BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3074
(481 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 87/114 (76%), Gaps = 2/114 (1%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
+ GAP TAIRE SLLK+LKH NIVTLHDI+HT +LT VFEY+ DL QY++ ++
Sbjct: 40 EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM 99
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
HN++LF+FQLLRGL+YCHR+++LHRD+KPQNLLI+E ++L F L R S
Sbjct: 100 HNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE--RGELKLADFGLARAKS 151
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 101/207 (48%), Gaps = 59/207 (28%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
+VL R+ KP + +N+ ELKLADFGLARAKS+P+ TY
Sbjct: 120 KVLHRDLKP----QNLLINERG----ELKLADFGLARAKSIPTKTYD------------- 158
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
N+VV TLWYRPPD+LLGST+YST +D
Sbjct: 159 ----------------------NEVV-------------TLWYRPPDILLGSTDYSTQID 183
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYNVHRDAPY 211
MWGVGCI EM TG P FPG V +QL IF+ILGTPTEETW G+ + + Y
Sbjct: 184 MWGVGCIFYEMATGRPLFPG-STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKY 242
Query: 212 TGNKLGLTFPRLYDIPEGESMASAFLQ 238
L PRL +G + + LQ
Sbjct: 243 RAEALLSHAPRLDS--DGADLLTKLLQ 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
GAP TAIRE SLLK+LKH NIVTLHDI+HT +LT VFEY+
Sbjct: 42 GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEG 129
+ YIKLD+LGEG+YATV+KG S LT+ +VALKEIRL+ EEG
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG 42
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN 324
G P +A+RE LLKELKH NIV LHD++H+ LT VFE+ DL +Y + +G LD
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI 102
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY---CHRR 381
++ F+FQLL+GL +CH R +LHRD+KPQNLLI+ + ++L F L R C+
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR--NGELKLANFGLARAFGIPVRCYSA 160
Query: 382 RILHRDVKPQNLLISEIVFT 401
++ +P ++L +++
Sbjct: 161 EVVTLWYRPPDVLFGAKLYS 180
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 74/156 (47%), Gaps = 50/156 (32%)
Query: 58 ELKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVV 117
ELKLA+FGLARA +P
Sbjct: 139 ELKLANFGLARAFGIP-------------------------------------------- 154
Query: 118 ALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMV-TGLPTFPGVREVY 176
+R E +TLWYRPPDVL G+ YSTS+DMW GCI E+ G P FPG +V
Sbjct: 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-NDVD 209
Query: 177 DQLDKIFKILGTPTEETWEGVSLLPGYNVHRDAPYT 212
DQL +IF++LGTPTEE W ++ LP Y + P T
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P +A+RE LLKELKH NIV LHD++H+ LT VFE+
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL-QEEEGI 130
Y KL+++GEG+Y TVFK + T+++VALK +RL ++EG+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV 44
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN 324
G P +A+RE LLKELKH NIV LHD++H+ LT VFE+ DL +Y + +G LD
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI 102
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY---CHRR 381
++ F+FQLL+GL +CH R +LHRD+KPQNLLI+ + ++L F L R C+
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR--NGELKLADFGLARAFGIPVRCYSA 160
Query: 382 RILHRDVKPQNLLISEIVFT 401
++ +P ++L +++
Sbjct: 161 EVVTLWYRPPDVLFGAKLYS 180
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 73/156 (46%), Gaps = 50/156 (32%)
Query: 58 ELKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVV 117
ELKLADFGLARA +P
Sbjct: 139 ELKLADFGLARAFGIP-------------------------------------------- 154
Query: 118 ALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGL-PTFPGVREVY 176
+R E +TLWYRPPDVL G+ YSTS+DMW GCI E+ P FPG +V
Sbjct: 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPG-NDVD 209
Query: 177 DQLDKIFKILGTPTEETWEGVSLLPGYNVHRDAPYT 212
DQL +IF++LGTPTEE W ++ LP Y + P T
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P +A+RE LLKELKH NIV LHD++H+ LT VFE+
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL-QEEEGI 130
Y KL+++GEG+Y TVFK + T+++VALK +RL ++EG+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV 44
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 7/137 (5%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 304
LN V+ KE + G P TAIRE SL+KELKH NIV L+D++HT + LT VFE+
Sbjct: 25 LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84
Query: 305 VHTDLSQYMERHS-----GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEI 359
+ DL +YM+ + GL+ + ++ F +QLL+GL++CH +ILHRD+KPQNLLI++
Sbjct: 85 MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK- 143
Query: 360 DHHNIRLFMFQLLRGLS 376
++L F L R
Sbjct: 144 -RGQLKLGDFGLARAFG 159
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 83/178 (46%), Gaps = 57/178 (32%)
Query: 27 IAEETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFG 86
E ++L R+ KP + +NK +LKL DFGLARA +P +T+S
Sbjct: 123 FCHENKILHRDLKP----QNLLINKRG----QLKLGDFGLARAFGIPVNTFS-------- 166
Query: 87 KADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEY 146
E +TLWYR PDVL+GS Y
Sbjct: 167 ----------------------------------------SEVVTLWYRAPDVLMGSRTY 186
Query: 147 STSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
STS+D+W GCIL EM+TG P FPG + +QL IF I+GTP E W V+ LP YN
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTND-EEQLKLIFDIMGTPNESLWPSVTKLPKYN 243
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SL+KELKH NIV L+D++HT + LT VFE++
Sbjct: 45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 88 ADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEG 129
+ + +L++LG G+YATV+KG + T VALKE++L EEG
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG 45
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 57/175 (32%)
Query: 30 ETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKAD 89
+ RVL R+ KP + +N+ ELK+ADFGLARA +P Y+H
Sbjct: 118 DRRVLHRDLKP----QNLLINREG----ELKIADFGLARAFGIPVRKYTH---------- 159
Query: 90 AYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTS 149
E +TLWYR PDVL+GS +YST+
Sbjct: 160 --------------------------------------EVVTLWYRAPDVLMGSKKYSTT 181
Query: 150 LDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+D+W VGCI EMV G P FPGV E DQL +IF+ILGTP + W V+ LP Y+
Sbjct: 182 IDIWSVGCIFAEMVNGAPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYD 235
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN 324
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++ DL + ++ GGL+
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRR 381
+ F+ QLL G++YCH RR+LHRD+KPQNLLI+ +++ F L R R+
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVRK 156
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ Y L+++GEG+Y V+K +N + ALK+IRL+ E+EGI
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGI 43
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 7/125 (5%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG 319
+ G P TAIRE SLLKEL H NIV+L D++H+ LT VFE++ DL + ++ + G
Sbjct: 56 DAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG 115
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL---- 375
L I+++++QLLRG+++CH+ RILHRD+KPQNLLI+ ++L F L R
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPV 173
Query: 376 -SYCH 379
SY H
Sbjct: 174 RSYTH 178
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 90/198 (45%), Gaps = 58/198 (29%)
Query: 5 ENKATVQ-RQISVSSDSKLLDADIAEETRVLLRNRKPPRPKSEVFLNKYATPPRELKLAD 63
ENK +Q QI + L + R+L R+ KP + +N LKLAD
Sbjct: 111 ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP----QNLLINSDGA----LKLAD 162
Query: 64 FGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIR 123
FGLARA +P +Y+H
Sbjct: 163 FGLARAFGIPVRSYTH-------------------------------------------- 178
Query: 124 LQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIF 183
E +TLWYR PDVL+GS +YSTS+D+W +GCI EM+TG P FPGV + DQL KIF
Sbjct: 179 ----EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD-DDQLPKIF 233
Query: 184 KILGTPTEETWEGVSLLP 201
ILGTP W V LP
Sbjct: 234 SILGTPNPREWPQVQELP 251
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV+L D++H+ LT VFE++
Sbjct: 61 GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + Y KL+++GEG+Y V+K + ++VALK IRL E+EGI
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGI 62
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 57/175 (32%)
Query: 30 ETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKAD 89
+ RVL R+ KP + +N+ ELK+ADFGLARA +P Y+H
Sbjct: 118 DRRVLHRDLKP----QNLLINREG----ELKIADFGLARAFGIPVRKYTH---------- 159
Query: 90 AYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTS 149
E +TLWYR PDVL+GS +YST+
Sbjct: 160 --------------------------------------EVVTLWYRAPDVLMGSKKYSTT 181
Query: 150 LDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+D+W VGCI EMV G P FPGV E DQL +IF+ILGTP + W V+ LP Y+
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYD 235
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN 324
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++ DL + ++ GGL+
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRR 381
+ F+ QLL G++YCH RR+LHRD+KPQNLLI+ +++ F L R R+
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVRK 156
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ Y L+++GEG+Y V+K +N + ALK+IRL+ E+EGI
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGI 43
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 7/125 (5%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG 319
+ G P TAIRE SLLKEL H NIV+L D++H+ LT VFE++ DL + ++ + G
Sbjct: 56 DAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG 115
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL---- 375
L I+++++QLLRG+++CH+ RILHRD+KPQNLLI+ ++L F L R
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPV 173
Query: 376 -SYCH 379
SY H
Sbjct: 174 RSYTH 178
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 90/198 (45%), Gaps = 58/198 (29%)
Query: 5 ENKATVQ-RQISVSSDSKLLDADIAEETRVLLRNRKPPRPKSEVFLNKYATPPRELKLAD 63
ENK +Q QI + L + R+L R+ KP + +N LKLAD
Sbjct: 111 ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP----QNLLINSDGA----LKLAD 162
Query: 64 FGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIR 123
FGLARA +P +Y+H
Sbjct: 163 FGLARAFGIPVRSYTH-------------------------------------------- 178
Query: 124 LQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIF 183
E +TLWYR PDVL+GS +YSTS+D+W +GCI EM+TG P FPGV + DQL KIF
Sbjct: 179 ----EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD-DDQLPKIF 233
Query: 184 KILGTPTEETWEGVSLLP 201
ILGTP W V LP
Sbjct: 234 SILGTPNPREWPQVQELP 251
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV+L D++H+ LT VFE++
Sbjct: 61 GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + Y KL+++GEG+Y V+K + ++VALK IRL E+EGI
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGI 62
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 57/175 (32%)
Query: 30 ETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKAD 89
+ RVL R+ KP + +N+ ELK+ADFGLARA +P Y+H
Sbjct: 118 DRRVLHRDLKP----QNLLINREG----ELKIADFGLARAFGIPVRKYTH---------- 159
Query: 90 AYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTS 149
E +TLWYR PDVL+GS +YST+
Sbjct: 160 --------------------------------------EIVTLWYRAPDVLMGSKKYSTT 181
Query: 150 LDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+D+W VGCI EMV G P FPGV E DQL +IF+ILGTP + W V+ LP Y+
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYD 235
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN 324
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++ DL + ++ GGL+
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRR 381
+ F+ QLL G++YCH RR+LHRD+KPQNLLI+ +++ F L R R+
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVRK 156
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P T IRE S+LKELKH+NIV L+D++HT+ L VFE++
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ Y L+++GEG+Y V+K +N + ALK+IRL+ E+EGI
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGI 43
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
I+ ++FQLL+GLS+CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAF 153
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAF 153
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 104
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 156
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 125 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 164
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 165 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 188
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 47
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 109
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 161
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 130 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 169
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 170 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 193
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 91
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 52
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 109
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 161
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 130 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 169
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 170 ------------------------------------EVVTLWYRAPEILLGXKYYSTAVD 193
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 91
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 52
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 44
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDHH 323
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 154
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAF 153
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 157
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 84 PFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 104
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 156
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 125 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 164
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 165 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 188
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 47
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 157
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 106
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 158
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 127 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 166
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 167 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 190
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 88
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 83 SPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 49
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 154
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGXKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 44
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 44
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 103
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 155
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 124 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 163
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 164 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 187
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 46
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAF 153
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 103
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 155
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 124 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 163
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 164 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 187
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 46
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 154
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVAL +IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGV 45
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 154
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVAL +IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGV 44
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 44
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 154
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 123 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 103
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 155
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 124 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 163
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 164 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 187
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 46
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 106
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 158
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 127 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 166
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 167 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 190
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 88
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 83 SPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 49
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE+VH DL +M+ + G+
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL 101
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 153
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY+H
Sbjct: 122 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYTH------------ 161
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 162 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 185
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE+V
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV 83
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 44
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL +M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 157
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 104
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KP+NLLI+ I+L F L R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFG 156
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 125 RVLHRDLKP----ENLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 164
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 165 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 188
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 47
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL ++M+ + G+
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 103
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KP+NLLI+ I+L F L R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFG 155
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 124 RVLHRDLKP----ENLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 163
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 164 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 187
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 46
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++H DL +M+ + G+
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL 102
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
I+ ++FQLL+GL++CH R+LHRD+KP+NLLI+ I+L F L R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAF 153
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 123 RVLHRDLKP----ENLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 162
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 163 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 186
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
+ K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 45
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE+V DL ++M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 157
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE+V
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV 87
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++ DL +M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 157
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 84 PFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDHH 323
G P TAIRE SLLKEL H NIV L D++HT + L VFE++ DL +M+ + G+
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP 105
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KPQNLLI+ I+L F L R
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFG 156
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 125 RVLHRDLKP----QNLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 164
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 165 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 188
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 47
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++ DL ++M+ + G+
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL 105
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KP+NLLI+ I+L F L R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFG 157
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 126 RVLHRDLKP----ENLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 165
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 166 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 189
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 84 PFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 48
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 264 NGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDH 322
G P TAIRE SLLKEL H NIV L D++HT + L VFE++ DL ++M+ + G+
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL 103
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
I+ ++FQLL+GL++CH R+LHRD+KP+NLLI+ I+L F L R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFG 155
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 57/173 (32%)
Query: 32 RVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAY 91
RVL R+ KP + +N +KLADFGLARA VP TY H
Sbjct: 124 RVLHRDLKP----ENLLINTEGA----IKLADFGLARAFGVPVRTYXH------------ 163
Query: 92 IKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLD 151
E +TLWYR P++LLG YST++D
Sbjct: 164 ------------------------------------EVVTLWYRAPEILLGCKYYSTAVD 187
Query: 152 MWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN 204
+W +GCI EMVT FPG E+ DQL +IF+ LGTP E W GV+ +P Y
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL H NIV L D++HT + L VFE++
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 86 GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
G + + K++++GEG+Y V+K + LT +VVALK+IRL E EG+
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV 46
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
+ G P TAIRE SLLKEL+H NI+ L ++H L +FEY DL +YM+++ +
Sbjct: 73 EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP-DVSM 131
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
I+ F++QL+ G+++CH RR LHRD+KPQNLL+S D
Sbjct: 132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD 169
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 49/146 (33%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LK+ DFGLARA +P ++H
Sbjct: 176 LKIGDFGLARAFGIPIRQFTH--------------------------------------- 196
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
E ITLWYRPP++LLGS YSTS+D+W + CI EM+ P FPG E+ DQ
Sbjct: 197 ---------EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQ 246
Query: 179 LDKIFKILGTPTEETWEGVSLLPGYN 204
L KIF++LG P + TW GV+ LP +
Sbjct: 247 LFKIFEVLGLPDDTTWPGVTALPDWK 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
G P TAIRE SLLKEL+H NI+ L ++H L +FEY
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA 115
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
D Y ++ +LGEG+Y V+K +TN+ VA+K IRL+ EEEG+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGV 76
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 67/152 (44%), Gaps = 49/152 (32%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LKLADFGLA++ P+ Y HQ
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQV------------------------------------- 173
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
+T WYR P++L G+ Y +DMW VGCIL E++ +P PG ++ DQ
Sbjct: 174 -----------VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQ 221
Query: 179 LDKIFKILGTPTEETWEGVSLLPGYNVHRDAP 210
L +IF+ LGTPTEE W + LP Y + P
Sbjct: 222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K+G TA+RE LL+EL H NI+ L D +S ++ VF+++ TDL ++ +S L
Sbjct: 52 KDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP 111
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+I+ +M L+GL Y H+ ILHRD+KP NLL+ E
Sbjct: 112 SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE 147
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 87 KADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+A Y KLD LGEG +ATV+K TNQ+VA+K+I+L
Sbjct: 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKL 45
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 440 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
TA+RE LL+EL H NI+ L D +S ++ VF+++
Sbjct: 58 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 263 KNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYME 314
+ G P + IRE ++L+ L+ H N+V L D+ T LT VFE+V DL+ Y++
Sbjct: 51 EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD 110
Query: 315 R-HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ G+ I+ MFQLLRGL + H R++HRD+KPQN+L++ I+L F L R
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLAR 168
Query: 374 GLSY 377
S+
Sbjct: 169 IYSF 172
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL S+ Y+T +D+W VGCI EM P F G +V DQL KI ++G P
Sbjct: 181 VTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLP 238
Query: 190 TEETWEGVSLLPGYNVH 206
EE W LP H
Sbjct: 239 GEEDWPRDVALPRQAFH 255
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTN--QVVALKEIRLQE-EEGITL 132
Y + ++GEG+Y VFK +L N + VALK +R+Q EEG+ L
Sbjct: 13 YECVAEIGEGAYGKVFKA-RDLKNGGRFVALKRVRVQTGEEGMPL 56
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 263 KNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYME 314
+ G P + IRE ++L+ L+ H N+V L D+ T LT VFE+V DL+ Y++
Sbjct: 51 EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD 110
Query: 315 R-HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ G+ I+ MFQLLRGL + H R++HRD+KPQN+L++ I+L F L R
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLAR 168
Query: 374 GLSY 377
S+
Sbjct: 169 IYSF 172
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL S+ Y+T +D+W VGCI EM P F G +V DQL KI ++G P
Sbjct: 181 VTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLP 238
Query: 190 TEETWEGVSLLPGYNVH 206
EE W LP H
Sbjct: 239 GEEDWPRDVALPRQAFH 255
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTN--QVVALKEIRLQE-EEGITL 132
Y + ++GEG+Y VFK +L N + VALK +R+Q EEG+ L
Sbjct: 13 YECVAEIGEGAYGKVFKA-RDLKNGGRFVALKRVRVQTGEEGMPL 56
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 263 KNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYME 314
+ G P + IRE ++L+ L+ H N+V L D+ T LT VFE+V DL+ Y++
Sbjct: 51 EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD 110
Query: 315 R-HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ G+ I+ MFQLLRGL + H R++HRD+KPQN+L++ I+L F L R
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLAR 168
Query: 374 GLSY 377
S+
Sbjct: 169 IYSF 172
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL S+ Y+T +D+W VGCI EM P F G +V DQL KI ++G P
Sbjct: 181 VTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLP 238
Query: 190 TEETWEGVSLLPGYNVH 206
EE W LP H
Sbjct: 239 GEEDWPRDVALPRQAFH 255
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTN--QVVALKEIRLQE-EEGITL 132
Y + ++GEG+Y VFK +L N + VALK +R+Q EEG+ L
Sbjct: 13 YECVAEIGEGAYGKVFKA-RDLKNGGRFVALKRVRVQTGEEGMPL 56
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
A+RE LLK+L+H N+V L ++ + VFE+V + +E GLD+ ++ ++
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL 130
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
FQ++ G+ +CH I+HRD+KP+N+L+S+
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQ 159
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 126 EEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
++E T WYR P++L+G +Y ++D+W +GC++ EM G P FPG ++ DQL I
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMC 240
Query: 186 LGT 188
LG
Sbjct: 241 LGN 243
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 441 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
A+RE LLK+L+H N+V L ++ + VFE+V
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKE 121
F + Y L +GEGSY V K + T ++VA+K+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKK 57
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 97 LGEGSYATVFK----GYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDM 152
+GEG K G++ L N LK + + +T WYR P++LLG+ Y+ ++D+
Sbjct: 162 MGEGPERGRVKIADMGFARLFNS--PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI 219
Query: 153 WGVGCILIEMVTGLPTFPGVREV--------YDQLDKIFKILGTPTEETWEGVSLLPGYN 204
W +GCI E++T P F +E +DQLD+IF ++G P ++ WE + +P ++
Sbjct: 220 WAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHS 279
Query: 205 V 205
Sbjct: 280 T 280
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 265 GAPFTAIREASLLKELKHNNIVTLHDIV--HTRSTLTFVFEYVHTDLSQYMERHSGG--- 319
G +A RE +LL+ELKH N+++L + H + +F+Y DL ++ H
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN 119
Query: 320 -----LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
L ++ ++Q+L G+ Y H +LHRD+KP N+L+
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIV--HTRSTLTFVFEYV 476
G +A RE +LL+ELKH N+++L + H + +F+Y
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 102
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
A+RE +LK+LKH N+V L ++ + L VFEY + ++R+ G+ H ++
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSIT 108
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+Q L+ +++CH+ +HRDVKP+N+LI++ H I+L F R L+
Sbjct: 109 WQTLQAVNFCHKHNCIHRDVKPENILITK--HSVIKLCDFGFARLLT 153
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 126 EEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
++E T WYR P++L+G T+Y +D+W +GC+ E+++G+P +PG +V DQL I K
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV-DQLYLIRKT 218
Query: 186 LG 187
LG
Sbjct: 219 LG 220
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 89 DAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGI 130
+ Y K+ ++GEGSY VFK + T Q+VA+K+ E++ +
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV 44
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 441 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
A+RE +LK+LKH N+V L ++ + L VFEY
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 260 NGPKNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQ 311
NG + G P + +RE +LL+ L+ H N+V L D+ T T +T VFE+V DL
Sbjct: 41 NG-EEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT 99
Query: 312 YMERHSG-GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQ 370
Y+++ GL I+ M Q LRGL + H I+HRD+KP+N+L++ ++L F
Sbjct: 100 YLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFG 157
Query: 371 LLRGLSY 377
L R SY
Sbjct: 158 LARIYSY 164
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL ST Y+T +DMW VGCI EM P F G E DQL KIF ++G P
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 230
Query: 190 TEETW 194
E+ W
Sbjct: 231 PEDDW 235
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 436 GAPFTAIREASLLKEL---KHNNIVTLHDIVHTRST-----LTFVFEYV 476
G P + +RE +LL+ L +H N+V L D+ T T +T VFE+V
Sbjct: 45 GLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQE-EEGITL 132
Y + ++G G+Y TV+K + VALK +R+ EEG+ +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI 48
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 260 NGPKNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQ 311
NG + G P + +RE +LL+ L+ H N+V L D+ T T +T VFE+V DL
Sbjct: 41 NG-EEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT 99
Query: 312 YMERHSG-GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQ 370
Y+++ GL I+ M Q LRGL + H I+HRD+KP+N+L++ ++L F
Sbjct: 100 YLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFG 157
Query: 371 LLRGLSY 377
L R SY
Sbjct: 158 LARIYSY 164
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL ST Y+T +DMW VGCI EM P F G E DQL KIF ++G P
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 230
Query: 190 TEETW 194
E+ W
Sbjct: 231 PEDDW 235
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 436 GAPFTAIREASLLKEL---KHNNIVTLHDIVHTRST-----LTFVFEYV 476
G P + +RE +LL+ L +H N+V L D+ T T +T VFE+V
Sbjct: 45 GLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQE-EEGITL 132
Y + ++G G+Y TV+K + VALK +R+ EEG+ +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI 48
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 260 NGPKNGAPFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQ 311
NG + G P + +RE +LL+ L+ H N+V L D+ T T +T VFE+V DL
Sbjct: 41 NG-EEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT 99
Query: 312 YMERHSG-GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQ 370
Y+++ GL I+ M Q LRGL + H I+HRD+KP+N+L++ ++L F
Sbjct: 100 YLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFG 157
Query: 371 LLRGLSY 377
L R SY
Sbjct: 158 LARIYSY 164
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL ST Y+T +DMW VGCI EM P F G E DQL KIF ++G P
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 230
Query: 190 TEETW 194
E+ W
Sbjct: 231 PEDDW 235
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 436 GAPFTAIREASLLKEL---KHNNIVTLHDIVHTRST-----LTFVFEYV 476
G P + +RE +LL+ L +H N+V L D+ T T +T VFE+V
Sbjct: 45 GLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQE-EEGITL 132
Y + ++G G+Y TV+K + VALK +R+ EEG+ +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI 48
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 176
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 253
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 254 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 70 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 128
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 129 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 184
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 132 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 163
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 180 VSYICSR 186
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 257
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 258 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 132
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 188
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 246
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 247 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 121
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 122 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 177
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 125 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 156
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 180 VSYICSR 186
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D+V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 176
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 257
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 258 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 132
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 188
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 176
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 264
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 265 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 318
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 81 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 139
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 140 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 195
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 143 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 174
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 249
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 250 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 124
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 125 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 180
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 128 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 159
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 258
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 259 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 75 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 133
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 134 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 193 VSYICSR 199
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 137 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 168
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 273
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 274 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 90 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 148
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 149 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 207
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 208 VSYICSR 214
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 152 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 183
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 280 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 154
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 210
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 250
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 251 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 67 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 125
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 126 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 184
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 185 VSYICSR 191
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 129 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 160
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 280 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 154
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 214 VSYICSR 220
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 281
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 282 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 98 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 156
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 157 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 215
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 216 VSYICSR 222
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 160 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 191
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 283
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 284 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 100 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 158
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 159 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 217
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 218 VSYICSR 224
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 162 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 193
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 324
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + + F R PE ++ S L+ A L P+E
Sbjct: 325 QIREMN--PNYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 378
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 141 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 199
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 200 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 258
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 259 VSYICSR 265
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 203 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFAFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 272 REASLLKELKHNNIVTLH----------DIVHTRSTLTFVFEYVHTDLSQYMERHSGGLD 321
RE ++++L H NIV L D V+ L +V E V+ ++++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLP 120
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG--- 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 375 LSY-CHR 380
+SY C R
Sbjct: 180 VSYICSR 186
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 127 EEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL 186
E T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I IL
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGIL 264
Query: 187 GTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
G+P++E + + N + P +K + + +L+ P+ +S A L
Sbjct: 265 GSPSQEDLNCIINMKARNYLQSLP---SKTKVAWAKLF--PKSDSKALDLL 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 22/151 (14%)
Query: 216 LGLTFPRLYDIPEGE--SMASAFLQVRDAAI----LNPMEHVHNCEKEGGNGPKNGAPFT 269
+G + +L I EG ++SA+ VR + ++P EH C++
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQR------------- 87
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQ---YMERHSGGLDHHNIR 326
+RE +L +H N++ + DI+ + Y+ DL + Y S L + +I
Sbjct: 88 TLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHIC 147
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
F++Q+LRGL Y H +LHRD+KP NLLI+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLIN 178
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 72 VPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
VP +G PF Y +L +GEG+Y V Y ++ VA+K+I
Sbjct: 27 VPGEVEMVKG-QPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI 76
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T+Y++S+D+W GC+L E++ G P FPG V DQL +I K+LGTPT E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 245
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPME 249
++ P Y + F R PE ++ S L+ A L P+E
Sbjct: 246 QIREMN--PNYTEFAFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLE 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRST------LTFVFEYVHTDL---SQYMERHSGGLDH 322
RE ++++L H NIV L ++ L V +YV + +++ R L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV 121
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF----QLLRG 374
++L+M+QL R L+Y H I HRD+KPQNLL+ + D ++L F QL+RG
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRG 176
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
++L+M+QL R L+Y H I HRD+KPQNLL+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 267 PFTAIREASLLKELK---HNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYMERHSG 318
P + +RE +LL+ L+ H N+V L D+ T T +T VFE+V DL Y+++
Sbjct: 55 PISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPP 114
Query: 319 -GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
GL I+ M Q LRGL + H I+HRD+KP+N+L++ ++L F L R SY
Sbjct: 115 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIYSY 172
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+TLWYR P+VLL ST Y+T +DMW VGCI EM P F G E DQL KIF ++G P
Sbjct: 181 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 238
Query: 190 TEETW 194
E+ W
Sbjct: 239 PEDDW 243
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 438 PFTAIREASLLKEL---KHNNIVTLHDIVHTRST-----LTFVFEYV 476
P + +RE +LL+ L +H N+V L D+ T T +T VFE+V
Sbjct: 55 PISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 127 EEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL 186
E T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I IL
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGIL 248
Query: 187 GTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
G+P++E + L N P+ K + + RL+ P +S A L
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 60 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 127 EEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL 186
E T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I IL
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGIL 249
Query: 187 GTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
G+P++E + L N P+ K + + RL+ P +S A L
Sbjct: 250 GSPSQEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 295
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 61 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 107
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 61
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 252
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 253 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 60 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 107 IVQDLMETDLYKLLKCQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 252
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 253 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 60 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI 60
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 248
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 249 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 290
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 56 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 102
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 56
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 250
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 251 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 58 ISPFEHQTYCQR-------------TLREIKILLAFRHENIIGINDIIRAPTIEQMKDVY 104
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 58
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 253
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 254 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 295
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 61 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 107
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 61
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 252
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 253 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 60 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 254
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 255 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 296
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 62 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 108
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 109 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 164
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 25 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 62
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 245
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 246 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 287
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 53 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 99
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 100 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 155
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 16 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 53
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 252
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 253 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 60 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 248
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 249 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 290
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 56 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 102
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 56
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 250
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 251 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 26/153 (16%)
Query: 216 LGLTFPRLYDIPEGE--SMASAFLQVRDAAI----LNPMEHVHNCEKEGGNGPKNGAPFT 269
+G + L I EG + SA+ V + ++P EH C++
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR------------- 69
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYMERHSGGLDHHN 324
+RE +L +H NI+ ++DI+ + + V + + TDL + ++ DH
Sbjct: 70 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-- 127
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 58
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 246
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 247 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 288
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 54 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 100
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 54
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 252
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 253 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYMERHSGGLDHHN 324
+RE +L +H NI+ ++DI+ + + V + + TDL + ++ DH
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-- 129
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 248
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 249 QEDLNXIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 56 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 102
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 56
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 248
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 249 QEDLNXIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 56 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 102
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 56
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 256
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 257 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 64 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 110
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 111 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 166
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 27 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 64
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 248
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 249 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 290
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 56 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 102
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 56
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 268
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 269 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 310
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
Query: 216 LGLTFPRLYDIPEGE--SMASAFLQVRDAAI----LNPMEHVHNCEKEGGNGPKNGAPFT 269
+G + L I EG + SA+ V + ++P EH C++
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR------------- 87
Query: 270 AIREASLLKELKHNNIVTLHDIVH--TRSTLTFVFEYVH---TDLSQYMERHSGGLDHHN 324
+RE +L +H NI+ ++DI+ T + V+ H DL + ++ DH
Sbjct: 88 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH-- 145
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 76
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 268
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 269 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 310
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 26/153 (16%)
Query: 216 LGLTFPRLYDIPEGE--SMASAFLQVRDAAI----LNPMEHVHNCEKEGGNGPKNGAPFT 269
+G + L I EG + SA+ V + ++P EH C++
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR------------- 87
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYMERHSGGLDHHN 324
+RE +L +H NI+ ++DI+ + + V + + TDL + ++ DH
Sbjct: 88 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-- 145
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 76
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPS 250
Query: 191 EETWE-GVSL 199
+E G++L
Sbjct: 251 QEDLNCGINL 260
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 26/153 (16%)
Query: 216 LGLTFPRLYDIPEGE--SMASAFLQVRDAAI----LNPMEHVHNCEKEGGNGPKNGAPFT 269
+G + L I EG + SA+ V + ++P EH C++
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR------------- 69
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRST-----LTFVFEYVHTDLSQYMERHSGGLDHHN 324
+RE +L +H NI+ ++DI+ + + V + + TDL + ++ DH
Sbjct: 70 TLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH-- 127
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y N+ VA+K+I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 58
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P++LLGST+Y+ +DMW +GCIL E++ G P FPG +QL++I ++ P+
Sbjct: 193 TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG-SSTMNQLERIIGVIDFPS 251
Query: 191 EETWEGV 197
E E +
Sbjct: 252 NEDVESI 258
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 272 REASLLKELK-HNNIVTLHDIVHTRST--LTFVFEYVHTDLSQYMERHSGGLDHHNIRLF 328
RE +L EL H NIV L +++ + + VF+Y+ TDL + + L+ + +
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI--RANILEPVHKQYV 114
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
++QL++ + Y H +LHRD+KP N+L++ H +++ F L R S+ + RR+
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH--VKVADFGLSR--SFVNIRRV 165
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
Y + +LG+G+Y V+K T +VVA+K+I
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI 42
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L S Y+ S+D+W VGCIL EM++ P FPG + DQL+ I ILG+P
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGSPE 246
Query: 191 EETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFL 237
+E + L N P+ K + + RL+ P +S A L
Sbjct: 247 QEDLNCIINLKARNYLLSLPH---KNKVPWNRLF--PNADSKALDLL 288
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 245 LNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST-----LT 299
++P EH C++ +RE +L +H NI+ ++DI+ + +
Sbjct: 54 ISPFEHQTYCQR-------------TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 100
Query: 300 FVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
V + + TDL + ++ DH I F++Q+LRGL Y H +LHRD+KP NLL++
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDH--ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 85 FGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
F Y L +GEG+Y V Y NL VA+K+I
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 54
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE S L+ L+H +I+ L+D++ ++ + V EY +L Y+ + + R F Q
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQ 121
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ + YCHR +I+HRD+KP+NLL+ E H N+++ F L
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGL 159
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 475
RE S L+ L+H +I+ L+D++ ++ + V EY
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 95
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE S L+ L+H +I+ L+D++ ++ + V EY +L Y+ + + R F Q
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQ 115
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ + YCHR +I+HRD+KP+NLL+ E H N+++ F L
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGL 153
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 475
RE S L+ L+H +I+ L+D++ ++ + V EY
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 89
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE S L+ L+H +I+ L+D++ ++ + V EY +L Y+ + + R F Q
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQ 120
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ + YCHR +I+HRD+KP+NLL+ E H N+++ F L
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGL 158
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 475
RE S L+ L+H +I+ L+D++ ++ + V EY
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE S L+ L+H +I+ L+D++ ++ + V EY +L Y+ + + R F Q
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQ 111
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ + YCHR +I+HRD+KP+NLL+ E H N+++ F L
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGL 149
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 475
RE S L+ L+H +I+ L+D++ ++ + V EY
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 85
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 13/114 (11%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF--------VFEYVHTDLSQYMERHSGGLDH 322
+RE +LK KH+NI+ + DI+ R T+ + V + + +DL Q + S L
Sbjct: 102 LRELKILKHFKHDNIIAIKDIL--RPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTL 158
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
++R F++QLLRGL Y H +++HRD+KP NLL++E + +++ F + RGL
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLC 210
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L EY+ ++D+W VGCI EM+ FPG V+ QL I +LGTP+
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPS 284
Query: 191 EETWEGV 197
+ V
Sbjct: 285 PAVIQAV 291
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 82 DSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
D F D Y ++ +G G+Y V LT Q VA+K+I
Sbjct: 48 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI 88
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 13/114 (11%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF--------VFEYVHTDLSQYMERHSGGLDH 322
+RE +LK KH+NI+ + DI+ R T+ + V + + +DL Q + S L
Sbjct: 101 LRELKILKHFKHDNIIAIKDIL--RPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTL 157
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
++R F++QLLRGL Y H +++HRD+KP NLL++E + +++ F + RGL
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLC 209
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L EY+ ++D+W VGCI EM+ FPG V+ QL I +LGTP+
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPS 283
Query: 191 EETWEGV 197
+ V
Sbjct: 284 PAVIQAV 290
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 82 DSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEI 122
D F D Y ++ +G G+Y V LT Q VA+K+I
Sbjct: 47 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI 87
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++ G+T Y+T++D+W GC++ E++ G P FPG + DQL +I K+LGTP+ E
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSRE 264
Query: 193 TWEGVSLLPGYNVHR 207
+ ++ P Y H+
Sbjct: 265 QIKTMN--PNYMEHK 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRST------LTFVFEYVHTDLSQYMERHSGGLDHHN- 324
RE +++ +KH N+V L ++ L V EYV + + RH L
Sbjct: 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR-ASRHYAKLKQTMP 139
Query: 325 ---IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
I+L+M+QLLR L+Y H I HRD+KPQNLL+
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
I+L+M+QLLR L+Y H I HRD+KPQNLL+
Sbjct: 143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 16/105 (15%)
Query: 270 AIREASLLKELKHNNIVTLHDIVH-TRSTLT-------------FVFEYVHTDLSQYMER 315
A+RE +++ L H+NIV + +I+ + S LT V EY+ TDL+ +E+
Sbjct: 55 ALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ 114
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
G L + RLFM+QLLRGL Y H +LHRD+KP NL I+ D
Sbjct: 115 --GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED 157
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 54/172 (31%)
Query: 33 VLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQGDSPFGKADAYI 92
VL R+ KP + +F+N T LK+ DFGLAR + YSH+G
Sbjct: 141 VLHRDLKP----ANLFIN---TEDLVLKIGDFGLAR---IMDPHYSHKG----------- 179
Query: 93 KLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDM 152
L EG +T WYR P +LL Y+ ++DM
Sbjct: 180 ---HLSEGL----------------------------VTKWYRSPRLLLSPNNYTKAIDM 208
Query: 153 WGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEET-WEGVSLLPGY 203
W GCI EM+TG F G E+ +Q+ I + + EE E +S++P Y
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIPVVHEEDRQELLSVIPVY 259
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST--------LTFVFEYVHTDLSQYME 314
K G P TA+RE +L+ LKH N+V L +I T+++ + VF++ DL+ +
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLS 116
Query: 315 RHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
I+ M LL GL Y HR +ILHRD+K N+LI+ ++L F L R
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARA 174
Query: 375 LSYC-------HRRRILHRDVKPQNLLISE 397
S + R++ +P LL+ E
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 62/140 (44%), Gaps = 45/140 (32%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LKLADFGLARA S+ ++ ++ N+VV
Sbjct: 164 LKLADFGLARAFSLAKNSQPNR-------------------------------YXNRVV- 191
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
TLWYRPP++LLG +Y +D+WG GCI+ EM T P G E + Q
Sbjct: 192 ------------TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-Q 238
Query: 179 LDKIFKILGTPTEETWEGVS 198
L I ++ G+ T E W V
Sbjct: 239 LALISQLCGSITPEVWPNVD 258
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRST 468
G P TA+RE +L+ LKH N+V L +I T+++
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 73 PSHTYSHQGDSPF-GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P+ Y + PF + Y KL ++G+G++ VFK T Q VALK++ ++ E+EG
Sbjct: 2 PAKQYDSV-ECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 131 TL 132
+
Sbjct: 61 PI 62
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST--------LTFVFEYVHTDLSQYME 314
K G P TA+RE +L+ LKH N+V L +I T+++ + VF++ DL+ +
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 116
Query: 315 RHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
I+ M LL GL Y HR +ILHRD+K N+LI+ ++L F L R
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARA 174
Query: 375 LSYC-------HRRRILHRDVKPQNLLISE 397
S + R++ +P LL+ E
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 62/140 (44%), Gaps = 45/140 (32%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LKLADFGLARA S+ ++ ++ N+VV
Sbjct: 164 LKLADFGLARAFSLAKNSQPNR-------------------------------YXNRVV- 191
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
TLWYRPP++LLG +Y +D+WG GCI+ EM T P G E + Q
Sbjct: 192 ------------TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-Q 238
Query: 179 LDKIFKILGTPTEETWEGVS 198
L I ++ G+ T E W V
Sbjct: 239 LALISQLCGSITPEVWPNVD 258
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRST 468
G P TA+RE +L+ LKH N+V L +I T+++
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 73 PSHTYSHQGDSPF-GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGI 130
P+ Y + PF + Y KL ++G+G++ VFK T Q VALK++ ++ E+EG
Sbjct: 2 PAKQYDSV-ECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 131 TL 132
+
Sbjct: 61 PI 62
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+++LG+TEY+ S+D+W +GC+ E++ G P F G + DQL +I +I+GTPT+E
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKE 264
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 298 LTFVFEYVHTDLSQYME---RHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 354
L + EYV L + ++ R + + I ++++QL R + + H I HRD+KPQNL
Sbjct: 113 LNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL 172
Query: 355 LISEIDH 361
L++ D+
Sbjct: 173 LVNSKDN 179
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE ++K L H NI+ L D +T D ++ +++G +HH +
Sbjct: 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPS 108
Query: 332 LLRGLSYC--HRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVK 389
+ L+ + LH+ +K I + I ++++QL R + + H I HRD+K
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 390 PQNLLIS 396
PQNLL++
Sbjct: 169 PQNLLVN 175
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST--------LTFVFEYVHTDLSQYME 314
K G P TA+RE +L+ LKH N+V L +I T+++ + VF++ DL+ +
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 116
Query: 315 RHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
I+ M LL GL Y HR +ILHRD+K N+LI+ ++L F L R
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARA 174
Query: 375 LSYC-------HRRRILHRDVKPQNLLISE 397
S + R++ +P LL+ E
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 62/139 (44%), Gaps = 45/139 (32%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LKLADFGLARA S+ ++ ++ N+VV
Sbjct: 164 LKLADFGLARAFSLAKNSQPNR-------------------------------YXNRVV- 191
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
TLWYRPP++LLG +Y +D+WG GCI+ EM T P G E + Q
Sbjct: 192 ------------TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-Q 238
Query: 179 LDKIFKILGTPTEETWEGV 197
L I ++ G+ T E W V
Sbjct: 239 LALISQLCGSITPEVWPNV 257
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRST 468
G P TA+RE +L+ LKH N+V L +I T+++
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 82 DSPF-GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGITL 132
+ PF + Y KL ++G+G++ VFK T Q VALK++ ++ E+EG +
Sbjct: 10 ECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRST--------LTFVFEYVHTDLSQYME 314
K G P TA+RE +L+ LKH N+V L +I T+++ + VF++ DL+ +
Sbjct: 56 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 115
Query: 315 RHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
I+ M LL GL Y HR +ILHRD+K N+LI+ ++L F L R
Sbjct: 116 NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARA 173
Query: 375 LSYC-------HRRRILHRDVKPQNLLISE 397
S + R++ +P LL+ E
Sbjct: 174 FSLAKNSQPNRYXNRVVTLWYRPPELLLGE 203
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 62/140 (44%), Gaps = 45/140 (32%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
LKLADFGLARA S+ ++ ++ N+VV
Sbjct: 163 LKLADFGLARAFSLAKNSQPNR-------------------------------YXNRVV- 190
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQ 178
TLWYRPP++LLG +Y +D+WG GCI+ EM T P G E + Q
Sbjct: 191 ------------TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-Q 237
Query: 179 LDKIFKILGTPTEETWEGVS 198
L I ++ G+ T E W V
Sbjct: 238 LALISQLCGSITPEVWPNVD 257
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 436 GAPFTAIREASLLKELKHNNIVTLHDIVHTRST 468
G P TA+RE +L+ LKH N+V L +I T+++
Sbjct: 58 GFPITALREIKILQLLKHENVVNLIEICRTKAS 90
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 82 DSPF-GKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQ-EEEGITL 132
+ PF + Y KL ++G+G++ VFK T Q VALK++ ++ E+EG +
Sbjct: 9 ECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 61
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
RE S LK L+H +I+ L+D++ T + + V EY +L Y+ + R F Q
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQ-Q 116
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ + YCHR +I+HRD+KP+NLL+ D+ N+++ F L
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLD--DNLNVKIADFGL 154
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEY 475
RE S LK L+H +I+ L+D++ T + + V EY
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L + Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP- 189
T WYR P+V+L S +YS ++D+W GCIL E+ P FPG R+ QL IF I+GTP
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG-RDYRHQLLLIFGIIGTPH 243
Query: 190 TEETWEGVSLLPGYNVHRDAP-YTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPM 248
++ + + P Y L FPR+ P+G + L A +
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN--PKGIDLLQRMLVFDPAKRITAK 301
Query: 249 E----------HVHNCEKEGGNGPKNGAPFTAIREASLLKELK 281
E H N E EG P + F +EA K+LK
Sbjct: 302 EALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLK 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHNI 325
+RE +LK KH NI+T+ +I S F + E + TDL + + DH I
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--I 114
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ F++Q LR + H ++HRD+KP NLLI+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 127 EEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL 186
E T WYR P+V+L S +YS ++D+W GCIL E+ P FPG R+ QL IF I+
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG-RDYRHQLLLIFGII 239
Query: 187 GTP-TEETWEGVSLLPGYNVHRDAP-YTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAI 244
GTP ++ + + P Y L FPR+ P+G + L A
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN--PKGIDLLQRMLVFDPAKR 297
Query: 245 LNPME----------HVHNCEKEGGNGPKNGAPFTAIREASLLKELK 281
+ E H N E EG P + F +EA K+LK
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLK 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHNI 325
+RE +LK KH NI+T+ +I S F + E + TDL + + DH I
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--I 114
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ F++Q LR + H ++HRD+KP NLLI+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP- 189
T WYR P+V+L S +YS ++D+W GCIL E+ P FPG R+ QL IF I+GTP
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG-RDYRHQLLLIFGIIGTPH 243
Query: 190 TEETWEGVSLLPGYNVHRDAP-YTGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPM 248
++ + + P Y L FPR+ P+G + L A +
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN--PKGIDLLQRMLVFDPAKRITAK 301
Query: 249 E----------HVHNCEKEGGNGPKNGAPFTAIREASLLKELK 281
E H N E EG P + F +EA K+LK
Sbjct: 302 EALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLK 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHN 324
+RE +LK KH NI+T+ +I S F + E + TDL + + DH
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-- 113
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
I+ F++Q LR + H ++HRD+KP NLLI+
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 249
Query: 191 EETWEGVS 198
E + +S
Sbjct: 250 AELLKKIS 257
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 124 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 249
Query: 191 EETWEGVS 198
E + +S
Sbjct: 250 AELLKKIS 257
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 263 KNGAPFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DL 309
K PF +I RE LLK +KH N++ L D+ RS F Y+ T DL
Sbjct: 60 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 119
Query: 310 SQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 120 NNIVKCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 239
Query: 191 EETWEGVS 198
E + +S
Sbjct: 240 AELLKKIS 247
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 263 KNGAPFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DL 309
K PF +I RE LLK +KH N++ L D+ RS F Y+ T DL
Sbjct: 54 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 310 SQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 NNIVKCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 248
Query: 191 EETWEGVS 198
E + +S
Sbjct: 249 AELLKKIS 256
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 263 KNGAPFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DL 309
K PF +I RE LLK +KH N++ L D+ RS F Y+ T DL
Sbjct: 59 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 118
Query: 310 SQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 119 NNIVKCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 253
Query: 191 EETWEGVS 198
E + +S
Sbjct: 254 AELLKKIS 261
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 68 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 127
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 128 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 170
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250
Query: 191 EETWEGVS 198
E + +S
Sbjct: 251 AELLKKIS 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 125 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 248
Query: 191 EETWEGVS 198
E + +S
Sbjct: 249 AELLKKIS 256
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 123 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLAR 178
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 248
Query: 191 EETWEGVS 198
E + +S
Sbjct: 249 AELLKKIS 256
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 123 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLAR 178
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KXQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 239
Query: 191 EETWEGVS 198
E + +S
Sbjct: 240 AELLKKIS 247
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 KCAKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 239
Query: 191 EETWEGVS 198
E + +S
Sbjct: 240 AELLKKIS 247
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 118 KXQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLAR 173
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 266
Query: 191 EETWEGVS 198
E + +S
Sbjct: 267 AELLKKIS 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 81 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 141 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250
Query: 191 EETWEGVS 198
E + +S
Sbjct: 251 AELLKKIS 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 125 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250
Query: 191 EETWEGVS 198
E + +S
Sbjct: 251 AELLKKIS 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 125 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 263
Query: 191 EETWEGVS 198
E + +S
Sbjct: 264 AELLKKIS 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 138 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 263 KNGAPFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DL 309
K PF +I RE LLK +KH N++ L D+ RS F Y+ T DL
Sbjct: 54 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 310 SQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 NNIVKCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 248
Query: 191 EETWEGVS 198
E + +S
Sbjct: 249 AELLKKIS 256
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 123 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 249
Query: 191 EETWEGVS 198
E + +S
Sbjct: 250 AELLKKIS 257
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 124 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLAR 179
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 242
Query: 191 EETWEGVS 198
E + +S
Sbjct: 243 AELLKKIS 250
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 57 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 116
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 117 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 159
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250
Query: 191 EETWEGVS 198
E + +S
Sbjct: 251 AELLKKIS 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 125 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 245
Query: 191 EETWEGVS 198
E + +S
Sbjct: 246 AELLKKIS 253
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 120 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 239
Query: 191 EETWEGVS 198
E + +S
Sbjct: 240 AELLKKIS 247
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 114 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 240
Query: 191 EETWEGVS 198
E + +S
Sbjct: 241 AELLKKIS 248
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 55 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 115 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 262
Query: 191 EETWEGVS 198
E + +S
Sbjct: 263 AELLKKIS 270
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 137 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 245
Query: 191 EETWEGVS 198
E + +S
Sbjct: 246 AELLKKIS 253
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 120 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLAR 175
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 254
Query: 191 EETWEGVS 198
E + +S
Sbjct: 255 AELLKKIS 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 129 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLAR 184
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 263
Query: 191 EETWEGVS 198
E + +S
Sbjct: 264 AELLKKIS 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 138 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 118 KSQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLCR 173
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 249
Query: 191 EETWEGVS 198
E + +S
Sbjct: 250 AELLKKIS 257
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 124 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 254
Query: 191 EETWEGVS 198
E + +S
Sbjct: 255 AELLKKIS 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 129 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 241
Query: 191 EETWEGVS 198
E + +S
Sbjct: 242 AELLKKIS 249
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 56 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 115
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 116 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 158
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 240
Query: 191 EETWEGVS 198
E + +S
Sbjct: 241 AELLKKIS 248
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 55 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 115 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 245
Query: 191 EETWEGVS 198
E + +S
Sbjct: 246 AELLKKIS 253
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 120 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 255
Query: 191 EETWEGVS 198
E + +S
Sbjct: 256 AELLKKIS 263
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 263 KNGAPFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DL 309
K PF +I RE LLK +KH N++ L D+ RS F Y+ T DL
Sbjct: 66 KLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 310 SQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 126 NNIVKCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 243
Query: 191 EETWEGVS 198
E + +S
Sbjct: 244 AELLKKIS 251
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 118 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 266
Query: 191 EETWEGVS 198
E + +S
Sbjct: 267 AELLKKIS 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 81 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 141 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 245
Query: 191 EETWEGVS 198
E + +S
Sbjct: 246 AELLKKIS 253
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 120 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 255
Query: 191 EETWEGVS 198
E + +S
Sbjct: 256 AELLKKIS 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 130 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 263
Query: 191 EETWEGVS 198
E + +S
Sbjct: 264 AELLKKIS 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 138 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 255
Query: 191 EETWEGVS 198
E + +S
Sbjct: 256 AELLKKIS 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVH-TRSTLTFVFEYVHT-----DLSQYM 313
PF +I RE LLK +KH N++ L D+ RS F Y+ T DL+ +
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 130 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + DQL I +++GTP
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 262
Query: 191 EETWEGVS 198
E + +S
Sbjct: 263 AELLKKIS 270
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ +L V + DL+ +
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 137 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++ G FPG + DQL +I +++GTP+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG-SDYIDQLKRIMEVVGTPS 241
Query: 191 EETWEGVS 198
E +S
Sbjct: 242 PEVLAKIS 249
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 272 REASLLKELKHNNIVTLHDI------VHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNI 325
RE LLK LKH N++ L D+ + S + V + DL+ ++ L ++
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHV 125
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++QLLRGL Y H I+HRD+KP N+ ++E +R+ F L R
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLAR 171
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++ G FPG + DQL +I +++GTP+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG-SDYIDQLKRIMEVVGTPS 249
Query: 191 EETWEGVS 198
E +S
Sbjct: 250 PEVLAKIS 257
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 272 REASLLKELKHNNIVTLHDI------VHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNI 325
RE LLK LKH N++ L D+ + S + V + DL+ ++ S L ++
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--SQALSDEHV 133
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++QLLRGL Y H I+HRD+KP N+ ++E +R+ F L R
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DSELRILDFGLAR 179
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T WYR P+++L Y+ ++D+W VGCI+ E++ G FPG + DQL +I +++GTP+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG-SDYIDQLKRIMEVVGTPS 249
Query: 191 EETWEGVS 198
E +S
Sbjct: 250 PEVLAKIS 257
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 272 REASLLKELKHNNIVTLHDI------VHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNI 325
RE LLK LKH N++ L D+ + S + V + DL+ ++ L ++
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHV 133
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++QLLRGL Y H I+HRD+KP N+ ++E +R+ F L R
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DSELRILDFGLAR 179
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T WYR P+V+L Y+ ++D+W VGCI+ EM+TG F G + DQL +I K+ GTP
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTP 245
Query: 190 TEE 192
E
Sbjct: 246 PAE 248
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE LLK ++H N++ L D+ TL V ++ TDL + M+ G D
Sbjct: 71 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR- 129
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
I+ ++Q+L+GL Y H I+HRD+KP NL ++E +++ F L R
Sbjct: 130 -IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLAR 176
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+YR P+VLLG Y ++DMW +GCIL+EM TG P F G EV DQ++KI ++LG P
Sbjct: 223 FYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEV-DQMNKIVEVLGIP 277
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+YR P+VLLG Y ++DMW +GCIL+EM TG P F G EV DQ++KI ++LG P
Sbjct: 223 FYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEV-DQMNKIVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+YR P+VLLG Y ++DMW +GCIL+EM TG P F G EV DQ++KI ++LG P
Sbjct: 204 FYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEV-DQMNKIVEVLGIP 258
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T WYR P+V+L Y+ ++D+W VGCI+ EM+TG F G ++ DQL +I K+ G P
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVP 243
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNK-LGLTFPR 222
E + ++ + + P T K FPR
Sbjct: 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 277
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE LLK ++H N++ L D+ S+L V ++ TDL + M
Sbjct: 70 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
I+ ++Q+L+GL Y H ++HRD+KP NL ++E
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 161
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 441 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVL 477
A RE LLK ++H N++ L D+ S+L +++ L
Sbjct: 70 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 106
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T WYR P+V+L Y+ ++D+W VGCI+ EM+TG F G ++ DQL +I K+ G P
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVP 261
Query: 190 TEE 192
E
Sbjct: 262 GTE 264
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE LLK ++H N++ L D+ S+L V ++ TDL + M
Sbjct: 88 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME---FSEE 144
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
I+ ++Q+L+GL Y H ++HRD+KP NL ++E
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 179
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 441 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVL 477
A RE LLK ++H N++ L D+ S+L +++ L
Sbjct: 88 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 250 HVHNCEKEGGNGPKNGAPFTAIR----------EASLLKELKHNNIVTLHDIVHTRSTLT 299
VH CE E G K A R E S++ +L H N++ L+D +++ +
Sbjct: 104 QVHKCE-ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIV 162
Query: 300 FVFEYVHTDLSQYMER---HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
V EYV D + +R S L + LFM Q+ G+ + H+ ILH D+KP+N+L
Sbjct: 163 LVMEYV--DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILC 220
Query: 357 SEIDHHNIRLFMFQLLR 373
D I++ F L R
Sbjct: 221 VNRDAKQIKIIDFGLAR 237
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 444 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
E S++ +L H N++ L+D +++ + V EYV
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE +L H NIV++ D+ V EY+ LS+Y+E H G L F
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINFTN 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+L G+ + H RI+HRD+KPQN+LI + +++F F + + LS
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDS--NKTLKIFDFGIAKALS 162
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 84/224 (37%), Gaps = 60/224 (26%)
Query: 59 LKLADFGLARAKSVPSHTYSHQGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVA 118
+K+ DFGLAR P + S SP + D + F NL Q+
Sbjct: 195 VKVCDFGLARTVDYPENGNSQLPISP--------REDDMN----LVTFPHTKNLKRQLTG 242
Query: 119 LKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGL-----------P 167
+T WYR P+++L Y+ ++D+W +GCI E++ + P
Sbjct: 243 ---------HVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGP 293
Query: 168 TFPG-------------------VREVYDQLDKIFKILGTPTEETWEGVSLLPGYNVHRD 208
FPG R DQL+ IF ILGTP+EE E + R
Sbjct: 294 LFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353
Query: 209 APY-TGNKLGLTFPRLYDIPEGESMASAFLQVRDAAILNPMEHV 251
P G L FP S A A ++ + NP + +
Sbjct: 354 FPKREGTDLAERFP--------ASSADAIHLLKRMLVFNPNKRI 389
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHNI 325
+RE ++L L H+++V + DIV + F V E +D + R L +I
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF-RTPVYLTELHI 158
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
+ ++ LL G+ Y H ILHRD+KP N L+++ ++++ F L R + Y
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ--DCSVKVCDFGLARTVDY 208
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
I+ ++ LL G+ Y H ILHRD+KP N L+++
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ 191
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 272 REASLLKELKHN-NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRL 327
RE +L+ L+ NI+TL DIV T VFE+V+ TD Q + L ++IR
Sbjct: 80 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRF 135
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
+M+++L+ L YCH I+HRDVKP N++I +H +RL + L
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LG TE+
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TED 253
Query: 193 TWEGVSLLPGYNVHRDAPYTGNKLG 217
++ + YN+ D P + LG
Sbjct: 254 LYDYID---KYNIELD-PRFNDILG 274
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE LK +H +I+ L+ ++ T S + V EYV +L Y+ + +G LD R
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQ 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+L G+ YCHR ++HRD+KP+N+L+ H N ++ F L +S
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMS 167
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 124 LQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIF 183
+ E E +T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+
Sbjct: 181 MMEPEVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVI 238
Query: 184 KILGTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ LGTP E + + V Y G FP + + E Q RD
Sbjct: 239 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR--GLSYCHRR 381
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R G S+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMEP 184
Query: 382 RILHR 386
++ R
Sbjct: 185 EVVTR 189
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 128 EGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILG 187
E +T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LG
Sbjct: 185 EVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLG 242
Query: 188 TPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
TP E + + V Y G FP + + E A Q RD
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARD 296
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR--GLSYCHRR 381
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R G S+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTP 184
Query: 382 RILHR 386
++ R
Sbjct: 185 EVVTR 189
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 225 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 282
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 164
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLAR 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 225 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 282
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 164
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLAR 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 188 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 245
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 276
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 127
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 245
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 276
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 127
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLAR 174
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
T WYR P+++L Y+ ++D+W VGCI+ E++TG FPG + +QL +I ++ GTP
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHI-NQLQQIMRLTGTP 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 267 PFTAI-------REASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYM 313
PF +I RE LLK +KH N++ L D+ ++L V + DL+ +
Sbjct: 87 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV 146
Query: 314 ERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ DH ++ ++Q+LRGL Y H I+HRD+KP NL ++E
Sbjct: 147 KCQKLTDDH--VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 189
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 186 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 243
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 274
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 69 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 125
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 126 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 237
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 268
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 119
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 120 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 153
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 237
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 268
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHE 119
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 238
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 120
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 154
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTP 238
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLY 224
E + + V Y GLTFP+L+
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYA----GLTFPKLF 269
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI++L ++ + TL V E + +L Q ++ LDH
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHE 120
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 154
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L+H NI+ +++ H R + + E+ +L + +++H G D
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFD 112
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
FM +L L YCH R+++HRD+KP+NLL+
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 148
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 332 LLRGLSYCH-RRRI-LHRDVKPQNLLISEIDHHN------IRLFMFQLLRGLSYCHRRRI 383
+LR +Y H R+RI L + P+ L E+ H FM +L L YCH R++
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 384 LHRDVKPQNLLIS 396
+HRD+KP+NLL+
Sbjct: 136 IHRDIKPENLLMG 148
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y PP+++ G T + +D+W G + E + G+P F
Sbjct: 175 TLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L+H NI+ +++ H R + + E+ +L + +++H G D
Sbjct: 55 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFD 113
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
FM +L L YCH R+++HRD+KP+NLL+
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 149
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 332 LLRGLSYCH-RRRI-LHRDVKPQNLLISEIDHHN------IRLFMFQLLRGLSYCHRRRI 383
+LR +Y H R+RI L + P+ L E+ H FM +L L YCH R++
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 384 LHRDVKPQNLLIS 396
+HRD+KP+NLL+
Sbjct: 137 IHRDIKPENLLMG 149
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y PP+++ G T + +D+W G + E + G+P F
Sbjct: 176 TLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L+H NI+ +++ H R + + E+ +L + +++H G D
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFD 112
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
FM +L L YCH R+++HRD+KP+NLL+
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 148
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 332 LLRGLSYCH-RRRI-LHRDVKPQNLLISEIDHHN------IRLFMFQLLRGLSYCHRRRI 383
+LR +Y H R+RI L + P+ L E+ H FM +L L YCH R++
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 384 LHRDVKPQNLLIS 396
+HRD+KP+NLL+
Sbjct: 136 IHRDIKPENLLMG 148
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y PP+++ G T + +D+W G + E + G+P F
Sbjct: 175 TLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL + EY ++ Y+ H G + R
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GRMKEKEARSKFR 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++RI+HRD+K +NLL+ + I F F
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF 160
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 433 LPPGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
L P + RE ++K L H NIV L +++ T TL + EY
Sbjct: 53 LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL + EY ++ Y+ H G + R
Sbjct: 60 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GRMKEKEARSKFR 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++RI+HRD+K +NLL+ + I F F
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF 157
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 433 LPPGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
L P + RE ++K L H NIV L +++ T TL + EY
Sbjct: 50 LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 93
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 48 FLNKYATPPRELKLADFGLARAKS---VPSHTYSHQGDSP----FGKADAYIKLDQLGEG 100
+ + A PP +K+ F L R+ +PS H+ P +AD +KL G
Sbjct: 120 YRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA 179
Query: 101 SYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILI 160
K S V + + +YR P+++ G+ Y+T++D+W VGCI
Sbjct: 180 ------KKLSPSEPNVAYI----------CSRYYRAPELIFGNQHYTTAVDIWSVGCIFA 223
Query: 161 EMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTF 220
EM+ G P F G QL +I ++LG P+ E ++ H D +K G+ +
Sbjct: 224 EMMLGEPIFRGDNSA-GQLHEIVRVLGCPSREVLRKLN-----PSHTDVDLYNSK-GIPW 276
Query: 221 PRLY------DIPEGESMASAFLQVRDAAILNPME 249
++ D E + SA LQ + P E
Sbjct: 277 SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYE 311
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 272 REASLLKELK---HNNIVTLHDIVHTRST-------LTFVFEYV----HTDLSQYMERHS 317
RE ++++L H NIV L +T L V EYV H Y R
Sbjct: 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQV 124
Query: 318 GGLDHHNIRLFMFQLLRGLSYCH--RRRILHRDVKPQNLLISEID 360
I++F+FQL+R + H + HRD+KP N+L++E D
Sbjct: 125 AP-PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD 168
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 342 RRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCH--RRRILHRDVKPQNLLISE 397
R R V P +LI ++F+FQL+R + H + HRD+KP N+L++E
Sbjct: 117 RNYYRRQVAPPPILI--------KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE 166
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N+LI +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVLIDH-EHRKLRLIDWGL 178
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N+LI
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID 165
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLAR 174
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLAR 174
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK--SDATLKILDFGLAR 174
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 153
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 154 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 183
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 129 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 170
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 261 GPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDLSQYMERHSGG 319
KN T +RE LLK+L H NI+ L +I+ S+ V E Y +L + +
Sbjct: 59 SAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF 118
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQLLRGLSYC 378
+H R+ Q+ G++Y H+ I+HRD+KP+N+L+ S+ +I++ F GLS C
Sbjct: 119 SEHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF----GLSTC 173
Query: 379 HRRRILHRD 387
++ +D
Sbjct: 174 FQQNTKMKD 182
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKI 182
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L ++
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRV 234
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 440 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE 474
T +RE LLK+L H NI+ L +I+ S+ V E
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 124 LQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIF 183
+ E E +T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+
Sbjct: 181 MMEPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPG-RDYIDQWNKVI 238
Query: 184 KILGTPTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ LGTP + + V Y G FP + + E Q RD
Sbjct: 239 EQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR--GLSYCHRR 381
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R G S+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMEP 184
Query: 382 RILHR 386
++ R
Sbjct: 185 EVVTR 189
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 147
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 148 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 177
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 164
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 146
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 147 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 176
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 122 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 163
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 147
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 148 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 177
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 164
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
L + ++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 189 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 246
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
E + + V Y G FP + + E Q RD
Sbjct: 247 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 128
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 129 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 124 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
E + + V Y G FP + + E Q RD
Sbjct: 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+TL DIV T VFE+V+ TD Q + L ++IR +M+++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
I+HRDVKP N++I +H +RL + L
Sbjct: 149 SMGIMHRDVKPHNVMIDH-EHRKLRLIDWGL 178
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F + YDQL +I K+LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR +M+++L+ L YCH I+HRDVKP N++I
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 245
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
E + + V Y G FP + + E Q RD
Sbjct: 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 297
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 127
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTP 238
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
E + + V Y G FP + + E Q RD
Sbjct: 239 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 120
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y+ ++D+W VGCI+ E+V G F G + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + V Y G K FP E E Q RD
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARD 296
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE LLK + H NI++L ++ + TL V E + +L Q + LDH
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ EMV FPG R+ DQ +K+ + LGTP
Sbjct: 192 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTP 249
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
E + + V Y G FP + + E Q RD
Sbjct: 250 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +L Q ++ LDH
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHE 131
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 132 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 358 EIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 127 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDLSQYMERHSGGL 320
KN T +RE LLK+L H NI+ L +I+ S+ V E Y +L + +
Sbjct: 60 AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQLLRGLSYCH 379
+H R+ Q+ G++Y H+ I+HRD+KP+N+L+ S+ +I++ F GLS C
Sbjct: 120 EHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF----GLSTCF 174
Query: 380 RRRILHRD 387
++ +D
Sbjct: 175 QQNTKMKD 182
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKI 182
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L ++
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRV 234
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 440 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE 474
T +RE LLK+L H NI+ L +I+ S+ V E
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDLSQYMERHSGGL 320
KN T +RE LLK+L H NI+ L +I+ S+ V E Y +L + +
Sbjct: 60 AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQLLRGLSYCH 379
+H R+ Q+ G++Y H+ I+HRD+KP+N+L+ S+ +I++ F GLS C
Sbjct: 120 EHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF----GLSTCF 174
Query: 380 RRRILHRD 387
++ +D
Sbjct: 175 QQNTKMKD 182
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKI 182
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L ++
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRV 234
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 440 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFE 474
T +RE LLK+L H NI+ L +I+ S+ V E
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE ++L+E++H NI+TLHDI ++ + + E V +L ++ E+ S L F+
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 135
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Q+L G+ Y H +RI H D+KP+N+++ + + N R+
Sbjct: 136 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 172
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++L+E++H NI+TLHDI ++ + + E V
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELV 111
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q++ + YCH++ I+HRD+K +NLL+
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLD 148
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 433 LPPGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
L P + RE ++K L H NIV L +++ T TL V EY
Sbjct: 53 LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYA 96
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE ++L+E++H NI+TLHDI ++ + + E V +L ++ E+ S L F+
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Q+L G+ Y H +RI H D+KP+N+++ + + N R+
Sbjct: 122 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 158
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++L+E++H NI+TLHDI ++ + + E V
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELV 97
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE ++L+E++H NI+TLHDI ++ + + E V +L ++ E+ S L F+
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 114
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Q+L G+ Y H +RI H D+KP+N+++ + + N R+
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++L+E++H NI+TLHDI ++ + + E V
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDVVLILELV 90
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFR 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++K L H NIV L +++ T TL V EY ++ Y+ H G + R
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GWMKEKEARAKFR 113
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q++ + YCH++ I+HRD+K +NLL+
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLD 140
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE ++K L H NIV L +++ T TL V EY
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 88
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 61/204 (29%)
Query: 22 LLDADIAEETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQG 81
LL + E+ ++ R+ KP + LN+ + +K+ DFGLAR T + +
Sbjct: 139 LLGENFIHESGIIHRDLKP----ANCLLNQDCS----VKVCDFGLAR-------TINSEK 183
Query: 82 DSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLL 141
D+ ++ L E NL Q+ + +T WYR P+++L
Sbjct: 184 DTNI--------VNDLEENEEPGPHN--KNLKKQLTS---------HVVTRWYRAPELIL 224
Query: 142 GSTEYSTSLDMWGVGCILIEMVTGL-----------PTFPG-----------VREVY--- 176
Y+ S+D+W GCI E++ L P FPG ++V+
Sbjct: 225 LQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKS 284
Query: 177 --DQLDKIFKILGTPTEETWEGVS 198
DQL+ IF I+GTPTE+ + ++
Sbjct: 285 NRDQLNIIFNIIGTPTEDDLKNIN 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHNI 325
+RE ++L LK + I+ L+D++ L F V E +DL + + + H I
Sbjct: 73 LREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEH-I 131
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ ++ LL G ++ H I+HRD+KP N L+++
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
I+ ++ LL G ++ H I+HRD+KP N L+++
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 80 QGDSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGI 130
QG D YI +G GSY V+ Y T + VA+K++ E+ I
Sbjct: 17 QGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI 67
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+V+LG+ Y +DMW +GCIL E++TG P PG E DQL + ++LG P+++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQK 321
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTF------VFEYVHTDLSQYMERHS-GGLDH 322
A E +L+ L+ + +++H TF FE + +L + ++++ G
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+R F +L+ L H+ RI+H D+KP+N+L+ + I++ F
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIR 123
Y L +G+GS+ V K Y + +Q VALK +R
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR 131
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+V+LG+ Y +DMW +GCIL E++TG P PG E DQL + ++LG P+++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQK 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTF------VFEYVHTDLSQYMERHS-GGLDH 322
A E +L+ L+ + +++H TF FE + +L + ++++ G
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+R F +L+ L H+ RI+H D+KP+N+L+ + I++ F
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIR 123
Y L +G+GS+ V K Y + +Q VALK +R
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR 131
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H+N++TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H+N++TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+ L D V T VFEY++ TD Q + L +IR +M++LL+ L YCH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCH 149
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRL 366
+ I+HRDVKP N++ IDH +L
Sbjct: 150 SKGIMHRDVKPHNVM---IDHQQKKL 172
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+IR +M++LL+ L YCH + I+HRDVKP N++I
Sbjct: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F ++ YDQL +I K+LGT
Sbjct: 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 252
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE LK +H +I+ L+ ++ T + V EYV +L Y+ +H G ++ R
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLFQ 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+L + YCHR ++HRD+KP+N+L+ H N ++ F L +S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMS 162
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE LK +H +I+ L+ ++ T + V EYV +L Y+ +H G ++ R
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLFQ 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+L + YCHR ++HRD+KP+N+L+ H N ++ F L +S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMS 162
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H+N++TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H+N++TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 284 NIVTLHDIVH--TRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NI+ L D V T VFEY++ TD Q + L +IR +M++LL+ L YCH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCH 154
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRL 366
+ I+HRDVKP N++ IDH +L
Sbjct: 155 SKGIMHRDVKPHNVM---IDHQQKKL 177
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+IR +M++LL+ L YCH + I+HRDVKP N++I
Sbjct: 138 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ Y SLDMW +GC+L M+ F ++ YDQL +I K+LGT
Sbjct: 202 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H+N++TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H+N++TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
+YR P+V+LG+ Y +DMW +GCIL E++TG P PG E DQL + ++LG P ++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPXQK 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTF------VFEYVHTDLSQYMERHS-GGLDH 322
A E +L+ L+ + +++H TF FE + +L + ++++ G
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+R F +L+ L H+ RI+H D+KP+N+L+ + I++ F
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H+N++TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H+N++TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H+N++TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H+N++TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 178
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 167
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 195 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 178
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 167
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 195 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
RE + K L H NIV L +++ T TL V EY ++ Y+ H G R
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH-GRXKEKEARAKF 119
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ + YCH++ I+HRD+K +NLL+ + I F F
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGF 159
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 442 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE + K L H NIV L +++ T TL V EY
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYA 95
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L+H NI+ L+ H + + + EY ++ + +++ S D
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FD 111
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 174 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L+H NI+ L+ H + + + EY ++ + +++ S D
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FD 111
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 174 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMF 330
E SLLK L H NI+ L D+ + V E+ Q + RH D + M
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMK 153
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDH-HNIRLFMFQL 371
Q+L G+ Y H+ I+HRD+KP+N+L+ + NI++ F L
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 120 KEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
K+ +L++ G T +Y P+VL +Y+ D+W G I+ ++ G P F G
Sbjct: 201 KDYKLRDRLG-TAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLS-QYMERHSGGLDHHNIRL-- 327
REAS+ LKH +IV L + + L VFE++ DL + ++R G +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+M Q+L L YCH I+HRDVKP+N+L++
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLA 164
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
RE S+L+++ H NI+TLHD+ R+ + + E V +L ++ + L F+
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H ++I H D+KP+N+++
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIML 148
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+L+++ H NI+TLHD+ R+ + + E V
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELV 97
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 111
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 156
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 106 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 145
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 173 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 65 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 124
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 158
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 119 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 158
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 186 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 146
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 174 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILV 154
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILV 178
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 146
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+ + G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 174 TLDYLPPEXIEGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 50 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 109
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 154
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 143
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 171 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 142
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 170 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VG I+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK--SDATLKILDFGLAR 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILV 147
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 142
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 170 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 142
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 170 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 58 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVE 146
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 50 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 109
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF 154
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 143
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 171 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VG I+ EM+ G FPG + DQ +K+ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP 244
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + + V Y G FP + + E Q RD
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE L+K + H NI+ L ++ + +L V E + +LSQ ++ LDH
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHE 126
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR--GLSYCHRR 381
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R G S+
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK--SDATLKILDFGLARTAGTSFMMTP 184
Query: 382 RILHR 386
++ R
Sbjct: 185 YVVTR 189
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
D ++ E+DH + ++Q+L G+ + H I+HRD+KP N+++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVE 153
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILV 147
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 47 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 106
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 107 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF 151
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 101 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 140
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 168 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVE 148
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 66 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVE 154
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVE 151
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH +R++HRD+KP+NLL+ I F
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF 155
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 59 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVE 147
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 141
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 271 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYVH-TDLSQYMERHSGG---LDHHN 324
+ E +LL+ELKH NIV +D I T +TL V EY DL+ + + + LD
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 325 IRLFMFQLLRGLSYCHRRR-----ILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
+ M QL L CHRR +LHRD+KP N+ + N++L F L R L++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNH 168
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 442 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYV 476
+ E +LL+ELKH NIV +D I T +TL V EY
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+ + Y+ D+W +GC+L E+ +P F
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 146
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 146
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 174 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 271 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYVH-TDLSQYMERHSGG---LDHHN 324
+ E +LL+ELKH NIV +D I T +TL V EY DL+ + + + LD
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 325 IRLFMFQLLRGLSYCHRRR-----ILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
+ M QL L CHRR +LHRD+KP N+ + N++L F L R L++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNH 168
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 442 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYV 476
+ E +LL+ELKH NIV +D I T +TL V EY
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+ + Y+ D+W +GC+L E+ +P F
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVE 152
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILV 165
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 45 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 104
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 QRTATYITELANALSYCHSKRVIHRDIKPENLLLG 139
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 99 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 139
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 166 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 144
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F +E Y ++ ++
Sbjct: 172 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVE 166
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 271 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYVH-TDLSQYMERHSGG---LDHHN 324
+ E +LL+ELKH NIV +D I T +TL V EY DL+ + + + LD
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 325 IRLFMFQLLRGLSYCHRRR-----ILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
+ M QL L CHRR +LHRD+KP N+ + N++L F L R L++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNH 168
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 442 IREASLLKELKHNNIVTLHD--IVHTRSTLTFVFEYV 476
+ E +LL+ELKH NIV +D I T +TL V EY
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+ + Y+ D+W +GC+L E+ +P F
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 58/204 (28%)
Query: 22 LLDADIAEETRVLLRNRKPPRPKSEVFLNKYATPPRELKLADFGLARAKSVPSHTYSHQG 81
LL E+ ++ R+ KP + LN+ + +K+ DFGLAR +
Sbjct: 141 LLGEKFIHESGIIHRDLKP----ANCLLNQDCS----VKICDFGLARTIN---------- 182
Query: 82 DSPFGKADAYIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLL 141
D +I D + NL Q+ + +T WYR P+++L
Sbjct: 183 ----SDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS---------HVVTRWYRAPELIL 229
Query: 142 GSTEYSTSLDMWGVGCILIEMVTGL-----------PTFPG-----------VREVY--- 176
Y+ S+D+W GCI E++ + P FPG ++V+
Sbjct: 230 LQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKS 289
Query: 177 --DQLDKIFKILGTPTEETWEGVS 198
DQL+ IF ++GTP EE + ++
Sbjct: 290 NRDQLNIIFNVIGTPPEEDLKCIT 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTF-----VFEYVHTDLSQYMERHSGGLDHHNI 325
+RE ++L LK + I+ LHD++ L F V E +DL + + + H +
Sbjct: 75 LREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQH-V 133
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ ++ LL G + H I+HRD+KP N L+++ ++++ F L R ++
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLNQ--DCSVKICDFGLARTIN 182
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 130 ITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
+T +YR P+V+LG Y ++D+W VGCI+ E+V G F G + DQ +K+ + LGTP
Sbjct: 185 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTP 242
Query: 190 TEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGESMASAFLQVRD 241
+ E + V Y G FP E E Q RD
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARD 294
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEYVHTDLSQYMERHSGGLDHH 323
A RE LLK + H NI++L ++ + TL V E + +L Q + LDH
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHE 124
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ ++Q+L G+ + H I+HRD+KP N+++ +++ F L R S
Sbjct: 125 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAS 175
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + E++ + L +Y+++H +DH + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVE 151
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y++ H+ +DH + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HRD+ +N+L+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVE 151
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE 111
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 145
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 106 LSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 145
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G+P F +E Y ++ ++
Sbjct: 173 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE 111
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 145
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S D ++ +L LSYCH +R++HRD+KP+NLL+
Sbjct: 106 LSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 145
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G+P F +E Y ++ ++
Sbjct: 173 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
K G RE + L+H NI+ L+ H + + + EY + D
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
++ +L LSYCH ++++HRD+KP+NLL+ I F
Sbjct: 108 QRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADF 152
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 356 ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+S+ D ++ +L LSYCH ++++HRD+KP+NLL+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLL 141
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG--VREVYDQLDKI 182
TL Y PP+++ G + +D+W +G + E + G P F ++ Y ++ ++
Sbjct: 169 TLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 144
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 145 SQGIMHRDVKPHNVMID 161
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 354 LLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L + ++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 119 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 161
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 163
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 164 SQGIMHRDVKPHNVMID 180
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 354 LLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L + ++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 138 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 180
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 143
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 144 SQGIMHRDVKPHNVMID 160
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 354 LLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L + ++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 143
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 144 SQGIMHRDVKPHNVMID 160
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 354 LLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L + ++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 118 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 284 NIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
NIV L DIV + T + +FEYV+ TD L ++IR ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 341 RRRILHRDVKPQNLLIS 357
+ I+HRDVKP N++I
Sbjct: 143 SQGIMHRDVKPHNVMID 159
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++IR ++++LL+ L YCH + I+HRDVKP N++I
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
+++ P++L+ +Y SLDMW +GC+ M+ F + +DQL KI K+LGT
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 119
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIML 146
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELV 95
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 119
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIML 146
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELV 95
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 258 GGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVH--TRSTLTFVFEYVHTDLSQYMER 315
GG G +E ++LK+L H N+V L +++ L VFE V+ ME
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEV 128
Query: 316 HS-GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ L R + L++G+ Y H ++I+HRD+KP NLL+ E H I F
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADF 181
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + L++G+ Y H ++I+HRD+KP NLL+ E
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELV 96
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
RE +LK L+H+NIV + ++ R L + EY+ + L Y+++H +DH + +
Sbjct: 61 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 120
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ +G+ Y +R +HR++ +N+L+
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVE 149
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 278 KELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMFQLLRG 335
+ L+H NIV +++ T + L + EY + ER ++G R F QLL G
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASG--GELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 336 LSYCHRRRILHRDVKPQNLLI 356
+SYCH +I HRD+K +N L+
Sbjct: 129 VSYCHSMQICHRDLKLENTLL 149
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYM-ERHSGGLDHHNIRLFM 329
RE S+LKE++H N++TLH++ ++ + + E V +L ++ E+ S L F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G+ Y H +I H D+KP+N+++
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML 147
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
RE S+LKE++H N++TLH++ ++ + + E V
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELV 96
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDL-SQYMERHSGGLDHHNIRLF 328
+RE LLK+L H NI+ L++ + V E Y +L + + R +
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARI 155
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
+ Q+L G++Y H+ +I+HRD+KP+NLL+ S+ NIR+ F L
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 199
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L K+ K T
Sbjct: 215 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKYTFE 271
Query: 191 EETWEGVS 198
W+ VS
Sbjct: 272 LPQWKKVS 279
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYME----RHSGGLDHHNIR 326
+RE LLK+L H NI+ L++ + V E V+T + E + +D I
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVDAARI- 154
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
+ Q+L G++Y H+ +I+HRD+KP+NLL+ S+ NIR+ F L
Sbjct: 155 --IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 198
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L K+ K T
Sbjct: 214 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKYTFE 270
Query: 191 EETWEGVS 198
W+ VS
Sbjct: 271 LPQWKKVS 278
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYME----RHSGGLDHHNIR 326
+RE LLK+L H NI+ L++ + V E V+T + E + +D I
Sbjct: 80 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVDAARI- 137
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
+ Q+L G++Y H+ +I+HRD+KP+NLL+ S+ NIR+ F L
Sbjct: 138 --IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 181
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L K+ K T
Sbjct: 197 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKYTFE 253
Query: 191 EETWEGVS 198
W+ VS
Sbjct: 254 LPQWKKVS 261
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYVHTD-LSQYMERH 316
+GP F RE +LK L + IV + + R +L V EY+ + L +++RH
Sbjct: 63 SGPDQQRDFQ--REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 120
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
LD + L+ Q+ +G+ Y RR +HRD+ +N+L+ H I F
Sbjct: 121 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 171
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + ++L+H NIV LHD + S VF+ V D+ E +S H I+
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQ 112
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L ++YCH I+HR++KP+NLL++
Sbjct: 113 ----QILESIAYCHSNGIVHRNLKPENLLLA 139
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + ++L+H NIV LHD + S VF+ V
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYVHTD-LSQYMERH 316
+GP F RE +LK L + IV + + R +L V EY+ + L +++RH
Sbjct: 50 SGPDQQRDFQ--REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 107
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
LD + L+ Q+ +G+ Y RR +HRD+ +N+L+ H I F
Sbjct: 108 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 158
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYME----RHSGGLDHHNIR 326
+RE LLK+L H NI+ L++ + V E V+T + E + +D I
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVDAARI- 131
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
+ Q+L G++Y H+ +I+HRD+KP+NLL+ S+ NIR+ F L
Sbjct: 132 --IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L K+ K T
Sbjct: 191 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKYTFE 247
Query: 191 EETWEGVS 198
W+ VS
Sbjct: 248 LPQWKKVS 255
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYVHTD-LSQYMERH 316
+GP F RE +LK L + IV + + R +L V EY+ + L +++RH
Sbjct: 51 SGPDQQRDFQ--REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 108
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
LD + L+ Q+ +G+ Y RR +HRD+ +N+L+ H I F
Sbjct: 109 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 159
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLS-QYMERHSGGLDHHNIRL-- 327
REAS+ LKH +IV L + + L VFE++ DL + ++R G +
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+M Q+L L YCH I+HRDVKP +L++
Sbjct: 137 YMRQILEALRYCHDNNIIHRDVKPHCVLLA 166
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + ++L+H NIV LHD + S VF+ V D+ E +S H I+
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQ 111
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L ++YCH I+HR++KP+NLL++
Sbjct: 112 ----QILESIAYCHSNGIVHRNLKPENLLLA 138
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + ++L+H NIV LHD + S VF+ V
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 86
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + ++L+H NIV LHD + S VF+ V D+ E +S H I+
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQ 112
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L ++YCH I+HR++KP+NLL++
Sbjct: 113 ----QILESIAYCHSNGIVHRNLKPENLLLA 139
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + ++L+H NIV LHD + S VF+ V
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLS-QYMERHSGGLDHHNIRL-- 327
REAS+ LKH +IV L + + L VFE++ DL + ++R G +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+M Q+L L YCH I+HRDVKP +L++
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLA 164
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 271 IREASLLKELKHNNIVTLHDI-VH----TRSTLTFVFEYVHTDLSQYMERHSGGLDHHNI 325
+RE LL H NI+ L DI VH L V E + TDL+Q + + +I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ FM+ +L GL H ++HRD+ P N+L++ D+++I + F L R
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAR 182
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
WYR P++++ ++ +DMW GC++ EM F G Y+QL+KI +++GTP E
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG-STFYNQLNKIVEVVGTPKIE 256
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 271 IREASLLKELKHNNIVTLHDI-VH----TRSTLTFVFEYVHTDLSQYMERHSGGLDHHNI 325
+RE LL H NI+ L DI VH L V E + TDL+Q + + +I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ FM+ +L GL H ++HRD+ P N+L++ D+++I + F L R
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAR 182
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEE 192
WYR P++++ ++ +DMW GC++ EM F G Y+QL+KI +++GTP E
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG-STFYNQLNKIVEVVGTPKIE 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYVHTD-LSQYMERH 316
+GP F RE +LK L + IV + + R L V EY+ + L +++RH
Sbjct: 47 SGPDQQRDFQ--REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH 104
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
LD + L+ Q+ +G+ Y RR +HRD+ +N+L+ H I F
Sbjct: 105 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYM---ERHSGGLDHHNIRL 327
REA + ++L+H NIV LHD + S VF+ V +L + + E +S H I+
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ- 135
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L ++YCH I+HR++KP+NLL++
Sbjct: 136 ---QILESIAYCHSNGIVHRNLKPENLLLA 162
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + ++L+H NIV LHD + S VF+ V
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 110
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
RE + L+H NIV +++ T + L V EY + ER ++G R F
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFF 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
QL+ G+SYCH ++ HRD+K +N L+
Sbjct: 122 QQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
RE + L+H NIV +++ T + L V EY + ER ++G R F
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFF 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
QL+ G+SYCH ++ HRD+K +N L+
Sbjct: 122 QQLISGVSYCHAMQVCHRDLKLENTLLD 149
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
RE + L+H NIV +++ T + L V EY + ER ++G R F
Sbjct: 63 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFF 120
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
QL+ G+SYCH ++ HRD+K +N L+
Sbjct: 121 QQLISGVSYCHAMQVCHRDLKLENTLL 147
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
RE + L+H NIV +++ T + L V EY + ER ++G R F
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFF 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
QL+ G+SYCH ++ HRD+K +N L+
Sbjct: 122 QQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYME----RHSGGLDHHNIR 326
+RE LLK+L H NI L++ + V E V+T + E + +D I
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGE-VYTGGELFDEIISRKRFSEVDAARI- 131
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
+ Q+L G++Y H+ +I+HRD+KP+NLL+ S+ NIR+ F L
Sbjct: 132 --IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T +Y P+VL G+ Y D+W G IL +++G P F G E YD L K+ K T
Sbjct: 191 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKYTFE 247
Query: 191 EETWEGVS 198
W+ VS
Sbjct: 248 LPQWKKVS 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMF 330
E ++LK++KH NIVTL DI + + V + V + +ER G + L +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQ 113
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLL 355
Q+L + Y H I+HRD+KP+NLL
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLL 138
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 444 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
E ++LK++KH NIVTL DI + + V + V
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 78 ENKVPYVT-RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 135
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 136 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 181
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 159 IHRDLKPENILLNE 172
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 202 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 254
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 130
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 131 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 197 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 249
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 74 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 131
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 132 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 155 IHRDLKPENILLNE 168
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 198 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 250
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y + +L +Y+ R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 130
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 131 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T Y P++L + +S D+W +GCI+ ++V GLP F
Sbjct: 197 TAQYVSPELLTEKSAXKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 74 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 131
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 132 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 155 IHRDLKPENILLNE 168
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 198 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 250
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 130
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 131 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 197 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 249
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y + +L +Y+ R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 130
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 131 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T Y P++L + +S D+W +GCI+ ++V GLP F
Sbjct: 197 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 71 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 128
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 129 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 152 IHRDLKPENILLNE 165
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 195 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y + +L +Y+ R G D
Sbjct: 76 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 133
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 134 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 179
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 157 IHRDLKPENILLNE 170
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 200 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 51 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 108
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 109 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 154
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 132 IHRDLKPENILLNE 145
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 175 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 227
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 71 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 128
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 129 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 152 IHRDLKPENILLNE 165
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 195 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 71 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 128
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 129 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 152 IHRDLKPENILLNE 165
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 195 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 247
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
I+E L++L+H N + T V EY S +E H L I
Sbjct: 102 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 161
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
L+GL+Y H ++HRDVK N+L+SE
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLSE 189
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 71 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 128
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 129 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 152 IHRDLKPENILLNE 165
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 195 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 50 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 107
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 108 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 153
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 131 IHRDLKPENILLNE 144
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 174 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 130
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 131 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 197 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 249
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 49 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 106
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 107 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 130 IHRDLKPENILLNE 143
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 173 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 225
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 48 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 105
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 106 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 151
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 129 IHRDLKPENILLNE 142
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 172 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 55 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 112
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 113 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 158
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 136 IHRDLKPENILLNE 149
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 179 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 70 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 127
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 128 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 151 IHRDLKPENILLNE 164
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 194 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 246
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDH 322
+N P+ RE ++ L H V L+ L F Y R G D
Sbjct: 73 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 154 IHRDLKPENILLNE 167
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P+ LL S S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 197 TAQYVSPE-LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 249
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLD 321
+N P+ RE ++ L H V L+ L F Y +L +Y+ R G D
Sbjct: 70 ENKVPYVT-RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFD 127
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
R + +++ L Y H + I+HRD+KP+N+L++E H I F
Sbjct: 128 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 328 FMFQ----LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
F FQ L GLSY +L K I D R + +++ L Y H + I
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 384 LHRDVKPQNLLISE 397
+HRD+KP+N+L++E
Sbjct: 151 IHRDLKPENILLNE 164
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI 185
T Y P++L + +S D+W +GCI+ ++V GLP F E Y KI K+
Sbjct: 194 TAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE-YLIFQKIIKL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
I+E L++L+H N + T V EY S +E H L I
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 122
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
L+GL+Y H ++HRDVK N+L+SE
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLSE 150
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 272 REASLLKELKHNNIVTLHDIVHT--RSTLTFVFEYVHTDLSQYM----ERHSGGLDHHNI 325
+E LL+ L+H N++ L D+++ + + V EY + + + E+ H
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG- 113
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ QL+ GL Y H + I+H+D+KP NLL++
Sbjct: 114 --YFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 134 YRPPDVLLGSTEYST-SLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILG 187
++PP++ G +S +D+W G L + TGL F G D + K+F+ +G
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-----DNIYKLFENIG 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 46 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 104
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 162
Query: 385 HR 386
++
Sbjct: 163 NK 164
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 114
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDE 138
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + K L H N+V + + EY +L +E G + +
Sbjct: 47 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 105
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 163
Query: 385 HR 386
++
Sbjct: 164 NK 165
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 115
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA ++K L H +IV L I+ T + Y + +L Y+ER+ L + L+
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ + ++Y +HRD+ +N+L++
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVA 159
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + + LKH+NIV LHD + VF+ V D+ E +S H I+
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA-REYYSEADASHCIQ 110
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + +CH+ ++HRD+KP+NLL++
Sbjct: 111 ----QILEAVLHCHQMGVVHRDLKPENLLLA 137
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH+NIV LHD + VF+ V
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLV 85
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA ++K L H +IV L I+ T + Y + +L Y+ER+ L + L+
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ + ++Y +HRD+ +N+L++
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVA 147
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 263 KNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
K G RE + L H NI+ L++ + R + + EY +L + +++ S D
Sbjct: 63 KEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK-SCTFD 121
Query: 322 HHNIRLFMFQLLRGLSYCHRRRILHRDVKPQN 353
M +L L YCH ++++HRD+KP+N
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 332 LLRGLSYCH-RRRI-LHRDVKPQNLLISEI------DHHNIRLFMFQLLRGLSYCHRRRI 383
+LR +Y + RRRI L + P+ L E+ D M +L L YCH +++
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 384 LHRDVKPQN 392
+HRD+KP+N
Sbjct: 145 IHRDIKPEN 153
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGV--REVYDQLDKI 182
TL Y PP+++ G ++ +D+W +G + E++ G P F E Y ++ K+
Sbjct: 184 TLDYLPPEMIEGRM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA ++K L H +IV L I+ T + Y + +L Y+ER+ L + L+
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ + ++Y +HRD+ +N+L++
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVA 143
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 251 VHNC-EKEGG--------NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFV 301
VH C EK G N P +T E S++ +L H ++ LHD + + +
Sbjct: 67 VHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126
Query: 302 FEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
E++ +L + + + +M Q GL + H I+H D+KP+N++
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK 186
Query: 361 HHNIRLFMFQLLRGLS 376
++++ F L L+
Sbjct: 187 ASSVKIIDFGLATKLN 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYM---ERHSGGLDHHNIRL 327
REA + + LKH NIV LHD + VF+ V +L + + E +S H I+
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ- 110
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L +++CH I+HRD+KP+NLL++
Sbjct: 111 ---QILESVNHCHLNGIVHRDLKPENLLLA 137
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH NIV LHD + VF+ V
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMF 330
E ++L+++KH NIV L DI + + L V + V + +R G + +
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSG--GELFDRIVEKGFYTEKDASTLIR 127
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q+L + Y HR I+HRD+KP+NLL D +
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEES 160
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLD-KIFK 184
Y P+VL YS ++D W +G I ++ G P F YD+ D K+F+
Sbjct: 188 YVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPF------YDENDSKLFE 232
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 444 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
E ++L+++KH NIV L DI + + L V + V
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLV 102
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + + LKH NIV LHD + VF+ V D+ E +S H I+
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA-REYYSEADASHCIQ 110
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L +++CH I+HRD+KP+NLL++
Sbjct: 111 ----QILESVNHCHLNGIVHRDLKPENLLLA 137
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH NIV LHD + VF+ V
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG-LDHHNIRLF 328
+ EA+L+K L+H+ +V L+ +V + + EY+ L +++ GG + + F
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ G++Y R+ +HRD++ N+L+SE
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSE 145
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 278 KELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMFQLLRG 335
+ L+H NIV +++ T + L V EY + ER ++G R F QL+ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISG 127
Query: 336 LSYCHRRRILHRDVKPQNLLIS 357
+SY H ++ HRD+K +N L+
Sbjct: 128 VSYAHAMQVAHRDLKLENTLLD 149
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMF 330
E ++L ++KH NIV L DI + L + + V + +R G + +F
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIF 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q+L + Y H I+HRD+KP+NLL +D +
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLD-KIFK 184
Y P+VL YS ++D W +G I ++ G P F YD+ D K+F+
Sbjct: 184 YVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPF------YDENDAKLFE 228
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMF 330
E ++L ++KH NIV L DI + L + + V + +R G + +F
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIF 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q+L + Y H I+HRD+KP+NLL +D +
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLD-KIFK 184
Y P+VL YS ++D W +G I ++ G P F YD+ D K+F+
Sbjct: 184 YVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPF------YDENDAKLFE 228
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMF 330
E ++L ++KH NIV L DI + L + + V + +R G + +F
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIF 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q+L + Y H I+HRD+KP+NLL +D +
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLD-KIFK 184
Y P+VL YS ++D W +G I ++ G P F YD+ D K+F+
Sbjct: 184 YVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPF------YDENDAKLFE 228
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMF 330
E ++L ++KH NIV L DI + L + + V + +R G + +F
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIF 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q+L + Y H I+HRD+KP+NLL +D +
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLD-KIFK 184
Y P+VL YS ++D W +G I ++ G P F YD+ D K+F+
Sbjct: 184 YVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPF------YDENDAKLFE 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + VFE++ H LS Y+ G +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 110 LDVCEGMAYLEEASVIHRDLAARNCLVGE 138
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMF 330
RE ++L +KH NIV + +L V +Y DL + + G L + L F
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 331 -QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ L + H R+ILHRD+K QN+ +++
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTK 160
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + + LKH NIV LHD + +F+ V D+ E +S H I+
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA-REYYSEADASHCIQ 128
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
Q+L + +CH+ ++HRD+KP+NLL+ S++ ++L F L
Sbjct: 129 ----QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGL 170
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH NIV LHD + +F+ V
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 103
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLS---QYMERHSGGLDHHNI 325
I+E LLK+L H N++ + + L V E DLS ++ ++ + +
Sbjct: 79 CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ QL L + H RR++HRD+KP N+ I+
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 170
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGG-LDHHNIRLF 328
+ EA+L+K L+H+ +V L+ +V + + E++ L +++ GG + + F
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ G++Y R+ +HRD++ N+L+SE
Sbjct: 115 SAQIAEGMAYIERKNYIHRDLRAANVLVSE 144
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
E LK L+H +I L+ ++ T + + V EY +L Y+ L R+ Q
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFRQ 116
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
++ ++Y H + HRD+KP+NLL E +H ++L F L
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDE--YHKLKLIDFGL 154
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG----LDHHNIR 326
+RE +++K L+H NIV V L+ V EY+ S Y H G LD
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG-SLYRLLHKSGAREQLDERRRL 140
Query: 327 LFMFQLLRGLSYCHRRR--ILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ + +G++Y H R I+HRD+K NLL+ + + +++ F L R
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDK--KYTVKVCDFGLSR 187
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHN 324
P +E + L H N+V + + EY +L +E G + +
Sbjct: 48 CPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPD 106
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRIL 384
+ F QL+ G+ Y H I HRD+KP+NLL+ E D N+++ F L Y +R R+L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164
Query: 385 HR 386
++
Sbjct: 165 NK 166
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 320 LDHHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
L+H N+ F G L YC + R ++P ++ + E D F QL+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR-IEP-DIGMPEPDAQR---FFHQLMA 116
Query: 374 GLSYCHRRRILHRDVKPQNLLISE 397
G+ Y H I HRD+KP+NLL+ E
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDE 140
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + VFE++ H LS Y+ G +
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 112
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 113 LDVCEGMAYLEEACVIHRDLAARNCLVGE 141
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + VFE++ H LS Y+ G +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 110 LDVCEGMAYLEEACVIHRDLAARNCLVGE 138
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + VFE++ H LS Y+ G +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGE 158
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + VFE++ H LS Y+ G +
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 107
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 108 LDVCEGMAYLEEACVIHRDLAARNCLVGE 136
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E ++LK L H NI+ L+D + V E Y +L + H + + + +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-IHRMKFNEVDAAVII 142
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G++Y H+ I+HRD+KP+NLL+
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLL 169
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 123 RLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGV--REVYDQLD 180
+++E G T +Y P+VL +Y D+W +G IL ++ G P F G +E+ +++
Sbjct: 194 KMKERLG-TAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE 250
Query: 181 KIFKILGTPTEETWEGVS 198
K +P W+ VS
Sbjct: 251 KGKYTFDSP---EWKNVS 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 234 SAFLQVRDAAILNPMEHVHNCEKEGGNGP------KNGAPFTAIR-EASLLKELKHNNIV 286
S F +V V+ C+++G P K +R E +L L H NI+
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 287 TLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMFQLLRGLSYCHRRRI 344
L +I T + ++ V E V + +R G + + Q+L ++Y H I
Sbjct: 112 KLKEIFETPTEISLVLELVTG--GELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 345 LHRDVKPQNLL 355
+HRD+KP+NLL
Sbjct: 170 VHRDLKPENLL 180
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 272 REASLLKELK-HNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
RE +L+++ H +I+TL D + S + VF+ + +L Y+ L R M
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-LSEKETRSIM 206
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCH 379
LL +S+ H I+HRD+KP+N+L+ D+ IRL F G S CH
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDF----GFS-CH 249
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R M LL +S+ H I+HRD+KP+N+L+ +
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 276 LLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLR 334
LLK +KH +V LH T L FV +Y++ +L +++R L+ R + ++
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARFYAAEIAS 150
Query: 335 GLSYCHRRRILHRDVKPQNLLISEIDH 361
L Y H I++RD+KP+N+L+ H
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGH 177
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQL 179
Y P+VL Y ++D W +G +L EM+ GLP F E+YD +
Sbjct: 205 YLAPEVL-HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 251 VHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEY 304
+ C +E PKN + E ++K+L H N+V+ ++ L EY
Sbjct: 44 IKQCRQE--LSPKNRERWCL--EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 305 VHT-DLSQYMER--HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
DL +Y+ + + GL IR + + L Y H RI+HRD+KP+N+++
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
IR + + L Y H RI+HRD+KP+N+++
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y P+ LL +Y+ ++D W G + E +TG F
Sbjct: 186 TLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 251 VHNCEKEGGNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLT------FVFEY 304
+ C +E PKN + E ++K+L H N+V+ ++ L EY
Sbjct: 45 IKQCRQE--LSPKNRERWCL--EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 305 VHT-DLSQYMER--HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
DL +Y+ + + GL IR + + L Y H RI+HRD+KP+N+++
Sbjct: 101 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
IR + + L Y H RI+HRD+KP+N+++
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y P+ LL +Y+ ++D W G + E +TG F
Sbjct: 187 TLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E + +LKH +I+ L++ + + V E H ++++Y++ + R FM Q
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRR 381
++ G+ Y H ILHRD+ NLL++ + NI++ F L L H +
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQLKMPHEK 168
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 336 LSYCHR---RRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQN 392
L CH R L VKP + R FM Q++ G+ Y H ILHRD+ N
Sbjct: 90 LEMCHNGEMNRYLKNRVKP-------FSENEARHFMHQIITGMLYLHSHGILHRDLTLSN 142
Query: 393 LLIS 396
LL++
Sbjct: 143 LLLT 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG----LDHHNIR 326
+RE +++K L+H NIV V L+ V EY+ S Y H G LD
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG-SLYRLLHKSGAREQLDERRRL 140
Query: 327 LFMFQLLRGLSYCHRRR--ILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ + +G++Y H R I+HR++K NLL+ + + +++ F L R
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK--KYTVKVCDFGLSR 187
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + + LKH NIV LHD + +F+ V D+ E +S H I+
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA-REYYSEADASHCIQ 117
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLI-SEIDHHNIRLFMFQL 371
Q+L + +CH+ ++HR++KP+NLL+ S++ ++L F L
Sbjct: 118 ----QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL 159
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH NIV LHD + +F+ V
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 92
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 269 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRL 327
T +E + L+H +V LHD + + ++E++ +L + + +
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
+M Q+ +GL + H +H D+KP+N++ + + ++L F L
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL 303
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 51 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 157
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 59 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 118 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 165
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT--DLSQYMERHSGGLDHHNIRLFMF 330
E ++L ++H NI+ + DI + V E + DL +++RH LD
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFR 137
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILH 385
QL+ + Y + I+HRD+K +N++I+E I+L F +Y R ++ +
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAE--DFTIKLIDFG---SAAYLERGKLFY 187
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-G 319
P +P + + EA ++K+LKH+ +V L+ +V + + V EY++ L +++ G
Sbjct: 43 PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRA 101
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
L N+ Q+ G++Y R +HRD++ N+L+
Sbjct: 102 LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG 139
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 133 WYRPPDVLLGSTEYSTSLDMWGVGCILIEMVT-GLPTFPGV--REVYDQLDKIFKI 185
W P L G ++ D+W G +L E+VT G +PG+ REV +Q+++ +++
Sbjct: 172 WTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSG 318
GPK F + EA ++ + H ++V L + + T+ V + + H L +Y+ H
Sbjct: 79 TGPKANVEF--MDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKD 135
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF-MFQLLRG 374
+ + + Q+ +G+ Y RR++HRD+ +N+L+ +H I F + +LL G
Sbjct: 136 NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 332 LLRGLSYCHRRRI-LHRDVKPQNLLISEIDHHNIRL-------FMFQLLRGLSYCHRRRI 383
L+R L C I L + P L+ + H + + Q+ +G+ Y RR+
Sbjct: 102 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 161
Query: 384 LHRDVKPQNLLIS 396
+HRD+ +N+L+
Sbjct: 162 VHRDLAARNVLVK 174
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 57 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 163
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 51 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 157
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDL-SQYMERHSGGLDHHNIRLFMF 330
E ++LK+L H NI+ L++ + V E Y +L + + R + + M
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMK 128
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
Q+L G +Y H+ I+HRD+KP+NLL+
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLL 154
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 123 RLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
+++E G T +Y P+VL +Y D+W G IL ++ G P F G
Sbjct: 179 KMKERLG-TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 60 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 118
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 119 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 166
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 56 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 114
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 61 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 119
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 167
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
H +V LH T S L FV EYV+ DL +M+R L + R + ++ L+Y H
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH 170
Query: 341 RRRILHRDVKPQNLLISEIDH 361
R I++RD+K N+L+ H
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGH 191
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P++L G +Y S+D W +G ++ EM+ G F
Sbjct: 219 YIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 57 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 163
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 53 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 111
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 112 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 159
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
H +V LH T S L FV EYV+ DL +M+R L + R + ++ L+Y H
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH 138
Query: 341 RRRILHRDVKPQNLLISEIDH 361
R I++RD+K N+L+ H
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGH 159
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P++L G +Y S+D W +G ++ EM+ G F
Sbjct: 187 YIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 51 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 157
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 52 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 110
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 111 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 158
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 51 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 157
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-----HTDLSQYMERHSGGLDHHNIR 326
REA + + LKH NIV LHD + VF+ V D+ E +S H I
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA-REYYSEADASHCIH 137
Query: 327 LFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L +++ H+ I+HRD+KP+NLL++
Sbjct: 138 ----QILESVNHIHQHDIVHRDLKPENLLLA 164
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA + + LKH NIV LHD + VF+ V
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 112
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 260 NGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSG 318
GPK F + EA ++ + H ++V L + + T+ V + + H L +Y+ H
Sbjct: 56 TGPKANVEF--MDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKD 112
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF-MFQLLRG 374
+ + + Q+ +G+ Y RR++HRD+ +N+L+ +H I F + +LL G
Sbjct: 113 NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 332 LLRGLSYCHRRRI-LHRDVKPQNLLISEIDHHNIRL-------FMFQLLRGLSYCHRRRI 383
L+R L C I L + P L+ + H + + Q+ +G+ Y RR+
Sbjct: 79 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 138
Query: 384 LHRDVKPQNLLIS 396
+HRD+ +N+L+
Sbjct: 139 VHRDLAARNVLVK 151
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
H +V LH T S L FV EYV+ DL +M+R L + R + ++ L+Y H
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH 127
Query: 341 RRRILHRDVKPQNLLISEIDH 361
R I++RD+K N+L+ H
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGH 148
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P++L G +Y S+D W +G ++ EM+ G F
Sbjct: 176 YIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCH 340
H +V LH T S L FV EYV+ DL +M+R L + R + ++ L+Y H
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH 123
Query: 341 RRRILHRDVKPQNLLISEIDH 361
R I++RD+K N+L+ H
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGH 144
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P++L G +Y S+D W +G ++ EM+ G F
Sbjct: 172 YIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRR 342
++ LH++ S + + EY S + + + +++ + Q+L G+ Y H+
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 343 RILHRDVKPQNLLISEI-DHHNIRLFMFQLLRGLSY-CHRRRIL 384
I+H D+KPQN+L+S I +I++ F + R + + C R I+
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM 194
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEI 398
++SE D IRL Q+L G+ Y H+ I+H D+KPQN+L+S I
Sbjct: 127 MVSENDV--IRLIK-QILEGVYYLHQNNIVHLDLKPQNILLSSI 167
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFE-YVHTDL-SQYMERHSGGLDHHNIRLF 328
+ E ++LK+L H NI+ L++ + V E Y +L + + R + +
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVI 109
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLI 356
M Q+L G +Y H+ I+HRD+KP+NLL+
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLL 137
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T +Y P+VL +Y D+W G IL ++ G P F G
Sbjct: 169 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 269 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRL 327
T +E + L+H +V LHD + + ++E++ +L + + +
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 153
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
+M Q+ +GL + H +H D+KP+N++ + + ++L F L
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL 197
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 46 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 104
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HRD++ N+L+S D + ++ F L R
Sbjct: 105 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLAR 152
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 259 GNGPKNGAPFTAIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYVHT-DLS 310
G G + +REA+L KE+ H NI+ L D T + VF+ + +L
Sbjct: 41 GGGSFSAEEVQELREATL-KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 99
Query: 311 QYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Y+ L R M LL + H+ I+HRD+KP+N+L+ D NI+L F
Sbjct: 100 DYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLTDF 155
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R M LL + H+ I+HRD+KP+N+L+ +
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDD 146
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTR--STLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLF 328
+E +L+ L H +I+ ++L V EYV L Y+ RHS GL + LF
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA--QLLLF 139
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G++Y H + +HRD+ +N+L+
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLD 168
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 260 NGPKNGAPFTAIR-EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--- 315
N ++ P I E +LK L H NI+ + ++ + V E + +ER
Sbjct: 56 NKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG--GELLERIVS 113
Query: 316 ---HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN-IRLFMFQL 371
L + M Q++ L+Y H + ++H+D+KP+N+L + H+ I++ F L
Sbjct: 114 AQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
IV + HT L+F+ + ++ DL ++ +H G ++R + +++ GL + H R
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 344 ILHRDVKPQNLLISEIDHHNI 364
+++RD+KP N+L+ E H I
Sbjct: 313 VVYRDLKPANILLDEHGHVRI 333
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 352 QNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
Q+ + SE D +R + +++ GL + H R +++RD+KP N+L+ E
Sbjct: 285 QHGVFSEAD---MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+VL Y +S D + +GC+L +++ G F
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
IV + HT L+F+ + ++ DL ++ +H G ++R + +++ GL + H R
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 344 ILHRDVKPQNLLISEIDHHNI 364
+++RD+KP N+L+ E H I
Sbjct: 313 VVYRDLKPANILLDEHGHVRI 333
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 352 QNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
Q+ + SE D +R + +++ GL + H R +++RD+KP N+L+ E
Sbjct: 285 QHGVFSEAD---MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+VL Y +S D + +GC+L +++ G F
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
IV + HT L+F+ + ++ DL ++ +H G ++R + +++ GL + H R
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF 311
Query: 344 ILHRDVKPQNLLISEIDHHNI 364
+++RD+KP N+L+ E H I
Sbjct: 312 VVYRDLKPANILLDEHGHVRI 332
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 352 QNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
Q+ + SE D +R + +++ GL + H R +++RD+KP N+L+ E
Sbjct: 284 QHGVFSEAD---MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 326
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+VL Y +S D + +GC+L +++ G F
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
IV + HT L+F+ + ++ DL ++ +H G ++R + +++ GL + H R
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 344 ILHRDVKPQNLLISEIDHHNI 364
+++RD+KP N+L+ E H I
Sbjct: 313 VVYRDLKPANILLDEHGHVRI 333
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 352 QNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
Q+ + SE D +R + +++ GL + H R +++RD+KP N+L+ E
Sbjct: 285 QHGVFSEAD---MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 327
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+VL Y +S D + +GC+L +++ G F
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSG--GLDHHNIRL 327
A+ E +L+++ +V+L T+ L V ++ ++ H G G
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ ++ GL HR RI++RD+KP+N+L+ DH +IR+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLD--DHGHIRI 327
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T+ Y P+V+ + Y+ S D W +GC+L EM+ G F
Sbjct: 348 TVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ ++ GL HR RI++RD+KP+N+L+ +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDD 321
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSG--GLDHHNIRL 327
A+ E +L+++ +V+L T+ L V ++ ++ H G G
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ ++ GL HR RI++RD+KP+N+L+ DH +IR+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLD--DHGHIRI 327
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T+ Y P+V+ + Y+ S D W +GC+L EM+ G F
Sbjct: 348 TVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ ++ GL HR RI++RD+KP+N+L+ +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDD 321
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
+E ++K L H NI+ L++ + + V E + ER H + M
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG--GELFERVVHKRVFRESDAARIM 112
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLL 355
+L ++YCH+ + HRD+KP+N L
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFL 138
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 259 GNGPKNGAPFTAIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYVHT-DLS 310
G G + +REA+L KE+ H NI+ L D T + VF+ + +L
Sbjct: 54 GGGSFSAEEVQELREATL-KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112
Query: 311 QYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Y+ L R M LL + H+ I+HRD+KP+N+L+ D NI+L F
Sbjct: 113 DYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLTDF 168
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R M LL + H+ I+HRD+KP+N+L+ +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD 159
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I EA ++ +L H +V L+ + ++ + V E++ H LS Y+ G +
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC 110
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ G++Y ++HRD+ +N L+ E
Sbjct: 111 LDVCEGMAYLEEACVIHRDLAARNCLVGE 139
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 259 GNGPKNGAPFTAIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYVHT-DLS 310
G G + +REA+L KE+ H NI+ L D T + VF+ + +L
Sbjct: 54 GGGSFSAEEVQELREATL-KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112
Query: 311 QYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Y+ L R M LL + H+ I+HRD+KP+N+L+ D NI+L F
Sbjct: 113 DYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLTDF 168
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R M LL + H+ I+HRD+KP+N+L+ +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD 159
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFM 329
+E ++K L H NI+ L++ + + V E + ER H + M
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG--GELFERVVHKRVFRESDAARIM 129
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+L ++YCH+ + HRD+KP+N L
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLF 156
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + V EY+ + +L Y+ + + L+M
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHVVKVADFGLSR 178
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMF 330
+E S+L +H NI+ LH+ + L +FE++ D+ + + + L+ I ++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ L + H I H D++P+N++ I++ F R L
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 220 FPRLYDIPEGESMASAFLQVRDAAILNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKE 279
F L I +G +Q D + M++++ + N +N +E +++
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN-----VFKELQIMQG 71
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYC 339
L+H +V L + V + + +Y + + ++LF+ +L+ L Y
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 340 HRRRILHRDVKPQNLLISEIDHHNIRLF 367
+RI+HRD+KP N+L+ E H +I F
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDF 159
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
++LF+ +L+ L Y +RI+HRD+KP N+L+ E
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDE 150
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
+QL L+Y +R +HRD+ +N+L+S D
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATD 148
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 145
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 42 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKY 100
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 139
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 318 GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
G LD I + ++L+GL Y H + +HRD+K N+L+SE H ++L F + L+
Sbjct: 119 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTD 176
Query: 378 CHRRR 382
+R
Sbjct: 177 TQIKR 181
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L+GL Y H + +HRD+K N+L+SE
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 159
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+ KL+++G+GS+ VFKG N T +VVA+K I L
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 62
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQY----MERHSGGLDHHNI 325
A+ E +L ++ IV+L T++ L V ++ +Y ++ + G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ Q++ GL + H+R I++RD+KP+N+L+ D N+R+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGNVRI 330
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ Q++ GL + H+R I++RD+KP+N+L+ +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD 324
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQY----MERHSGGLDHHNI 325
A+ E +L ++ IV+L T++ L V ++ +Y ++ + G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ Q++ GL + H+R I++RD+KP+N+L+ D N+R+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGNVRI 330
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ Q++ GL + H+R I++RD+KP+N+L+ +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD 324
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQY----MERHSGGLDHHNI 325
A+ E +L ++ IV+L T++ L V ++ +Y ++ + G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ Q++ GL + H+R I++RD+KP+N+L+ D N+R+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGNVRI 330
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ Q++ GL + H+R I++RD+KP+N+L+ +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD 324
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P N +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 219 PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 277
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 316
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQY----MERHSGGLDHHNI 325
A+ E +L ++ IV+L T++ L V ++ +Y ++ + G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
+ Q++ GL + H+R I++RD+KP+N+L+ D N+R+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGNVRI 330
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 366 LFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ Q++ GL + H+R I++RD+KP+N+L+ +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD 324
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 160
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 318 GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
G LD I + ++L+GL Y H + +HRD+K N+L+SE H ++L F + L+
Sbjct: 114 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTD 171
Query: 378 CHRRR 382
+R
Sbjct: 172 TQIKR 176
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L+GL Y H + +HRD+K N+L+SE
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 87 KADA---YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
KAD + KL+++G+GS+ VFKG N T +VVA+K I L
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 57
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATD--CVKLGDFGLSR 539
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 525
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY++ L +++ +G
Sbjct: 49 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKY 107
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGE 146
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT----DLSQYM----ERHSGGLDH 322
++E + + H NIV+ + + L V + + D+ +++ E SG LD
Sbjct: 56 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
I + ++L GL Y H+ +HRDVK N+L+ E
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 151
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L GL Y H+ +HRDVK N+L+ E
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 151
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGL--DHHNIRLF 328
E +L K LKH NIV + E V LS + G L + I +
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L GL Y H +I+HRD+K N+LI+
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLIN 142
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVL-LGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y P+++ G Y + D+W +GC +IEM TG P F
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 360 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ I + Q+L GL Y H +I+HRD+K N+LI+
Sbjct: 106 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 142
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 97 LGEGSYATVFKGYSNLTNQV-VALKEI---------RLQEEEGITLWYRPPDVLLGSTEY 146
LG+G+Y V+ G +L+NQV +A+KEI L EE + + +++ +Y
Sbjct: 16 LGKGTYGIVYAG-RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV----QY 70
Query: 147 STSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN-V 205
S G I +E V G +R + L + +G T++ EG+ L V
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 206 HRD 208
HRD
Sbjct: 131 HRD 133
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY++ L +++ +G
Sbjct: 49 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKY 107
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGE 146
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R ++
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMT 167
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNE 176
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 120 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174
Query: 396 SE 397
+E
Sbjct: 175 NE 176
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 207 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 318 GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
G LD I + ++L+GL Y H + +HRD+K N+L+SE H ++L F + L+
Sbjct: 99 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTD 156
Query: 378 CHRRR 382
+R
Sbjct: 157 TQIKR 161
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L+GL Y H + +HRD+K N+L+SE
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+ KL+++G+GS+ VFKG N T +VVA+K I L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 42
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNE 156
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 100 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 154
Query: 396 SE 397
+E
Sbjct: 155 NE 156
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 187 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 235
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 266 APFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSG-GLDHH 323
+P + EA+L+K+L+H +V L+ +V T+ + + EY+ L +++ SG L +
Sbjct: 47 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 105
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ Q+ G+++ R +HR+++ N+L+S D + ++ F L R
Sbjct: 106 KLLDMAAQIAEGMAFIEERNYIHRNLRAANILVS--DTLSCKIADFGLAR 153
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT----DLSQYM----ERHSGGLDH 322
++E + + H NIV+ + + L V + + D+ +++ E SG LD
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
I + ++L GL Y H+ +HRDVK N+L+ E
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 156
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L GL Y H+ +HRDVK N+L+ E
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 156
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 318 GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
G LD I + ++L+GL Y H + +HRD+K N+L+SE H ++L F + L+
Sbjct: 99 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTD 156
Query: 378 CHRRR 382
+R
Sbjct: 157 TQIKR 161
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+D I + ++L+GL Y H + +HRD+K N+L+SE
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+ KL+++G+GS+ VFKG N T +VVA+K I L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 42
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGL--DHHNIRLF 328
E +L K LKH NIV + E V LS + G L + I +
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L GL Y H +I+HRD+K N+LI+
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLIN 156
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVL-LGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
TL Y P+++ G Y + D+W +GC +IEM TG P F
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 360 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ I + Q+L GL Y H +I+HRD+K N+LI+
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 156
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 97 LGEGSYATVFKGYSNLTNQV-VALKEI---------RLQEEEGITLWYRPPDVLLGSTEY 146
LG+G+Y V+ G +L+NQV +A+KEI L EE + + +++ +Y
Sbjct: 30 LGKGTYGIVYAG-RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV----QY 84
Query: 147 STSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYN-V 205
S G I +E V G +R + L + +G T++ EG+ L V
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 206 HRD 208
HRD
Sbjct: 145 HRD 147
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNE 174
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 118 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 172
Query: 396 SE 397
+E
Sbjct: 173 NE 174
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 205 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 253
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 171
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 155
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
++EA +++ H +IV L ++ + +L +++ LD ++ L+ +
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 162
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 148
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 165
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 149
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 171
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 155
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
++EA +++ H +IV L ++ + +L +++ LD ++ L+ +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 164
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 150
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
++EA +++ H +IV L ++ + +L +++ LD ++ L+ +
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 187
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 173
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNE 152
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 96 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 396 SE 397
+E
Sbjct: 151 NE 152
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 183 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNE 152
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 96 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 396 SE 397
+E
Sbjct: 151 NE 152
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 183 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 231
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 45 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKY 103
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 104 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 142
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFE--YVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYC 339
H ++ L D T+ V E DL Y+ G L R F Q++ + +C
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 340 HRRRILHRDVKPQNLLI 356
H R ++HRD+K +N+LI
Sbjct: 156 HSRGVVHRDIKDENILI 172
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 344 ILHRDVKPQNLL--ISE---IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+L R + Q+L I+E + R F Q++ + +CH R ++HRD+K +N+LI
Sbjct: 116 VLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
++EA +++ H +IV L ++ + +L +++ LD ++ L+ +
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 161
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 110 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 147
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 156
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 142
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 160
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E S+ + L H ++V H + V E + + L R ++ Q+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISE 358
+ G Y HR R++HRD+K NL ++E
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNE 150
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + L E R ++ Q++ G Y HR R++HRD+K NL +
Sbjct: 94 LELCRRRSLLELHKRRKALTEPEA-----RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148
Query: 396 SE 397
+E
Sbjct: 149 NE 150
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCI+ ++ G P F ++E Y ++ K
Sbjct: 181 YIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 157
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 164
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
+QL L+Y +R +HRD+ +N+L+S D
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSND 148
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 145
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEID 360
+QL L+Y +R +HRD+ +N+L+S D
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSND 148
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 145
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 159
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQ 331
+E ++L + + + + S L + EY+ + + R +G D I + +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-AGPFDEFQIATMLKE 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
+L+GL Y H + +HRD+K N+L+SE +++L F + L+ +R
Sbjct: 129 ILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR 177
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+ KL+++G+GS+ VFKG N T QVVA+K I L
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL 58
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 360 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
D I + ++L+GL Y H + +HRD+K N+L+SE
Sbjct: 118 DEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE 155
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
E +L H NIV L D + + L + E+ + M L I++ Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRD 387
L L+Y H +I+HRD+K N+L + +D +I+L F G+S + R I RD
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFT-LD-GDIKLADF----GVSAKNTRXIQRRD 193
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
E +L H NIV L D + + L + E+ + M L I++ Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRD 387
L L+Y H +I+HRD+K N+L + +D +I+L F G+S + R I RD
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFT-LD-GDIKLADF----GVSAKNTRXIQRRD 193
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
E +L H NIV L D + + L + E+ + M L I++ Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRD 387
L L+Y H +I+HRD+K N+L + +D +I+L F G+S + R I RD
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFT-LD-GDIKLADF----GVSAKNTRTIQRRD 193
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
++EA +++ H +IV L ++ + +L +++ LD ++ L+ +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEID 360
QL L+Y +R +HRD+ +N+L+S D
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSND 148
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 145
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 161
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 145
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 164
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 301 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKY 359
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 398
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 161
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 145
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 165
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 149
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRS--TLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLF 328
+E +L+ L H +I+ + +L V EYV L Y+ RHS GL + LF
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA--QLLLF 122
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G++Y H + +HR++ +N+L+
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLD 151
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 161
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN---IRLFMFQLLRGL 336
L+ N V V +STL EY + Y HS L+ RLF Q+L L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENG-TLYDLIHSENLNQQRDEYWRLFR-QILEAL 129
Query: 337 SYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
SY H + I+HRD+KP N+ I E N+++ F L + +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNV 166
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
RLF Q+L LSY H + I+HRD+KP N+ I E
Sbjct: 120 RLFR-QILEALSYIHSQGIIHRDLKPMNIFIDE 151
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
++EA +++ H +IV L ++ T + + + E +L +++ LD ++ L+
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+QL L+Y +R +HRD+ +N+L+S D ++L F L R
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSR 539
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+D ++ L+ +QL L+Y +R +HRD+ +N+L+S
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 525
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
IRE + + L H N++ L+ +V T + V E L + +H G + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +R +HRD+ +NLL++ D +++ F L+R L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL 161
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ Q+ G+ Y +R +HRD+ +NLL++
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLA 145
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRS--TLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLF 328
+E +L+ L H +I+ + +L V EYV L Y+ RHS GL + LF
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA--QLLLF 122
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G++Y H + +HR++ +N+L+
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLD 151
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 163
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R ++
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMT 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN---IRLFMFQLLRGL 336
L+ N V V +STL EY + + Y HS L+ RLF Q+L L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCE-NRTLYDLIHSENLNQQRDEYWRLFR-QILEAL 129
Query: 337 SYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
SY H + I+HRD+KP N+ I E N+++ F L + +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNV 166
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ YC R L+ + +NL ++ RLF Q+L LSY H + I+HRD+KP N+ I
Sbjct: 94 MEYCENR-TLYDLIHSENL--NQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 396 SE 397
E
Sbjct: 150 DE 151
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R ++
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMT 162
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R ++
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMT 162
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 164
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 161
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ +G
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKY 276
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 172
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH-------SGGLDHH 323
REA LL L+H +IV + L VFEY+ H DL++++ H +GG D
Sbjct: 92 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151
Query: 324 NIRLFMFQLL-------RGLSYCHRRRILHRDVKPQNLLISE 358
L + QLL G+ Y +HRD+ +N L+ +
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGG----------- 319
REA LL L+H +IV + + L VFEY+ H DL++++ H
Sbjct: 64 REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT 123
Query: 320 -LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G+ Y + +HRD+ +N L+ E
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA LL L+H +IV + + L VFEY+
Sbjct: 64 REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS------------- 317
REA LL L+H +IV + + L VFEY+ H DL++++ H
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 318 --GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
G L + Q+ G+ Y + +HRD+ +N L+
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 167
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 443 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
REA LL L+H +IV + + L VFEY+
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 99
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 43 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 101
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 102 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 140
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 41 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 99
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 100 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 138
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 157
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 159
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 159
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDH-HNIRLF 328
+ EA+++K L+H+ +V LH +V T+ + + E++ L +++ G + F
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 116
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G+++ +R +HRD++ N+L+S
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVS 145
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HRD+ +N L+ E +H +++ F L R
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSR 157
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%)
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYC 339
L IV L+ V + E + + + G L ++ Q L GL Y
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYL 201
Query: 340 HRRRILHRDVKPQNLLISEIDHH 362
H RRILH DVK N+L+S H
Sbjct: 202 HSRRILHGDVKADNVLLSSDGSH 224
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++ Q L GL Y H RRILH DVK N+L+S
Sbjct: 190 YLGQALEGLEYLHSRRILHGDVKADNVLLS 219
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 259 GNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRS--TLTFVFEYVH-TDLSQYMER 315
G GP+ + + RE +L+ L H +IV + ++ V EYV L Y+ R
Sbjct: 48 GCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR 105
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
H GL + LF Q+ G++Y H + +HR + +N+L+
Sbjct: 106 HCVGLA--QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD 145
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%)
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYC 339
L IV L+ V + E + + + G L ++ Q L GL Y
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYL 182
Query: 340 HRRRILHRDVKPQNLLISEIDHH 362
H RRILH DVK N+L+S H
Sbjct: 183 HSRRILHGDVKADNVLLSSDGSH 205
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++ Q L GL Y H RRILH DVK N+L+S
Sbjct: 171 YLGQALEGLEYLHSRRILHGDVKADNVLLS 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 259 GNGPKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRS--TLTFVFEYVH-TDLSQYMER 315
G GP+ + + RE +L+ L H +IV + ++ V EYV L Y+ R
Sbjct: 49 GCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR 106
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
H GL + LF Q+ G++Y H + +HR + +N+L+
Sbjct: 107 HCVGLA--QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD 146
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH-------SGGLDHH 323
REA LL L+H +IV + L VFEY+ H DL++++ H +GG D
Sbjct: 63 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122
Query: 324 NIRLFMFQLL-------RGLSYCHRRRILHRDVKPQNLLISE 358
L + QLL G+ Y +HRD+ +N L+ +
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 164
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH-------SGGLDHH 323
REA LL L+H +IV + L VFEY+ H DL++++ H +GG D
Sbjct: 69 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128
Query: 324 NIRLFMFQLL-------RGLSYCHRRRILHRDVKPQNLLISE 358
L + QLL G+ Y +HRD+ +N L+ +
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 170
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E +L ++ H +V LH T L + +++ DL + + +++ ++ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAE 138
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
L GL + H I++RD+KP+N+L+ E H I+L F L
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGL 176
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+++ ++ +L GL + H I++RD+KP+N+L+ E
Sbjct: 131 DVKFYLAELALGLDHLHSLGIIYRDLKPENILLDE 165
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P+V+ +S S D W G ++ EM+TG F G ++ + + I K LG P
Sbjct: 193 TVEYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQG-KDRKETMTLILKAKLGMP 250
Query: 190 TEETWEGVSLL 200
+ E SLL
Sbjct: 251 QFLSTEAQSLL 261
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDH-HNIRLF 328
+ EA+++K L+H+ +V LH +V T+ + + E++ L +++ G + F
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G+++ +R +HRD++ N+L+S
Sbjct: 290 SAQIAEGMAFIEQRNYIHRDLRAANILVS 318
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDH-HNIRLF 328
+ EA+++K L+H+ +V LH +V T+ + + E++ L +++ G + F
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 283
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+ G+++ +R +HRD++ N+L+S
Sbjct: 284 SAQIAEGMAFIEQRNYIHRDLRAANILVS 312
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+L+H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD+ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGE 149
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E ++L+E+KH IV L T L + EY+ +L +ER G ++ +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAE 129
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ L + H++ I++RD+KP+N++++ H ++L F L +
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCK 169
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P++L+ S ++ ++D W +G ++ +M+TG P F G +DKI K L P
Sbjct: 184 TIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILKCKLNLP 241
Query: 190 TEETWEGVSLL 200
T E LL
Sbjct: 242 PYLTQEARDLL 252
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 262 PKNGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGG- 319
P +P ++EA ++K+++H +V L+ +V + + V EY+ L +++ G
Sbjct: 52 PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKY 110
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + Q+ G++Y R +HRD++ N+L+ E
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E ++L+E+KH IV L T L + EY+ +L +ER G ++ +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAE 129
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ L + H++ I++RD+KP+N++++ H ++L F L +
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCK 169
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P++L+ S ++ ++D W +G ++ +M+TG P F G +DKI K L P
Sbjct: 184 TIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILKCKLNLP 241
Query: 190 TEETWEGVSLL 200
T E LL
Sbjct: 242 PYLTQEARDLL 252
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 262 PKNGAPFTA--IREASLLKELKHNNIVTLHDIV--HTRSTLTFVFEYVHT-DLSQYMERH 316
P++G A +E +L+ L H NIV I + + + E++ + L +Y+ ++
Sbjct: 60 PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
++ + Q+ +G+ Y R+ +HRD+ +N+L+ H +++ F L + +
Sbjct: 120 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE--SEHQVKIGDFGLTKAI 176
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 309 LSQYMERHSGGLDHHNIRLFMF-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
L Q++E+ G + L +F Q+ +G+ Y H ++++HRD+KP N+ + +D +++
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL--VDTKQVKIG 178
Query: 368 MFQLLRGLSYCHRR 381
F L+ L +R
Sbjct: 179 DFGLVTSLKNDGKR 192
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 370 QLLRGLSYCHRRRILHRDVKPQNLLI 395
Q+ +G+ Y H ++++HRD+KP N+ +
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFL 169
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 263 KNGAPFTA-IREASLLKELKHNNIVTLHD-IVHTRSTLTFVFEYV-HTDLSQYM-ERHSG 318
KN A A + EAS++ +L+H+N+V L IV + L V EY+ L Y+ R
Sbjct: 44 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 103
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + F + + Y +HRD+ +N+L+SE
Sbjct: 104 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 143
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 280 LKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN---IRLFMFQLLRGL 336
L+ N V V +STL EY + + Y HS L+ RLF Q+L L
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCE-NRTLYDLIHSENLNQQRDEYWRLFR-QILEAL 129
Query: 337 SYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
SY H + I+HR++KP N+ I E N+++ F L + +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDE--SRNVKIGDFGLAKNV 166
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
RLF Q+L LSY H + I+HR++KP N+ I E
Sbjct: 120 RLFR-QILEALSYIHSQGIIHRNLKPXNIFIDE 151
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 262 PKNGAPFTA--IREASLLKELKHNNIVTLHDIV--HTRSTLTFVFEYVHT-DLSQYMERH 316
P++G A +E +L+ L H NIV I + + + E++ + L +Y+ ++
Sbjct: 48 PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 107
Query: 317 SGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
++ + Q+ +G+ Y R+ +HRD+ +N+L+ H +++ F L + +
Sbjct: 108 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE--SEHQVKIGDFGLTKAI 164
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 320
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HR++ +N L+ E +H +++ F L R
Sbjct: 321 ATQISSAMEYLEKKNFIHRNLAARNCLVGE--NHLVKVADFGLSR 363
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 173
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVN 201
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVN 201
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T Y P+ L G T YS D+W +G L+EM G
Sbjct: 228 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 263 KNGAPFTA-IREASLLKELKHNNIVTLHD-IVHTRSTLTFVFEYV-HTDLSQYM-ERHSG 318
KN A A + EAS++ +L+H+N+V L IV + L V EY+ L Y+ R
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + F + + Y +HRD+ +N+L+SE
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 152
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E L IV L+ V + E + + + G L ++
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 157
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q L GL Y H RRILH DVK N+L+S
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLS 184
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++ Q L GL Y H RRILH DVK N+L+S
Sbjct: 155 YLGQALEGLEYLHTRRILHGDVKADNVLLS 184
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E +L E+ H IV LH T L + +++ DL + + +++ ++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAE 134
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
L L + H I++RD+KP+N+L+ E H I+L F L
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGL 172
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+++ ++ +L L + H I++RD+KP+N+L+ E
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 161
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P+V+ ++ S D W G ++ EM+TG F G ++ + + I K LG P
Sbjct: 189 TVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLGMP 246
Query: 190 TEETWEGVSLL 200
+ E SLL
Sbjct: 247 QFLSPEAQSLL 257
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
Query: 269 TAIREASLLKELKHNN--------IVTLHD---IVHTRST-LTFVFEYV-HTDLSQYMER 315
TA+ E LLK +++++ +V L D I T + VFE + H L ++
Sbjct: 63 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 122
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLISEIDHHNIRL 366
+ GL ++ + Q+L+GL Y H + RI+H D+KP+N+L+S + + RL
Sbjct: 123 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 174
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 364 IRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLIS 396
++ + Q+L+GL Y H + RI+H D+KP+N+L+S
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS 165
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF-PGVREVY----DQLDKIFKILG 187
YR +VL+GS Y+T D+W C+ E+ TG F P E Y D + I ++LG
Sbjct: 243 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 300
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
Query: 269 TAIREASLLKELKHNN--------IVTLHD---IVHTRST-LTFVFEYV-HTDLSQYMER 315
TA+ E LLK +++++ +V L D I T + VFE + H L ++
Sbjct: 79 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 138
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLISEIDHHNIRL 366
+ GL ++ + Q+L+GL Y H + RI+H D+KP+N+L+S + + RL
Sbjct: 139 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 364 IRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLIS 396
++ + Q+L+GL Y H + RI+H D+KP+N+L+S
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS 181
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF-PGVREVY----DQLDKIFKILG 187
YR +VL+GS Y+T D+W C+ E+ TG F P E Y D + I ++LG
Sbjct: 259 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++D + V EYV + + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N+LIS + +++ F + R ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATN--AVKVVDFGIARAIA 167
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N+LIS
Sbjct: 127 QALNFSHQNGIIHRDVKPANILIS 150
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 182 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E L IV L+ V + E + + + G L ++
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 171
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q L GL Y H RRILH DVK N+L+S
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLS 198
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++ Q L GL Y H RRILH DVK N+L+S
Sbjct: 169 YLGQALEGLEYLHTRRILHGDVKADNVLLS 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 263 KNGAPFTA-IREASLLKELKHNNIVTLHD-IVHTRSTLTFVFEYV-HTDLSQYM-ERHSG 318
KN A A + EAS++ +L+H+N+V L IV + L V EY+ L Y+ R
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + F + + Y +HRD+ +N+L+SE
Sbjct: 285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 324
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 120
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLS 147
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ +L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 147
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 192 ETWEGVS 198
E W VS
Sbjct: 241 EVWAEVS 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I+E S++++ ++V + + L V EY +S + + L I +
Sbjct: 72 IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
L+GL Y H R +HRD+K N+L++ H + F
Sbjct: 132 QSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF 169
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 94 LDQLGEGSYATVFKGYSNLTNQVVALKEI----RLQE---EEGITLWYRPPDVLLGSTEY 146
L++LGEGSY +V+K T Q+VA+K++ LQE E I P V+ Y
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 147 STSLDMWGV 155
+ D+W V
Sbjct: 94 FKNTDLWIV 102
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 372 LRGLSYCHRRRILHRDVKPQNLLIS 396
L+GL Y H R +HRD+K N+L++
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLN 159
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ +L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 192 ETWEGVS 198
E W VS
Sbjct: 242 EVWAEVS 248
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 263 KNGAPFTA-IREASLLKELKHNNIVTLHD-IVHTRSTLTFVFEYV-HTDLSQYM-ERHSG 318
KN A A + EAS++ +L+H+N+V L IV + L V EY+ L Y+ R
Sbjct: 38 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 97
Query: 319 GLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
L + F + + Y +HRD+ +N+L+SE
Sbjct: 98 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 137
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E L IV L+ V + E + + + G L ++
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 173
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q L GL Y H RRILH DVK N+L+S
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLS 200
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++ Q L GL Y H RRILH DVK N+L+S
Sbjct: 171 YLGQALEGLEYLHTRRILHGDVKADNVLLS 200
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 127
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLS 154
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ +L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 154
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 192 ETWEGVS 198
E W VS
Sbjct: 248 EVWAEVS 254
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + + L+M
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HR++ +N L+ E +H +++ F L R
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGE--NHLVKVADFGLSR 405
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ +L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 192 ETWEGVS 198
E W VS
Sbjct: 242 EVWAEVS 248
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 121
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ +L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 192 ETWEGVS 198
E W VS
Sbjct: 242 EVWAEVS 248
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
++EA+++KE+KH N+V L + + E++ + +L Y+ + + L+M
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 330 F-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
Q+ + Y ++ +HR++ +N L+ E +H +++ F L R
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGE--NHLVKVADFGLSR 366
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E + DL ++ G L R F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER-GALQEELARSF 119
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 159
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 148
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 246
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLS 273
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 241 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 192 ETWEGVS 198
E W VS
Sbjct: 367 EVWAEVS 373
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG--LDHHNIRLFMF 330
E +LK+L H I+ + + V E + + ++ G L +L+ +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEG--GELFDKVVGNKRLKEATCKLYFY 260
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLIS 357
Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLS 287
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+L+ +Q+L + Y H I+HRD+KP+N+L+S
Sbjct: 255 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 134 YRPPDVLL--GSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y P+VL+ G+ Y+ ++D W +G IL ++G P F R D+I
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 192 ETWEGVS 198
E W VS
Sbjct: 381 EVWAEVS 387
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILG 187
YR P+V+L + +S D+W +GCILIE G FP + + L + +ILG
Sbjct: 200 YRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFP-THDSKEHLAMMERILG 251
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCH 379
+HH +F+LL GLS + +K L +DH IR +Q+ + +++ H
Sbjct: 86 FEHHGHICIVFELL-GLS-------TYDFIKENGFLPFRLDH--IRKMAYQICKSVNFLH 135
Query: 380 RRRILHRDVKPQNLLISEIVFT 401
++ H D+KP+N+L + +T
Sbjct: 136 SNKLTHTDLKPENILFVQSDYT 157
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 171 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 140
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E +L E+ H IV LH T L + +++ DL + + +++ ++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAE 134
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
L L + H I++RD+KP+N+L+ E H I+L F L
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGL 172
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+++ ++ +L L + H I++RD+KP+N+L+ E
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 161
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P+V+ ++ S D W G ++ EM+TG F G ++ + + I K LG P
Sbjct: 189 TVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLGMP 246
Query: 190 TEETWEGVSLL 200
+ E SLL
Sbjct: 247 QFLSPEAQSLL 257
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILG 187
YR P+V+L + +S D+W +GCILIE G FP + + L + +ILG
Sbjct: 200 YRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFP-THDSKEHLAMMERILG 251
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCH 379
+HH +F+LL GLS + +K L +DH IR +Q+ + +++ H
Sbjct: 86 FEHHGHICIVFELL-GLS-------TYDFIKENGFLPFRLDH--IRKMAYQICKSVNFLH 135
Query: 380 RRRILHRDVKPQNLLISEIVFT 401
++ H D+KP+N+L + +T
Sbjct: 136 SNKLTHTDLKPENILFVQSDYT 157
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
E +L E+ H IV LH T L + +++ DL + + +++ ++ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAE 135
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
L L + H I++RD+KP+N+L+ E H I+L F L
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGL 173
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+++ ++ +L L + H I++RD+KP+N+L+ E
Sbjct: 128 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 162
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKI-LGTP 189
T+ Y P+V+ ++ S D W G ++ EM+TG F G ++ + + I K LG P
Sbjct: 190 TVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLGMP 247
Query: 190 TEETWEGVSLL 200
+ E SLL
Sbjct: 248 QFLSPEAQSLL 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 117
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 154
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 176 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 113 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 145
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+TL L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++D + V EYV + + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N++IS + +++ F + R ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIA 167
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N++IS
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS 150
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 182 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 171 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 140
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 111
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T Y P+ L G T YS D+W +G L+EM G
Sbjct: 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++D + V EYV + + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N++IS + +++ F + R ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIA 167
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N++IS
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS 150
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 182 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 111
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T Y P+ L G T YS D+W +G L+EM G
Sbjct: 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 111
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T Y P+ L G T YS D+W +G L+EM G
Sbjct: 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 199
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
E +L H NIV L D + + L + E+ + M L I++ Q
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHR 386
L L+Y H +I+HRD+K N+L + +D +I+L F G+S + R + R
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILFT-LD-GDIKLADF----GVSAKNTRTXIQR 165
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I E +L H IV L + L + E+ + M GL I++
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRD 387
Q+L L++ H +RI+HRD+K N+L++ +IRL F G+S + + + RD
Sbjct: 116 RQMLEALNFLHSKRIIHRDLKAGNVLMTL--EGDIRLADF----GVSAKNLKTLQKRD 167
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
I++ Q+L L++ H +RI+HRD+K N+L++
Sbjct: 110 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 143
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 115
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 152
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 174 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 209
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 143
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 171 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 140
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++D + V EYV + + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N++IS + +++ F + R ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIA 167
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N++IS
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS 150
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 182 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 171 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 140
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++ K L + ++V H + V E + + + R FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
++G+ Y H R++HRD+K NL ++ D ++++ F L + + R+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGERK 199
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + + E R FM Q ++G+ Y H R++HRD+K NL +
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEA-----RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 396 SE 397
++
Sbjct: 176 ND 177
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCIL ++ G P F ++E Y ++ K
Sbjct: 208 YIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++ K L + ++V H + V E + + + R FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
++G+ Y H R++HRD+K NL ++ D ++++ F L + + R+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGERK 199
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 336 LSYCHRRRIL--HRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 393
L C RR +L H+ K + R FM Q ++G+ Y H R++HRD+K NL
Sbjct: 121 LEICRRRSLLELHKRRK-------AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNL 173
Query: 394 LISE 397
+++
Sbjct: 174 FLND 177
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCIL ++ G P F ++E Y ++ K
Sbjct: 208 YIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++ K L + ++V H + V E + + + R FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
++G+ Y H R++HRD+K NL ++ D ++++ F L + + R+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGERK 199
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 336 LSYCHRRRIL--HRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 393
L C RR +L H+ K + R FM Q ++G+ Y H R++HRD+K NL
Sbjct: 121 LEICRRRSLLELHKRRK-------AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNL 173
Query: 394 LISE 397
+++
Sbjct: 174 FLND 177
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCIL ++ G P F ++E Y ++ K
Sbjct: 208 YIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRL-FM 329
+EA L LKH NI+ L + L V E+ L++ + SG +I + +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWA 111
Query: 330 FQLLRGLSYCHRRR---ILHRDVKPQNLLI 356
Q+ RG++Y H I+HRD+K N+LI
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 110 SNLTNQVVALKEIRLQEE---------EGITLWYRPPDVLLGSTEYSTSLDMWGVGCILI 160
+L+N+++ + + L E G W P ++ ++ +S D+W G +L
Sbjct: 148 GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE--VIRASMFSKGSDVWSYGVLLW 205
Query: 161 EMVTGLPTFPGV 172
E++TG F G+
Sbjct: 206 ELLTGEVPFRGI 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 270 AIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFM 329
+ E+ +L+ +H + L T L FV EY + + R +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H R +++RD+K +NL++ + H I F
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 171 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + +++ L Y H R +++RD+K +NL++ +
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK 140
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 138
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVN 166
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVN 166
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFP 170
T Y P+ L G T YS D+W +G L+EM G P
Sbjct: 193 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 111
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFP 170
T Y P+ L G T YS D+W +G L+EM G P
Sbjct: 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 111
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN 139
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFP 170
T Y P+ L G T YS D+W +G L+EM G P
Sbjct: 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 55 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 114
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVN 142
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVN 142
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T Y P+ L G T YS D+W +G L+EM G
Sbjct: 169 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRI 344
+ LH T L FV EYV+ Y + G + ++ GL + H+R I
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 345 LHRDVKPQNLLISEIDHHNIRLF 367
++RD+K N+++ H I F
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADF 164
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 140 LLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL-----GTPTEETW 194
++ Y S+D W G +L EM+ G P F G E D++F+ + P +
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQSIMEHNVSYPKSLSK 245
Query: 195 EGVSLLPG 202
E VS+ G
Sbjct: 246 EAVSICKG 253
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILIN 181
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
I E +L H IV L + L + E+ + M GL I++
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRD 387
Q+L L++ H +RI+HRD+K N+L++ +IRL F G+S + + + RD
Sbjct: 124 RQMLEALNFLHSKRIIHRDLKAGNVLMTL--EGDIRLADF----GVSAKNLKTLQKRD 175
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
I++ Q+L L++ H +RI+HRD+K N+L++
Sbjct: 118 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 151
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++ K L + ++V H + V E + + + R FM Q
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
++G+ Y H R++HRD+K NL ++ D ++++ F L + + R+
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGERK 183
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 336 LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
L C RR +L + + + E R FM Q ++G+ Y H R++HRD+K NL +
Sbjct: 105 LEICRRRSLLELHKRRKAVTEPEA-----RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 159
Query: 396 SE 397
++
Sbjct: 160 ND 161
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF--PGVREVYDQLDK 181
Y P+VL +S +D+W +GCIL ++ G P F ++E Y ++ K
Sbjct: 192 YIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI E + + F F
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 146
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI E
Sbjct: 147 LDLIYRDLKPENLLIDE 163
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 191 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 143
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILIN 169
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILIN 152
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++D + V EYV + + G +
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 137
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N++IS + +++ F + R ++
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIA 184
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N++IS
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMIS 167
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 199 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 281 KHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLL------- 333
+H ++V+L R+ + +++Y+ + ++RH G D + + Q L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYME---NGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 334 RGLSYCHRRRILHRDVKPQNLLISE 358
RGL Y H R I+HRDVK N+L+ E
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDE 174
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLISE 397
RGL Y H R I+HRDVK N+L+ E
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDE 174
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 272 REASLLKELKHN-NIVTLHDIVHTRS------TLTFVFEYVHTDLSQYMERHSGG--LDH 322
+E ++LK+ H+ NI T + ++ L V E+ + +++ G L
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRR 382
I ++LRGLS+ H+ +++HRD+K QN+L++E + ++L F + L RR
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 25/28 (89%)
Query: 370 QLLRGLSYCHRRRILHRDVKPQNLLISE 397
++LRGLS+ H+ +++HRD+K QN+L++E
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTE 164
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 281 KHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLL------- 333
+H ++V+L R+ + +++Y+ + ++RH G D + + Q L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYME---NGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 334 RGLSYCHRRRILHRDVKPQNLLISE 358
RGL Y H R I+HRDVK N+L+ E
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDE 174
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLISE 397
RGL Y H R I+HRDVK N+L+ E
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDE 174
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +R+ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMRIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 273 EASLLKELKHNNIVTLHD----IVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRL 327
EA LK L+H NIV +D V + + V E + L Y++R +R
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRS 133
Query: 328 FMFQLLRGLSYCHRRR--ILHRDVKPQNLLIS 357
+ Q+L+GL + H R I+HRD+K N+ I+
Sbjct: 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 165
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 134
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 174
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 163
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 135
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 175
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 135
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 175
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 135
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 175
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 120
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 160
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 134
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 174
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 235
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
+EA + +L H +V + + + V EY+ L Y+ H GL+ +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ + G+++ + +HRD+ +N L+
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLV 137
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 120
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 160
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 154
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 194
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 152 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 119
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 159
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 148
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 148
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 188
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 120
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 160
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 162
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 202
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 148
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 188
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L ++ +H + +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILIN 179
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 147
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 187
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 148
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 188
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-----TDLSQYMERHSGGLDHHNIRL 327
E L+K+L H NI L+++ + V E H L+ +++ +G ++
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 328 FMF-------QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
+ + + G + R + D + LIS I M Q+ L Y H
Sbjct: 138 QICPCPECNEEAINGSIHGFRESL---DFVQREKLISNI--------MRQIFSALHYLHN 186
Query: 381 RRILHRDVKPQNLLIS 396
+ I HRD+KP+N L S
Sbjct: 187 QGICHRDIKPENFLFS 202
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 131 TLWYRPPDVLLGSTE-YSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTP 189
T ++ P+VL + E Y D W G +L ++ G FPGV + D I ++L
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA----DTISQVLNKK 292
Query: 190 TEETWEGVSLLPGYNV 205
+E P YNV
Sbjct: 293 L--CFEN----PNYNV 302
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 147
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 187
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 186
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 148
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 188
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 74 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 134 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 187
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 162
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 202
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 147
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 187
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + +G + +
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 130
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVN 158
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+++GL+Y + +I+HRDVKP N+L++
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVN 158
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG---LPTFPGVREVYDQLDKI 182
T Y P+ L G T YS D+W +G L+EM G + + G +++ LD I
Sbjct: 185 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 318 GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSY 377
G L+ I + ++L+GL Y H R +HRD+K N+L+SE +++L F + L+
Sbjct: 111 GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTD 168
Query: 378 CHRRR 382
+R
Sbjct: 169 TQIKR 173
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRL 124
+ KLD++G+GS+ V+KG N T +VVA+K I L
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL 54
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
I + ++L+GL Y H R +HRD+K N+L+SE
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSE 151
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 115
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILI-DLNRGELKLIDF 155
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 113 RSFFWQVLEAVRHCHNXGVLHRDIKDENILID 144
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 180
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 181 LDLIYRDLKPENLLIDQ 197
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 225 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 270 AIREASLLKELK-HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL- 327
A+ E LL E H N++ + T L E + +L +E S + N++L
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 130
Query: 328 -------FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 347 RDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++V +NL + + +N + Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 120 KNVSDENLKLQK--EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 183
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 167
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 207
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 165 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 195
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 147
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 187
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 142
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 182
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 140 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 171
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 137 PDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P ++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMER--HSGGLDHHNIRLFMFQLLRGLSYC 339
H NIV LH++ H + V E ++ + ER M +L+ +S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNG--GELFERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 340 HRRRILHRDVKPQNLLIS-EIDHHNIRLFMFQLLR 373
H ++HRD+KP+NLL + E D+ I++ F R
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 368 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
M +L+ +S+ H ++HRD+KP+NLL ++
Sbjct: 112 MRKLVSAVSHMHDVGVVHRDLKPENLLFTD 141
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 270 AIREASLLKELK-HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL- 327
A+ E LL E H N++ + T L E + +L +E S + N++L
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 130
Query: 328 -------FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 347 RDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++V +NL + + +N + Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 120 KNVSDENLKLQK--EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 270 AIREASLLKELK-HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL- 327
A+ E LL E H N++ + T L E + +L +E S + N++L
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 112
Query: 328 -------FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 347 RDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++V +NL + + +N + Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 102 KNVSDENLKLQK--EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL++
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 179
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 285 IVTLHDIVHTRSTLTFVFEY-VHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
I LH + L V EY V DL + + + R ++ +++ + HR
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 344 ILHRDVKPQNLLISEIDHHNIRLFMF 369
+HRD+KP N+L+ H IRL F
Sbjct: 183 YVHRDIKPDNILLDRCGH--IRLADF 206
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R ++ +++ + HR +HRD+KP N+L+
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ +M G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 270 AIREASLLKELK-HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL- 327
A+ E LL E H N++ + T L E + +L +E S + N++L
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 112
Query: 328 -------FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 347 RDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
++V +NL + + +N + Q+ G+++ H +I+HRD+KPQN+L+S
Sbjct: 102 KNVSDENLKLQK--EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ H+N+V ++ L V E++ + H+ ++ I +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSV 150
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
LR LSY H + ++HRD+K ++L++
Sbjct: 151 LRALSYLHNQGVIHRDIKSDSILLT 175
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 357 SEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ ++ I +LR LSY H + ++HRD+K ++L++
Sbjct: 136 TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y T +D+W +G ++IEM+ G P +
Sbjct: 203 GTPYWMAPE--VISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS-------------- 317
EA L L+H N+V L +V L+ +F Y H DL +++ S
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 318 -GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
L+ + + Q+ G+ Y ++H+D+ +N+L+ D N+++ L R +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV--YDKLNVKISDLGLFREVY 179
Query: 377 YCHRRRILHRDVKPQNLLISEIVF 400
++L + P + E +
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIM 203
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 68 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 151
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 162
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 202
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 191
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 118
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 158
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 116 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 147
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 71 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 172
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 154
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 115
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 155
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 144
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
++EA +LK+ H NIV L + + + V E V D ++ L + +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
G+ Y + +HRD+ +N L++E
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTE 248
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 433 LPPGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
LPP ++EA +LK+ H NIV L + + + V E V
Sbjct: 151 LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 180
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 181 LDLIYRDLKPENLLIDQ 197
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 225 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVF--EYVHTDLSQYMERHSGGLDHHNIRLF 328
+RE L++ L H N++ L I+ L V H DL Q++ ++ F
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ RG+ Y ++ +HRD+ +N ++ E
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
F Q+ RG+ Y ++ +HRD+ +N ++ E
Sbjct: 129 FGLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVH--TDLSQYMERHSGGLDHHNIRLF 328
E LLK++ + ++ L D + + E DL ++ G L R F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSF 115
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
+Q+L + +CH +LHRD+K +N+LI +++ ++L F
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDF 155
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R F +Q+L + +CH +LHRD+K +N+LI
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILID 144
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEET 193
YRPP+V+L ++ D+W +GCIL E G F E + L + KILG
Sbjct: 214 YRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMMEKILGP----- 266
Query: 194 WEGVSLLPGYNVHR 207
+P + +HR
Sbjct: 267 ------IPSHMIHR 274
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTNL 403
++R +QL L + H ++ H D+KP+N+L F L
Sbjct: 133 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 173
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++R +QL L + H ++ H D+KP+N+L
Sbjct: 133 HVRHMAYQLCHALRFLHENQLTHTDLKPENILF 165
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 69 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
IRE +L E IV + ++ ++ E++ + + + + +
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 331 QLLRGLSYCHRR-RILHRDVKPQNLLIS 357
+LRGL+Y + +I+HRDVKP N+L++
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVN 149
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 371 LLRGLSYCHRR-RILHRDVKPQNLLIS 396
+LRGL+Y + +I+HRDVKP N+L++
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVN 149
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPT 190
T Y P+ L G T YS D+W +G L+E+ G +P +L+ IF G P
Sbjct: 176 TRSYMAPERLQG-THYSVQSDIWSMGLSLVELAVG--RYPIPPPDAKELEAIF---GRPV 229
Query: 191 EETWEG 196
+ EG
Sbjct: 230 VDGEEG 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFM 329
++EA +LK+ H NIV L + + + V E V D ++ L + +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
G+ Y + +HRD+ +N L++E
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTE 248
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 433 LPPGAPFTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV 476
LPP ++EA +LK+ H NIV L + + + V E V
Sbjct: 151 LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 309 LSQYMERHSGGLDHHNIRLFMF-QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
L Q++E+ G + L +F Q+ +G+ Y H +++++RD+KP N+ + +D +++
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL--VDTKQVKIG 164
Query: 368 MFQLLRGLSYCHRR 381
F L+ L +R
Sbjct: 165 DFGLVTSLKNDGKR 178
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 20/26 (76%)
Query: 370 QLLRGLSYCHRRRILHRDVKPQNLLI 395
Q+ +G+ Y H +++++RD+KP N+ +
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL 155
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 70 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 80 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 139
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 140 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 197
Query: 374 GLS 376
++
Sbjct: 198 DIN 200
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVTE 184
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEET 193
YRPP+V+L ++ D+W +GCIL E G F E + L + KILG
Sbjct: 237 YRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMMEKILGP----- 289
Query: 194 WEGVSLLPGYNVHR 207
+P + +HR
Sbjct: 290 ------IPSHMIHR 297
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTNL 403
++R +QL L + H ++ H D+KP+N+L F L
Sbjct: 156 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 196
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++R +QL L + H ++ H D+KP+N+L
Sbjct: 156 HVRHMAYQLCHALRFLHENQLTHTDLKPENILF 188
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 269 TAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL- 327
T ++E +++ L+H N++ +++ L F+ EY+ + + + + R+
Sbjct: 53 TFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS 112
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
F + G++Y H I+HRD+ N L+ E + N+ + F L R
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRE--NKNVVVADFGLAR 156
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI-GRFAEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 68 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 151
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS-------------- 317
EA L L+H N+V L +V L+ +F Y H DL +++ S
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 318 -GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
L+ + + Q+ G+ Y ++H+D+ +N+L+ D N+++ L R +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV--YDKLNVKISDLGLFREVY 196
Query: 377 YCHRRRILHRDVKPQNLLISEIVF 400
++L + P + E +
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIM 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 77 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 136
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 137 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 194
Query: 374 GLS 376
++
Sbjct: 195 DIN 197
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVTE 181
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V EY+ L +++++ G + +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRG 132
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 133 ISAGMKYLSDMGYVHRDLAARNILIN 158
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEET 193
YRPP+V+L ++ D+W +GCIL E G F E + L + KILG
Sbjct: 205 YRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMMEKILGP----- 257
Query: 194 WEGVSLLPGYNVHR 207
+P + +HR
Sbjct: 258 ------IPSHMIHR 265
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTNL 403
++R +QL L + H ++ H D+KP+N+L F L
Sbjct: 124 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 164
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 356
++R +QL L + H ++ H D+KP+N+L
Sbjct: 124 HVRHMAYQLCHALRFLHENQLTHTDLKPENILF 156
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 180
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 181 LDLIYRDLKPENLLIDQ 197
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 225 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 270 AIREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDHHNIRL 327
A RE LL+E +H N++ R E L +Y+E+ L I L
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL 123
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHN 363
Q GL++ H I+HRD+KP N+LIS + H
Sbjct: 124 LQ-QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 370 QLLRGLSYCHRRRILHRDVKPQNLLIS 396
Q GL++ H I+HRD+KP N+LIS
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILIS 152
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 74 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 154
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 155 LDLIYRDLKPENLLIDQ 171
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 199 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 251
Query: 374 GLS 376
++
Sbjct: 252 DIN 254
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVTE 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H N+V L +V + V E++ L ++ +H G + +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVN 179
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLD-----H 322
I E ++K + KH NI+ L L + EY +L +Y++ R GL+
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 323 HN---------IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
HN + +Q+ RG+ Y ++ +HRD+ +N+L++E + I F
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 226 IPEGES--MASAFLQVRDAAILNPMEHVHNCEKEGGNGPKNGAPFTAIREASLLKELKHN 283
IPEGE + A +++R+A PK A + EA ++ + +
Sbjct: 71 IPEGEKVKIPVAIMELREA-----------------TSPK--ANKEILDEAYVMASVDNP 111
Query: 284 NIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRR 342
++ L I T ST+ + + + L Y+ H + + + Q+ +G++Y R
Sbjct: 112 HVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 343 RILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
R++HRD+ +N+L+ H I F L G
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 184
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 152
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 153 LDLIYRDLKPENLLIDQ 169
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 197 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 75 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 134
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 135 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTE--NNVMKIADFGLAR 192
Query: 374 GLS 376
++
Sbjct: 193 DIN 195
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVTE 179
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 145
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 146 LDLIYRDLKPENLLIDQ 162
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 190 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
+ E +L+ + +V L S L V EY+ D+ ++ R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYA 147
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVH-----TDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYC 339
+VTLH T + L + +Y++ T LSQ ER + H +++++ +++ L +
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFT----EHEVQIYVGEIVLALEHL 175
Query: 340 HRRRILHRDVKPQNLLISEIDH 361
H+ I++RD+K +N+L+ H
Sbjct: 176 HKLGIIYRDIKLENILLDSNGH 197
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 131 TLWYRPPDVLLGS-TEYSTSLDMWGVGCILIEMVTGLPTF 169
T+ Y PD++ G + + ++D W +G ++ E++TG F
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE---IVFTNL 403
H +++++ +++ L + H+ I++RD+K +N+L+ +V T+
Sbjct: 159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF 203
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLIIDQ 176
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P++++ S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFM 329
+ E +L+ + +V L S L V EY+ D+ ++ R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYA 147
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 160 LDLIYRDLKPENLLIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EYV R G + R +
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NLLI + + + F F
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M + G + H RRI R +P + R + Q++ Y H
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 152
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 153 LDLIYRDLKPENLLIDQ 169
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 197 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 69 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 70 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 70 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 70 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 92 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 150
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 193
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 175
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 74 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 74 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 69 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 228 EGESMASAFLQVR---DAAILNPM--EHVHNCEKEGGNGPKNGAPFT--AIREASLLKEL 280
+G + +AFL +R D + +H+ N + +N +T A EA +LK++
Sbjct: 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKI 88
Query: 281 KHNNI-----VTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS-GGLDHHNIRLFMFQLLR 334
++++I V H + +FE + L + + R++ G +I+L+ ++L+
Sbjct: 89 QNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148
Query: 335 GLSYCHRRRILHRDVKPQNLLISE 358
L+Y + + H D+KP+N+L+ +
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDD 172
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG 165
T YR P+V+L + + S DMW GC+L E+ TG
Sbjct: 222 TRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTG 255
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVF 400
+I+L+ ++L+ L+Y + + H D+KP+N+L+ + F
Sbjct: 138 DIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYF 175
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + H+NI+ L ++ + + EY+ L +++ G + +
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVN 181
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 269 TAIREASLLKELKHNN--------IVTLHDIVHTRST----LTFVFEYV-HTDLSQYMER 315
TA+ E LLK ++ ++ +V L D + VFE + H L ++
Sbjct: 73 TALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKS 132
Query: 316 HSGGLDHHNIRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLISEIDHHNIRL 366
+ GL ++ + Q+L+GL Y H + +I+H D+KP+N+L+ D + R+
Sbjct: 133 NYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRM 184
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF-PGVREVY----DQLDKIFKILGT 188
YR +VL+G+ YST D+W C+ E+ TG F P E Y D + I ++LG+
Sbjct: 251 YRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 364 IRLFMFQLLRGLSYCHRR-RILHRDVKPQNLLIS 396
++ + Q+L+GL Y H + +I+H D+KP+N+L+
Sbjct: 142 VKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMC 175
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 97 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 156
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 157 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 186
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 73 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 131
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 174
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 156
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 355 LISEIDHHNIRLFMF-----QLLRGLSYCHRR-RILHRDVKPQNLLISEIVFTNLXXXXX 408
LI + +H I L QLL GL Y HRR I+H D+KP+N+L+ EIV +
Sbjct: 119 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM-EIVDSPENLIQI 177
Query: 409 XXXXXXXXXWWFESKSNINLSFHYLPP----GAPF 439
W+ E +N + Y P GAP+
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 212
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 298 LTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-----QLLRGLSYCHRR-RILHRDVKP 351
+ VFE + +L ++++ +H I L QLL GL Y HRR I+H D+KP
Sbjct: 105 VVMVFEVLGENLLALIKKY----EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 160
Query: 352 QNLLISEID 360
+N+L+ +D
Sbjct: 161 ENVLMEIVD 169
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF-PGVREVY----DQLDKIFKILG 187
YR P+VLLG+ + D+W C++ E++TG F P Y D + +I ++LG
Sbjct: 201 YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 69 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 61 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 119
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 144
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 71 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 130
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 131 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 160
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 71 EAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 154
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 77 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 135
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ +G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 178
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 160
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 285 IVTLHDIVHTRSTLTFVFEY-VHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
I TLH + L V +Y V DL + + L R ++ +++ + H+
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 344 ILHRDVKPQNLLISEIDHHNIRLFMF 369
+HRD+KP N+L+ H IRL F
Sbjct: 196 YVHRDIKPDNILMDMNGH--IRLADF 219
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
R ++ +++ + H+ +HRD+KP N+L+
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 98 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 157
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 158 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 187
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHN-------- 324
E ++ ++K+ +T I+ + ++EY+ D + + LD +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 325 IRLFMFQLLRGLSYCHRRR-ILHRDVKPQNLLISE 358
I+ + +L SY H + I HRDVKP N+L+ +
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 364 IRLFMFQLLRGLSYCHRRR-ILHRDVKPQNLLISE 397
I+ + +L SY H + I HRDVKP N+L+ +
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 355 LISEIDHHNIRLFMF-----QLLRGLSYCHRR-RILHRDVKPQNLLISEIVFTNLXXXXX 408
LI + +H I L QLL GL Y HRR I+H D+KP+N+L+ EIV +
Sbjct: 119 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM-EIVDSPENLIQI 177
Query: 409 XXXXXXXXXWWFESKSNINLSFHYLPP----GAPF 439
W+ E +N + Y P GAP+
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 212
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 298 LTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-----QLLRGLSYCHRR-RILHRDVKP 351
+ VFE + +L ++++ +H I L QLL GL Y HRR I+H D+KP
Sbjct: 105 VVMVFEVLGENLLALIKKY----EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 160
Query: 352 QNLLISEID 360
+N+L+ +D
Sbjct: 161 ENVLMEIVD 169
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF-PGVREVY----DQLDKIFKILG 187
YR P+VLLG+ + D+W C++ E++TG F P Y D + +I ++LG
Sbjct: 201 YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 138 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLT----FVFEYVHTDLSQYMERHSGGLDHHNIRL 327
REA L H IV ++ + V EYV + + G +
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
+ + L++ H+ I+HRDVKP N++IS + +++ F + R ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIA 167
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 373 RGLSYCHRRRILHRDVKPQNLLIS 396
+ L++ H+ I+HRDVKP N++IS
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS 150
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPG 171
T Y P+ G + + S D++ +GC+L E++TG P F G
Sbjct: 182 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + EY +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 135
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 136 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 165
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 139 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 268 FTAIR-EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIR 326
F A R E ++L++ +H NI+ + T+ L V ++ S Y H +
Sbjct: 76 FQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGS-SLYKHLHV-----QETK 128
Query: 327 LFMFQLL-------RGLSYCHRRRILHRDVKPQNLLISE 358
MFQL+ +G+ Y H + I+HRD+K N+ + E
Sbjct: 129 FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
Query: 368 MFQLL-------RGLSYCHRRRILHRDVKPQNLLISE 397
MFQL+ +G+ Y H + I+HRD+K N+ + E
Sbjct: 131 MFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 137 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 166
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 133
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 134 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 163
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 138 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ Y ++ +HRD+ +N ++ E
Sbjct: 139 GLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I E +++E K+ NIV D L V EY+ L+ + +D I
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ L+ L + H +++HRD+K N+L+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+D I + L+ L + H +++HRD+K N+L+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEE 127
Y + +++G+G+ TV+ T Q VA++++ LQ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y +D+W +G + IEM+ G P +
Sbjct: 178 GTPYWMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I E +++E K+ NIV D L V EY+ L+ + +D I
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ L+ L + H +++HRD+K N+L+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+D I + L+ L + H +++HRD+K N+L+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEE 127
Y + +++G+G+ TV+ T Q VA++++ LQ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y +D+W +G + IEM+ G P +
Sbjct: 178 GTPYWMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I E +++E K+ NIV D L V EY+ L+ + +D I
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ L+ L + H +++HRD+K N+L+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+D I + L+ L + H +++HRD+K N+L+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEE 127
Y + +++G+G+ TV+ T Q VA++++ LQ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y +D+W +G + IEM+ G P +
Sbjct: 178 GTPYWMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H NI+ L +V + + EY+ L ++ ++ G + +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVN 165
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I E +++E K+ NIV D L V EY+ L+ + +D I
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 123
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ L+ L + H +++HRD+K N+L+
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILL 150
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+D I + L+ L + H +++HRD+K N+L+
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 150
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEE 127
Y + +++G+G+ TV+ T Q VA++++ LQ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y +D+W +G + IEM+ G P +
Sbjct: 179 GTPYWMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 74 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V E + L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILIN 181
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 276 LLKELKHNNIVTLHDIV-----HTRSTLTFVFEYVHTDLSQYMERHSG-GLDHHNIRLFM 329
L E+ H +IV + + V H V EYV Q ++R G L ++
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVG---GQSLKRSKGQKLPVAEAIAYL 188
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCH 379
++L LSY H +++ D+KP+N++++E I L + Y +
Sbjct: 189 LEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLY 238
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 23/31 (74%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
++ ++L LSY H +++ D+KP+N++++E
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 64 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 122
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
+ G++Y RR++HRD+ +N+L+ H I F L G
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ G++Y RR++HRD+ +N+L+
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLV 147
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V E + L ++ +H + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILIN 152
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 67 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQ 331
EA ++ + + ++ L I T ST+ + + + L Y+ H + + + Q
Sbjct: 69 EAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLF 367
+ +G++Y RR++HRD+ +N+L+ H I F
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G++Y RR++HRD+ +N+L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ +G+ + ++ +HRD+ +N ++ E +++ F L R +
Sbjct: 198 GLQVAKGMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDM 242
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + Y +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H NI+ L +V + + EY+ L ++ ++ G + +
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVN 144
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H NI+ L +V + + EY+ L ++ ++ G + +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVN 150
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFMFQ 331
EAS++ + H NI+ L +V + V E + L ++ +H + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+LI+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 161 LDLIYRDLKPENLMIDQ 177
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLMIDQ 176
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGF 187
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLMIDQ 176
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H N++ L +V + + + E++ L ++ ++ G + +
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILVN 169
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRI 344
+ LH T L FV EYV+ Y + G + + ++ GL + + I
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 345 LHRDVKPQNLLISEIDHHNIRLF 367
++RD+K N+++ H I F
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADF 165
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 22/102 (21%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL-----GT 188
Y P+++ Y S+D W G +L EM+ G F G E D++F+ +
Sbjct: 187 YIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIMEHNVAY 240
Query: 189 PTEETWEGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGE 230
P + E V++ G + G +LG PEGE
Sbjct: 241 PKSMSKEAVAICKGLMTK----HPGKRLGCG-------PEGE 271
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 271 IREASLLKEL-KHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYME-RHSGGLDH----- 322
+ E ++K + KH NI+ L L + Y +L +Y+ R G+++
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 323 ---------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
++ +QL RG+ Y ++ +HRD+ +N+L++E ++ +++ F L R
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLAR 205
Query: 374 GLS 376
++
Sbjct: 206 DIN 208
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 369 FQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+QL RG+ Y ++ +HRD+ +N+L++E
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI R +P + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLMIDQ 176
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 179
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 180 LQALSVLHAQGVIHRDIKSDSILLT 204
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 232 GTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H NI+ L +V V EY+ L ++ H G + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ G+ Y +HRD+ +N+L+
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E +L + H I+ + + + +Y+ + R S + + + ++
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
Query: 333 LRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
L Y H + I++RD+KP+N+L+ + H I F F
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF 152
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 365 RLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ + ++ L Y H + I++RD+KP+N+L+ +
Sbjct: 109 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDK 141
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 125
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLT 150
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 178 GTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 139 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H NI+ L +V V EY+ L ++ H G + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ G+ Y +HRD+ +N+L+
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 140 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 84 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 143
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 144 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 173
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 134
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLT 159
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 187 GTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 136
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLT 161
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 189 GTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 256
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLT 281
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 309 GTPYWMAP--ELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 140 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQL 332
E ++++ +H N+V +++ L V E++ + H+ ++ I +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAV 129
Query: 333 LRGLSYCHRRRILHRDVKPQNLLIS 357
L+ LS H + ++HRD+K ++L++
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLT 154
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P L+ Y +D+W +G ++IEMV G P +
Sbjct: 182 GTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGT 188
T +R P+VL +T++DMW G I + +++G F + L +I I G+
Sbjct: 209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGS 266
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 335 GLSYCHRRR----ILHRDVKPQNLL--ISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDV 388
G+ YC R+ I ++ ++ L ++ + +R +M L + L H+ I+HRDV
Sbjct: 84 GVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDV 143
Query: 389 KPQNLL 394
KP N L
Sbjct: 144 KPSNFL 149
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 312 YMERHS-----GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Y+E S L +R +M L + L H+ I+HRDVKP N L +N RL
Sbjct: 101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFL------YNRRL 154
Query: 367 FMFQLL 372
+ L+
Sbjct: 155 KKYALV 160
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 139 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 293 HTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
T+ L FV EY++ Y + D + +++ GL + H + I++RD+K
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 353 NLLISEIDHHNIRLF 367
N+L+ + H I F
Sbjct: 149 NILLDKDGHIKIADF 163
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVRE 174
Y P++LLG +Y+ S+D W G +L EM+ G F G E
Sbjct: 185 YIAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ RG+ + R+ +HRD+ +N+L+SE ++ +++ F L R +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSE--NNVVKICDFGLARDI 249
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
I ++ + FQ+ RG+ + R+ +HRD+ +N+L+SE
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSE 234
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 293 HTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
T+ L FV EY++ Y + D + +++ GL + H + I++RD+K
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 353 NLLISEIDHHNIRLF 367
N+L+ + H I F
Sbjct: 148 NILLDKDGHIKIADF 162
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVRE 174
Y P++LLG +Y+ S+D W G +L EM+ G F G E
Sbjct: 184 YIAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRI 344
+ LH T L FV EYV+ Y + G + + ++ GL + + I
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 345 LHRDVKPQNLLISEIDHHNIRLF 367
++RD+K N+++ H I F
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADF 486
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%)
Query: 140 LLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKIL-----GTPTEETW 194
++ Y S+D W G +L EM+ G F G E D++F+ + P +
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIMEHNVAYPKSMSK 567
Query: 195 EGVSLLPGYNVHRDAPYTGNKLGLTFPRLYDIPEGE 230
E V++ G + G +LG PEGE
Sbjct: 568 EAVAICKGLMTK----HPGKRLGCG-------PEGE 592
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 285 IVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRI 344
+V L S L V EY R G + R + Q++ Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 345 LHRDVKPQNLLISEIDHHNIRLFMF 369
++RD+KP+NLLI + + + F F
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGF 188
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + + G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NLLI +
Sbjct: 161 LDLIYRDLKPENLLIDQ 177
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTL--TFVFEYVHT-DLSQYMERHSG--GLDHHNI 325
+RE +LK+L H NIV L I +T + E+ L +E S GL
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLL 355
+ + ++ G+++ I+HR++KP N++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 271 IREASLLKELKHNNIVTLHDI-VHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLF 328
+ E ++K+ H N+++L I + + + V Y+ H DL ++ + ++ F
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 329 MFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q+ +G+ + ++ +HRD+ +N ++ E
Sbjct: 137 GLQVAKGMKFLASKKFVHRDLAARNCMLDE 166
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 276 LLKELKHNNIVTLHDI------VHTRSTLTFVFEYVHTDLSQ--YMERHSGGLDHHNIRL 327
LL+ +H NI+TL D+ V+ + L E + L Q + ER + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAV------- 121
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLL 355
+F + + + Y H + ++HRD+KP N+L
Sbjct: 122 -LFTITKTVEYLHAQGVVHRDLKPSNIL 148
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 368 MFQLLRGLSYCHRRRILHRDVKPQNLL 394
+F + + + Y H + ++HRD+KP N+L
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNIL 148
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + +H NI+ L +V + + E++ L ++ + G + +
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVN 150
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 296 STLTFVFEYV-HTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 354
ST+ V + + + L ++ + G L ++ + Q+ +G+SY R++HRD+ +N+
Sbjct: 91 STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNV 150
Query: 355 LISEIDHHNIRLF 367
L+ +H I F
Sbjct: 151 LVKSPNHVKITDF 163
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+ Q+ +G+SY R++HRD+ +N+L+
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLV 152
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 164 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 220
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 235
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTN 402
++S ++ + Q+ RGL Y H ++H D+KP N+ IS N
Sbjct: 108 IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN 155
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
++ + Q+ RGL Y H ++H D+KP N+ IS
Sbjct: 117 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTN 402
++S ++ + Q+ RGL Y H ++H D+KP N+ IS N
Sbjct: 106 IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN 153
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
++ + Q+ RGL Y H ++H D+KP N+ IS
Sbjct: 115 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTN 402
++S ++ + Q+ RGL Y H ++H D+KP N+ IS N
Sbjct: 104 IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN 151
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
++ + Q+ RGL Y H ++H D+KP N+ IS
Sbjct: 113 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 145
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 349 VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 174
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 189
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 276 LLKELKHNNIVTLHDI------VHTRSTLTFVFEYVHTDLSQ--YMERHSGGLDHHNIRL 327
LL+ +H NI+TL D+ V+ + L E + L Q + ER + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV------- 121
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLL 355
+F + + + Y H + ++HRD+KP N+L
Sbjct: 122 -LFTITKTVEYLHAQGVVHRDLKPSNIL 148
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 368 MFQLLRGLSYCHRRRILHRDVKPQNLL 394
+F + + + Y H + ++HRD+KP N+L
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNIL 148
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 198
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 355 LISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIVFTN 402
++S ++ + Q+ RGL Y H ++H D+KP N+ IS N
Sbjct: 106 IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN 153
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
++ + Q+ RGL Y H ++H D+KP N+ IS
Sbjct: 115 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q++ Y H +++RD+KP+NL+I +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLMIDQ 176
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 282 HNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHR 341
H + L T L FV E+V+ + + S D R + +++ L + H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 342 RRILHRDVKPQNLLISEIDHHNIRLF 367
+ I++RD+K N+L+ H + F
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADF 168
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + +H NI+ L +V + + E++ L ++ + G + +
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HRD+ +N+L++
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVN 152
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 349 VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 174
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 189
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 198
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + +V L S L V EY R G + R +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q++ Y H +++RD+KP+NL+I +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 159
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 160 LDLIYRDLKPENLMIDQ 176
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 349 VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 174
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 189
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 349 VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 174
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 189
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 341 RRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
R + V P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 198
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 26/133 (19%)
Query: 272 REASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLDHH 323
REA L+ ELK H NIV L + +FEY + DL Y+
Sbjct: 92 REA-LMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRI 383
I Y +++R+ + + N+L E ++ F +Q+ +G+ + +
Sbjct: 151 EIE-----------YENQKRL--EEEEDLNVLTFE----DLLCFAYQVAKGMEFLEFKSC 193
Query: 384 LHRDVKPQNLLIS 396
+HRD+ +N+L++
Sbjct: 194 VHRDLAARNVLVT 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 276 LLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH---------------SGG 319
L K H NI+ L R L EY H +L ++ + +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
L + F + RG+ Y +++ +HRD+ +N+L+ E ++ ++ F L RG
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRG 191
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 336 LSYCHRRRILHRD--VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 393
L + + R+L D N S + + F + RG+ Y +++ +HRD+ +N+
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 173
Query: 394 LISE 397
L+ E
Sbjct: 174 LVGE 177
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 276 LLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH---------------SGG 319
L K H NI+ L R L EY H +L ++ + +
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
L + F + RG+ Y +++ +HRD+ +N+L+ E ++ ++ F L RG
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRG 181
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 336 LSYCHRRRILHRD--VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 393
L + + R+L D N S + + F + RG+ Y +++ +HRD+ +N+
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 163
Query: 394 LISE 397
L+ E
Sbjct: 164 LVGE 167
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
I E +++E K+ NIV D L V EY+ L+ + +D I
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 123
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLI 356
+ L+ L + H +++HR++K N+L+
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILL 150
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 91 YIKLDQLGEGSYATVFKGYSNLTNQVVALKEIRLQEE 127
Y + +++G+G+ TV+ T Q VA++++ LQ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 359 IDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
+D I + L+ L + H +++HR++K N+L+
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL 150
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ Y +D+W +G + IEM+ G P +
Sbjct: 179 GTPYWMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 173 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPF 210
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 284 NIVTLHDIV----HTRSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLS 337
+IV + D+ H + L + E + S+ ER M + +
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 338 YCHRRRILHRDVKPQNLLIS 357
+ H I HRDVKP+NLL +
Sbjct: 124 FLHSHNIAHRDVKPENLLYT 143
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
M + + + H I HRDVKP+NLL +
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 192 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPF 229
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 284 NIVTLHDIV----HTRSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLS 337
+IV + D+ H + L + E + S+ ER M + +
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 338 YCHRRRILHRDVKPQNLLIS 357
+ H I HRDVKP+NLL +
Sbjct: 143 FLHSHNIAHRDVKPENLLYT 162
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
M + + + H I HRDVKP+NLL +
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTL--TFVFEYVHT-DLSQYMERHSG--GLDHHNI 325
+RE +LK+L H NIV L I +T + E+ L +E S GL
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 326 RLFMFQLLRGLSYCHRRRILHRDVKPQNLL 355
+ + ++ G+++ I+HR++KP N++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%)
Query: 350 KPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
KP++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 136 KPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSE 183
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSE--KNVVKICDFGLARDI 198
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + + L S L V EY R G + R +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 161 LDLIYRDLKPENLMIDQ 177
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + + L S L V EY R G + R +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI------------GRFSEPHARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 161 LDLIYRDLKPENLMIDQ 177
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 182 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 353 NLL 355
NLL
Sbjct: 147 NLL 149
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLL 149
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 226 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 263
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 190
Query: 353 NLL 355
NLL
Sbjct: 191 NLL 193
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLL 193
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 232 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 269
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 196
Query: 353 NLL 355
NLL
Sbjct: 197 NLL 199
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 172 IMKSIGEAIQYLHSINIAHRDVKPENLL 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 278 KELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGG----------LDHHNIRL 327
+EL N +V + D H + V +L ME GG L+ I
Sbjct: 86 RELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT 145
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+L+ L+Y H + ++HRD+K ++L++
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 129 GITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
G W P ++ + Y+T +D+W +G ++IEMV G P +
Sbjct: 203 GTPYWMAPE--VISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 127 EEGITLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
E T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 176 EPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 353 NLL 355
NLL
Sbjct: 145 NLL 147
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLL 147
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 323 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDH 361
H +R FQL + + + H ++ H D+KP+N+L D+
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 175
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILG 187
YR P+V+L +S D+W +GCI+ E G F + + L + +ILG
Sbjct: 219 YRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQ-THDNREHLAMMERILG 270
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 362 HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLI 395
H +R FQL + + + H ++ H D+KP+N+L
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILF 170
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 187 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 224
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 151
Query: 353 NLL 355
NLL
Sbjct: 152 NLL 154
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 127 IMKSIGEAIQYLHSINIAHRDVKPENLL 154
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 182 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 353 NLL 355
NLL
Sbjct: 147 NLL 149
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLL 149
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 186 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 223
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 150
Query: 353 NLL 355
NLL
Sbjct: 151 NLL 153
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 126 IMKSIGEAIQYLHSINIAHRDVKPENLL 153
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 285 IVTLHDIVHTRSTLTFVFEY-VHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
I LH + L V +Y V DL + + L R ++ +++ + H+
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 344 ILHRDVKPQNLLISEIDHHNIRLFMF 369
+HRD+KP N+L+ +++ H IRL F
Sbjct: 212 YVHRDIKPDNVLL-DVNGH-IRLADF 235
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 188 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 225
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 152
Query: 353 NLL 355
NLL
Sbjct: 153 NLL 155
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLL 155
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 181 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 218
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 145
Query: 353 NLL 355
NLL
Sbjct: 146 NLL 148
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 121 IMKSIGEAIQYLHSINIAHRDVKPENLL 148
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ + + L S L V EY R G + R +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF 369
Q++ Y H +++RD+KP+NL+I + + + F F
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
Y P+++L S Y+ ++D W +G ++ EM G P F
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 321 DHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHR 380
D+ N+ + M G + H RRI R +P + R + Q++ Y H
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI-GRFXEP-----------HARFYAAQIVLTFEYLHS 160
Query: 381 RRILHRDVKPQNLLISE 397
+++RD+KP+NL+I +
Sbjct: 161 LDLIYRDLKPENLMIDQ 177
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 180 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 353 NLL 355
NLL
Sbjct: 145 NLL 147
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLL 147
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTF 169
T +Y P+VL G +Y S DMW +G I+ ++ G P F
Sbjct: 196 TPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPF 233
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 295 RSTLTFVFEYVHTD--LSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQ 352
R L V E + S+ +R M + + Y H I HRDVKP+
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 160
Query: 353 NLL 355
NLL
Sbjct: 161 NLL 163
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLL 394
M + + Y H I HRDVKP+NLL
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLL 163
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS------------- 317
+ E ++LK++ H +++ L+ L + EY + R S
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 318 ---GGLDHHNIRL--------FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
LDH + R F +Q+ +G+ Y +++HRD+ +N+L++E I
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 367 F 367
F
Sbjct: 194 F 194
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 285 IVTLHDIVHTRSTLTFVFEY-VHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRR 343
I LH + L V +Y V DL + + L R ++ +++ + H+
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 344 ILHRDVKPQNLLISEIDHHNIRLFMF 369
+HRD+KP N+L+ +++ H IRL F
Sbjct: 196 YVHRDIKPDNVLL-DVNGH-IRLADF 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQ 331
E +L++ +H NI+ T+ L V ++ + L ++ + + Q
Sbjct: 58 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISE 358
RG+ Y H + I+HRD+K N+ + E
Sbjct: 117 TARGMDYLHAKSIIHRDLKSNNIFLHE 143
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L SE +L Q RG
Sbjct: 67 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARG 120
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 121 MDYLHAKSIIHRDLKSNNIFLHE 143
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQ 331
E +L++ +H NI+ T+ L V ++ + L ++ + + Q
Sbjct: 70 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISE 358
RG+ Y H + I+HRD+K N+ + E
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHE 155
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L SE +L Q RG
Sbjct: 79 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARG 132
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHE 155
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS------------- 317
+ E ++LK++ H +++ L+ L + EY + R S
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 318 ---GGLDHHNIRL--------FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
LDH + R F +Q+ +G+ Y +++HRD+ +N+L++E I
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 367 F 367
F
Sbjct: 194 F 194
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ + Y ++ LHRD+ +N L++ D +++ F L R
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVN--DQGVVKVSDFGLSR 168
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ + Y ++ LHRD+ +N L++ D +++ F L R
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVN--DQGVVKVSDFGLSR 168
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 180 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 226
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 241
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 270 AIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS-GGL 320
A + +L+ ELK H NIV L + + EY + DL ++ R + L
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 321 DHHNIRL--------FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLL 372
D + R F Q+ +G+++ + +HRDV +N+L++ + H ++ F L
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT--NGHVAKIGDFGLA 199
Query: 373 RGL 375
R +
Sbjct: 200 RDI 202
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 189 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 235
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 250
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 228
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 243
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ + QLL + Y H + +++RDVKP+N LI
Sbjct: 98 TVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIG 131
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ + QLL + Y H + +++RDVKP+N LI
Sbjct: 98 TVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIG 131
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 187 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 233
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 248
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 270 AIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS-GGL 320
A + +L+ ELK H NIV L + + EY + DL ++ R + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 321 DHHNIRL--------FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLL 372
D + R F Q+ +G+++ + +HRDV +N+L++ + H ++ F L
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT--NGHVAKIGDFGLA 207
Query: 373 RGL 375
R +
Sbjct: 208 RDI 210
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 185
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 200
>pdb|2WDC|A Chain A, Termus Thermophilus Sulfate Thiohydrolase Soxb In Complex
With Glycerol
pdb|2WDD|A Chain A, Termus Thermophilus Sulfate Thiohydrolase Soxb In Complex
With Sulfate
pdb|2WDE|A Chain A, Termus Thermophilus Sulfate Thiohydrolase Soxb In Complex
With Thiosulfate
pdb|2WDF|A Chain A, Termus Thermophilus Sulfate Thiohydrolase Soxb
Length = 562
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 59/162 (36%), Gaps = 26/162 (16%)
Query: 99 EGSYATVFKGYSNLTNQVVALKEIRLQEEEGITLWYRPPDVLLGSTEYSTSLDMWGVGCI 158
EG A V G TN ++L L E + W L ++ S W +G
Sbjct: 121 EGGKALVLDGGDTWTNSGLSL----LTRGEAVVRWQN-----LVGVDHMVSHWEWTLGRE 171
Query: 159 LIEMVTGLPTFPGVREVYDQLDKIFKILGTPTEETWEGVSLLPGYNVHRDAPYTGNKLGL 218
+E + GL F G Y+ +D +F G L P Y +HR PY +G
Sbjct: 172 RVEELLGL--FRGEFLSYNIVDDLF------------GDPLFPAYRIHRVGPYALAVVGA 217
Query: 219 TFPRLYDIPEGESMASAFLQVRDAAILNPMEHVHNCEKEGGN 260
++P + + ES D L E V EG N
Sbjct: 218 SYPYV-KVSHPESFTEGLSFALDERRLQ--EAVDKARAEGAN 256
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 162
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 162
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 60 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
+L + H+ I+H D+KP N LI +
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVD 146
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 271 IREASLLKELK-HNNIVTLHDIVHT--------RSTLTFVFEYVHTDLSQYMERHS--GG 319
I+E +K+L H NIV ++ + E L +++++ G
Sbjct: 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRR--ILHRDVKPQNLLISEIDHHNIRLFMF 369
L + +Q R + + HR++ I+HRD+K +NLL+S + I+L F
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS--NQGTIKLCDF 182
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 367 FMFQLLRGLSYCHRRR--ILHRDVKPQNLLIS 396
+Q R + + HR++ I+HRD+K +NLL+S
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 351 PQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
P++L + ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 198
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 162
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 56 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 114
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
+L + H+ I+H D+KP N LI +
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVD 142
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 476
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 519
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 477
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 520
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 134
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI 160
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 134
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI 160
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLR 373
+ + Y ++ LHRD+ +N L++ D +++ F L R
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVN--DQGVVKVSDFGLSR 159
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 EASLLKELKH--NNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
E + L +L+ + I+ L+D T + V E + DL+ ++++ +D + +
Sbjct: 57 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS-IDPWERKSYWK 115
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLI 356
+L + H+ I+H D+KP N LI
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLI 141
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+REA ++ +L + IV L + + + + L +++ + N+ +
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 117
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ G+ Y + +HRD+ +N+L+ ++ H ++ F L + L
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLL--VNRHYAKISDFGLSKALG 161
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 268 FTAIREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRL 327
TA E L + N+V+ +++ H T+ Y+H D+ + H + H +I+
Sbjct: 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159
Query: 328 FMFQLLRGLSYC 339
L L+ C
Sbjct: 160 KNVLLKNNLTAC 171
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 134
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 134
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 177
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 132
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 68 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 121
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHE 144
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 59 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 116
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ + Y ++ LHRD+ +N L+++
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVND 140
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ + Y ++ LHRD+ +N L+++
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVND 140
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ + Y ++ LHRD+ +N L+++
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVND 139
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHS------------- 317
+ E ++LK++ H +++ L+ L + EY + R S
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 318 ---GGLDHHNIRL--------FMFQLLRGLSYCHRRRILHRDVKPQNLLISE 358
LDH + R F +Q+ +G+ Y ++HRD+ +N+L++E
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE 185
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 276 LLKELKHNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERH---------------SGG 319
L K H NI+ L R L EY H +L ++ + +
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 320 LDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRG 374
L + F + RG+ Y +++ +HR++ +N+L+ E ++ ++ F L RG
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGE--NYVAKIADFGLSRG 188
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 336 LSYCHRRRILHRD--VKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNL 393
L + + R+L D N S + + F + RG+ Y +++ +HR++ +N+
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNI 170
Query: 394 LISE 397
L+ E
Sbjct: 171 LVGE 174
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHT-DLSQYMERHSGGLDHHNIRLFM 329
+ EAS++ + H N++ L +V + + + E++ L ++ ++ G + +
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ G+ Y +HR + +N+L++
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVN 143
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 63 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 116
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHE 139
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 54 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 111
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 161
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVH-TDLSQYMERHSGGLDHHNIRLFMFQ 331
E +L++ +H NI+ T L V ++ + L ++ + + Q
Sbjct: 70 EVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 332 LLRGLSYCHRRRILHRDVKPQNLLISE 358
RG+ Y H + I+HRD+K N+ + E
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHE 155
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L SE +L Q RG
Sbjct: 79 HVNILLFMGYSTAPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARG 132
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHE 155
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTD-LSQYMERHSGGLDHHNIRLFM 329
I EA ++ L H +V L+ + + + + EY+ L Y+ +
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 330 FQLLRGLSYCHRRRILHRDVKPQNLLISE 358
+ + Y ++ LHRD+ +N L+++
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVND 135
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 63 HVNILLFMGYSTAPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 116
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHE 139
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T L V ++ S Y H I+L
Sbjct: 54 EVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 111
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 63 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 116
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHE 139
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 54 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 111
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 118
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 161
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 124
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 167
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 68 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 121
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHE 144
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 59 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 116
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 128 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 160
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 128 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 160
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 288 LHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHR 347
LHD + +S + + +DL + E ++ + ++L L Y H +H
Sbjct: 118 LHD-KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVK--PQNLLISEIVFTNL 403
D+K NLL++ + + L + GL+Y + +H++ K P+ I FT++
Sbjct: 177 DIKASNLLLNYKNPDQVYLVDY----GLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSI 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 112
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 155
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 270 AIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHS---- 317
A + +L+ ELK H NIV L + + EY + DL ++ R S
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 318 ---------GGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFM 368
L ++ F Q+ +G+++ + +HRDV +N+L++ + H ++
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT--NGHVAKIGD 207
Query: 369 FQLLRGL 375
F L R +
Sbjct: 208 FGLARDI 214
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 65 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 118
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 119 MDYLHAKSIIHRDLKSNNIFLHE 141
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 56 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 113
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 141
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 288 LHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHR 347
LHD + +S + + +DL + E ++ + ++L L Y H +H
Sbjct: 118 LHD-KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176
Query: 348 DVKPQNLLISEIDHHNIRLFMFQLLRGLSYCHRRRILHRDVK--PQNLLISEIVFTNL 403
D+K NLL++ + + L + GL+Y + +H++ K P+ I FT++
Sbjct: 177 DIKASNLLLNYKNPDQVYLVDY----GLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSI 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ EA+++++L + IV + I S + + L++Y++++ D + I L +
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL-VH 114
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
Q+ G+ Y +HRD+ +N+L+ + H ++ F L + L
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLL--VTQHYAKISDFGLSKAL 157
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 325 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 364 IRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ + QL+ + Y H + +++RDVKP+N LI
Sbjct: 107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 322 HHNIRLFMFQLLRG------LSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
H N+ LFM + S C + R L+ V+ +++ D + R ++++G+
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLC-KGRTLYSVVRDAKIVL---DVNKTRQIAQEIVKGM 143
Query: 376 SYCHRRRILHRDVKPQNLLI--SEIVFTNL 403
Y H + ILH+D+K +N+ ++V T+
Sbjct: 144 GYLHAKGILHKDLKSKNVFYDNGKVVITDF 173
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 272 REASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSG-GLDHHNIRLFMF 330
RE ++ +H N+V + L + + R + LD + R
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLL 355
++++G+ Y H + ILH+D+K +N+
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVF 162
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ +H + L T L FV EY + + R +
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 331 QLLRGLSYCH-RRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H + +++RD+K +NL++ + H I F
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 293
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 315 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 146 YSTSLDMWGVGCILIEMVTGLPTFPGVREVYDQLDKIFKILGTPTE 191
Y D+W +G L E+ TG +P V+DQL ++ K G P +
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQ 249
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ +H + L T L FV EY + + R +
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 331 QLLRGLSYCH-RRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H + +++RD+K +NL++ + H I F
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 296
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 318 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 353
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 96 QLGEGSYATVFKGYSNLTNQVVALK-EIRLQEEEGITLWYRPPDVLLGST 144
++GEGS+ +F+G + L NQ VA+K E R + + YR +L G T
Sbjct: 16 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT 65
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Q+L + H + +++RD+KP N LI + N +
Sbjct: 113 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANM 148
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/106 (18%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+REA ++ +L + IV L + + + + L +++ + N+ +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 443
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGLS 376
Q+ G+ Y + +HR++ +N+L+ ++ H ++ F L + L
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLL--VNRHYAKISDFGLSKALG 487
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 96 QLGEGSYATVFKGYSNLTNQVVALK-EIRLQEEEGITLWYRPPDVLLGST 144
++GEGS+ +F+G + L NQ VA+K E R + + YR +L G T
Sbjct: 17 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT 66
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRL 366
Q+L + H + +++RD+KP N LI + N +
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANM 149
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 91 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 144
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFLHE 167
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 82 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 139
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 91 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 144
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFLHE 167
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 82 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 139
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 312 YMERHSGGLDHHNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQL 371
Y + + L ++ + FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSE--KNVVKICDFGL 190
Query: 372 LRGL 375
R +
Sbjct: 191 ARDI 194
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 83 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 136
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 137 MDYLHAKSIIHRDLKSNNIFLHE 159
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 74 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 131
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 159
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ +H + L T L FV EY + + R +
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 117
Query: 331 QLLRGLSYCH-RRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H + +++RD+K +NL++ + H I F
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 155
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 177 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 322 HHNIRLFMF-----QLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMF--QLLRG 374
H NI LFM QL +C + H +L I E I+L Q +G
Sbjct: 90 HVNILLFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQG 143
Query: 375 LSYCHRRRILHRDVKPQNLLISE 397
+ Y H + I+HRD+K N+ + E
Sbjct: 144 MDYLHAKSIIHRDLKSNNIFLHE 166
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 273 EASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF-- 330
E +L++ +H NI+ T+ L V ++ S Y H I+L
Sbjct: 81 EVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGS-SLYHHLHIIETKFEMIKLIDIAR 138
Query: 331 QLLRGLSYCHRRRILHRDVKPQNLLISE 358
Q +G+ Y H + I+HRD+K N+ + E
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHE 166
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 328 FMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFMFQLLRGL 375
+ FQ+ +G+ + R+ +HRD+ +N+L+SE + +++ F L R +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSE--KNVVKIXDFGLARDI 194
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 367 FMFQLLRGLSYCHRRRILHRDVKPQNLLISE 397
+ FQ+ +G+ + R+ +HRD+ +N+L+SE
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 131 TLWYRPPDVLLGSTEYSTSLDMWGVGCILIEMVTGLPTFPGVRE 174
T Y P+ L G E + D++ G +L+E++TGLP RE
Sbjct: 189 TTAYXAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ +H + L T L FV EY + + R +
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 116
Query: 331 QLLRGLSYCH-RRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H + +++RD+K +NL++ + H I F
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 154
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 176 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 271 IREASLLKELKHNNIVTLHDIVHTRSTLTFVFEYVHTDLSQYMERHSGGLDHHNIRLFMF 330
+ E +L+ +H + L T L FV EY + + R +
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 115
Query: 331 QLLRGLSYCH-RRRILHRDVKPQNLLISEIDHHNIRLF 367
+++ L Y H + +++RD+K +NL++ + H I F
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 153
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 134 YRPPDVLLGSTEYSTSLDMWGVGCILIEMVTG-LPTF 169
Y P+VL +Y ++D WG+G ++ EM+ G LP +
Sbjct: 175 YLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 270 AIREASLLKELK-------HNNIVTLHDIVHTRSTLTFVFEYV-HTDLSQYMERHSGGLD 321
A + +L+ ELK H NIV L + + EY + DL ++ R S L+
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 322 H-------------HNIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLISEIDHHNIRLFM 368
++ F Q+ +G+++ + +HRDV +N+L++ + H ++
Sbjct: 150 TDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT--NGHVAKIGD 207
Query: 369 FQLLRGL 375
F L R +
Sbjct: 208 FGLARDI 214
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 324 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 357
+ + QL+ + Y H + +++RDVKP+N L+
Sbjct: 101 TVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVG 134
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 363 NIRLFMFQLLRGLSYCHRRRILHRDVKPQNLLIS 396
+ + QL+ + Y H + +++RDVKP+N L+
Sbjct: 101 TVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVG 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,612,671
Number of Sequences: 62578
Number of extensions: 622329
Number of successful extensions: 6192
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 1520
Number of HSP's gapped (non-prelim): 4148
length of query: 481
length of database: 14,973,337
effective HSP length: 103
effective length of query: 378
effective length of database: 8,527,803
effective search space: 3223509534
effective search space used: 3223509534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)