.5

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      .++|++.+.||+|+||.||+|.+..++..+|+|.+....    ....+..|+.++..++|++++
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~E~~i~~~l~~~~~i   65 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGI   65 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT----TSCCHHHHHHHHHHSTTSTTC
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc----cCHHHHHHHHHHHHccCCCcc
Confidence            356999999999999999999998888999999866421    123467899999999877654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.3e-09  Score=62.12  Aligned_cols=67  Identities=28%  Similarity=0.409  Sum_probs=46.4

Q ss_pred             eee-ecceEEeeeecccCceEEEEEEECCCC-------cEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          27 FTI-LKRYQNLKPIGSGAQGIVCAAYDTATQ-------QNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        27 ~~~-~~~~~~~~~lg~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      |++ .++|.+.+.||+|+||.||++.....+       ..+|+|.+... ........+.+|...+.++ +|||||+
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~e~~~l~~~~~HpnIv~   83 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIIN   83 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc-cChHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            443 467999999999999999999864332       36899988742 3445667888999888887 8999984

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.6e-09  Score=61.83  Aligned_cols=57  Identities=23%  Similarity=0.308  Sum_probs=42.7

Q ss_pred             cceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHH--HhhCCCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKL--MKLVNHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~--l~~l~~~~iv~   94 (94)
                      .+|.+.+.||+|+||.||+|..  .+..+|+|.+...     ....+..|.++  +..++|||||+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~-----~~~~~~~e~ei~~~~~~~HpnIv~   61 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILG   61 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc-----chhHHHHHHHHHHHhhCCCCcCcc
Confidence            4688899999999999999986  4678999988631     22334444444  45679999985

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.88  E-value=1.5e-09  Score=61.72  Aligned_cols=60  Identities=25%  Similarity=0.333  Sum_probs=46.9

Q ss_pred             ecceEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccCHHHHHHHHHHHHHHhhCCC-CCCC
Q psy3070          30 LKRYQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNH-KNVS   93 (94)
Q Consensus        30 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv   93 (94)
                      .++|++.+.||+|+||.||+|.+...+..+|+|.+....    ....+..|+..+..+.| ++++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~   64 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIP   64 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc----CcHHHHHHHHHHHHhcCCCCCC
Confidence            357999999999999999999998888999999876421    22345678888888855 6665

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=8.9e-09  Score=58.49  Aligned_cols=63  Identities=29%  Similarity=0.365  Sum_probs=46.4

Q ss_pred             cceEEeeeecccCceEEEEEEECCC-----CcEEEEEecCCcccCHHHHHHHHHHHHHHhhC-CCCCCCC
Q psy3070          31 KRYQNLKPIGSGAQGIVCAAYDTAT-----QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNVSH   94 (94)
Q Consensus        31 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~   94 (94)
                      ++|++.+.||+|+||.||+|.+...     +..+|+|.+... ......+.+..|...+.++ +|+||+.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cCcHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            5799999999999999999986432     346899988742 3445567788888887776 6888863

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.41  E-value=1.9e-06  Score=45.78  Aligned_cols=60  Identities=18%  Similarity=0.197  Sum_probs=42.2

Q ss_pred             eEEeeeecccCceEEEEEEECCCCcEEEEEecCCcccC----------------HHHHHHHHHHHHHHhhCCCCCCC
Q psy3070          33 YQNLKPIGSGAQGIVCAAYDTATQQNVAIKKLSRPFQN----------------VTHAKRAYREFKLMKLVNHKNVS   93 (94)
Q Consensus        33 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~~e~~~l~~l~~~~iv   93 (94)
                      +.+.+.||+|+||.||+|.+ ..+..+|+|.+......                .........|...+.++.|.+++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~   77 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP   77 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcc
Confidence            35678999999999999988 46788999976531100                01233456778888888887765