Query psy3087
Match_columns 192
No_of_seqs 254 out of 2194
Neff 9.7
Searched_HMMs 46136
Date Sat Aug 17 01:19:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3087.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3087hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4389|consensus 100.0 6.7E-29 1.5E-33 197.9 10.1 100 52-164 464-565 (601)
2 COG2272 PnbA Carboxylesterase 99.8 5.4E-21 1.2E-25 154.2 10.1 85 55-152 401-485 (491)
3 PF00135 COesterase: Carboxyle 99.8 6.3E-21 1.4E-25 160.4 6.5 82 55-152 454-535 (535)
4 cd00312 Esterase_lipase Estera 99.7 6.4E-17 1.4E-21 135.4 11.8 43 1-43 155-197 (493)
5 COG0657 Aes Esterase/lipase [L 99.3 7.3E-12 1.6E-16 99.1 7.4 99 2-108 132-237 (312)
6 KOG1516|consensus 99.1 4.3E-11 9.4E-16 101.5 3.9 59 2-60 175-233 (545)
7 PF07859 Abhydrolase_3: alpha/ 98.9 7.2E-10 1.6E-14 82.7 2.7 46 2-47 51-96 (211)
8 PRK10162 acetyl esterase; Prov 98.9 7.4E-09 1.6E-13 82.3 7.1 45 2-46 134-178 (318)
9 KOG1515|consensus 98.9 3.4E-09 7.5E-14 84.1 5.1 45 2-46 145-190 (336)
10 PF00326 Peptidase_S9: Prolyl 97.9 8.3E-06 1.8E-10 60.9 3.2 37 2-41 47-83 (213)
11 PF10340 DUF2424: Protein of u 97.6 0.00053 1.2E-08 55.3 8.4 39 2-45 180-218 (374)
12 KOG4388|consensus 97.1 0.00022 4.7E-09 60.0 1.4 47 2-48 449-495 (880)
13 TIGR01840 esterase_phb esteras 97.0 0.0013 2.9E-08 49.0 4.7 36 4-42 80-115 (212)
14 KOG4627|consensus 96.9 0.0013 2.8E-08 48.6 3.6 42 2-47 120-161 (270)
15 PLN00021 chlorophyllase 96.6 0.0032 7E-08 50.0 4.4 43 2-44 101-148 (313)
16 PF10503 Esterase_phd: Esteras 96.5 0.0048 1E-07 46.5 4.7 31 12-42 87-117 (220)
17 PF11187 DUF2974: Protein of u 96.4 0.0059 1.3E-07 46.2 4.8 38 3-43 68-105 (224)
18 PRK10566 esterase; Provisional 96.4 0.0046 1E-07 47.0 4.3 35 5-42 93-127 (249)
19 PF12740 Chlorophyllase2: Chlo 96.4 0.0039 8.4E-08 48.0 3.7 41 3-43 67-112 (259)
20 COG0400 Predicted esterase [Ge 96.1 0.014 2.9E-07 43.6 5.3 40 5-44 82-121 (207)
21 PRK11460 putative hydrolase; P 96.0 0.015 3.3E-07 44.1 5.1 35 8-42 89-123 (232)
22 PRK13604 luxD acyl transferase 96.0 0.012 2.7E-07 46.4 4.7 34 2-41 94-127 (307)
23 PF12695 Abhydrolase_5: Alpha/ 95.9 0.021 4.7E-07 39.2 5.1 23 20-42 59-81 (145)
24 COG0412 Dienelactone hydrolase 95.6 0.017 3.8E-07 44.0 4.1 39 2-43 95-133 (236)
25 KOG1516|consensus 95.6 0.024 5.1E-07 48.5 5.3 88 51-156 457-544 (545)
26 PRK10115 protease 2; Provision 95.5 0.018 3.8E-07 50.8 4.2 38 2-42 507-544 (686)
27 TIGR02821 fghA_ester_D S-formy 95.4 0.039 8.5E-07 42.9 5.4 27 17-43 133-159 (275)
28 PF02230 Abhydrolase_2: Phosph 95.3 0.041 8.9E-07 41.1 5.2 35 9-44 93-127 (216)
29 KOG2281|consensus 95.3 0.019 4.2E-07 49.2 3.7 39 2-42 709-747 (867)
30 COG3509 LpqC Poly(3-hydroxybut 95.2 0.041 8.8E-07 43.0 4.8 34 9-42 131-164 (312)
31 PF01764 Lipase_3: Lipase (cla 95.0 0.053 1.1E-06 37.4 4.8 37 7-45 51-87 (140)
32 COG1506 DAP2 Dipeptidyl aminop 95.0 0.026 5.6E-07 49.2 3.6 39 2-43 456-494 (620)
33 PF08840 BAAT_C: BAAT / Acyl-C 94.9 0.036 7.9E-07 41.5 3.9 37 4-43 7-43 (213)
34 cd00707 Pancreat_lipase_like P 94.9 0.05 1.1E-06 42.4 4.6 35 9-43 99-133 (275)
35 KOG2112|consensus 94.5 0.072 1.6E-06 39.4 4.3 41 3-43 74-114 (206)
36 PLN02753 triacylglycerol lipas 94.3 0.082 1.8E-06 44.6 4.8 40 6-45 293-335 (531)
37 PLN02719 triacylglycerol lipas 94.2 0.084 1.8E-06 44.4 4.7 41 6-46 279-322 (518)
38 PF05448 AXE1: Acetyl xylan es 94.2 0.032 6.9E-07 44.6 2.1 38 1-41 157-194 (320)
39 TIGR03101 hydr2_PEP hydrolase, 94.1 0.11 2.3E-06 40.5 4.9 35 2-42 85-119 (266)
40 PF01738 DLH: Dienelactone hyd 94.0 0.058 1.3E-06 40.3 3.1 39 2-43 81-119 (218)
41 PLN02408 phospholipase A1 93.8 0.11 2.4E-06 42.1 4.6 40 6-45 184-223 (365)
42 COG2945 Predicted hydrolase of 93.8 0.087 1.9E-06 38.7 3.6 38 2-43 87-124 (210)
43 cd00741 Lipase Lipase. Lipase 93.7 0.12 2.7E-06 36.3 4.2 25 20-44 26-50 (153)
44 PLN02442 S-formylglutathione h 93.7 0.14 3E-06 40.1 4.8 33 8-42 131-163 (283)
45 TIGR03695 menH_SHCHC 2-succiny 93.6 0.15 3.2E-06 37.7 4.9 37 4-42 53-90 (251)
46 KOG2100|consensus 93.6 0.076 1.6E-06 47.3 3.6 38 2-42 591-628 (755)
47 PLN02761 lipase class 3 family 93.4 0.16 3.4E-06 42.9 4.9 40 6-45 274-317 (527)
48 PRK10985 putative hydrolase; P 93.3 0.16 3.4E-06 40.5 4.7 35 2-41 116-150 (324)
49 KOG4409|consensus 93.2 0.091 2E-06 42.1 3.1 43 2-44 138-182 (365)
50 TIGR03100 hydr1_PEP hydrolase, 93.1 0.17 3.7E-06 39.3 4.5 37 2-42 84-120 (274)
51 PF11144 DUF2920: Protein of u 93.0 0.18 3.9E-06 41.3 4.5 40 1-41 164-203 (403)
52 PLN02454 triacylglycerol lipas 92.8 0.22 4.8E-06 41.0 4.9 41 6-46 212-252 (414)
53 PF07819 PGAP1: PGAP1-like pro 92.7 0.27 5.9E-06 37.2 5.0 38 6-43 69-106 (225)
54 PLN02298 hydrolase, alpha/beta 92.5 0.22 4.8E-06 39.6 4.5 38 2-42 117-154 (330)
55 PF07224 Chlorophyllase: Chlor 92.4 0.2 4.4E-06 38.7 3.9 41 3-43 96-141 (307)
56 COG1770 PtrB Protease II [Amin 92.2 0.2 4.3E-06 43.3 4.0 38 2-42 510-547 (682)
57 PF12715 Abhydrolase_7: Abhydr 92.1 0.089 1.9E-06 42.8 1.8 37 2-41 209-245 (390)
58 TIGR03230 lipo_lipase lipoprot 91.9 0.36 7.7E-06 40.3 5.1 26 17-42 114-139 (442)
59 PLN02802 triacylglycerol lipas 91.7 0.3 6.6E-06 41.1 4.5 38 8-45 316-353 (509)
60 PF06500 DUF1100: Alpha/beta h 91.6 0.16 3.4E-06 41.9 2.7 34 5-41 247-280 (411)
61 TIGR00976 /NonD putative hydro 91.5 0.36 7.9E-06 41.5 4.9 37 2-42 81-117 (550)
62 PRK05077 frsA fermentation/res 91.3 0.29 6.4E-06 40.5 4.1 35 5-42 251-285 (414)
63 PLN02571 triacylglycerol lipas 91.2 0.31 6.8E-06 40.2 4.1 41 7-47 211-251 (413)
64 PF08538 DUF1749: Protein of u 91.2 0.35 7.5E-06 38.2 4.2 40 2-44 89-130 (303)
65 KOG1552|consensus 91.2 0.31 6.7E-06 37.4 3.7 36 2-41 114-149 (258)
66 PF12697 Abhydrolase_6: Alpha/ 91.1 0.59 1.3E-05 33.8 5.2 32 9-42 55-86 (228)
67 PRK10673 acyl-CoA esterase; Pr 90.9 0.39 8.4E-06 36.3 4.2 32 9-42 70-101 (255)
68 PF00151 Lipase: Lipase; Inte 90.8 0.39 8.5E-06 38.6 4.3 30 16-45 144-173 (331)
69 PLN02324 triacylglycerol lipas 90.8 0.45 9.7E-06 39.2 4.6 34 10-43 203-236 (415)
70 PHA02857 monoglyceride lipase; 90.6 0.54 1.2E-05 36.2 4.8 22 21-42 96-117 (276)
71 TIGR02427 protocat_pcaD 3-oxoa 90.6 0.57 1.2E-05 34.6 4.8 33 8-42 67-99 (251)
72 PF00975 Thioesterase: Thioest 90.5 0.52 1.1E-05 35.1 4.5 25 23-47 67-91 (229)
73 TIGR01836 PHA_synth_III_C poly 90.4 0.49 1.1E-05 38.1 4.5 35 3-42 122-156 (350)
74 PF00561 Abhydrolase_1: alpha/ 90.2 0.76 1.6E-05 33.7 5.2 37 2-43 29-65 (230)
75 PLN02847 triacylglycerol lipas 90.2 0.39 8.4E-06 41.3 3.8 42 4-45 227-274 (633)
76 PLN02310 triacylglycerol lipas 90.0 0.56 1.2E-05 38.6 4.5 36 8-43 193-230 (405)
77 PLN02894 hydrolase, alpha/beta 89.9 0.59 1.3E-05 38.5 4.7 24 20-43 174-197 (402)
78 PLN02385 hydrolase; alpha/beta 89.6 0.62 1.3E-05 37.4 4.5 23 20-42 160-182 (349)
79 PF03283 PAE: Pectinacetyleste 89.5 0.57 1.2E-05 38.1 4.2 37 3-42 140-176 (361)
80 cd00519 Lipase_3 Lipase (class 89.4 0.84 1.8E-05 34.4 4.9 25 20-44 126-150 (229)
81 PRK11126 2-succinyl-6-hydroxy- 89.4 0.89 1.9E-05 34.0 5.0 37 5-43 51-87 (242)
82 PRK10439 enterobactin/ferric e 88.8 0.88 1.9E-05 37.7 4.9 34 8-42 275-308 (411)
83 TIGR03611 RutD pyrimidine util 88.7 1 2.3E-05 33.5 5.0 34 7-42 67-100 (257)
84 PLN02511 hydrolase 88.5 0.85 1.8E-05 37.4 4.6 37 2-43 158-194 (388)
85 PRK11071 esterase YqiA; Provis 88.4 1.1 2.4E-05 32.9 4.7 34 7-42 48-81 (190)
86 PF03959 FSH1: Serine hydrolas 88.3 0.86 1.9E-05 34.0 4.2 39 2-43 85-123 (212)
87 PLN03037 lipase class 3 family 88.2 0.87 1.9E-05 38.6 4.5 26 19-44 315-340 (525)
88 PF05677 DUF818: Chlamydia CHL 87.9 0.89 1.9E-05 36.5 4.2 36 2-39 197-232 (365)
89 PLN02824 hydrolase, alpha/beta 87.8 0.98 2.1E-05 35.1 4.4 30 12-43 94-123 (294)
90 PRK00870 haloalkane dehalogena 87.7 1.3 2.9E-05 34.6 5.2 35 6-42 101-135 (302)
91 PF10230 DUF2305: Uncharacteri 87.7 1.4 3.1E-05 34.2 5.2 39 5-43 67-105 (266)
92 PRK10749 lysophospholipase L2; 87.6 1.1 2.3E-05 35.8 4.6 23 20-42 129-151 (330)
93 COG3458 Acetyl esterase (deace 87.4 0.41 8.9E-06 37.2 2.0 40 2-44 159-199 (321)
94 PF09752 DUF2048: Uncharacteri 87.2 0.79 1.7E-05 36.9 3.6 35 2-42 161-195 (348)
95 COG1647 Esterase/lipase [Gener 86.8 4.7 0.0001 30.5 7.2 27 22-48 85-111 (243)
96 PRK03204 haloalkane dehalogena 86.6 1.4 2.9E-05 34.4 4.6 22 21-42 100-121 (286)
97 PLN00413 triacylglycerol lipas 86.6 1.4 3.1E-05 37.0 4.8 22 21-42 283-304 (479)
98 KOG2564|consensus 86.4 0.48 1E-05 37.0 1.9 26 17-42 141-166 (343)
99 PLN02652 hydrolase; alpha/beta 86.3 1.7 3.7E-05 35.8 5.2 21 22-42 208-228 (395)
100 TIGR01250 pro_imino_pep_2 prol 86.1 1.7 3.8E-05 32.8 5.0 22 21-42 95-116 (288)
101 PRK05371 x-prolyl-dipeptidyl a 86.0 1.2 2.6E-05 40.0 4.5 41 2-42 307-358 (767)
102 PLN02965 Probable pheophorbida 86.0 1.6 3.5E-05 33.2 4.7 35 7-42 58-92 (255)
103 PLN02872 triacylglycerol lipas 86.0 1.5 3.2E-05 36.2 4.7 34 2-41 146-179 (395)
104 PF03403 PAF-AH_p_II: Platelet 85.9 0.97 2.1E-05 37.0 3.6 23 19-41 225-247 (379)
105 COG3571 Predicted hydrolase of 85.1 1.3 2.8E-05 31.8 3.4 35 8-42 74-109 (213)
106 KOG4391|consensus 85.1 0.24 5.3E-06 37.2 -0.2 37 1-40 131-167 (300)
107 TIGR03056 bchO_mg_che_rel puta 85.1 1.6 3.5E-05 33.1 4.3 22 22-43 95-116 (278)
108 PF02129 Peptidase_S15: X-Pro 84.9 1.1 2.4E-05 34.6 3.4 36 2-41 85-120 (272)
109 TIGR01738 bioH putative pimelo 84.3 1.9 4.1E-05 31.6 4.3 21 22-42 65-85 (245)
110 PLN02211 methyl indole-3-aceta 84.0 2.5 5.4E-05 32.8 5.0 34 8-42 74-107 (273)
111 PF05728 UPF0227: Uncharacteri 83.7 3 6.4E-05 30.6 5.0 36 4-41 43-78 (187)
112 COG4099 Predicted peptidase [G 83.6 1.8 3.9E-05 34.3 3.9 37 5-41 251-288 (387)
113 TIGR02240 PHA_depoly_arom poly 83.5 2.2 4.7E-05 32.9 4.4 33 9-43 80-112 (276)
114 PF11288 DUF3089: Protein of u 83.3 3.1 6.8E-05 31.1 4.9 36 2-41 79-114 (207)
115 KOG4569|consensus 83.1 0.76 1.7E-05 37.0 1.8 28 21-48 170-197 (336)
116 COG2267 PldB Lysophospholipase 82.9 2.9 6.2E-05 33.1 4.9 39 5-44 91-129 (298)
117 PRK03592 haloalkane dehalogena 82.6 3.2 6.9E-05 32.2 5.1 34 8-43 81-114 (295)
118 PRK14875 acetoin dehydrogenase 82.1 2.9 6.4E-05 33.5 4.9 34 7-42 184-217 (371)
119 PF00756 Esterase: Putative es 81.6 1.1 2.5E-05 33.9 2.2 33 7-42 103-135 (251)
120 PLN02162 triacylglycerol lipas 81.4 3.5 7.5E-05 34.7 5.0 22 21-42 277-298 (475)
121 TIGR01249 pro_imino_pep_1 prol 81.1 3.6 7.9E-05 32.3 5.0 23 21-43 94-116 (306)
122 TIGR01392 homoserO_Ac_trn homo 80.7 4.1 8.8E-05 32.8 5.2 34 8-43 114-148 (351)
123 KOG3724|consensus 80.4 3.2 7E-05 37.1 4.6 40 5-44 161-204 (973)
124 TIGR01607 PST-A Plasmodium sub 79.6 2.7 5.9E-05 33.6 3.8 20 22-41 142-161 (332)
125 COG3208 GrsT Predicted thioest 78.9 12 0.00025 28.7 6.7 26 23-48 75-100 (244)
126 PRK10349 carboxylesterase BioH 78.7 4.1 8.9E-05 30.8 4.5 22 21-42 73-94 (256)
127 TIGR03343 biphenyl_bphD 2-hydr 78.7 3.4 7.4E-05 31.6 4.1 32 9-42 90-121 (282)
128 PLN02934 triacylglycerol lipas 78.7 4.1 8.8E-05 34.7 4.6 22 21-42 320-341 (515)
129 PF05057 DUF676: Putative seri 78.3 3.4 7.3E-05 31.0 3.8 38 7-44 63-100 (217)
130 KOG2237|consensus 78.3 2.2 4.8E-05 37.1 3.0 37 2-41 532-568 (712)
131 PRK08775 homoserine O-acetyltr 76.5 4.9 0.00011 32.2 4.5 34 9-43 126-159 (343)
132 PLN02578 hydrolase 74.3 7.3 0.00016 31.4 5.0 22 22-43 152-173 (354)
133 TIGR01838 PHA_synth_I poly(R)- 74.2 5.1 0.00011 34.5 4.2 31 3-38 248-278 (532)
134 PLN02679 hydrolase, alpha/beta 73.7 8 0.00017 31.3 5.1 31 9-41 144-174 (360)
135 COG0596 MhpC Predicted hydrola 73.1 5.9 0.00013 28.8 4.0 33 9-43 77-109 (282)
136 COG2819 Predicted hydrolase of 72.4 3.4 7.4E-05 32.0 2.4 26 17-42 132-157 (264)
137 PLN02733 phosphatidylcholine-s 71.1 8 0.00017 32.5 4.6 21 22-42 162-182 (440)
138 PF06821 Ser_hydrolase: Serine 70.2 7.2 0.00016 28.1 3.7 33 8-40 41-73 (171)
139 KOG1838|consensus 69.7 9.7 0.00021 31.6 4.6 37 2-43 183-219 (409)
140 KOG3101|consensus 69.0 1.5 3.2E-05 33.0 -0.1 25 16-40 135-159 (283)
141 PF06028 DUF915: Alpha/beta hy 68.8 12 0.00026 29.0 4.8 25 20-44 101-125 (255)
142 PRK06765 homoserine O-acetyltr 68.4 11 0.00025 31.0 4.9 32 10-43 150-182 (389)
143 PF03583 LIP: Secretory lipase 68.4 10 0.00023 29.8 4.5 38 3-40 51-89 (290)
144 KOG2183|consensus 67.0 10 0.00022 31.6 4.2 33 6-41 154-186 (492)
145 cd01826 acyloxyacyl_hydrolase_ 66.6 2.8 6.1E-05 33.2 0.9 15 20-34 10-24 (305)
146 PTZ00472 serine carboxypeptida 65.2 11 0.00023 32.0 4.2 23 21-43 170-192 (462)
147 COG0429 Predicted hydrolase of 65.1 14 0.00031 29.7 4.6 35 2-41 133-167 (345)
148 cd07224 Pat_like Patatin-like 64.9 14 0.00029 28.1 4.4 35 6-44 17-51 (233)
149 PRK00175 metX homoserine O-ace 64.7 17 0.00036 29.7 5.2 34 8-43 134-168 (379)
150 KOG2382|consensus 64.1 9.9 0.00021 30.3 3.6 23 20-42 121-144 (315)
151 PF08237 PE-PPE: PE-PPE domain 63.9 22 0.00047 27.0 5.3 35 7-41 33-67 (225)
152 PRK07581 hypothetical protein; 63.7 8.1 0.00018 30.8 3.1 23 21-43 122-145 (339)
153 COG4188 Predicted dienelactone 63.6 5.3 0.00012 32.5 2.0 39 3-41 136-178 (365)
154 PRK06489 hypothetical protein; 63.3 7.6 0.00016 31.3 2.9 23 21-43 152-175 (360)
155 KOG1553|consensus 62.7 12 0.00027 30.4 3.9 30 14-43 303-332 (517)
156 cd07218 Pat_iPLA2 Calcium-inde 62.2 12 0.00026 28.7 3.7 35 6-44 18-52 (245)
157 cd07205 Pat_PNPLA6_PNPLA7_NTE1 62.1 17 0.00036 26.0 4.3 33 5-43 17-49 (175)
158 COG3319 Thioesterase domains o 61.4 4.8 0.0001 31.2 1.4 25 23-47 66-90 (257)
159 PRK05855 short chain dehydroge 59.8 22 0.00047 30.4 5.3 35 7-42 80-114 (582)
160 cd07207 Pat_ExoU_VipD_like Exo 59.5 15 0.00032 26.7 3.7 32 6-43 17-48 (194)
161 cd07210 Pat_hypo_W_succinogene 59.1 17 0.00037 27.3 4.0 32 6-43 18-49 (221)
162 COG5153 CVT17 Putative lipase 58.6 7.3 0.00016 30.8 1.9 21 22-42 276-296 (425)
163 KOG4540|consensus 58.6 7.3 0.00016 30.8 1.9 21 22-42 276-296 (425)
164 COG4757 Predicted alpha/beta h 58.6 8.4 0.00018 29.5 2.2 38 1-43 89-126 (281)
165 PRK04940 hypothetical protein; 56.9 27 0.00059 25.5 4.6 38 5-42 41-80 (180)
166 PF09994 DUF2235: Uncharacteri 56.6 21 0.00045 27.9 4.2 41 3-47 77-117 (277)
167 KOG3847|consensus 54.7 4.4 9.6E-05 32.4 0.2 21 19-39 238-258 (399)
168 PLN03087 BODYGUARD 1 domain co 54.7 14 0.00031 31.4 3.2 22 21-42 273-294 (481)
169 PF01083 Cutinase: Cutinase; 53.5 42 0.00091 24.3 5.2 21 21-41 80-100 (179)
170 KOG3043|consensus 52.3 5.4 0.00012 30.3 0.3 49 2-58 105-153 (242)
171 KOG1454|consensus 51.8 28 0.00062 27.9 4.4 31 10-42 118-148 (326)
172 PF05116 S6PP: Sucrose-6F-phos 51.7 15 0.00032 28.2 2.7 24 5-31 168-191 (247)
173 cd07214 Pat17_isozyme_like Pat 51.1 29 0.00062 28.2 4.3 38 5-42 21-63 (349)
174 PLN02980 2-oxoglutarate decarb 50.6 32 0.0007 34.1 5.2 33 8-42 1433-1465(1655)
175 COG2939 Carboxypeptidase C (ca 50.5 22 0.00049 30.2 3.6 44 2-45 178-221 (498)
176 PF05577 Peptidase_S28: Serine 49.4 38 0.00083 28.1 5.0 23 20-42 111-133 (434)
177 COG3673 Uncharacterized conser 48.7 26 0.00055 28.3 3.5 41 4-48 108-148 (423)
178 cd07198 Patatin Patatin-like p 48.3 27 0.00057 24.9 3.4 34 5-44 15-48 (172)
179 TIGR01839 PHA_synth_II poly(R) 47.9 33 0.00072 29.8 4.3 31 3-38 274-304 (560)
180 PLN03084 alpha/beta hydrolase 47.5 42 0.00091 27.6 4.8 35 6-42 183-217 (383)
181 KOG1455|consensus 47.4 32 0.00068 27.4 3.8 20 23-42 130-149 (313)
182 PF14314 Methyltrans_Mon: Viru 47.2 29 0.00062 30.9 3.9 38 12-49 314-351 (675)
183 PF02450 LCAT: Lecithin:choles 47.1 34 0.00073 28.2 4.2 23 21-43 118-140 (389)
184 cd07228 Pat_NTE_like_bacteria 46.7 19 0.00042 25.8 2.5 32 6-43 18-49 (175)
185 TIGR03502 lipase_Pla1_cef extr 46.7 50 0.0011 30.1 5.4 24 20-43 553-576 (792)
186 PF06342 DUF1057: Alpha/beta h 45.4 35 0.00077 26.9 3.8 36 7-43 90-125 (297)
187 cd07216 Pat17_PNPLA8_PNPLA9_li 44.6 40 0.00087 26.7 4.2 17 25-41 45-61 (309)
188 cd07222 Pat_PNPLA4 Patatin-lik 43.5 34 0.00075 26.2 3.6 33 6-41 17-50 (246)
189 smart00824 PKS_TE Thioesterase 42.8 73 0.0016 22.6 5.1 23 21-43 63-85 (212)
190 PHA01735 hypothetical protein 42.7 20 0.00044 21.6 1.7 12 2-13 34-45 (76)
191 COG4814 Uncharacterized protei 42.2 63 0.0014 25.2 4.6 25 19-43 133-157 (288)
192 KOG2984|consensus 41.6 8.6 0.00019 28.9 -0.0 22 19-40 111-132 (277)
193 cd07215 Pat17_PNPLA8_PNPLA9_li 40.5 51 0.0011 26.4 4.2 36 5-40 17-58 (329)
194 PRK07868 acyl-CoA synthetase; 40.4 54 0.0012 30.7 4.9 20 22-41 141-160 (994)
195 PF06259 Abhydrolase_8: Alpha/ 40.3 81 0.0018 23.0 4.9 23 19-41 106-128 (177)
196 PLN02382 probable sucrose-phos 40.2 32 0.0007 28.6 3.1 28 5-32 178-205 (413)
197 PF03575 Peptidase_S51: Peptid 39.6 14 0.0003 26.0 0.8 13 24-36 70-82 (154)
198 cd07217 Pat17_PNPLA8_PNPLA9_li 39.2 65 0.0014 26.2 4.6 38 5-42 18-61 (344)
199 PF05990 DUF900: Alpha/beta hy 39.1 66 0.0014 24.4 4.5 22 20-41 91-112 (233)
200 cd07220 Pat_PNPLA2 Patatin-lik 39.0 45 0.00097 25.7 3.6 20 24-43 38-57 (249)
201 cd07208 Pat_hypo_Ecoli_yjju_li 38.9 31 0.00067 26.6 2.7 33 6-43 16-48 (266)
202 PF01734 Patatin: Patatin-like 38.7 28 0.0006 24.5 2.3 20 24-43 29-48 (204)
203 cd07213 Pat17_PNPLA8_PNPLA9_li 38.4 28 0.00061 27.3 2.4 19 25-43 37-55 (288)
204 cd07230 Pat_TGL4-5_like Triacy 37.9 50 0.0011 27.6 3.9 24 18-43 99-122 (421)
205 cd07204 Pat_PNPLA_like Patatin 37.6 50 0.0011 25.2 3.6 20 24-43 33-52 (243)
206 COG3340 PepE Peptidase E [Amin 36.9 8 0.00017 29.1 -0.8 15 23-37 118-132 (224)
207 KOG3975|consensus 36.9 48 0.001 25.8 3.3 33 6-42 98-130 (301)
208 KOG2551|consensus 36.9 49 0.0011 25.1 3.3 34 5-41 90-123 (230)
209 PF12242 Eno-Rase_NADH_b: NAD( 35.7 96 0.0021 19.3 3.9 35 5-41 25-59 (78)
210 cd07212 Pat_PNPLA9 Patatin-lik 35.1 33 0.00071 27.4 2.3 18 25-42 35-52 (312)
211 cd07211 Pat_PNPLA8 Patatin-lik 34.8 33 0.00071 27.1 2.3 17 25-41 44-60 (308)
212 TIGR01544 HAD-SF-IE haloacid d 34.8 45 0.00097 26.2 3.0 22 15-36 203-226 (277)
213 PLN02213 sinapoylglucose-malat 34.2 59 0.0013 25.9 3.7 37 4-42 35-71 (319)
214 COG2382 Fes Enterochelin ester 34.2 32 0.00069 27.3 2.0 25 19-43 174-198 (299)
215 cd07232 Pat_PLPL Patain-like p 33.7 37 0.0008 28.3 2.5 19 25-43 98-116 (407)
216 cd07209 Pat_hypo_Ecoli_Z1214_l 33.0 41 0.00089 25.1 2.5 32 6-43 16-47 (215)
217 cd07199 Pat17_PNPLA8_PNPLA9_li 32.5 37 0.00081 26.0 2.2 18 25-42 37-54 (258)
218 PF13242 Hydrolase_like: HAD-h 31.4 41 0.00089 20.2 1.9 24 14-37 14-38 (75)
219 TIGR01485 SPP_plant-cyano sucr 31.1 61 0.0013 24.6 3.2 26 5-33 170-195 (249)
220 cd01819 Patatin_and_cPLA2 Pata 30.6 50 0.0011 23.2 2.5 19 22-40 28-46 (155)
221 COG3730 SrlA Phosphotransferas 30.0 16 0.00034 25.8 -0.2 18 171-188 88-106 (176)
222 PRK05282 (alpha)-aspartyl dipe 30.0 35 0.00076 26.0 1.7 18 23-40 113-130 (233)
223 PF00450 Peptidase_S10: Serine 30.0 94 0.002 25.3 4.3 23 20-42 134-156 (415)
224 cd07229 Pat_TGL3_like Triacylg 29.9 41 0.00088 27.9 2.1 24 18-43 109-132 (391)
225 cd07227 Pat_Fungal_NTE1 Fungal 29.7 50 0.0011 25.8 2.5 20 24-43 40-59 (269)
226 cd07225 Pat_PNPLA6_PNPLA7 Pata 29.6 49 0.0011 26.3 2.5 31 6-42 33-63 (306)
227 COG0627 Predicted esterase [Ge 29.3 39 0.00085 27.1 1.9 22 22-43 152-173 (316)
228 PF11339 DUF3141: Protein of u 29.0 1.4E+02 0.003 25.9 5.1 41 2-42 120-160 (581)
229 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.9 50 0.0011 26.3 2.4 19 25-43 100-118 (298)
230 PRK10279 hypothetical protein; 28.0 54 0.0012 26.0 2.5 31 6-42 23-53 (300)
231 PRK10513 sugar phosphate phosp 27.8 41 0.0009 25.7 1.8 27 5-34 199-225 (270)
232 COG4782 Uncharacterized protei 27.5 1E+02 0.0022 25.3 3.9 33 5-42 179-211 (377)
233 cd07231 Pat_SDP1-like Sugar-De 27.5 57 0.0012 26.2 2.5 18 25-42 99-116 (323)
234 COG3545 Predicted esterase of 27.0 1.1E+02 0.0024 22.4 3.6 34 8-41 45-78 (181)
235 COG1075 LipA Predicted acetylt 27.0 98 0.0021 24.9 3.8 20 22-41 127-146 (336)
236 cd03366 TOPRIM_TopoIIA_GyrB TO 26.6 28 0.00061 23.4 0.6 12 24-35 4-15 (114)
237 PRK10252 entF enterobactin syn 26.6 1.3E+02 0.0028 28.9 5.0 22 22-43 1133-1154(1296)
238 COG3150 Predicted esterase [Ge 26.5 1.7E+02 0.0036 21.5 4.4 38 3-42 42-79 (191)
239 PF08282 Hydrolase_3: haloacid 25.9 76 0.0016 23.4 2.9 27 5-34 189-215 (254)
240 cd01030 TOPRIM_TopoIIA_like TO 25.9 42 0.00092 22.6 1.3 15 24-38 4-18 (115)
241 cd07221 Pat_PNPLA3 Patatin-lik 25.8 64 0.0014 24.9 2.5 20 24-43 34-53 (252)
242 COG0328 RnhA Ribonuclease HI [ 25.4 88 0.0019 22.3 2.9 25 3-33 51-75 (154)
243 TIGR03607 patatin-related prot 25.2 59 0.0013 29.4 2.4 19 25-43 69-87 (739)
244 TIGR02471 sucr_syn_bact_C sucr 25.1 55 0.0012 24.5 2.0 27 5-34 162-188 (236)
245 smart00827 PKS_AT Acyl transfe 24.9 1.7E+02 0.0038 22.6 4.9 26 14-41 76-101 (298)
246 PRK10976 putative hydrolase; P 24.7 51 0.0011 25.1 1.8 26 5-33 193-218 (266)
247 PF02402 Lysis_col: Lysis prot 24.7 31 0.00068 18.8 0.4 6 185-190 32-37 (46)
248 cd03365 TOPRIM_TopoIIA TOPRIM_ 24.6 52 0.0011 22.3 1.5 16 24-39 4-19 (120)
249 PRK15126 thiamin pyrimidine py 24.4 52 0.0011 25.3 1.8 26 5-33 191-216 (272)
250 PF12980 DUF3864: Domain of Un 24.4 52 0.0011 19.9 1.3 42 119-160 40-81 (82)
251 cd03145 GAT1_cyanophycinase Ty 24.3 52 0.0011 24.6 1.7 18 22-39 116-133 (217)
252 PRK01158 phosphoglycolate phos 23.4 56 0.0012 24.2 1.7 29 5-36 160-188 (230)
253 PF00432 Prenyltrans: Prenyltr 23.0 89 0.0019 16.6 2.1 23 1-23 1-26 (44)
254 KOG4667|consensus 23.0 1.1E+02 0.0025 23.3 3.2 22 21-42 102-125 (269)
255 COG3243 PhaC Poly(3-hydroxyalk 22.9 1.1E+02 0.0023 25.8 3.2 22 21-42 180-201 (445)
256 COG1752 RssA Predicted esteras 22.9 1.3E+02 0.0028 23.8 3.7 23 23-45 40-62 (306)
257 PF11312 DUF3115: Protein of u 22.8 1.8E+02 0.0039 23.4 4.4 21 22-42 88-108 (315)
258 TIGR01449 PGP_bact 2-phosphogl 22.7 98 0.0021 22.5 2.9 28 12-39 149-176 (213)
259 cd03129 GAT1_Peptidase_E_like 22.3 64 0.0014 23.8 1.8 18 22-39 113-130 (210)
260 COG0466 Lon ATP-dependent Lon 22.2 1.8E+02 0.0039 26.4 4.6 39 3-41 640-692 (782)
261 TIGR00128 fabD malonyl CoA-acy 22.0 1.3E+02 0.0029 23.1 3.7 25 14-40 76-101 (290)
262 PRK03669 mannosyl-3-phosphogly 21.9 82 0.0018 24.2 2.4 26 5-33 190-218 (271)
263 TIGR01487 SPP-like sucrose-pho 21.8 64 0.0014 23.7 1.8 30 5-37 150-179 (215)
264 PF01674 Lipase_2: Lipase (cla 21.8 1.8E+02 0.0039 21.9 4.2 19 23-41 76-94 (219)
265 cd07219 Pat_PNPLA1 Patatin-lik 21.8 83 0.0018 26.0 2.5 19 24-42 46-64 (382)
266 PRK10787 DNA-binding ATP-depen 21.6 1.1E+02 0.0024 28.0 3.4 43 3-45 638-694 (784)
267 KOG4178|consensus 21.5 1.2E+02 0.0026 24.5 3.2 25 21-45 112-136 (322)
268 PF15225 IL32: Interleukin 32 21.2 51 0.0011 21.0 0.9 27 159-185 17-43 (104)
269 COG0561 Cof Predicted hydrolas 20.9 67 0.0014 24.5 1.8 25 5-32 192-216 (264)
270 TIGR02069 cyanophycinase cyano 20.9 59 0.0013 25.1 1.4 15 24-38 117-131 (250)
271 PLN03016 sinapoylglucose-malat 20.7 1.1E+02 0.0024 25.8 3.0 22 21-42 164-185 (433)
No 1
>KOG4389|consensus
Probab=99.96 E-value=6.7e-29 Score=197.92 Aligned_cols=100 Identities=29% Similarity=0.700 Sum_probs=86.8
Q ss_pred cCccccCCCceeccccccCCCCCCCCCCCchhhHHHHHHHHHHHhchhcCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q psy3087 52 TGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWDTYDSINQLY 131 (192)
Q Consensus 52 ~g~~hg~el~yvf~~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Fa~~g~P~~~~~~~~~~~~~~~~~Wp~y~~~~~~~ 131 (192)
+|++||.|+-|+||.|.. ...+|+.+++.+++.+|+||+|||++|+|+... ...+.||+|+..+++|
T Consensus 464 mGVmHGYEIEyvFG~PL~-----~s~nYt~~E~~ls~rim~~WanFAktG~P~~~~--------~~~~~WP~yn~~~~~y 530 (601)
T KOG4389|consen 464 MGVMHGYEIEYVFGIPLN-----YSRNYTKEEKILSRRIMRYWANFAKTGDPNERG--------NPKPQWPPYNKTEQKY 530 (601)
T ss_pred hcCcccceEEEEeccccc-----ccccccHHHHHHHHHHHHHHHHHhhcCCCccCC--------CCccCCCCCCccccEE
Confidence 666899999999999986 557889999999999999999999999999752 1236899999999999
Q ss_pred eEeCCc--chhhhccccchhchHHHHHHhhccCCC
Q psy3087 132 LELGSK--TEIRNHYRGHKMSLWLNLIPQLHRPGV 164 (192)
Q Consensus 132 l~i~~~--~~~~~~~~~~~~~fw~~~~p~l~~~~~ 164 (192)
|.++.. ..+..+++..+|+||++.+|++.....
T Consensus 531 m~l~t~s~~ri~~~~~~~~C~fW~~~lpk~~~~ta 565 (601)
T KOG4389|consen 531 MNLDTGSLLRIIRGLRAQECAFWNRFLPKVLEATA 565 (601)
T ss_pred EEeccCcchhhcccchhhhhhHHHhhhhHHHHhhc
Confidence 999964 478889999999999999999986444
No 2
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.85 E-value=5.4e-21 Score=154.19 Aligned_cols=85 Identities=27% Similarity=0.462 Sum_probs=62.8
Q ss_pred cccCCCceeccccccCCCCCCCCCCCchhhHHHHHHHHHHHhchhcCCCCCCCCCCCCCCCCCCCCccccccCCccceEe
Q psy3087 55 VRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWDTYDSINQLYLEL 134 (192)
Q Consensus 55 ~hg~el~yvf~~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Fa~~g~P~~~~~~~~~~~~~~~~~Wp~y~~~~~~~l~i 134 (192)
.|+.|+.++|+.+.... ...........+++.|..+|.||+++|+|+.. ..+.||.|+.+.+++|.+
T Consensus 401 ~H~~El~~Vfg~~~~~~---~~~~~~~~~~~~s~~~~~~w~nFArtg~p~~~----------~~~~Wp~yt~e~r~~l~~ 467 (491)
T COG2272 401 PHATELSLVFGNLVALG---SAAQTARATAKLSRQMQDAWANFARTGSPNGL----------GLPDWPAYTEERRATLVL 467 (491)
T ss_pred ccccceeeeeccccccc---cccccchHHHHHHHHHHHHHHHHHhcCCCCCC----------CCCCCCCccccCceEEEe
Confidence 57788888888776211 11222334568999999999999999999965 336699999999999999
Q ss_pred CCcchhhhccccchhchH
Q psy3087 135 GSKTEIRNHYRGHKMSLW 152 (192)
Q Consensus 135 ~~~~~~~~~~~~~~~~fw 152 (192)
+...++..+++.+.-..|
T Consensus 468 d~~~kv~~Dp~~~~r~~~ 485 (491)
T COG2272 468 DPEIKVENDPRRDRREAW 485 (491)
T ss_pred cccceeccChhHhHHhhh
Confidence 997777777765444444
No 3
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.83 E-value=6.3e-21 Score=160.44 Aligned_cols=82 Identities=35% Similarity=0.738 Sum_probs=60.0
Q ss_pred cccCCCceeccccccCCCCCCCCCCCchhhHHHHHHHHHHHhchhcCCCCCCCCCCCCCCCCCCCCccccccCCccceEe
Q psy3087 55 VRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWDTYDSINQLYLEL 134 (192)
Q Consensus 55 ~hg~el~yvf~~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Fa~~g~P~~~~~~~~~~~~~~~~~Wp~y~~~~~~~l~i 134 (192)
+|++|++|+|+.+.... ...+..+..+++.|+.+|++|+++|+|+... ...+.||+|+.. |+.+
T Consensus 454 ~H~~Dl~ylFg~~~~~~-----~~~~~~~~~ls~~m~~~w~nFak~G~P~~~~--------~~~~~Wp~y~~~---~~~~ 517 (535)
T PF00135_consen 454 CHGDDLPYLFGNPFLSP-----PNPTEDDRKLSDQMQRYWTNFAKTGNPNNPS--------SGPPEWPPYDPE---YLNI 517 (535)
T ss_dssp BTTTTHHHHTTGCCHCH-----HHTCHHHHHHHHHHHHHHHHHHHHSSTSCTT--------TTSSTSTTBSTT---EEEE
T ss_pred cchhhhhhhcCCCcccc-----cccccHHHHHHHHHHHHHHhcCCCCCCCCCC--------CCCCCCCCCCch---hhhc
Confidence 44555555555554311 0114466778899999999999999993221 245789999986 7888
Q ss_pred CCcchhhhccccchhchH
Q psy3087 135 GSKTEIRNHYRGHKMSLW 152 (192)
Q Consensus 135 ~~~~~~~~~~~~~~~~fw 152 (192)
.....+...+++++|+||
T Consensus 518 ~~~~~~~~~~~~~~c~FW 535 (535)
T PF00135_consen 518 MLFPIDRNNYREADCDFW 535 (535)
T ss_dssp SSSEEEEESTTHHHHHHH
T ss_pred cCcccccccchhhcCcCC
Confidence 888888899999999999
No 4
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.72 E-value=6.4e-17 Score=135.35 Aligned_cols=43 Identities=42% Similarity=0.875 Sum_probs=40.2
Q ss_pred ChHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 1 ~D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.|+.+||+||++||+.||||+++|+|+|+||||+++..+++.+
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~ 197 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSP 197 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCc
Confidence 3899999999999999999999999999999999999887754
No 5
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.30 E-value=7.3e-12 Score=99.11 Aligned_cols=99 Identities=30% Similarity=0.362 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCCccccCccccCCCceeccccccCCCC------CC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDVPYVLGLPLVDGGP------FF 75 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~~~~~g~~hg~el~yvf~~p~~~~~~------~~ 75 (192)
|+.+|++|+.+|+++||+|+++|+|+||||||||++.+++..++++... ....++.+|..+... ..
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~--------p~~~~li~P~~d~~~~~~~~~~~ 203 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPL--------PAAQVLISPLLDLTSSAASLPGY 203 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCC--------ceEEEEEecccCCcccccchhhc
Confidence 8899999999999999999999999999999999999999877653210 011344455544332 11
Q ss_pred CCCCCchhhHHH-HHHHHHHHhchhcCCCCCCCC
Q psy3087 76 PHNYSDQDAAIS-KQLIHYIANFARKGDPNGPTP 108 (192)
Q Consensus 76 ~~~~~~~~~~ls-~~~~~~~~~Fa~~g~P~~~~~ 108 (192)
..........+. +++..|..+.....+|..++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl 237 (312)
T COG0657 204 GEADLLDAAAILAWFADLYLGAAPDREDPEASPL 237 (312)
T ss_pred CCccccCHHHHHHHHHHHhCcCccccCCCccCcc
Confidence 122222333444 555666555555566666654
No 6
>KOG1516|consensus
Probab=99.12 E-value=4.3e-11 Score=101.53 Aligned_cols=59 Identities=37% Similarity=0.786 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCCccccCccccCCC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDV 60 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~~~~~g~~hg~el 60 (192)
|+++||+||++||+.||||+++|+|+|+||||.++.++.+++..+++|.+.+...|..+
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 89999999999999999999999999999999999999999999999988887777654
No 7
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.90 E-value=7.2e-10 Score=82.65 Aligned_cols=46 Identities=41% Similarity=0.706 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
|+.+|++|+.+|+.++++|+++|+|+|+||||+|++.+++...+.+
T Consensus 51 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~ 96 (211)
T PF07859_consen 51 DVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG 96 (211)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred ccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc
Confidence 8999999999999999999999999999999999999998766554
No 8
>PRK10162 acetyl esterase; Provisional
Probab=98.85 E-value=7.4e-09 Score=82.28 Aligned_cols=45 Identities=29% Similarity=0.374 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccccc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAK 46 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~ 46 (192)
||.++++|+.++++++|+|++||+|+|+||||+|++.+++..++.
T Consensus 134 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 134 EIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999999999999998766544
No 9
>KOG1515|consensus
Probab=98.85 E-value=3.4e-09 Score=84.08 Aligned_cols=45 Identities=33% Similarity=0.615 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHh-hhhhCCCCCcEEEEEcChHHHHHHHHhhccccc
Q psy3087 2 DIVAALHWLREN-LHAFGGDPDRITLMGHGTGASLANILAVSPVAK 46 (192)
Q Consensus 2 D~~~al~wi~~~-~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~ 46 (192)
|+++|+.|+.++ ...++.|++||+|+|||||||+|..+++...+.
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~ 190 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADE 190 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhc
Confidence 899999999999 889999999999999999999999999876654
No 10
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.92 E-value=8.3e-06 Score=60.89 Aligned_cols=37 Identities=46% Similarity=0.664 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+.++++|+.++. .+|++||.|+|+|+||+++.+++.
T Consensus 47 D~~~~i~~l~~~~---~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 47 DVVAAIEYLIKQY---YIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHHHHTT---SEEEEEEEEEEETHHHHHHHHHHH
T ss_pred hHHHHHHHHhccc---cccceeEEEEcccccccccchhhc
Confidence 7888888887665 689999999999999999998887
No 11
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.55 E-value=0.00053 Score=55.30 Aligned_cols=39 Identities=31% Similarity=0.394 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
|++++.+++-+. . | ..+|.++||||||||+..++...+.
T Consensus 180 qlv~~Y~~Lv~~---~-G-~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 180 QLVATYDYLVES---E-G-NKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHHHHHHHHhc---c-C-CCeEEEEecCccHHHHHHHHHHHhh
Confidence 345555555532 1 3 4789999999999999988776543
No 12
>KOG4388|consensus
Probab=97.09 E-value=0.00022 Score=59.96 Aligned_cols=47 Identities=28% Similarity=0.496 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGK 48 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~ 48 (192)
+|.-|..|+-.|.+-.|-..+||++.||||||||+..+++.....+.
T Consensus 449 Ev~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gv 495 (880)
T KOG4388|consen 449 EVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGV 495 (880)
T ss_pred HHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCC
Confidence 45678999999999999999999999999999999988887654443
No 13
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.97 E-value=0.0013 Score=49.02 Aligned_cols=36 Identities=17% Similarity=0.449 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 4 VAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 4 ~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
...++++.+ ++++|++||+|+|+|+||.++..++..
T Consensus 80 ~~~i~~~~~---~~~id~~~i~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 80 HQLIDAVKA---NYSIDPNRVYVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred HHHHHHHHH---hcCcChhheEEEEECHHHHHHHHHHHh
Confidence 344555544 578999999999999999999888765
No 14
>KOG4627|consensus
Probab=96.86 E-value=0.0013 Score=48.59 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
|...-++||-+.-+ +..+|+++||||||||++......++..
T Consensus 120 ~~~~gv~filk~~~----n~k~l~~gGHSaGAHLa~qav~R~r~pr 161 (270)
T KOG4627|consen 120 QFTHGVNFILKYTE----NTKVLTFGGHSAGAHLAAQAVMRQRSPR 161 (270)
T ss_pred HHHHHHHHHHHhcc----cceeEEEcccchHHHHHHHHHHHhcCch
Confidence 34556677766543 5567999999999999998887766543
No 15
>PLN00021 chlorophyllase
Probab=96.59 E-value=0.0032 Score=50.05 Aligned_cols=43 Identities=33% Similarity=0.542 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHhhhh-----hCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 2 DIVAALHWLRENLHA-----FGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 2 D~~~al~wi~~~~~~-----~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
|+.+++.|+.+.... ...|.+++.|+|||.||.++..++....
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 456778999976543 3467899999999999999998887543
No 16
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.51 E-value=0.0048 Score=46.49 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=26.5
Q ss_pred HhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 12 ENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 12 ~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+-+.++.+|++||.+.|.|+||.++..++..
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~ 117 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACA 117 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHh
Confidence 3345789999999999999999999988764
No 17
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.44 E-value=0.0059 Score=46.19 Aligned_cols=38 Identities=29% Similarity=0.475 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+..|+.++.+-+..+.+ +|.|.|||-||+||..++...
T Consensus 68 q~~A~~yl~~~~~~~~~---~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYPG---KIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHHHHHHHhCCC---CEEEEEechhhHHHHHHHHHc
Confidence 45788999988887655 599999999999999888764
No 18
>PRK10566 esterase; Provisional
Probab=96.43 E-value=0.0046 Score=46.98 Aligned_cols=35 Identities=20% Similarity=0.045 Sum_probs=25.8
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+++.|+.+. ...|++||.|+|+|.||.+++.++..
T Consensus 93 ~~~~~l~~~---~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 93 TLRAAIREE---GWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHHHHHHhc---CCcCccceeEEeecccHHHHHHHHHh
Confidence 344555432 23688999999999999999977653
No 19
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.42 E-value=0.0039 Score=47.98 Aligned_cols=41 Identities=24% Similarity=0.480 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhhhh-----CCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 3 IVAALHWLRENLHAF-----GGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 3 ~~~al~wi~~~~~~~-----g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..+.++|+.++.... ..|.+||.|+|||.||.+|..+++..
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 456789998876554 35889999999999999998887764
No 20
>COG0400 Predicted esterase [General function prediction only]
Probab=96.15 E-value=0.014 Score=43.65 Aligned_cols=40 Identities=30% Similarity=0.448 Sum_probs=34.3
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
.-...|...+.+.|+|.+||++.|+|=||++++.+.+...
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~ 121 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLP 121 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCc
Confidence 3446778888999999999999999999999998887644
No 21
>PRK11460 putative hydrolase; Provisional
Probab=96.01 E-value=0.015 Score=44.14 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=28.4
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+++.....+.+.+++||+++|+|.||.+++.++..
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHh
Confidence 45555556778899999999999999999887754
No 22
>PRK13604 luxD acyl transferase; Provisional
Probab=96.00 E-value=0.012 Score=46.43 Aligned_cols=34 Identities=15% Similarity=0.356 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+.+|+.|++++ +.++|.|.|+|.||..+.+++.
T Consensus 94 Dl~aaid~lk~~------~~~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 94 SLLTVVDWLNTR------GINNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred HHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHhc
Confidence 889999999875 3467999999999999866554
No 23
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.88 E-value=0.021 Score=39.22 Aligned_cols=23 Identities=52% Similarity=0.878 Sum_probs=21.0
Q ss_pred CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+++|.++|+|+||.++..++..
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~ 81 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAAR 81 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHH
T ss_pred CCCcEEEEEEccCcHHHHHHhhh
Confidence 99999999999999999987764
No 24
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.63 E-value=0.017 Score=44.01 Aligned_cols=39 Identities=38% Similarity=0.530 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|+.+++.|++++.. +++.+|.++|+|.||.+++.++...
T Consensus 95 d~~a~~~~L~~~~~---~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 95 DIDAALDYLARQPQ---VDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHhCCC---CCCceEEEEEEcccHHHHHHhhccc
Confidence 67788888887754 7999999999999999999888764
No 25
>KOG1516|consensus
Probab=95.63 E-value=0.024 Score=48.50 Aligned_cols=88 Identities=23% Similarity=0.507 Sum_probs=56.3
Q ss_pred ccCccccCCCceeccccccCCCCCCCCCCCchhhHHHHHHHHHHHhchhcCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q psy3087 51 RTGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWDTYDSINQL 130 (192)
Q Consensus 51 ~~g~~hg~el~yvf~~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Fa~~g~P~~~~~~~~~~~~~~~~~Wp~y~~~~~~ 130 (192)
..+..|++++.|+|+.+.... .......+..+ ..+|.+|+++|+|+.... ....|++ .....
T Consensus 457 ~~~~~h~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~fa~~g~p~~~~~--------~~~~~~~--~~~~~ 518 (545)
T KOG1516|consen 457 DTGVEHADDLRYLFGENFLKR----PVMKSSFEKKL----IELWTNFAKTGNPNGTDL--------GTDKWEP--KVPRK 518 (545)
T ss_pred ccCCcccccceeecccccccc----CCCCChHHHHH----HHHHHHHHhhCCCCCCCC--------CCCCCCc--ccccc
Confidence 457889999999988765421 11112223333 999999999999997532 2346877 22222
Q ss_pred ceEeCCcchhhhccccchhchHHHHH
Q psy3087 131 YLELGSKTEIRNHYRGHKMSLWLNLI 156 (192)
Q Consensus 131 ~l~i~~~~~~~~~~~~~~~~fw~~~~ 156 (192)
+..+.....+...+...+..+|..+.
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (545)
T KOG1516|consen 519 LLIISKLPEMLDPFQDGRLKIWDRLF 544 (545)
T ss_pred ccccCchHHhhhhhhhhhhhhhhhhc
Confidence 33334455666677788888887654
No 26
>PRK10115 protease 2; Provisional
Probab=95.50 E-value=0.018 Score=50.77 Aligned_cols=38 Identities=24% Similarity=0.172 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+++|++|+.++. -.|++||+|+|.|+||.|+..+...
T Consensus 507 D~~a~~~~Lv~~g---~~d~~rl~i~G~S~GG~l~~~~~~~ 544 (686)
T PRK10115 507 DYLDACDALLKLG---YGSPSLCYGMGGSAGGMLMGVAINQ 544 (686)
T ss_pred HHHHHHHHHHHcC---CCChHHeEEEEECHHHHHHHHHHhc
Confidence 8899999998663 3699999999999999999876653
No 27
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=95.39 E-value=0.039 Score=42.90 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=24.1
Q ss_pred hCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 17 FGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 17 ~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
++.|.++++|+|+|+||.+++.+++..
T Consensus 133 ~~~~~~~~~~~G~S~GG~~a~~~a~~~ 159 (275)
T TIGR02821 133 FPLDGERQGITGHSMGGHGALVIALKN 159 (275)
T ss_pred CCCCCCceEEEEEChhHHHHHHHHHhC
Confidence 678999999999999999999888753
No 28
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=95.34 E-value=0.041 Score=41.14 Aligned_cols=35 Identities=40% Similarity=0.563 Sum_probs=25.8
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
+|.+.. +.+++++||+++|+|-||.++..+++...
T Consensus 93 li~~~~-~~~i~~~ri~l~GFSQGa~~al~~~l~~p 127 (216)
T PF02230_consen 93 LIDEEV-AYGIDPSRIFLGGFSQGAAMALYLALRYP 127 (216)
T ss_dssp HHHHHH-HTT--GGGEEEEEETHHHHHHHHHHHCTS
T ss_pred HHHHHH-HcCCChhheehhhhhhHHHHHHHHHHHcC
Confidence 444333 34799999999999999999999888643
No 29
>KOG2281|consensus
Probab=95.34 E-value=0.019 Score=49.21 Aligned_cols=39 Identities=28% Similarity=0.251 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|++++|+|+.++.. -+|++||.|-|+|-||.|+++....
T Consensus 709 DQVeglq~Laeq~g--fidmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 709 DQVEGLQMLAEQTG--FIDMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred hhHHHHHHHHHhcC--cccchheeEeccccccHHHHHHhhc
Confidence 88999999999876 4899999999999999999877654
No 30
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.20 E-value=0.041 Score=43.01 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=28.7
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-|.+-+.+|++|+.||+|.|-|+||.++..++..
T Consensus 131 lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 131 LVAKLVNEYGIDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred HHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhc
Confidence 3445567899999999999999999999887765
No 31
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.05 E-value=0.053 Score=37.36 Aligned_cols=37 Identities=27% Similarity=0.421 Sum_probs=27.2
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
...+++-.++.. ..+|.+.|||.||.+|.+++.....
T Consensus 51 ~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 51 LDALKELVEKYP--DYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhh
Confidence 455555444433 4899999999999999998876543
No 32
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.98 E-value=0.026 Score=49.16 Aligned_cols=39 Identities=28% Similarity=0.365 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|+.++++|+.+.. ..|++||+|+|+|-||.++++.+...
T Consensus 456 D~~~~~~~l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 456 DLIAAVDALVKLP---LVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHHHHHHHHHhCC---CcChHHeEEeccChHHHHHHHHHhcC
Confidence 7888888886654 47999999999999999999877653
No 33
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=94.92 E-value=0.036 Score=41.53 Aligned_cols=37 Identities=38% Similarity=0.635 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 4 VAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 4 ~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..|++|++++-. .+.++|.|+|.|-||-+|..++...
T Consensus 7 e~Ai~~L~~~p~---v~~~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 7 EEAIDWLKSHPE---VDPDKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp HHHHHHHHCSTT---B--SSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCC---CCCCCEEEEEECHHHHHHHHHHhcC
Confidence 469999999854 5789999999999999999887653
No 34
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.86 E-value=0.05 Score=42.45 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=26.4
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+|..-....+.+.++|.++|+|.||++|..++...
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh
Confidence 33333344467889999999999999999887654
No 35
>KOG2112|consensus
Probab=94.48 E-value=0.072 Score=39.44 Aligned_cols=41 Identities=27% Similarity=0.244 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+.+.+.|+-++-...|++++||.++|.|-||.++...++..
T Consensus 74 aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~ 114 (206)
T KOG2112|consen 74 AADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY 114 (206)
T ss_pred HHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc
Confidence 35677888888888899999999999999999999888765
No 36
>PLN02753 triacylglycerol lipase
Probab=94.31 E-value=0.082 Score=44.61 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=29.1
Q ss_pred HHHHHHHhhhhhCCC---CCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 6 ALHWLRENLHAFGGD---PDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 6 al~wi~~~~~~~g~d---~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
.+.-|++-+..+..+ ..+|+|.|||-||.||.+.++....
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHH
Confidence 345555555555443 4689999999999999998876543
No 37
>PLN02719 triacylglycerol lipase
Probab=94.23 E-value=0.084 Score=44.41 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=28.7
Q ss_pred HHHHHHHhhhhhC---CCCCcEEEEEcChHHHHHHHHhhccccc
Q psy3087 6 ALHWLRENLHAFG---GDPDRITLMGHGTGASLANILAVSPVAK 46 (192)
Q Consensus 6 al~wi~~~~~~~g---~d~~~i~v~G~SAGg~la~~~~~~~~~~ 46 (192)
.+.-|++-.+.+. +...+|+|.|||.||.||.+.+......
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHh
Confidence 3444555444443 3456899999999999999988765443
No 38
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=94.17 E-value=0.032 Score=44.58 Aligned_cols=38 Identities=34% Similarity=0.410 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 1 ~D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+|++.|+.++.+.- ..|.+||.+.|.|-||.++++++-
T Consensus 157 ~D~~ravd~l~slp---evD~~rI~v~G~SqGG~lal~~aa 194 (320)
T PF05448_consen 157 LDAVRAVDFLRSLP---EVDGKRIGVTGGSQGGGLALAAAA 194 (320)
T ss_dssp HHHHHHHHHHHTST---TEEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---CcCcceEEEEeecCchHHHHHHHH
Confidence 48888999988764 368999999999999999987653
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=94.12 E-value=0.11 Score=40.47 Aligned_cols=35 Identities=43% Similarity=0.517 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+.++++|+++. + ..+|+|+|+|.||.++..++..
T Consensus 85 Dv~~ai~~L~~~----~--~~~v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 85 DVAAAYRWLIEQ----G--HPPVTLWGLRLGALLALDAANP 119 (266)
T ss_pred HHHHHHHHHHhc----C--CCCEEEEEECHHHHHHHHHHHh
Confidence 566677787653 2 4689999999999999877654
No 40
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=93.95 E-value=0.058 Score=40.25 Aligned_cols=39 Identities=36% Similarity=0.537 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|+.+++.|++++.. .+..||.++|.|.||.++..++...
T Consensus 81 ~~~aa~~~l~~~~~---~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 81 DLQAAVDYLRAQPE---VDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHHHHHHHHHCTTT---CEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHhccc---cCCCcEEEEEEecchHHhhhhhhhc
Confidence 44567778877652 5789999999999999998877643
No 41
>PLN02408 phospholipase A1
Probab=93.85 E-value=0.11 Score=42.11 Aligned_cols=40 Identities=28% Similarity=0.448 Sum_probs=29.7
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
.+.-|++-++.+....-+|+|.|||-||.||.+.+.....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 3445555556666555679999999999999998876543
No 42
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=93.83 E-value=0.087 Score=38.69 Aligned_cols=38 Identities=37% Similarity=0.469 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|+.+|+.|++++-. +..-..++|.|-|+.+++.++...
T Consensus 87 Da~aaldW~~~~hp----~s~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 87 DAAAALDWLQARHP----DSASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred HHHHHHHHHHhhCC----CchhhhhcccchHHHHHHHHHHhc
Confidence 89999999998743 222357899999999999988765
No 43
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.68 E-value=0.12 Score=36.27 Aligned_cols=25 Identities=24% Similarity=0.404 Sum_probs=21.5
Q ss_pred CCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 20 DPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
...+|.|.|||.||++|.++++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 4679999999999999999887653
No 44
>PLN02442 S-formylglutathione hydrolase
Probab=93.66 E-value=0.14 Score=40.10 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=25.4
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.++.++... .|+++++|+|+|.||++++.+++.
T Consensus 131 ~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 131 KLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred HHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHh
Confidence 355444433 488999999999999999988775
No 45
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=93.64 E-value=0.15 Score=37.65 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=25.8
Q ss_pred HHHHHH-HHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 4 VAALHW-LRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 4 ~~al~w-i~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+++ +..-.+.+ +.+++.++|+|.||.+++.++..
T Consensus 53 ~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 53 EEAAQDILATLLDQL--GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred HHHHHHHHHHHHHHc--CCCeEEEEEeccHHHHHHHHHHh
Confidence 344555 34333444 45689999999999999988764
No 46
>KOG2100|consensus
Probab=93.61 E-value=0.076 Score=47.32 Aligned_cols=38 Identities=24% Similarity=0.174 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+..|++++.++- -+|++||+|+|+|.||-++..+...
T Consensus 591 D~~~~~~~~~~~~---~iD~~ri~i~GwSyGGy~t~~~l~~ 628 (755)
T KOG2100|consen 591 DQIEAVKKVLKLP---FIDRSRVAIWGWSYGGYLTLKLLES 628 (755)
T ss_pred HHHHHHHHHHhcc---cccHHHeEEeccChHHHHHHHHhhh
Confidence 7778888887776 5899999999999999999877654
No 47
>PLN02761 lipase class 3 family protein
Probab=93.42 E-value=0.16 Score=42.91 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=28.5
Q ss_pred HHHHHHHhhhhh----CCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 6 ALHWLRENLHAF----GGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 6 al~wi~~~~~~~----g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
.+.-|++-+..+ -+...+|+|.|||-||.||.+.++....
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 344555555555 2345689999999999999998876543
No 48
>PRK10985 putative hydrolase; Provisional
Probab=93.28 E-value=0.16 Score=40.52 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+..+++|++++. + ..+++++|+|.||++++.++.
T Consensus 116 D~~~~i~~l~~~~---~--~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 116 DARFFLRWLQREF---G--HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred HHHHHHHHHHHhC---C--CCCEEEEEecchHHHHHHHHH
Confidence 6667788887642 2 357999999999997766554
No 49
>KOG4409|consensus
Probab=93.18 E-value=0.091 Score=42.06 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHhhhhhCC--CCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 2 DIVAALHWLRENLHAFGG--DPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~--d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
|...|..|..+.+++|.. +.+++.|+|||-||.|++.+++-..
T Consensus 138 d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyP 182 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYP 182 (365)
T ss_pred CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhCh
Confidence 445567788888888743 4579999999999999999998653
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=93.08 E-value=0.17 Score=39.33 Aligned_cols=37 Identities=35% Similarity=0.323 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+.+++++++++.. ..++|.++|+|.||.++..++..
T Consensus 84 d~~~~~~~l~~~~~----g~~~i~l~G~S~Gg~~a~~~a~~ 120 (274)
T TIGR03100 84 DIAAAIDAFREAAP----HLRRIVAWGLCDAASAALLYAPA 120 (274)
T ss_pred HHHHHHHHHHhhCC----CCCcEEEEEECHHHHHHHHHhhh
Confidence 67788888876531 23679999999999998887643
No 51
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=92.95 E-value=0.18 Score=41.26 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 1 ~D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+|.+.||..+.++...+++ .-+++.+|.|-||-||.+.+-
T Consensus 164 iD~INAl~~l~k~~~~~~~-~lp~I~~G~s~G~yla~l~~k 203 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGG-GLPKIYIGSSHGGYLAHLCAK 203 (403)
T ss_pred HHHHHHHHHHHHhhhcccC-CCcEEEEecCcHHHHHHHHHh
Confidence 5899999999999887765 447889999999999987764
No 52
>PLN02454 triacylglycerol lipase
Probab=92.81 E-value=0.22 Score=41.02 Aligned_cols=41 Identities=34% Similarity=0.438 Sum_probs=29.1
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccccc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAK 46 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~ 46 (192)
.+..|++-.+.+....-+|+|.|||-||.||.+.+......
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~ 252 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVEN 252 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHh
Confidence 34555555555544434699999999999999988765443
No 53
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=92.74 E-value=0.27 Score=37.20 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=26.9
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+++.|.+....-...+++|++.|||.||.+|..+....
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~ 106 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLP 106 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhcc
Confidence 44555444433356788999999999999888776543
No 54
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=92.50 E-value=0.22 Score=39.56 Aligned_cols=38 Identities=11% Similarity=0.174 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+.++++++..... .+..+++|+|+|.||.++..++..
T Consensus 117 D~~~~i~~l~~~~~---~~~~~i~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 117 DCLSFFNSVKQREE---FQGLPRFLYGESMGGAICLLIHLA 154 (330)
T ss_pred HHHHHHHHHHhccc---CCCCCEEEEEecchhHHHHHHHhc
Confidence 45566666654321 233479999999999999877654
No 55
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=92.43 E-value=0.2 Score=38.70 Aligned_cols=41 Identities=27% Similarity=0.503 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhhhh-----CCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 3 IVAALHWLRENLHAF-----GGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 3 ~~~al~wi~~~~~~~-----g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+.+.++|+.+....+ .+|..+++++|||-||..|-++++..
T Consensus 96 aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~ 141 (307)
T PF07224_consen 96 AASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGY 141 (307)
T ss_pred HHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcc
Confidence 456789999886655 46788999999999999998888854
No 56
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=92.21 E-value=0.2 Score=43.34 Aligned_cols=38 Identities=32% Similarity=0.412 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|-++|.+.+.++.- +++++|+++|-||||.|..+++-.
T Consensus 510 DFIa~a~~Lv~~g~---~~~~~i~a~GGSAGGmLmGav~N~ 547 (682)
T COG1770 510 DFIAAARHLVKEGY---TSPDRIVAIGGSAGGMLMGAVANM 547 (682)
T ss_pred HHHHHHHHHHHcCc---CCccceEEeccCchhHHHHHHHhh
Confidence 56677777766542 688999999999999998876643
No 57
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=92.13 E-value=0.089 Score=42.75 Aligned_cols=37 Identities=41% Similarity=0.422 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|...++.|+...- ..|++||.++|+|.||..++.++.
T Consensus 209 ddmr~lDfL~slp---eVD~~RIG~~GfSmGg~~a~~LaA 245 (390)
T PF12715_consen 209 DDMRALDFLASLP---EVDPDRIGCMGFSMGGYRAWWLAA 245 (390)
T ss_dssp HHHHHHHHHCT-T---TEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHHhcCc---ccCccceEEEeecccHHHHHHHHH
Confidence 3455667776554 379999999999999999887754
No 58
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=91.92 E-value=0.36 Score=40.33 Aligned_cols=26 Identities=31% Similarity=0.378 Sum_probs=22.5
Q ss_pred hCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 17 FGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 17 ~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
++.+.+++.|+|+|.|||+|..++..
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHh
Confidence 45678999999999999999987754
No 59
>PLN02802 triacylglycerol lipase
Probab=91.72 E-value=0.3 Score=41.13 Aligned_cols=38 Identities=29% Similarity=0.398 Sum_probs=27.8
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
.-|++-...+.+..-+|+|.|||-||.||.+.+.....
T Consensus 316 ~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 316 GEVRRLMEKYKGEELSITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred HHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHH
Confidence 33444445565555689999999999999998876543
No 60
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=91.59 E-value=0.16 Score=41.86 Aligned_cols=34 Identities=29% Similarity=0.272 Sum_probs=28.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
++|.|+.... -.|.+||.++|.|.||+.|.-++.
T Consensus 247 aVLd~L~~~p---~VD~~RV~~~G~SfGGy~AvRlA~ 280 (411)
T PF06500_consen 247 AVLDYLASRP---WVDHTRVGAWGFSFGGYYAVRLAA 280 (411)
T ss_dssp HHHHHHHHST---TEEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHhcCC---ccChhheEEEEeccchHHHHHHHH
Confidence 5778887754 279999999999999999987764
No 61
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=91.47 E-value=0.36 Score=41.48 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+.++++|+.++- +. + .+|.++|+|.||.++..++..
T Consensus 81 D~~~~i~~l~~q~--~~-~-~~v~~~G~S~GG~~a~~~a~~ 117 (550)
T TIGR00976 81 DGYDLVDWIAKQP--WC-D-GNVGMLGVSYLAVTQLLAAVL 117 (550)
T ss_pred HHHHHHHHHHhCC--CC-C-CcEEEEEeChHHHHHHHHhcc
Confidence 7889999998772 32 3 699999999999998887764
No 62
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=91.31 E-value=0.29 Score=40.52 Aligned_cols=35 Identities=31% Similarity=0.237 Sum_probs=27.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+++.|+.... ..|.+||.++|+|.||+++..++..
T Consensus 251 avld~l~~~~---~vd~~ri~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 251 AVLNALPNVP---WVDHTRVAAFGFRFGANVAVRLAYL 285 (414)
T ss_pred HHHHHHHhCc---ccCcccEEEEEEChHHHHHHHHHHh
Confidence 4566665542 3588999999999999999987754
No 63
>PLN02571 triacylglycerol lipase
Probab=91.23 E-value=0.31 Score=40.16 Aligned_cols=41 Identities=34% Similarity=0.464 Sum_probs=27.8
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccC
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
+.-|++-++.+....-+|+|.|||-||.||.+.++.....+
T Consensus 211 l~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g 251 (413)
T PLN02571 211 LNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANG 251 (413)
T ss_pred HHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhc
Confidence 34444444444433347999999999999999887654433
No 64
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=91.21 E-value=0.35 Score=38.21 Aligned_cols=40 Identities=35% Similarity=0.572 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHhhhhhCC--CCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 2 DIVAALHWLRENLHAFGG--DPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~--d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
|+.+++++++..- +| ..++|+|+|||.|-+-++.++....
T Consensus 89 eI~~~v~ylr~~~---~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~ 130 (303)
T PF08538_consen 89 EIAQLVEYLRSEK---GGHFGREKIVLMGHSTGCQDVLHYLSSPN 130 (303)
T ss_dssp HHHHHHHHHHHHS---------S-EEEEEECCHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHhh---ccccCCccEEEEecCCCcHHHHHHHhccC
Confidence 5667888888764 34 6789999999999999988876543
No 65
>KOG1552|consensus
Probab=91.16 E-value=0.31 Score=37.40 Aligned_cols=36 Identities=42% Similarity=0.693 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+.+|.+|+++.- | ..++|.|.|+|-|..-+..++-
T Consensus 114 Di~avye~Lr~~~---g-~~~~Iil~G~SiGt~~tv~Las 149 (258)
T KOG1552|consen 114 DIKAVYEWLRNRY---G-SPERIILYGQSIGTVPTVDLAS 149 (258)
T ss_pred hHHHHHHHHHhhc---C-CCceEEEEEecCCchhhhhHhh
Confidence 7889999999863 4 8899999999999887554443
No 66
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=91.10 E-value=0.59 Score=33.82 Aligned_cols=32 Identities=38% Similarity=0.472 Sum_probs=23.4
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+-++..+. .++.++|+|.||.++..++..
T Consensus 55 ~l~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 55 DLAELLDALGI--KKVILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp HHHHHHHHTTT--SSEEEEEETHHHHHHHHHHHH
T ss_pred hhhhccccccc--ccccccccccccccccccccc
Confidence 33344444444 689999999999999988764
No 67
>PRK10673 acyl-CoA esterase; Provisional
Probab=90.92 E-value=0.39 Score=36.28 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=23.3
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+-+..++. +++.|+|+|.||.+++.++..
T Consensus 70 d~~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 70 DLLDTLDALQI--EKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred HHHHHHHHcCC--CceEEEEECHHHHHHHHHHHh
Confidence 34444444443 569999999999999988765
No 68
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=90.83 E-value=0.39 Score=38.57 Aligned_cols=30 Identities=33% Similarity=0.538 Sum_probs=22.9
Q ss_pred hhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 16 AFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 16 ~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
..|.++++|.|+|+|-|||+|..+.-....
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccC
Confidence 568899999999999999999988765443
No 69
>PLN02324 triacylglycerol lipase
Probab=90.80 E-value=0.45 Score=39.23 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=24.7
Q ss_pred HHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 10 LRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 10 i~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|++-++.+....-+|+|.|||-||.||.+.+...
T Consensus 203 V~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 203 LKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 3444444444345899999999999999988754
No 70
>PHA02857 monoglyceride lipase; Provisional
Probab=90.63 E-value=0.54 Score=36.15 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.8
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+++|+|+|.||.++..++..
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHh
Confidence 4679999999999999887754
No 71
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=90.63 E-value=0.57 Score=34.60 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=23.4
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.+.+-+..++ .+++.++|+|.||.++..++..
T Consensus 67 ~~~~~~i~~~~--~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 67 DDVLALLDHLG--IERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHhC--CCceEEEEeCchHHHHHHHHHH
Confidence 34444444443 4689999999999999877654
No 72
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=90.48 E-value=0.52 Score=35.11 Aligned_cols=25 Identities=28% Similarity=0.229 Sum_probs=21.6
Q ss_pred cEEEEEcChHHHHHHHHhhcccccC
Q psy3087 23 RITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
.+.++|+|.||.+|..++......+
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G 91 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAG 91 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred CeeehccCccHHHHHHHHHHHHHhh
Confidence 8999999999999999987765554
No 73
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=90.38 E-value=0.49 Score=38.11 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.+++.++.++. ...+|.+.|+|.||.++..++..
T Consensus 122 ~~~~v~~l~~~~-----~~~~i~lvGhS~GG~i~~~~~~~ 156 (350)
T TIGR01836 122 IDKCVDYICRTS-----KLDQISLLGICQGGTFSLCYAAL 156 (350)
T ss_pred HHHHHHHHHHHh-----CCCcccEEEECHHHHHHHHHHHh
Confidence 556777777653 33689999999999999877653
No 74
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=90.22 E-value=0.76 Score=33.71 Aligned_cols=37 Identities=41% Similarity=0.496 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|..+++..+.+. +|.+. +.+.|+|-||.++..++...
T Consensus 29 ~~~~~~~~~~~~---l~~~~--~~~vG~S~Gg~~~~~~a~~~ 65 (230)
T PF00561_consen 29 DLAADLEALREA---LGIKK--INLVGHSMGGMLALEYAAQY 65 (230)
T ss_dssp HHHHHHHHHHHH---HTTSS--EEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH---hCCCC--eEEEEECCChHHHHHHHHHC
Confidence 344555555553 34444 99999999999999887653
No 75
>PLN02847 triacylglycerol lipase
Probab=90.17 E-value=0.39 Score=41.32 Aligned_cols=42 Identities=26% Similarity=0.423 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhhh-----hCCCC-CcEEEEEcChHHHHHHHHhhcccc
Q psy3087 4 VAALHWLRENLHA-----FGGDP-DRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 4 ~~al~wi~~~~~~-----~g~d~-~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
+.|.+||.+.+.. +...+ -+|+|.|||-||.+|+++++..+.
T Consensus 227 l~AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 227 VAAARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHhc
Confidence 4567888775421 22233 589999999999999998876653
No 76
>PLN02310 triacylglycerol lipase
Probab=90.03 E-value=0.56 Score=38.61 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=25.0
Q ss_pred HHHHHhhhhhC--CCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 8 HWLRENLHAFG--GDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 8 ~wi~~~~~~~g--~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.-|++-...+. +...+|+|.|||-||.||.+.++..
T Consensus 193 ~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 193 QEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 33444344443 3345899999999999999888654
No 77
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=89.92 E-value=0.59 Score=38.54 Aligned_cols=24 Identities=25% Similarity=0.403 Sum_probs=20.4
Q ss_pred CCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 20 DPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+..+++++|+|.||.++..++...
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~ 197 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKH 197 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhC
Confidence 456899999999999999887753
No 78
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=89.59 E-value=0.62 Score=37.44 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=19.2
Q ss_pred CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+..+++|+|+|.||.++..++..
T Consensus 160 ~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 160 RGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred CCCCEEEEEeccchHHHHHHHHh
Confidence 34579999999999999887764
No 79
>PF03283 PAE: Pectinacetylesterase
Probab=89.52 E-value=0.57 Score=38.11 Aligned_cols=37 Identities=24% Similarity=0.217 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.++|.|+.++ .+ .++++|+|.|.||||.-+...+-.
T Consensus 140 ~~avl~~l~~~--gl-~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 140 LRAVLDDLLSN--GL-PNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHh--cC-cccceEEEeccChHHHHHHHHHHH
Confidence 45788899888 22 468999999999999876665443
No 80
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.39 E-value=0.84 Score=34.36 Aligned_cols=25 Identities=32% Similarity=0.501 Sum_probs=21.1
Q ss_pred CCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 20 DPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
...+|.+.|||-||.+|..+++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 3468999999999999998887644
No 81
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=89.38 E-value=0.89 Score=34.01 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=28.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
....++.+-++..+ .+++.++|+|.||.++..++...
T Consensus 51 ~~~~~l~~~l~~~~--~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 51 DVSRLLSQTLQSYN--ILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhC
Confidence 34566666666654 46899999999999999887753
No 82
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=88.78 E-value=0.88 Score=37.71 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=26.0
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-||.++. .+..|+++.+|+|.|.||..|..+++.
T Consensus 275 P~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 275 PQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred HHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHh
Confidence 4454442 235688999999999999999988775
No 83
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=88.72 E-value=1 Score=33.50 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=24.5
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+.+-+..+ +..++.++|+|.||.++..++..
T Consensus 67 ~~~~~~~i~~~--~~~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 67 ADDVLQLLDAL--NIERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred HHHHHHHHHHh--CCCcEEEEEechhHHHHHHHHHH
Confidence 34445555444 35689999999999999887754
No 84
>PLN02511 hydrolase
Probab=88.45 E-value=0.85 Score=37.42 Aligned_cols=37 Identities=11% Similarity=0.118 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|+.++++++.... ...+++++|+|.||+++..++...
T Consensus 158 Dl~~~i~~l~~~~-----~~~~~~lvG~SlGg~i~~~yl~~~ 194 (388)
T PLN02511 158 DLRQVVDHVAGRY-----PSANLYAAGWSLGANILVNYLGEE 194 (388)
T ss_pred HHHHHHHHHHHHC-----CCCCEEEEEechhHHHHHHHHHhc
Confidence 5666777776542 235799999999999998877543
No 85
>PRK11071 esterase YqiA; Provisional
Probab=88.36 E-value=1.1 Score=32.85 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=24.7
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+++.+-+..++. +++.++|+|.||.++..++..
T Consensus 48 ~~~l~~l~~~~~~--~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 48 AELLESLVLEHGG--DPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHHHcCC--CCeEEEEECHHHHHHHHHHHH
Confidence 3444444555443 579999999999999988765
No 86
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=88.27 E-value=0.86 Score=34.00 Aligned_cols=39 Identities=26% Similarity=0.409 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+...++++|.+.+.+-|- -..|+|+|-||.+|+.++...
T Consensus 85 ~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp --HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHH
Confidence 356789999998887542 478999999999999887643
No 87
>PLN03037 lipase class 3 family protein; Provisional
Probab=88.22 E-value=0.87 Score=38.60 Aligned_cols=26 Identities=31% Similarity=0.491 Sum_probs=21.2
Q ss_pred CCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 19 GDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
+..-+|+|.|||-||.||.+.++...
T Consensus 315 ge~~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 315 GEEVSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred CCcceEEEeccCHHHHHHHHHHHHHH
Confidence 34557999999999999998886543
No 88
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=87.89 E-value=0.89 Score=36.53 Aligned_cols=36 Identities=28% Similarity=0.492 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHH
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANIL 39 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~ 39 (192)
|..+.+++++++.. |..+.+|++.|+|-||..++.+
T Consensus 197 ~~~a~v~yL~d~~~--G~ka~~Ii~yG~SLGG~Vqa~A 232 (365)
T PF05677_consen 197 DYQACVRYLRDEEQ--GPKAKNIILYGHSLGGGVQAEA 232 (365)
T ss_pred HHHHHHHHHHhccc--CCChheEEEeeccccHHHHHHH
Confidence 45567778876543 6789999999999999988763
No 89
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=87.79 E-value=0.98 Score=35.12 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=22.8
Q ss_pred HhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 12 ENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 12 ~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+-+..+++ +++.++|+|.||.+++.++...
T Consensus 94 ~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 94 DFCSDVVG--DPAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred HHHHHhcC--CCeEEEEeCHHHHHHHHHHHhC
Confidence 33444444 6899999999999999887753
No 90
>PRK00870 haloalkane dehalogenase; Provisional
Probab=87.74 E-value=1.3 Score=34.58 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=26.2
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-.+++.+-+...++ +++++.|+|.||.++..++..
T Consensus 101 ~a~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 101 HVEWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred HHHHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHh
Confidence 34555655565544 579999999999999988864
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=87.69 E-value=1.4 Score=34.20 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=29.3
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
-.+..|++.+........+++++|||.|+.++.-+.-..
T Consensus 67 hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~ 105 (266)
T PF10230_consen 67 HKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRL 105 (266)
T ss_pred HHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhc
Confidence 356667777665544567899999999999998776543
No 92
>PRK10749 lysophospholipase L2; Provisional
Probab=87.64 E-value=1.1 Score=35.85 Aligned_cols=23 Identities=9% Similarity=0.210 Sum_probs=19.5
Q ss_pred CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+..++.++|+|.||.++..++..
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQR 151 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHh
Confidence 45789999999999999877764
No 93
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.42 E-value=0.41 Score=37.22 Aligned_cols=40 Identities=33% Similarity=0.351 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHh-hccc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA-VSPV 44 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~-~~~~ 44 (192)
|++.|+.-+..- .-.|.+||.+.|.|-||.|+++++ +.++
T Consensus 159 D~~~ave~~~sl---~~vde~Ri~v~G~SqGGglalaaaal~~r 199 (321)
T COG3458 159 DAVRAVEILASL---DEVDEERIGVTGGSQGGGLALAAAALDPR 199 (321)
T ss_pred HHHHHHHHHhcc---CccchhheEEeccccCchhhhhhhhcChh
Confidence 455555444332 246899999999999999988654 4443
No 94
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=87.24 E-value=0.79 Score=36.90 Aligned_cols=35 Identities=29% Similarity=0.570 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
++..-+.|+.++ .+ .++.|.|-|.||++|++++..
T Consensus 161 E~~~Ll~Wl~~~--G~----~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 161 ESRALLHWLERE--GY----GPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHHHHHHHHhc--CC----CceEEEEechhHhhHHhhhhc
Confidence 455667899887 22 389999999999999987654
No 95
>COG1647 Esterase/lipase [General function prediction only]
Probab=86.81 E-value=4.7 Score=30.53 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=22.5
Q ss_pred CcEEEEEcChHHHHHHHHhhcccccCC
Q psy3087 22 DRITLMGHGTGASLANILAVSPVAKGK 48 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~~~~~~~ 48 (192)
+.|.|+|-|.||-+++-++.+..-+++
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p~K~i 111 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYPPKKI 111 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCCccce
Confidence 579999999999999999877655554
No 96
>PRK03204 haloalkane dehalogenase; Provisional
Probab=86.64 E-value=1.4 Score=34.42 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=18.7
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+++.++|+|.||.++..++..
T Consensus 100 ~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 100 LDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred CCCEEEEEECccHHHHHHHHHh
Confidence 4679999999999999887754
No 97
>PLN00413 triacylglycerol lipase
Probab=86.61 E-value=1.4 Score=36.98 Aligned_cols=22 Identities=27% Similarity=0.520 Sum_probs=19.0
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+|.|.|||.||++|...+..
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHH
Confidence 4579999999999999988754
No 98
>KOG2564|consensus
Probab=86.43 E-value=0.48 Score=37.04 Aligned_cols=26 Identities=42% Similarity=0.654 Sum_probs=20.8
Q ss_pred hCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 17 FGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 17 ~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
||-.+..|++.|||.||.+|+..+..
T Consensus 141 fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 141 FGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred hccCCCceEEEeccccchhhhhhhhh
Confidence 34567889999999999999766553
No 99
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=86.30 E-value=1.7 Score=35.80 Aligned_cols=21 Identities=29% Similarity=0.276 Sum_probs=17.8
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+++|+|+|.||.++..++..
T Consensus 208 ~~i~lvGhSmGG~ial~~a~~ 228 (395)
T PLN02652 208 VPCFLFGHSTGGAVVLKAASY 228 (395)
T ss_pred CCEEEEEECHHHHHHHHHHhc
Confidence 379999999999999876654
No 100
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=86.10 E-value=1.7 Score=32.78 Aligned_cols=22 Identities=36% Similarity=0.530 Sum_probs=18.8
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.++++++|+|.||.++..++..
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHHh
Confidence 4569999999999999987764
No 101
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.01 E-value=1.2 Score=39.96 Aligned_cols=41 Identities=20% Similarity=0.445 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHhhhhhCC-----------CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGG-----------DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~-----------d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|..+++.|+..+...|-- -..||.++|.|.||.++.+++..
T Consensus 307 D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~ 358 (767)
T PRK05371 307 SMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATT 358 (767)
T ss_pred HHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhh
Confidence 778899999987543321 15799999999999999877653
No 102
>PLN02965 Probable pheophorbidase
Probab=86.00 E-value=1.6 Score=33.17 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=25.9
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..++.+-++.+++. .++++.|+|.||.++..++..
T Consensus 58 a~dl~~~l~~l~~~-~~~~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 58 NRPLFALLSDLPPD-HKVILVGHSIGGGSVTEALCK 92 (255)
T ss_pred HHHHHHHHHhcCCC-CCEEEEecCcchHHHHHHHHh
Confidence 34555556655432 589999999999999988764
No 103
>PLN02872 triacylglycerol lipase
Probab=85.99 E-value=1.5 Score=36.20 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+.++++++.+. ..+++.++|+|.||.++..++.
T Consensus 146 Dl~a~id~i~~~------~~~~v~~VGhS~Gg~~~~~~~~ 179 (395)
T PLN02872 146 DLAEMIHYVYSI------TNSKIFIVGHSQGTIMSLAALT 179 (395)
T ss_pred HHHHHHHHHHhc------cCCceEEEEECHHHHHHHHHhh
Confidence 667777777653 1368999999999998875543
No 104
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=85.88 E-value=0.97 Score=37.05 Aligned_cols=23 Identities=35% Similarity=0.294 Sum_probs=19.1
Q ss_pred CCCCcEEEEEcChHHHHHHHHhh
Q psy3087 19 GDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
.|.++|+++|||-||..+..++.
T Consensus 225 lD~~~i~~~GHSFGGATa~~~l~ 247 (379)
T PF03403_consen 225 LDLSRIGLAGHSFGGATALQALR 247 (379)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHH
T ss_pred cchhheeeeecCchHHHHHHHHh
Confidence 45789999999999998886554
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=85.13 E-value=1.3 Score=31.83 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=26.4
Q ss_pred HHHHHhhh-hhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLH-AFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~-~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+|++..+. .-+++-..++++|.|.||-.+.+++-.
T Consensus 74 ~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade 109 (213)
T COG3571 74 EYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADE 109 (213)
T ss_pred HHHHHHHHHHhcccCCceeeccccccchHHHHHHHh
Confidence 46666553 235677789999999999999988754
No 106
>KOG4391|consensus
Probab=85.12 E-value=0.24 Score=37.23 Aligned_cols=37 Identities=32% Similarity=0.429 Sum_probs=30.4
Q ss_pred ChHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHh
Q psy3087 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40 (192)
Q Consensus 1 ~D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~ 40 (192)
+|..+|+.++..+-. .|-.+|+++|.|-||..|..++
T Consensus 131 lDs~avldyl~t~~~---~dktkivlfGrSlGGAvai~la 167 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPD---LDKTKIVLFGRSLGGAVAIHLA 167 (300)
T ss_pred ccHHHHHHHHhcCcc---CCcceEEEEecccCCeeEEEee
Confidence 588999999988753 5788999999999998765544
No 107
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=85.06 E-value=1.6 Score=33.12 Aligned_cols=22 Identities=32% Similarity=0.450 Sum_probs=18.6
Q ss_pred CcEEEEEcChHHHHHHHHhhcc
Q psy3087 22 DRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+++.|+|+|.||.+++.++...
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~ 116 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDG 116 (278)
T ss_pred CCceEEEECccHHHHHHHHHhC
Confidence 5789999999999999887543
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=84.95 E-value=1.1 Score=34.64 Aligned_cols=36 Identities=14% Similarity=0.309 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|..++++|+.++ .+ ...||.+.|.|.+|..+..++.
T Consensus 85 D~~d~I~W~~~Q--pw--s~G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 85 DGYDTIEWIAAQ--PW--SNGKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp HHHHHHHHHHHC--TT--EEEEEEEEEETHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC--CC--CCCeEEeeccCHHHHHHHHHHh
Confidence 788999999997 22 4468999999999999888776
No 109
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=84.28 E-value=1.9 Score=31.62 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=18.3
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
+++.++|+|.||.++..++..
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHH
Confidence 689999999999999877754
No 110
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=84.03 E-value=2.5 Score=32.79 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=24.4
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.+.+-+...++ .+++++.|+|.||.++..++..
T Consensus 74 ~~l~~~i~~l~~-~~~v~lvGhS~GG~v~~~~a~~ 107 (273)
T PLN02211 74 KPLIDFLSSLPE-NEKVILVGHSAGGLSVTQAIHR 107 (273)
T ss_pred HHHHHHHHhcCC-CCCEEEEEECchHHHHHHHHHh
Confidence 445555555433 4789999999999998877653
No 111
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.73 E-value=3 Score=30.65 Aligned_cols=36 Identities=25% Similarity=0.406 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 4 VAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 4 ~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
..|+.-+.+-+++.. ++.++|+|-|.||..|..++-
T Consensus 43 ~~a~~~l~~~i~~~~--~~~~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 43 EEAIAQLEQLIEELK--PENVVLIGSSLGGFYATYLAE 78 (187)
T ss_pred HHHHHHHHHHHHhCC--CCCeEEEEEChHHHHHHHHHH
Confidence 345555666666543 334999999999999998764
No 112
>COG4099 Predicted peptidase [General function prediction only]
Probab=83.63 E-value=1.8 Score=34.28 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=29.9
Q ss_pred HHHHHHH-HhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 5 AALHWLR-ENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 5 ~al~wi~-~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+.+.-|. .-++.+++|.+||.|.|.|-||..+..++.
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~ 288 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAE 288 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHH
Confidence 4556666 445789999999999999999998887765
No 113
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=83.47 E-value=2.2 Score=32.87 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=23.9
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.+.+-++.+ +.+++.|+|+|.||.+++.++...
T Consensus 80 ~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 80 LAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred HHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHC
Confidence 333444444 346799999999999999888653
No 114
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.26 E-value=3.1 Score=31.07 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|+.+|+++--+|.- +| +.|+|+|||-|+.+...+.-
T Consensus 79 DV~~AF~~yL~~~n--~G--RPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 79 DVRAAFDYYLANYN--NG--RPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHHHHHHHHHHhcC--CC--CCEEEEEeChHHHHHHHHHH
Confidence 78888887766642 12 45999999999998876653
No 115
>KOG4569|consensus
Probab=83.14 E-value=0.76 Score=37.01 Aligned_cols=28 Identities=32% Similarity=0.445 Sum_probs=23.1
Q ss_pred CCcEEEEEcChHHHHHHHHhhcccccCC
Q psy3087 21 PDRITLMGHGTGASLANILAVSPVAKGK 48 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~~~~~~ 48 (192)
.-+|.|.|||.||.||.+.+......++
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 4679999999999999998887655544
No 116
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=82.86 E-value=2.9 Score=33.09 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=25.6
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
..++-+.+.+..- .-..+++|+|||.||.++..++....
T Consensus 91 ~dl~~~~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~ 129 (298)
T COG2267 91 DDLDAFVETIAEP-DPGLPVFLLGHSMGGLIALLYLARYP 129 (298)
T ss_pred HHHHHHHHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCC
Confidence 3444444444321 23357999999999999998877543
No 117
>PRK03592 haloalkane dehalogenase; Provisional
Probab=82.56 E-value=3.2 Score=32.22 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=24.6
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+.+..-++.++. +++.+.|+|.||.++..++...
T Consensus 81 ~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~ 114 (295)
T PRK03592 81 RYLDAWFDALGL--DDVVLVGHDWGSALGFDWAARH 114 (295)
T ss_pred HHHHHHHHHhCC--CCeEEEEECHHHHHHHHHHHhC
Confidence 334444444444 6799999999999999887654
No 118
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=82.15 E-value=2.9 Score=33.48 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=24.3
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+.+-+..+ +..++++.|+|.||.++..++..
T Consensus 184 ~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 184 AAAVLAFLDAL--GIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred HHHHHHHHHhc--CCccEEEEeechHHHHHHHHHHh
Confidence 34444444444 45689999999999999977754
No 119
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=81.64 E-value=1.1 Score=33.86 Aligned_cols=33 Identities=33% Similarity=0.583 Sum_probs=24.7
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.||.++ |..++.+.+|+|.|.||..|..+++.
T Consensus 103 ~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 103 IPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp HHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHH
T ss_pred hhHHHHh---cccccceeEEeccCCCcHHHHHHHHh
Confidence 3444444 45566669999999999999988875
No 120
>PLN02162 triacylglycerol lipase
Probab=81.45 E-value=3.5 Score=34.67 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.7
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+|.|.|||-||.||.+++..
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred CceEEEEecChHHHHHHHHHHH
Confidence 4689999999999999987653
No 121
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=81.11 E-value=3.6 Score=32.29 Aligned_cols=23 Identities=22% Similarity=0.201 Sum_probs=19.4
Q ss_pred CCcEEEEEcChHHHHHHHHhhcc
Q psy3087 21 PDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.+++.++|+|.||.++..++...
T Consensus 94 ~~~~~lvG~S~GG~ia~~~a~~~ 116 (306)
T TIGR01249 94 IKNWLVFGGSWGSTLALAYAQTH 116 (306)
T ss_pred CCCEEEEEECHHHHHHHHHHHHC
Confidence 45799999999999999887643
No 122
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=80.67 E-value=4.1 Score=32.77 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=24.8
Q ss_pred HHHHHhhhhhCCCCCc-EEEEEcChHHHHHHHHhhcc
Q psy3087 8 HWLRENLHAFGGDPDR-ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~-i~v~G~SAGg~la~~~~~~~ 43 (192)
+.+.+-++.+|. ++ ++|+|+|.||.++..++...
T Consensus 114 ~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 114 KAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred HHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHC
Confidence 444444555544 56 99999999999999887653
No 123
>KOG3724|consensus
Probab=80.39 E-value=3.2 Score=37.12 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=27.6
Q ss_pred HHHHHHHHhhhh-hCCC---CCcEEEEEcChHHHHHHHHhhccc
Q psy3087 5 AALHWLRENLHA-FGGD---PDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 5 ~al~wi~~~~~~-~g~d---~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
.|++.|-+--++ -.++ |..|++.|||.||..|.++++..+
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn 204 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKN 204 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhh
Confidence 455555543322 2234 778999999999999998887653
No 124
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=79.58 E-value=2.7 Score=33.62 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=17.2
Q ss_pred CcEEEEEcChHHHHHHHHhh
Q psy3087 22 DRITLMGHGTGASLANILAV 41 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~ 41 (192)
..++|+|+|.||.++..++.
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred CceeEeeccCccHHHHHHHH
Confidence 46999999999999987764
No 125
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.93 E-value=12 Score=28.75 Aligned_cols=26 Identities=35% Similarity=0.363 Sum_probs=22.6
Q ss_pred cEEEEEcChHHHHHHHHhhcccccCC
Q psy3087 23 RITLMGHGTGASLANILAVSPVAKGK 48 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~~~~~~~~ 48 (192)
..+++|+|.||.+|--++...+..+.
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~ 100 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGL 100 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCC
Confidence 49999999999999999988776665
No 126
>PRK10349 carboxylesterase BioH; Provisional
Probab=78.75 E-value=4.1 Score=30.80 Aligned_cols=22 Identities=27% Similarity=0.566 Sum_probs=19.3
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+++.++|+|.||.++..++..
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 4789999999999999988764
No 127
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=78.66 E-value=3.4 Score=31.59 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=23.8
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+-++.+ +.+++.+.|+|.||.++..++..
T Consensus 90 ~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 90 AVKGLMDAL--DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred HHHHHHHHc--CCCCeeEEEECchHHHHHHHHHh
Confidence 344444443 55689999999999999988764
No 128
>PLN02934 triacylglycerol lipase
Probab=78.66 E-value=4.1 Score=34.65 Aligned_cols=22 Identities=23% Similarity=0.475 Sum_probs=19.1
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+|+|.|||-||.||..++..
T Consensus 320 ~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 320 NAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CCeEEEeccccHHHHHHHHHHH
Confidence 3589999999999999988754
No 129
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=78.33 E-value=3.4 Score=30.99 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=28.1
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
+.+|.+.+........+|.+.|||-||.++-.+.....
T Consensus 63 ~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 63 AEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred HHHHHHhccccccccccceEEEecccHHHHHHHHHHhh
Confidence 45666666665555679999999999998886655443
No 130
>KOG2237|consensus
Probab=78.30 E-value=2.2 Score=37.11 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|-+++.+++.++.- ..++++++-|.||||.|+++..-
T Consensus 532 Dfia~AeyLve~gy---t~~~kL~i~G~SaGGlLvga~iN 568 (712)
T KOG2237|consen 532 DFIACAEYLVENGY---TQPSKLAIEGGSAGGLLVGACIN 568 (712)
T ss_pred HHHHHHHHHHHcCC---CCccceeEecccCccchhHHHhc
Confidence 56677777777642 46899999999999999886543
No 131
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=76.50 E-value=4.9 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.122 Sum_probs=23.1
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.+.+-+..++.+ ..++|+|+|.||.++..++...
T Consensus 126 dl~~ll~~l~l~-~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 126 AIALLLDALGIA-RLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred HHHHHHHHcCCC-cceEEEEECHHHHHHHHHHHHC
Confidence 334444444443 2357999999999999888753
No 132
>PLN02578 hydrolase
Probab=74.26 E-value=7.3 Score=31.38 Aligned_cols=22 Identities=27% Similarity=0.243 Sum_probs=19.3
Q ss_pred CcEEEEEcChHHHHHHHHhhcc
Q psy3087 22 DRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~~ 43 (192)
++++++|+|.||.++..++...
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~ 173 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGY 173 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhC
Confidence 6799999999999999888754
No 133
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=74.25 E-value=5.1 Score=34.49 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHH
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANI 38 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~ 38 (192)
+.+++..|.+.. ...++.++|+|.||.++++
T Consensus 248 i~~al~~v~~~~-----g~~kv~lvG~cmGGtl~a~ 278 (532)
T TIGR01838 248 VIAALEVVEAIT-----GEKQVNCVGYCIGGTLLST 278 (532)
T ss_pred HHHHHHHHHHhc-----CCCCeEEEEECcCcHHHHH
Confidence 455666666542 4678999999999998643
No 134
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=73.67 E-value=8 Score=31.29 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=22.0
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
.+.+-+..++. +++.|.|+|.||.++..++.
T Consensus 144 ~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~ 174 (360)
T PLN02679 144 LILDFLEEVVQ--KPTVLIGNSVGSLACVIAAS 174 (360)
T ss_pred HHHHHHHHhcC--CCeEEEEECHHHHHHHHHHH
Confidence 44444444444 58999999999998876654
No 135
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=73.12 E-value=5.9 Score=28.78 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=23.9
Q ss_pred HHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 9 WLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 9 wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.+..-...++.+. +.+.|+|.||.++..++...
T Consensus 77 ~~~~~~~~~~~~~--~~l~G~S~Gg~~~~~~~~~~ 109 (282)
T COG0596 77 DLAALLDALGLEK--VVLVGHSMGGAVALALALRH 109 (282)
T ss_pred HHHHHHHHhCCCc--eEEEEecccHHHHHHHHHhc
Confidence 3444445555555 99999999999998887754
No 136
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=72.39 E-value=3.4 Score=32.05 Aligned_cols=26 Identities=15% Similarity=0.463 Sum_probs=22.5
Q ss_pred hCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 17 FGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 17 ~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+..|.++.+|+|+|-||..+.-..+.
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~ 157 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLT 157 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhc
Confidence 56889999999999999999876664
No 137
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=71.11 E-value=8 Score=32.47 Aligned_cols=21 Identities=14% Similarity=0.403 Sum_probs=17.8
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
.++.|.|||.||.++..++..
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHH
Confidence 579999999999999876643
No 138
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=70.16 E-value=7.2 Score=28.11 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=23.4
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHh
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILA 40 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~ 40 (192)
.|+..-..........+++.|||.|...++.++
T Consensus 41 ~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 41 EWVQALDQAIDAIDEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp HHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHH
Confidence 466655454444456699999999999888776
No 139
>KOG1838|consensus
Probab=69.73 E-value=9.7 Score=31.55 Aligned_cols=37 Identities=8% Similarity=0.205 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|..++++.|+++- ...++..+|.|.||++..-+.-..
T Consensus 183 Dl~~~v~~i~~~~-----P~a~l~avG~S~Gg~iL~nYLGE~ 219 (409)
T KOG1838|consen 183 DLREVVNHIKKRY-----PQAPLFAVGFSMGGNILTNYLGEE 219 (409)
T ss_pred HHHHHHHHHHHhC-----CCCceEEEEecchHHHHHHHhhhc
Confidence 7788888888764 345899999999999888776543
No 140
>KOG3101|consensus
Probab=69.03 E-value=1.5 Score=32.99 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=19.4
Q ss_pred hhCCCCCcEEEEEcChHHHHHHHHh
Q psy3087 16 AFGGDPDRITLMGHGTGASLANILA 40 (192)
Q Consensus 16 ~~g~d~~~i~v~G~SAGg~la~~~~ 40 (192)
.+-.|+.++.|+|||.|||=|....
T Consensus 135 ~~pld~~k~~IfGHSMGGhGAl~~~ 159 (283)
T KOG3101|consen 135 NVPLDPLKVGIFGHSMGGHGALTIY 159 (283)
T ss_pred cccccchhcceeccccCCCceEEEE
Confidence 3457899999999999999665433
No 141
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=68.85 E-value=12 Score=29.01 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=19.5
Q ss_pred CCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 20 DPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
...++-+.|||.||..+..++....
T Consensus 101 ~~~~~N~VGHSmGg~~~~~yl~~~~ 125 (255)
T PF06028_consen 101 HFKKFNLVGHSMGGLSWTYYLENYG 125 (255)
T ss_dssp --SEEEEEEETHHHHHHHHHHHHCT
T ss_pred CCCEEeEEEECccHHHHHHHHHHhc
Confidence 3578999999999999888776543
No 142
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=68.44 E-value=11 Score=30.96 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=22.8
Q ss_pred HHHhhhhhCCCCCcEE-EEEcChHHHHHHHHhhcc
Q psy3087 10 LRENLHAFGGDPDRIT-LMGHGTGASLANILAVSP 43 (192)
Q Consensus 10 i~~~~~~~g~d~~~i~-v~G~SAGg~la~~~~~~~ 43 (192)
+.+-++.+|+ +++. |+|+|.||..+..++...
T Consensus 150 ~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 150 QKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred HHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHC
Confidence 3333444554 5675 999999999999888754
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=68.36 E-value=10 Score=29.79 Aligned_cols=38 Identities=24% Similarity=0.266 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhhhhCCC-CCcEEEEEcChHHHHHHHHh
Q psy3087 3 IVAALHWLRENLHAFGGD-PDRITLMGHGTGASLANILA 40 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d-~~~i~v~G~SAGg~la~~~~ 40 (192)
++.++|-.++-....|.. ..++.+.|+|-||+-+...+
T Consensus 51 vLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 51 VLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 345555555544434544 36899999999999776554
No 144
>KOG2183|consensus
Probab=67.03 E-value=10 Score=31.56 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=25.3
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
-|+.++++ .+-....|+++|-|-||+|++...+
T Consensus 154 ll~~lK~~---~~a~~~pvIafGGSYGGMLaAWfRl 186 (492)
T KOG2183|consen 154 LLTFLKRD---LSAEASPVIAFGGSYGGMLAAWFRL 186 (492)
T ss_pred HHHHHhhc---cccccCcEEEecCchhhHHHHHHHh
Confidence 34555555 4556778999999999999998866
No 145
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=66.55 E-value=2.8 Score=33.22 Aligned_cols=15 Identities=33% Similarity=0.680 Sum_probs=13.1
Q ss_pred CCCcEEEEEcChHHH
Q psy3087 20 DPDRITLMGHGTGAS 34 (192)
Q Consensus 20 d~~~i~v~G~SAGg~ 34 (192)
.+.-|++.|||||||
T Consensus 10 ~~~g~i~~gds~~ah 24 (305)
T cd01826 10 QPMGVILLGDSAGAH 24 (305)
T ss_pred CCceEEEeccccccc
Confidence 456799999999998
No 146
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=65.21 E-value=11 Score=31.96 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.8
Q ss_pred CCcEEEEEcChHHHHHHHHhhcc
Q psy3087 21 PDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..++.|+|+|.||+.+..++...
T Consensus 170 ~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 170 ANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred CCCEEEEeecchhhhHHHHHHHH
Confidence 46899999999999887776543
No 147
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=65.08 E-value=14 Score=29.70 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
|....+.|+++. +-+.++..+|.|-||++-+.+..
T Consensus 133 D~~~~l~~l~~~-----~~~r~~~avG~SLGgnmLa~ylg 167 (345)
T COG0429 133 DIRFFLDWLKAR-----FPPRPLYAVGFSLGGNMLANYLG 167 (345)
T ss_pred HHHHHHHHHHHh-----CCCCceEEEEecccHHHHHHHHH
Confidence 566666777662 45678999999999976666554
No 148
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=64.88 E-value=14 Score=28.13 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=25.6
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
+++++.++ |+.++.-.+.|-|||+..+++++....
T Consensus 17 Vl~~L~e~----gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEA----GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHc----CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 45555554 455556789999999999999987653
No 149
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=64.70 E-value=17 Score=29.67 Aligned_cols=34 Identities=24% Similarity=0.188 Sum_probs=24.8
Q ss_pred HHHHHhhhhhCCCCCc-EEEEEcChHHHHHHHHhhcc
Q psy3087 8 HWLRENLHAFGGDPDR-ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~-i~v~G~SAGg~la~~~~~~~ 43 (192)
+++.+-++.++. ++ +.|+|+|.||.++..++...
T Consensus 134 ~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 134 RAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred HHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhC
Confidence 455555566555 46 48999999999998887653
No 150
>KOG2382|consensus
Probab=64.07 E-value=9.9 Score=30.35 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=17.1
Q ss_pred CCCcEEEEEcChHH-HHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGA-SLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg-~la~~~~~~ 42 (192)
-..++.+.|||+|| .++++.++.
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~ 144 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLK 144 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHh
Confidence 45679999999999 555555544
No 151
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=63.87 E-value=22 Score=26.97 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=24.5
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
.+-+.+.+..+-...++++|+|.|-||..+.....
T Consensus 33 ~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~ 67 (225)
T PF08237_consen 33 VANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLR 67 (225)
T ss_pred HHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHH
Confidence 34444555544447788999999999998876554
No 152
>PRK07581 hypothetical protein; Validated
Probab=63.70 E-value=8.1 Score=30.75 Aligned_cols=23 Identities=26% Similarity=0.264 Sum_probs=19.0
Q ss_pred CCc-EEEEEcChHHHHHHHHhhcc
Q psy3087 21 PDR-ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~-i~v~G~SAGg~la~~~~~~~ 43 (192)
.++ +.|+|+|.||.++..++...
T Consensus 122 i~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 122 IERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred CCceEEEEEeCHHHHHHHHHHHHC
Confidence 367 47899999999999888754
No 153
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=63.58 E-value=5.3 Score=32.47 Aligned_cols=39 Identities=36% Similarity=0.353 Sum_probs=26.2
Q ss_pred HHHHHHHHHHh--hhhh--CCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 3 IVAALHWLREN--LHAF--GGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 3 ~~~al~wi~~~--~~~~--g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+-..|-|+.+. ...+ .+|+.+|.+.|+|-||..++.++-
T Consensus 136 is~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 136 ISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred HHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 33444555443 2224 357889999999999998887654
No 154
>PRK06489 hypothetical protein; Provisional
Probab=63.30 E-value=7.6 Score=31.35 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=18.7
Q ss_pred CCcEE-EEEcChHHHHHHHHhhcc
Q psy3087 21 PDRIT-LMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~i~-v~G~SAGg~la~~~~~~~ 43 (192)
.+++. |+|+|.||.++..++...
T Consensus 152 i~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 152 VKHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred CCceeEEEEECHHHHHHHHHHHhC
Confidence 35664 899999999999888754
No 155
>KOG1553|consensus
Probab=62.65 E-value=12 Score=30.38 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=25.7
Q ss_pred hhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 14 LHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 14 ~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|..+|-.++.|++.|+|-||..++.++...
T Consensus 303 I~~Lgf~~edIilygWSIGGF~~~waAs~Y 332 (517)
T KOG1553|consen 303 IQVLGFRQEDIILYGWSIGGFPVAWAASNY 332 (517)
T ss_pred HHHcCCCccceEEEEeecCCchHHHHhhcC
Confidence 566788999999999999999988877654
No 156
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=62.15 E-value=12 Score=28.73 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=23.4
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
+++.+.++....- .+ .|.|-|||+..+++++....
T Consensus 18 Vl~aL~e~g~~~~--~d--~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 18 VAVCLKKYAPHLL--LN--KISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHhCcccC--CC--eEEEEcHHHHHHHHHHhCCc
Confidence 4566666642211 22 29999999999999887543
No 157
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=62.13 E-value=17 Score=25.98 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=23.8
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
-+++++.++ +..+ =.+.|-|+|+.++++++...
T Consensus 17 Gvl~~L~~~----~~~~--d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 17 GVLKALEEA----GIPI--DIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHc----CCCe--eEEEEECHHHHHHHHHHcCC
Confidence 356666654 3333 37999999999999988654
No 158
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=61.37 E-value=4.8 Score=31.20 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=21.3
Q ss_pred cEEEEEcChHHHHHHHHhhcccccC
Q psy3087 23 RITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
...+.|+|.||++|.-++......|
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHhCC
Confidence 6999999999999999887765554
No 159
>PRK05855 short chain dehydrogenase; Validated
Probab=59.80 E-value=22 Score=30.38 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=22.6
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+..-++.++. ...+.|+|+|.||.++..++..
T Consensus 80 a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 80 ADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 3444444444432 2349999999999888766554
No 160
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=59.49 E-value=15 Score=26.69 Aligned_cols=32 Identities=34% Similarity=0.324 Sum_probs=23.0
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+|+.+.++ +..+ =.|.|-||||.++++++...
T Consensus 17 vl~~L~e~----~~~~--d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEA----GILK--KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHc----CCCc--ceEEEECHHHHHHHHHHcCC
Confidence 45555544 4444 68899999999999988754
No 161
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.11 E-value=17 Score=27.34 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=23.0
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+|+.+.++ |..++ .+.|-||||.+++.++...
T Consensus 18 vL~aL~e~----gi~~~--~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM----GLEPS--AISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc----CCCce--EEEEeCHHHHHHHHHHcCC
Confidence 45556554 44443 6999999999999988643
No 162
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=58.62 E-value=7.3 Score=30.76 Aligned_cols=21 Identities=38% Similarity=0.707 Sum_probs=18.6
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+|.+.|||-||.+|+++.+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred ceEEEeccccchHHHHHhccc
Confidence 589999999999999988664
No 163
>KOG4540|consensus
Probab=58.62 E-value=7.3 Score=30.76 Aligned_cols=21 Identities=38% Similarity=0.707 Sum_probs=18.6
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+|.+.|||-||.+|+++.+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred ceEEEeccccchHHHHHhccc
Confidence 589999999999999988664
No 164
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=58.62 E-value=8.4 Score=29.53 Aligned_cols=38 Identities=29% Similarity=0.468 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 1 ~D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+|.-+||.|+++... -......|||-||++.-.+..+.
T Consensus 89 ~D~~aal~~~~~~~~-----~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 89 LDFPAALAALKKALP-----GHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred cchHHHHHHHHhhCC-----CCceEEeeccccceeecccccCc
Confidence 477889999988652 23488999999999776665554
No 165
>PRK04940 hypothetical protein; Provisional
Probab=56.89 E-value=27 Score=25.50 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=24.5
Q ss_pred HHHHHHHHhhhhhC--CCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFG--GDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g--~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.|+.-+.+.++++- +..+++.|+|-|-||.-|..++..
T Consensus 41 ~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~ 80 (180)
T PRK04940 41 HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFL 80 (180)
T ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHH
Confidence 34554444444321 112469999999999998877653
No 166
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=56.65 E-value=21 Score=27.94 Aligned_cols=41 Identities=34% Similarity=0.366 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccC
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~ 47 (192)
+..|.+++.++. -.-++|.|+|+|=||..|-.++-.....+
T Consensus 77 I~~ay~~l~~~~----~~gd~I~lfGFSRGA~~AR~~a~~i~~~G 117 (277)
T PF09994_consen 77 IRDAYRFLSKNY----EPGDRIYLFGFSRGAYTARAFANMIDKIG 117 (277)
T ss_pred HHHHHHHHHhcc----CCcceEEEEecCccHHHHHHHHHHHhhcC
Confidence 345666665554 23456999999999999988775443333
No 167
>KOG3847|consensus
Probab=54.71 E-value=4.4 Score=32.39 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=17.0
Q ss_pred CCCCcEEEEEcChHHHHHHHH
Q psy3087 19 GDPDRITLMGHGTGASLANIL 39 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~ 39 (192)
.|..+++|+|||-||..+...
T Consensus 238 l~~s~~aViGHSFGgAT~i~~ 258 (399)
T KOG3847|consen 238 LDTSQAAVIGHSFGGATSIAS 258 (399)
T ss_pred hhhhhhhheeccccchhhhhh
Confidence 456789999999999876644
No 168
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=54.71 E-value=14 Score=31.40 Aligned_cols=22 Identities=32% Similarity=0.410 Sum_probs=19.0
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..++.++|+|.||.++..++..
T Consensus 273 ~~k~~LVGhSmGG~iAl~~A~~ 294 (481)
T PLN03087 273 VKSFHIVAHSLGCILALALAVK 294 (481)
T ss_pred CCCEEEEEECHHHHHHHHHHHh
Confidence 4579999999999999988764
No 169
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=53.47 E-value=42 Score=24.30 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=17.5
Q ss_pred CCcEEEEEcChHHHHHHHHhh
Q psy3087 21 PDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~ 41 (192)
..+|+|+|.|-||.++.-++-
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~ 100 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALS 100 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHH
T ss_pred CCCEEEEecccccHHHHHHHH
Confidence 358999999999998886654
No 170
>KOG3043|consensus
Probab=52.31 E-value=5.4 Score=30.26 Aligned_cols=49 Identities=27% Similarity=0.424 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCCccccCccccC
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGE 58 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~~~~~g~~hg~ 58 (192)
|..+.++|++. .|+..+|-++|..-||-.+..+.. ..+.+......|++
T Consensus 105 ~i~~v~k~lk~-----~g~~kkIGv~GfCwGak~vv~~~~---~~~~f~a~v~~hps 153 (242)
T KOG3043|consen 105 DITAVVKWLKN-----HGDSKKIGVVGFCWGAKVVVTLSA---KDPEFDAGVSFHPS 153 (242)
T ss_pred HHHHHHHHHHH-----cCCcceeeEEEEeecceEEEEeec---cchhheeeeEecCC
Confidence 45678899994 478899999999999986543322 22244444555654
No 171
>KOG1454|consensus
Probab=51.75 E-value=28 Score=27.91 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=22.1
Q ss_pred HHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 10 LRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 10 i~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+.+-..+++..+ +.+.|+|.||.+|..+|..
T Consensus 118 i~~~~~~~~~~~--~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 118 IRRFVKEVFVEP--VSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred HHHHHHhhcCcc--eEEEEeCcHHHHHHHHHHh
Confidence 334444444433 9999999999999987764
No 172
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=51.69 E-value=15 Score=28.16 Aligned_cols=24 Identities=33% Similarity=0.576 Sum_probs=18.5
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcCh
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGT 31 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SA 31 (192)
.|++|+.+.. +.++++++++|||-
T Consensus 168 ~Al~~L~~~~---~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 168 AALRYLMERW---GIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHH---T--GGGEEEEESSG
T ss_pred HHHHHHHHHh---CCCHHHEEEEeCCC
Confidence 6888888765 67899999999994
No 173
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=51.10 E-value=29 Score=28.19 Aligned_cols=38 Identities=26% Similarity=0.528 Sum_probs=25.3
Q ss_pred HHHHHHHHhhhhhCCCCCcE-----EEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFGGDPDRI-----TLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i-----~v~G~SAGg~la~~~~~~ 42 (192)
..|+-+.+...+..+...+| .|+|-|+||.+|++++..
T Consensus 21 ~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~ 63 (349)
T cd07214 21 TILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAP 63 (349)
T ss_pred HHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcC
Confidence 34556656655444422222 899999999999988763
No 174
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=50.57 E-value=32 Score=34.08 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=24.1
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.++.+-+..++ .+++.|+|+|.||.++..++..
T Consensus 1433 ~~l~~ll~~l~--~~~v~LvGhSmGG~iAl~~A~~ 1465 (1655)
T PLN02980 1433 DLLYKLIEHIT--PGKVTLVGYSMGARIALYMALR 1465 (1655)
T ss_pred HHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHh
Confidence 34444444443 4689999999999999988764
No 175
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=50.50 E-value=22 Score=30.21 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
|+...++.+.+...+++-...+..|+|+|-||+-+..++-....
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 67778888888888777777899999999999977766644333
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=49.36 E-value=38 Score=28.13 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=18.3
Q ss_pred CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+..+++++|-|-||+||+.+.+.
T Consensus 111 ~~~pwI~~GgSY~G~Laaw~r~k 133 (434)
T PF05577_consen 111 PNSPWIVFGGSYGGALAAWFRLK 133 (434)
T ss_dssp CC--EEEEEETHHHHHHHHHHHH
T ss_pred CCCCEEEECCcchhHHHHHHHhh
Confidence 44689999999999999988764
No 177
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=48.72 E-value=26 Score=28.33 Aligned_cols=41 Identities=32% Similarity=0.300 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCC
Q psy3087 4 VAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGK 48 (192)
Q Consensus 4 ~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~ 48 (192)
..|.+++.+|-+. | ++|..+|+|-||..|-+++-..+..++
T Consensus 108 ~~AYrFL~~~yep--G--D~Iy~FGFSRGAf~aRVlagmir~vGl 148 (423)
T COG3673 108 REAYRFLIFNYEP--G--DEIYAFGFSRGAFSARVLAGMIRHVGL 148 (423)
T ss_pred HHHHHHHHHhcCC--C--CeEEEeeccchhHHHHHHHHHHHHhhh
Confidence 3566666666542 3 579999999999999888766555554
No 178
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=48.29 E-value=27 Score=24.94 Aligned_cols=34 Identities=29% Similarity=0.281 Sum_probs=24.7
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhccc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~ 44 (192)
-+++++.++ |.. --.|.|-|||+..+++++....
T Consensus 15 Gvl~aL~e~----gi~--~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER----GPL--IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc----CCC--CCEEEEECHHHHHHHHHHcCCC
Confidence 356666665 233 4678999999999999887543
No 179
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=47.89 E-value=33 Score=29.82 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHH
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANI 38 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~ 38 (192)
+.+|++.|+++. ...+|.+.|.|.||.++++
T Consensus 274 i~~Ald~V~~~t-----G~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 274 LKEAVDAVRAIT-----GSRDLNLLGACAGGLTCAA 304 (560)
T ss_pred HHHHHHHHHHhc-----CCCCeeEEEECcchHHHHH
Confidence 456677776653 3468999999999999886
No 180
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=47.49 E-value=42 Score=27.61 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=25.6
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-.+++.+-+..++. +++.|+|+|-||.++..++..
T Consensus 183 ~a~~l~~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~ 217 (383)
T PLN03084 183 YVSSLESLIDELKS--DKVSLVVQGYFSPPVVKYASA 217 (383)
T ss_pred HHHHHHHHHHHhCC--CCceEEEECHHHHHHHHHHHh
Confidence 34555665666554 579999999999988877764
No 181
>KOG1455|consensus
Probab=47.35 E-value=32 Score=27.43 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=17.3
Q ss_pred cEEEEEcChHHHHHHHHhhc
Q psy3087 23 RITLMGHGTGASLANILAVS 42 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~~ 42 (192)
..+++|+|.||.++..+++.
T Consensus 130 p~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 130 PRFLFGESMGGAVALLIALK 149 (313)
T ss_pred CeeeeecCcchHHHHHHHhh
Confidence 37999999999999888774
No 182
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase
Probab=47.24 E-value=29 Score=30.87 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=31.7
Q ss_pred HhhhhhCCCCCcEEEEEcChHHHHHHHHhhcccccCCc
Q psy3087 12 ENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKC 49 (192)
Q Consensus 12 ~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~~~~~~~ 49 (192)
.=...+++.+....++||-+||..|+++...+..+++|
T Consensus 314 sIL~~~~i~~~d~l~~GDGSGGita~lLR~~p~sr~iF 351 (675)
T PF14314_consen 314 SILKNLNIKYRDALCGGDGSGGITACLLRMNPTSRGIF 351 (675)
T ss_pred HHHHhcCCCcceeEEEecCchHHHHHHHHhCcccceee
Confidence 33567788888899999999999999999888777654
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=47.06 E-value=34 Score=28.20 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=19.2
Q ss_pred CCcEEEEEcChHHHHHHHHhhcc
Q psy3087 21 PDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..+|+|.|||.||.++..+....
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhc
Confidence 57899999999999988766543
No 184
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=46.73 E-value=19 Score=25.77 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=22.8
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+++.+.++ +.++ =.+.|-||||.++++++...
T Consensus 18 vl~~L~e~----g~~~--d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEEE----GIEI--DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHC----CCCe--eEEEEeCHHHHHHHHHHcCC
Confidence 45555554 3332 48899999999999888754
No 185
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=46.69 E-value=50 Score=30.11 Aligned_cols=24 Identities=17% Similarity=0.465 Sum_probs=20.6
Q ss_pred CCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 20 DPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+..++.++|||.||.++..++..+
T Consensus 553 ~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 553 DGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CCCcEEEEecCHHHHHHHHHHHhc
Confidence 457899999999999999888654
No 186
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=45.42 E-value=35 Score=26.95 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=29.6
Q ss_pred HHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 7 l~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..|+.+-..+++++ +++..+|||-|+-.|..++...
T Consensus 90 ~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~ 125 (297)
T PF06342_consen 90 QNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTH 125 (297)
T ss_pred HHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcC
Confidence 45677777778888 8999999999999999887654
No 187
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.56 E-value=40 Score=26.68 Aligned_cols=17 Identities=29% Similarity=0.386 Sum_probs=15.2
Q ss_pred EEEEcChHHHHHHHHhh
Q psy3087 25 TLMGHGTGASLANILAV 41 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~ 41 (192)
.|+|-|+||.+|++++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 89999999999998863
No 188
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=43.53 E-value=34 Score=26.17 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=22.1
Q ss_pred HHHHHHHhhhhhCCCCCcE-EEEEcChHHHHHHHHhh
Q psy3087 6 ALHWLRENLHAFGGDPDRI-TLMGHGTGASLANILAV 41 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i-~v~G~SAGg~la~~~~~ 41 (192)
+++++.++...+ ..++ .|.|-|||+..+++++.
T Consensus 17 Vl~~L~e~g~~l---~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 17 AAKALLRHGKKL---LKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHcCchh---hccCCEEEEECHHHHHHHHHhc
Confidence 455666653211 1233 79999999999999874
No 189
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=42.82 E-value=73 Score=22.55 Aligned_cols=23 Identities=30% Similarity=0.463 Sum_probs=18.6
Q ss_pred CCcEEEEEcChHHHHHHHHhhcc
Q psy3087 21 PDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
..++.++|+|.||.++..++...
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHH
Confidence 35689999999999997776653
No 190
>PHA01735 hypothetical protein
Probab=42.71 E-value=20 Score=21.59 Aligned_cols=12 Identities=50% Similarity=0.947 Sum_probs=10.9
Q ss_pred hHHHHHHHHHHh
Q psy3087 2 DIVAALHWLREN 13 (192)
Q Consensus 2 D~~~al~wi~~~ 13 (192)
|..+|++|+++|
T Consensus 34 DL~AA~d~Lk~N 45 (76)
T PHA01735 34 DLRAACDWLKSN 45 (76)
T ss_pred HHHHHHHHHHHC
Confidence 788999999998
No 191
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=42.23 E-value=63 Score=25.24 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=19.7
Q ss_pred CCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 19 GDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
-+..++-+.|+|+||--...+....
T Consensus 133 Y~i~k~n~VGhSmGg~~~~~Y~~~y 157 (288)
T COG4814 133 YNIPKFNAVGHSMGGLGLTYYMIDY 157 (288)
T ss_pred cCCceeeeeeeccccHHHHHHHHHh
Confidence 4667899999999998777776643
No 192
>KOG2984|consensus
Probab=41.63 E-value=8.6 Score=28.88 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.6
Q ss_pred CCCCcEEEEEcChHHHHHHHHh
Q psy3087 19 GDPDRITLMGHGTGASLANILA 40 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~ 40 (192)
.+..++.|+|+|-||..+..++
T Consensus 111 Lk~~~fsvlGWSdGgiTalivA 132 (277)
T KOG2984|consen 111 LKLEPFSVLGWSDGGITALIVA 132 (277)
T ss_pred hCCCCeeEeeecCCCeEEEEee
Confidence 4678999999999998665444
No 193
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=40.46 E-value=51 Score=26.41 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=24.0
Q ss_pred HHHHHHHHhhhhhCCCCC-cE-----EEEEcChHHHHHHHHh
Q psy3087 5 AALHWLRENLHAFGGDPD-RI-----TLMGHGTGASLANILA 40 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~-~i-----~v~G~SAGg~la~~~~ 40 (192)
..|+-+.+++....|+++ +| .|+|-|+||.+|++++
T Consensus 17 ~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~ 58 (329)
T cd07215 17 TILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYL 58 (329)
T ss_pred HHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHh
Confidence 345556566544445543 22 8999999999998765
No 194
>PRK07868 acyl-CoA synthetase; Validated
Probab=40.40 E-value=54 Score=30.68 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=17.4
Q ss_pred CcEEEEEcChHHHHHHHHhh
Q psy3087 22 DRITLMGHGTGASLANILAV 41 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~ 41 (192)
+++.++|+|.||.+++.++.
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred CceEEEEEChhHHHHHHHHH
Confidence 47999999999999987764
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=40.33 E-value=81 Score=22.96 Aligned_cols=23 Identities=26% Similarity=0.570 Sum_probs=18.5
Q ss_pred CCCCcEEEEEcChHHHHHHHHhh
Q psy3087 19 GDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+...+++++|||-|...+...+.
T Consensus 106 ~~~~~~tv~GHSYGS~v~G~A~~ 128 (177)
T PF06259_consen 106 GPDAHLTVVGHSYGSTVVGLAAQ 128 (177)
T ss_pred CCCCCEEEEEecchhHHHHHHhh
Confidence 55679999999999988776544
No 196
>PLN02382 probable sucrose-phosphatase
Probab=40.18 E-value=32 Score=28.63 Aligned_cols=28 Identities=29% Similarity=0.386 Sum_probs=23.9
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTG 32 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAG 32 (192)
.|++++.+.....|.+++++.++|||.-
T Consensus 178 ~Al~~L~~~~~~~gi~~~~~iafGDs~N 205 (413)
T PLN02382 178 QALAYLLKKLKAEGKAPVNTLVCGDSGN 205 (413)
T ss_pred HHHHHHHHHhhhcCCChhcEEEEeCCHH
Confidence 5888998887767899999999999944
No 197
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=39.56 E-value=14 Score=25.96 Aligned_cols=13 Identities=23% Similarity=0.445 Sum_probs=11.1
Q ss_pred EEEEEcChHHHHH
Q psy3087 24 ITLMGHGTGASLA 36 (192)
Q Consensus 24 i~v~G~SAGg~la 36 (192)
..++|.|||+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 7899999999763
No 198
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.22 E-value=65 Score=26.16 Aligned_cols=38 Identities=26% Similarity=0.404 Sum_probs=26.2
Q ss_pred HHHHHHHHhhhhhCCCCC-c-----EEEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFGGDPD-R-----ITLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~-~-----i~v~G~SAGg~la~~~~~~ 42 (192)
..|+-+.+...+..++|+ + =.|+|-|+||.+|++++..
T Consensus 18 gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g 61 (344)
T cd07217 18 EILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG 61 (344)
T ss_pred HHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC
Confidence 345666666554445542 2 2899999999999998864
No 199
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=39.11 E-value=66 Score=24.38 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=17.9
Q ss_pred CCCcEEEEEcChHHHHHHHHhh
Q psy3087 20 DPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~ 41 (192)
...+|.|++||.|+.+...+.-
T Consensus 91 ~~~~I~ilaHSMG~rv~~~aL~ 112 (233)
T PF05990_consen 91 GIKRIHILAHSMGNRVLLEALR 112 (233)
T ss_pred CCceEEEEEeCchHHHHHHHHH
Confidence 3678999999999998776543
No 200
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=39.02 E-value=45 Score=25.70 Aligned_cols=20 Identities=25% Similarity=0.293 Sum_probs=16.4
Q ss_pred EEEEEcChHHHHHHHHhhcc
Q psy3087 24 ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~~ 43 (192)
-.+.|-|||+..+++++...
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 38 RKIYGASAGALTATALVTGV 57 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCC
Confidence 45789999999999887654
No 201
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.86 E-value=31 Score=26.56 Aligned_cols=33 Identities=18% Similarity=-0.019 Sum_probs=22.5
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+|+.+.++. .. .==.|.|-||||..+++++...
T Consensus 16 vl~al~e~~----~~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 16 VLDAFLEAG----IR-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHcC----CC-CCCEEEEECHHHHhHHHHHhCC
Confidence 455555552 22 1237899999999999887654
No 202
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=38.67 E-value=28 Score=24.50 Aligned_cols=20 Identities=30% Similarity=0.321 Sum_probs=16.6
Q ss_pred EEEEEcChHHHHHHHHhhcc
Q psy3087 24 ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~~ 43 (192)
-.|.|-|+||..+++++...
T Consensus 29 d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALGY 48 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC-
T ss_pred cEEEEcChhhhhHHHHHhCC
Confidence 57999999999998887763
No 203
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=38.37 E-value=28 Score=27.25 Aligned_cols=19 Identities=26% Similarity=0.284 Sum_probs=16.6
Q ss_pred EEEEcChHHHHHHHHhhcc
Q psy3087 25 TLMGHGTGASLANILAVSP 43 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~~ 43 (192)
.++|-|+||.+|++++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 8999999999999987653
No 204
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=37.95 E-value=50 Score=27.62 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=19.1
Q ss_pred CCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 18 GGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 18 g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|..++ .|.|-||||.+|+.++...
T Consensus 99 gl~p~--vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 99 NLLPR--IISGSSAGSIVAAILCTHT 122 (421)
T ss_pred CCCCC--EEEEECHHHHHHHHHHcCC
Confidence 45554 7999999999999888743
No 205
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=37.63 E-value=50 Score=25.24 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=17.3
Q ss_pred EEEEEcChHHHHHHHHhhcc
Q psy3087 24 ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~~ 43 (192)
-.+.|-|||+..+++++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 38999999999999888754
No 206
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=36.94 E-value=8 Score=29.08 Aligned_cols=15 Identities=27% Similarity=0.519 Sum_probs=12.4
Q ss_pred cEEEEEcChHHHHHH
Q psy3087 23 RITLMGHGTGASLAN 37 (192)
Q Consensus 23 ~i~v~G~SAGg~la~ 37 (192)
-+..+|+|||++++.
T Consensus 118 G~~YiG~SAGA~ia~ 132 (224)
T COG3340 118 GTPYIGWSAGANIAG 132 (224)
T ss_pred CCceEEeccCceeec
Confidence 367899999999775
No 207
>KOG3975|consensus
Probab=36.91 E-value=48 Score=25.85 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=23.7
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-|.+|+++. -.-.||.++|||-|+-+.....-.
T Consensus 98 KlaFik~~~----Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 98 KLAFIKEYV----PKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHHHHHHhC----CCCCEEEEEecchhHHHHHHHhhh
Confidence 344555554 344789999999999988776654
No 208
>KOG2551|consensus
Probab=36.89 E-value=49 Score=25.14 Aligned_cols=34 Identities=32% Similarity=0.477 Sum_probs=25.3
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
.+|.+|.+.+.+-| .- =-|.|+|-||.|+++++.
T Consensus 90 esl~yl~~~i~enG-PF--DGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 90 ESLEYLEDYIKENG-PF--DGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHHHhC-CC--ccccccchhHHHHHHhhc
Confidence 46777777776643 32 257899999999998876
No 209
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=35.70 E-value=96 Score=19.29 Aligned_cols=35 Identities=20% Similarity=0.465 Sum_probs=20.9
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
.-+.+++++..- . .|.++.|.|-|.|=-||+-.+.
T Consensus 25 ~qI~yvk~~~~~-~-GpK~VLViGaStGyGLAsRIa~ 59 (78)
T PF12242_consen 25 NQIEYVKSQGKI-N-GPKKVLVIGASTGYGLASRIAA 59 (78)
T ss_dssp HHHHHHHHC----T-S-SEEEEES-SSHHHHHHHHHH
T ss_pred HHHHHHHhcCCC-C-CCceEEEEecCCcccHHHHHHH
Confidence 345677765443 2 3789999999999777754443
No 210
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=35.11 E-value=33 Score=27.37 Aligned_cols=18 Identities=33% Similarity=0.315 Sum_probs=16.1
Q ss_pred EEEEcChHHHHHHHHhhc
Q psy3087 25 TLMGHGTGASLANILAVS 42 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~ 42 (192)
.|+|-|+||.+|++++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 799999999999998863
No 211
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=34.83 E-value=33 Score=27.15 Aligned_cols=17 Identities=41% Similarity=0.532 Sum_probs=15.4
Q ss_pred EEEEcChHHHHHHHHhh
Q psy3087 25 TLMGHGTGASLANILAV 41 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~ 41 (192)
.|+|-|+||.+|++++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 68999999999999875
No 212
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=34.78 E-value=45 Score=26.23 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=17.4
Q ss_pred hhhC--CCCCcEEEEEcChHHHHH
Q psy3087 15 HAFG--GDPDRITLMGHGTGASLA 36 (192)
Q Consensus 15 ~~~g--~d~~~i~v~G~SAGg~la 36 (192)
+.++ .++++++++|||+|+.-+
T Consensus 203 ~~~~~~~~~~~vI~vGDs~~Dl~m 226 (277)
T TIGR01544 203 EYFNQLKDRSNIILLGDSQGDLRM 226 (277)
T ss_pred HHhCccCCcceEEEECcChhhhhH
Confidence 3445 688899999999998654
No 213
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=34.24 E-value=59 Score=25.93 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 4 VAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 4 ~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+|+=..+...+| ..+.+.|+|+|-||+-+-.++..
T Consensus 35 ~~fL~~Ff~~~p~~--~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 35 HEFLQKWLSRHPQY--FSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred HHHHHHHHHhCccc--ccCCeEEEeeccccchHHHHHHH
Confidence 34444333333443 34569999999999976666544
No 214
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=34.17 E-value=32 Score=27.30 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=20.9
Q ss_pred CCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 19 GDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 19 ~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
-++++-+|+|+|-||-.+.+.++..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~ 198 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRH 198 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcC
Confidence 4567789999999999998887753
No 215
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=33.67 E-value=37 Score=28.26 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=16.5
Q ss_pred EEEEcChHHHHHHHHhhcc
Q psy3087 25 TLMGHGTGASLANILAVSP 43 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~~ 43 (192)
.|.|-||||.+++.++...
T Consensus 98 iI~GtSAGAivaalla~~t 116 (407)
T cd07232 98 VISGTSGGSLVAALLCTRT 116 (407)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 5999999999999988743
No 216
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.01 E-value=41 Score=25.05 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=22.7
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
+++.+.+. |... -.|.|-|+||..+++++...
T Consensus 16 vl~aL~e~----g~~~--d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEA----GIEP--DIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHc----CCCC--CEEEEECHHHHHHHHHHcCC
Confidence 45555554 3322 38899999999999988765
No 217
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.54 E-value=37 Score=25.99 Aligned_cols=18 Identities=33% Similarity=0.401 Sum_probs=16.3
Q ss_pred EEEEcChHHHHHHHHhhc
Q psy3087 25 TLMGHGTGASLANILAVS 42 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~ 42 (192)
.++|-|+||.+|++++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 689999999999998876
No 218
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=31.37 E-value=41 Score=20.17 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=17.6
Q ss_pred hhhhCCCCCcEEEEEcC-hHHHHHH
Q psy3087 14 LHAFGGDPDRITLMGHG-TGASLAN 37 (192)
Q Consensus 14 ~~~~g~d~~~i~v~G~S-AGg~la~ 37 (192)
+..++.+++++++.||| .-...++
T Consensus 14 ~~~~~~~~~~~~~VGD~~~~Di~~a 38 (75)
T PF13242_consen 14 LKRLGVDPSRCVMVGDSLETDIEAA 38 (75)
T ss_dssp HHHHTSGGGGEEEEESSTTTHHHHH
T ss_pred HHHcCCCHHHEEEEcCCcHhHHHHH
Confidence 34568899999999999 5444433
No 219
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=31.10 E-value=61 Score=24.56 Aligned_cols=26 Identities=19% Similarity=0.418 Sum_probs=20.3
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGA 33 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg 33 (192)
.|++|+.++ +|.++++++.+|||---
T Consensus 170 ~al~~l~~~---~~i~~~~~i~~GD~~ND 195 (249)
T TIGR01485 170 QALQYLLQK---LAMEPSQTLVCGDSGND 195 (249)
T ss_pred HHHHHHHHH---cCCCccCEEEEECChhH
Confidence 567777755 57889999999999654
No 220
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=30.61 E-value=50 Score=23.17 Aligned_cols=19 Identities=32% Similarity=0.212 Sum_probs=15.9
Q ss_pred CcEEEEEcChHHHHHHHHh
Q psy3087 22 DRITLMGHGTGASLANILA 40 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~ 40 (192)
.--.+.|-|||+..++.++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457889999999999887
No 221
>COG3730 SrlA Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]
Probab=30.04 E-value=16 Score=25.84 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=13.1
Q ss_pred ccCCCCC-CCccccCcCCC
Q psy3087 171 HHNFLED-GVQYYDASSSS 188 (192)
Q Consensus 171 ~~~~~~~-~~~~~~~~~~~ 188 (192)
-+|.+|. |+.|||+.+++
T Consensus 88 GrflpEk~KPafydaa~s~ 106 (176)
T COG3730 88 GRFLPEKYKPAFYDAAVSF 106 (176)
T ss_pred hccChhccCccHHHhhhhh
Confidence 4566665 89999987754
No 222
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=30.03 E-value=35 Score=26.05 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=13.9
Q ss_pred cEEEEEcChHHHHHHHHh
Q psy3087 23 RITLMGHGTGASLANILA 40 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~ 40 (192)
-+.++|.|||++++.-..
T Consensus 113 G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 113 GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred CCEEEEECHHHHhhhccc
Confidence 378999999998865433
No 223
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=29.98 E-value=94 Score=25.32 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=18.1
Q ss_pred CCCcEEEEEcChHHHHHHHHhhc
Q psy3087 20 DPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 20 d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..+.+.|+|+|-||+-+..++..
T Consensus 134 ~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 134 RSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp TTSEEEEEEETTHHHHHHHHHHH
T ss_pred cCCCEEEEccccccccchhhHHh
Confidence 34479999999999987766654
No 224
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.94 E-value=41 Score=27.87 Aligned_cols=24 Identities=33% Similarity=0.509 Sum_probs=19.1
Q ss_pred CCCCCcEEEEEcChHHHHHHHHhhcc
Q psy3087 18 GGDPDRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 18 g~d~~~i~v~G~SAGg~la~~~~~~~ 43 (192)
|.-|+ +|.|-|||+.+|+.++...
T Consensus 109 gl~p~--~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 109 GLLPR--IITGTATGALIAALVGVHT 132 (391)
T ss_pred CCCCc--eEEEecHHHHHHHHHHcCC
Confidence 44454 5999999999999999853
No 225
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=29.69 E-value=50 Score=25.80 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=17.0
Q ss_pred EEEEEcChHHHHHHHHhhcc
Q psy3087 24 ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~~ 43 (192)
=.|.|-|||+..++.++...
T Consensus 40 d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 40 DAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred cEEEEECHHHHHHHHHHcCC
Confidence 47899999999999988753
No 226
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=29.58 E-value=49 Score=26.34 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=22.6
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+|+.+.++ |+.+ =.|.|-||||.+++.++..
T Consensus 33 vL~aLee~----gi~~--d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEA----GIPV--DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHc----CCCC--CEEEEECHHHHHHHHHHcC
Confidence 45555555 4433 4789999999999998865
No 227
>COG0627 Predicted esterase [General function prediction only]
Probab=29.33 E-value=39 Score=27.07 Aligned_cols=22 Identities=32% Similarity=0.330 Sum_probs=18.6
Q ss_pred CcEEEEEcChHHHHHHHHhhcc
Q psy3087 22 DRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~~ 43 (192)
++..|+|+|.||+-|..+++..
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred CCceeEEEeccchhhhhhhhhC
Confidence 4899999999999888877653
No 228
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=28.99 E-value=1.4e+02 Score=25.95 Aligned_cols=41 Identities=24% Similarity=0.247 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 2 D~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
|+..|..-.-+.+.+.+-+..|.+|.|..-||-.+++++-.
T Consensus 120 DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~ 160 (581)
T PF11339_consen 120 DVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAAL 160 (581)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhc
Confidence 56667666667777777777799999999999988877653
No 229
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.93 E-value=50 Score=26.26 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=16.4
Q ss_pred EEEEcChHHHHHHHHhhcc
Q psy3087 25 TLMGHGTGASLANILAVSP 43 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~~ 43 (192)
.+.|-|||+..++.++...
T Consensus 100 ~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 100 VISGSSAGAIVAALLGTHT 118 (298)
T ss_pred EEEEEcHHHHHHHHHHcCC
Confidence 5999999999999988753
No 230
>PRK10279 hypothetical protein; Provisional
Probab=27.99 E-value=54 Score=26.04 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=22.8
Q ss_pred HHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 6 ALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 6 al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
+|+++.++ |..+ -.|.|-|+||..++.++..
T Consensus 23 VL~aL~E~----gi~~--d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 23 VINALKKV----GIEI--DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHHc----CCCc--CEEEEEcHHHHHHHHHHcC
Confidence 45555554 4444 5789999999999998864
No 231
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=27.76 E-value=41 Score=25.69 Aligned_cols=27 Identities=19% Similarity=0.393 Sum_probs=21.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGAS 34 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~ 34 (192)
.|++|+.++ +|+++++++.+|||---.
T Consensus 199 ~al~~l~~~---~gi~~~~v~afGD~~NDi 225 (270)
T PRK10513 199 TGVKSLAEH---LGIKPEEVMAIGDQENDI 225 (270)
T ss_pred HHHHHHHHH---hCCCHHHEEEECCchhhH
Confidence 577777765 588999999999996543
No 232
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.47 E-value=1e+02 Score=25.32 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=23.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
..|+.|.+.. ...+|.|++||.|.-+++...-.
T Consensus 179 ~~lr~La~~~-----~~~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 179 RLLRYLATDK-----PVKRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred HHHHHHHhCC-----CCceEEEEEecchHHHHHHHHHH
Confidence 3455555542 35789999999999988765543
No 233
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.47 E-value=57 Score=26.24 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=15.9
Q ss_pred EEEEcChHHHHHHHHhhc
Q psy3087 25 TLMGHGTGASLANILAVS 42 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~ 42 (192)
.|.|-|||+.+++.++..
T Consensus 99 ~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 99 VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 599999999999988874
No 234
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=27.04 E-value=1.1e+02 Score=22.40 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=25.7
Q ss_pred HHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 8 HWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 8 ~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
+||.+-.++...-++.+++.+||-|..+++-++-
T Consensus 45 dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~ 78 (181)
T COG3545 45 DWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAE 78 (181)
T ss_pred HHHHHHHHHHhccCCCeEEEEecccHHHHHHHHH
Confidence 5777766666656666999999999987776654
No 235
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=27.03 E-value=98 Score=24.93 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=17.2
Q ss_pred CcEEEEEcChHHHHHHHHhh
Q psy3087 22 DRITLMGHGTGASLANILAV 41 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~ 41 (192)
.+|.+.|||.||-.+..+.-
T Consensus 127 ~~v~LigHS~GG~~~ry~~~ 146 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLG 146 (336)
T ss_pred CceEEEeecccchhhHHHHh
Confidence 78999999999998886554
No 236
>cd03366 TOPRIM_TopoIIA_GyrB TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to the Escherichia coli GyrB subunit. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. DNA gyrase is more effective at relaxing supercoils than decatentating DNA. DNA gyrase in addition inserts negative supercoils in the presence of ATP. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleava
Probab=26.62 E-value=28 Score=23.38 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=9.7
Q ss_pred EEEEEcChHHHH
Q psy3087 24 ITLMGHGTGASL 35 (192)
Q Consensus 24 i~v~G~SAGg~l 35 (192)
+.+-||||||..
T Consensus 4 ~lvEGDSAggsa 15 (114)
T cd03366 4 YIVEGDSAGGSA 15 (114)
T ss_pred EEEeCCCCcccc
Confidence 578899999953
No 237
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=26.55 E-value=1.3e+02 Score=28.87 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=18.8
Q ss_pred CcEEEEEcChHHHHHHHHhhcc
Q psy3087 22 DRITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~~ 43 (192)
.++.++|+|.||.++..++...
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARL 1154 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHH
Confidence 4799999999999999887643
No 238
>COG3150 Predicted esterase [General function prediction only]
Probab=26.48 E-value=1.7e+02 Score=21.47 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHHHHhhc
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~~~~~~ 42 (192)
-..|++-+.+-+.+.+ |.+ +.|.|-|-||-.|..++..
T Consensus 42 p~~a~~ele~~i~~~~-~~~-p~ivGssLGGY~At~l~~~ 79 (191)
T COG3150 42 PQQALKELEKAVQELG-DES-PLIVGSSLGGYYATWLGFL 79 (191)
T ss_pred HHHHHHHHHHHHHHcC-CCC-ceEEeecchHHHHHHHHHH
Confidence 3456666666666654 333 9999999999988877653
No 239
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=25.90 E-value=76 Score=23.37 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGAS 34 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~ 34 (192)
.|++++.+ .+|.++++++.+|||--=.
T Consensus 189 ~ai~~l~~---~~~i~~~~~~~~GD~~ND~ 215 (254)
T PF08282_consen 189 SAIKYLLE---YLGISPEDIIAFGDSENDI 215 (254)
T ss_dssp HHHHHHHH---HHTTSGGGEEEEESSGGGH
T ss_pred HHHHHHhh---hcccccceeEEeecccccH
Confidence 46777774 4588999999999997654
No 240
>cd01030 TOPRIM_TopoIIA_like TOPRIM_TopoIIA_like: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to Saccharomyces cerevisiae Topoisomerase II. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleavage by topisomerases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=25.87 E-value=42 Score=22.59 Aligned_cols=15 Identities=27% Similarity=0.322 Sum_probs=11.6
Q ss_pred EEEEEcChHHHHHHH
Q psy3087 24 ITLMGHGTGASLANI 38 (192)
Q Consensus 24 i~v~G~SAGg~la~~ 38 (192)
+.+-||||||.....
T Consensus 4 ~lvEGDSA~gsak~g 18 (115)
T cd01030 4 ILVEGDSAGGSAKQG 18 (115)
T ss_pred EEEecCCcchhhhhh
Confidence 578899999975543
No 241
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.77 E-value=64 Score=24.88 Aligned_cols=20 Identities=15% Similarity=0.135 Sum_probs=16.6
Q ss_pred EEEEEcChHHHHHHHHhhcc
Q psy3087 24 ITLMGHGTGASLANILAVSP 43 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~~ 43 (192)
-.|.|-|||+..++.++...
T Consensus 34 ~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 46999999999999887643
No 242
>COG0328 RnhA Ribonuclease HI [DNA replication, recombination, and repair]
Probab=25.45 E-value=88 Score=22.26 Aligned_cols=25 Identities=24% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhhhhhCCCCCcEEEEEcChHH
Q psy3087 3 IVAALHWLRENLHAFGGDPDRITLMGHGTGA 33 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~i~v~G~SAGg 33 (192)
++.||+|+++ +.+..|.|.+||-=-
T Consensus 51 ~i~AL~~l~~------~~~~~v~l~tDS~yv 75 (154)
T COG0328 51 LIEALEALKE------LGACEVTLYTDSKYV 75 (154)
T ss_pred HHHHHHHHHh------cCCceEEEEecHHHH
Confidence 4567888877 467789999999643
No 243
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=25.21 E-value=59 Score=29.41 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=16.5
Q ss_pred EEEEcChHHHHHHHHhhcc
Q psy3087 25 TLMGHGTGASLANILAVSP 43 (192)
Q Consensus 25 ~v~G~SAGg~la~~~~~~~ 43 (192)
+|.|-||||..+++++...
T Consensus 69 ~iaGTSAGAInaa~lA~~~ 87 (739)
T TIGR03607 69 VISGTSAGGINGVLLAYAL 87 (739)
T ss_pred eEEeeCHHHHHHHHHHccc
Confidence 7899999999999888743
No 244
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=25.06 E-value=55 Score=24.53 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=20.1
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGAS 34 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~ 34 (192)
.|++|+.++ +|.+++.++.+|||.--.
T Consensus 162 ~al~~l~~~---~g~~~~~~i~~GD~~nD~ 188 (236)
T TIGR02471 162 LALRYLSYR---WGLPLEQILVAGDSGNDE 188 (236)
T ss_pred HHHHHHHHH---hCCCHHHEEEEcCCccHH
Confidence 466666664 678889999999996543
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=24.94 E-value=1.7e+02 Score=22.58 Aligned_cols=26 Identities=31% Similarity=0.533 Sum_probs=19.2
Q ss_pred hhhhCCCCCcEEEEEcChHHHHHHHHhh
Q psy3087 14 LHAFGGDPDRITLMGHGTGASLANILAV 41 (192)
Q Consensus 14 ~~~~g~d~~~i~v~G~SAGg~la~~~~~ 41 (192)
..++|+.|+ ++.|+|.|-..|++++-
T Consensus 76 l~~~Gi~p~--~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 76 WRSWGVRPD--AVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHcCCccc--EEEecCHHHHHHHHHhC
Confidence 356677774 89999999877766553
No 246
>PRK10976 putative hydrolase; Provisional
Probab=24.75 E-value=51 Score=25.13 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGA 33 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg 33 (192)
.||+|+.++ +|++++++..+|||---
T Consensus 193 ~al~~l~~~---lgi~~~~viafGD~~ND 218 (266)
T PRK10976 193 HALEAVAKK---LGYSLKDCIAFGDGMND 218 (266)
T ss_pred HHHHHHHHH---cCCCHHHeEEEcCCccc
Confidence 467777664 58999999999999654
No 247
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=24.66 E-value=31 Score=18.80 Aligned_cols=6 Identities=50% Similarity=0.396 Sum_probs=2.6
Q ss_pred cCCCCC
Q psy3087 185 SSSSSS 190 (192)
Q Consensus 185 ~~~~~~ 190 (192)
|+||||
T Consensus 32 VaPSSs 37 (46)
T PF02402_consen 32 VAPSSS 37 (46)
T ss_pred ECCCcc
Confidence 444443
No 248
>cd03365 TOPRIM_TopoIIA TOPRIM_TopoIIA: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to Saccharomyces cerevisiae Topoisomerase II. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). This glutamate and two aspartates, cluster together to form a highly acid surface patch. The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleavage by topisomerases. The DXD motif may co-ordinate Mg2+, a cofact
Probab=24.55 E-value=52 Score=22.34 Aligned_cols=16 Identities=25% Similarity=0.100 Sum_probs=12.2
Q ss_pred EEEEEcChHHHHHHHH
Q psy3087 24 ITLMGHGTGASLANIL 39 (192)
Q Consensus 24 i~v~G~SAGg~la~~~ 39 (192)
+.+-||||||.....-
T Consensus 4 flvEGDSA~gsak~gr 19 (120)
T cd03365 4 ILTEGDSAKALAVAGL 19 (120)
T ss_pred EEEeCCCchhhHHhhh
Confidence 5788999999865543
No 249
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=24.43 E-value=52 Score=25.27 Aligned_cols=26 Identities=23% Similarity=0.253 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGA 33 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg 33 (192)
.||+|+.++ +|++++++..+|||--=
T Consensus 191 ~al~~l~~~---~gi~~~~v~afGD~~ND 216 (272)
T PRK15126 191 AALAVLSQH---LGLSLADCMAFGDAMND 216 (272)
T ss_pred HHHHHHHHH---hCCCHHHeEEecCCHHH
Confidence 467777664 68999999999998553
No 250
>PF12980 DUF3864: Domain of Unknown Function with PDB structure (DUF3864); InterPro: IPR024335 This entry represents a functionally uncharacterised domain found in bacterial sequences. The structure of one of the sequences, A6LGL1 from SWISSPROT from Parabacteroides distasonis atcc 8503, has been determined.; PDB: 3LM3_A.
Probab=24.38 E-value=52 Score=19.92 Aligned_cols=42 Identities=21% Similarity=0.248 Sum_probs=22.9
Q ss_pred CCccccccCCccceEeCCcchhhhccccchhchHHHHHHhhc
Q psy3087 119 PFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLWLNLIPQLH 160 (192)
Q Consensus 119 ~~Wp~y~~~~~~~l~i~~~~~~~~~~~~~~~~fw~~~~p~l~ 160 (192)
..|.-.+..+++-+.-.+.+.....+..+..+|..+.||.|-
T Consensus 40 kdwsl~n~inqkglrpqd~pvll~~l~~~~q~li~kyyp~l~ 81 (82)
T PF12980_consen 40 KDWSLMNVINQKGLRPQDKPVLLSELSQEDQDLIRKYYPELF 81 (82)
T ss_dssp -B----SSB-TT--SGGGS-B-GGGS-HHHHHHHHHH-GGG-
T ss_pred cchHHHHHHhhccCCCcCcchHHHHHhHHHHHHHHHHhHHhc
Confidence 458777776666556666777777888888899999999873
No 251
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=24.33 E-value=52 Score=24.61 Aligned_cols=18 Identities=17% Similarity=0.294 Sum_probs=14.3
Q ss_pred CcEEEEEcChHHHHHHHH
Q psy3087 22 DRITLMGHGTGASLANIL 39 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~ 39 (192)
..+.++|.|||+++....
T Consensus 116 ~G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 116 GGVVIGGTSAGAAVMSDT 133 (217)
T ss_pred cCCEEEEccHHHHhhhhc
Confidence 347899999999986654
No 252
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=23.40 E-value=56 Score=24.19 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=22.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLA 36 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la 36 (192)
.|++|+.++ +|.+++++..+|||-.-.-.
T Consensus 160 ~al~~l~~~---~~i~~~~~i~~GD~~NDi~m 188 (230)
T PRK01158 160 TGLKKLAEL---MGIDPEEVAAIGDSENDLEM 188 (230)
T ss_pred HHHHHHHHH---hCCCHHHEEEECCchhhHHH
Confidence 567777765 67899999999999775433
No 253
>PF00432 Prenyltrans: Prenyltransferase and squalene oxidase repeat This Prosite family is a subset of the Pfam family.; InterPro: IPR001330 The beta subunit of the farnesyltransferases is responsible for peptide binding. Squalene-hopene cyclase is a bacterial enzyme that catalyzes the cyclization of squalene into hopene, a key step in hopanoid (triterpenoid) metabolism []. Lanosterol synthase (5.4.99.7 from EC) (oxidosqualene-lanosterol cyclase) catalyzes the cyclization of (S)-2,3-epoxysqualene to lanosterol, the initial precursor of cholesterol, steroid hormones and vitamin D in vertebrates and of ergosterol in fungi []. Cycloartenol synthase () (2,3-epoxysqualene-cycloartenol cyclase) is a plant enzyme that catalyzes the cyclization of (S)-2,3-epoxysqualene to cycloartenol.; GO: 0003824 catalytic activity; PDB: 2IEJ_B 1LD7_B 1LD8_B 2H6G_B 1TN6_B 1S63_B 1MZC_B 2H6I_B 2H6F_B 1JCQ_B ....
Probab=23.01 E-value=89 Score=16.56 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=16.0
Q ss_pred ChHHHHHHHHHHhhh---hhCCCCCc
Q psy3087 1 MDIVAALHWLRENLH---AFGGDPDR 23 (192)
Q Consensus 1 ~D~~~al~wi~~~~~---~~g~d~~~ 23 (192)
+|..++++||..... .|++.++.
T Consensus 1 id~~~~~~~l~~~Q~~dGGf~~~~~~ 26 (44)
T PF00432_consen 1 IDVEKLIRFLLSCQNPDGGFGGRPGG 26 (44)
T ss_dssp SHHHHHHHHHHHTBBTTSSBBSSTTS
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCC
Confidence 578889999987754 34455555
No 254
>KOG4667|consensus
Probab=22.96 E-value=1.1e+02 Score=23.35 Aligned_cols=22 Identities=23% Similarity=0.605 Sum_probs=17.3
Q ss_pred CCcE--EEEEcChHHHHHHHHhhc
Q psy3087 21 PDRI--TLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i--~v~G~SAGg~la~~~~~~ 42 (192)
.+|+ +|.|||-||+.+..++.-
T Consensus 102 ~nr~v~vi~gHSkGg~Vvl~ya~K 125 (269)
T KOG4667|consen 102 SNRVVPVILGHSKGGDVVLLYASK 125 (269)
T ss_pred CceEEEEEEeecCccHHHHHHHHh
Confidence 4554 789999999998887754
No 255
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=22.88 E-value=1.1e+02 Score=25.85 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.0
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.++|.+.|.+.||+++++++..
T Consensus 180 ~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred ccccceeeEecchHHHHHHHHh
Confidence 4689999999999988766544
No 256
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.87 E-value=1.3e+02 Score=23.80 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=19.0
Q ss_pred cEEEEEcChHHHHHHHHhhcccc
Q psy3087 23 RITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
--+|.|-|+|+..++.++.....
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCCCh
Confidence 36889999999999999886543
No 257
>PF11312 DUF3115: Protein of unknown function (DUF3115); InterPro: IPR021463 This eukaryotic family of proteins has no known function.
Probab=22.75 E-value=1.8e+02 Score=23.40 Aligned_cols=21 Identities=33% Similarity=0.480 Sum_probs=18.3
Q ss_pred CcEEEEEcChHHHHHHHHhhc
Q psy3087 22 DRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+|..+|--|||-+++..++.
T Consensus 88 ~~VlCIGGGAGAElVAlAa~~ 108 (315)
T PF11312_consen 88 LRVLCIGGGAGAELVALAAAF 108 (315)
T ss_pred ceEEEECCChHHHHHHHHHHH
Confidence 589999999999999887766
No 258
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=22.69 E-value=98 Score=22.47 Aligned_cols=28 Identities=14% Similarity=0.160 Sum_probs=21.5
Q ss_pred HhhhhhCCCCCcEEEEEcChHHHHHHHH
Q psy3087 12 ENLHAFGGDPDRITLMGHGTGASLANIL 39 (192)
Q Consensus 12 ~~~~~~g~d~~~i~v~G~SAGg~la~~~ 39 (192)
.-++.++.+++++.++|||..+..++..
T Consensus 149 ~~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 149 LAAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred HHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 3456678889999999999887766643
No 259
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=22.34 E-value=64 Score=23.85 Aligned_cols=18 Identities=17% Similarity=0.298 Sum_probs=14.6
Q ss_pred CcEEEEEcChHHHHHHHH
Q psy3087 22 DRITLMGHGTGASLANIL 39 (192)
Q Consensus 22 ~~i~v~G~SAGg~la~~~ 39 (192)
+...+.|.|||+.+..-.
T Consensus 113 ~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 113 RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred cCCeEEEcCHHHHHhhhc
Confidence 357999999999877654
No 260
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=22.21 E-value=1.8e+02 Score=26.39 Aligned_cols=39 Identities=33% Similarity=0.533 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhhhCCCCC-----cEEE---------EEcChHHHHHHHHhh
Q psy3087 3 IVAALHWLRENLHAFGGDPD-----RITL---------MGHGTGASLANILAV 41 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~-----~i~v---------~G~SAGg~la~~~~~ 41 (192)
+.+|+-|++.++.++|++++ .|.| -|=|||-.++.++.-
T Consensus 640 a~~A~s~vrs~a~~~~i~~~~fek~dIHiHVPeGAtPKDGPSAGitm~TAlvS 692 (782)
T COG0466 640 AQAALSYVRSRAEKLGIDPDFFEKRDIHIHVPEGATPKDGPSAGITMATALVS 692 (782)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccceEEECCCCCCCCCCcchHHHHHHHHHH
Confidence 45799999999999999863 3433 388999888776543
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=21.97 E-value=1.3e+02 Score=23.10 Aligned_cols=25 Identities=32% Similarity=0.300 Sum_probs=17.7
Q ss_pred hhhhC-CCCCcEEEEEcChHHHHHHHHh
Q psy3087 14 LHAFG-GDPDRITLMGHGTGASLANILA 40 (192)
Q Consensus 14 ~~~~g-~d~~~i~v~G~SAGg~la~~~~ 40 (192)
..++| +.| -.+.|+|.|-..|+.++
T Consensus 76 l~~~g~i~p--~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 76 LKEQGGLKP--DFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHcCCCCC--CEEeecCHHHHHHHHHh
Confidence 34455 555 58999999987666655
No 262
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=21.92 E-value=82 Score=24.25 Aligned_cols=26 Identities=19% Similarity=0.387 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhhhCC---CCCcEEEEEcChHH
Q psy3087 5 AALHWLRENLHAFGG---DPDRITLMGHGTGA 33 (192)
Q Consensus 5 ~al~wi~~~~~~~g~---d~~~i~v~G~SAGg 33 (192)
.|++++.++ +|+ +++++..+|||-.=
T Consensus 190 ~al~~l~~~---lgi~~~~~~~viafGDs~ND 218 (271)
T PRK03669 190 QAANWLIAT---YQQLSGTRPTTLGLGDGPND 218 (271)
T ss_pred HHHHHHHHH---HHhhcCCCceEEEEcCCHHH
Confidence 577888776 466 99999999999654
No 263
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=21.84 E-value=64 Score=23.74 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=22.5
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChHHHHHH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTGASLAN 37 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAGg~la~ 37 (192)
.+++|+.++ +|.+++++..+|||..-....
T Consensus 150 ~~i~~l~~~---~~i~~~~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 150 VGVEKLKEL---LGIKPEEVAAIGDSENDIDLF 179 (215)
T ss_pred HHHHHHHHH---hCCCHHHEEEECCCHHHHHHH
Confidence 467777654 678889999999998755443
No 264
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=21.76 E-value=1.8e+02 Score=21.93 Aligned_cols=19 Identities=21% Similarity=0.588 Sum_probs=16.3
Q ss_pred cEEEEEcChHHHHHHHHhh
Q psy3087 23 RITLMGHGTGASLANILAV 41 (192)
Q Consensus 23 ~i~v~G~SAGg~la~~~~~ 41 (192)
+|=|.|||.|+.++-.+..
T Consensus 76 kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp -EEEEEETCHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHH
Confidence 9999999999999887765
No 265
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=21.75 E-value=83 Score=26.01 Aligned_cols=19 Identities=16% Similarity=0.400 Sum_probs=16.0
Q ss_pred EEEEEcChHHHHHHHHhhc
Q psy3087 24 ITLMGHGTGASLANILAVS 42 (192)
Q Consensus 24 i~v~G~SAGg~la~~~~~~ 42 (192)
-.|.|-|||+..+++++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3589999999999988765
No 266
>PRK10787 DNA-binding ATP-dependent protease La; Provisional
Probab=21.58 E-value=1.1e+02 Score=27.96 Aligned_cols=43 Identities=28% Similarity=0.356 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhhhhCCCCCc-----EE---------EEEcChHHHHHHHHhhcccc
Q psy3087 3 IVAALHWLRENLHAFGGDPDR-----IT---------LMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 3 ~~~al~wi~~~~~~~g~d~~~-----i~---------v~G~SAGg~la~~~~~~~~~ 45 (192)
+..|+.|++.++..++++++. |. .-|-|||-.++.++.-....
T Consensus 638 ~~~A~~~~~~~~~~~~~~~~~~~~~Di~i~v~~g~~~~dgpsagla~~~Al~S~~~~ 694 (784)
T PRK10787 638 IQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTG 694 (784)
T ss_pred HHHHHHHHHHHHHHcCCCcccccCceEEEEecCCCCCCCCCchHHHHHHHHHHHhhC
Confidence 356999999999999887532 22 24678988777665544333
No 267
>KOG4178|consensus
Probab=21.55 E-value=1.2e+02 Score=24.45 Aligned_cols=25 Identities=32% Similarity=0.250 Sum_probs=21.8
Q ss_pred CCcEEEEEcChHHHHHHHHhhcccc
Q psy3087 21 PDRITLMGHGTGASLANILAVSPVA 45 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~~~~ 45 (192)
.+|+++.||.-||.+|..+++...+
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Pe 136 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPE 136 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChh
Confidence 7899999999999999999886533
No 268
>PF15225 IL32: Interleukin 32
Probab=21.17 E-value=51 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=13.3
Q ss_pred hccCCCCCCCccccCCCCCCCccccCc
Q psy3087 159 LHRPGVEDLSMRHHNFLEDGVQYYDAS 185 (192)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (192)
.+|+++.++--..---+++.++|||.|
T Consensus 17 gnRspvp~~EDp~te~~eP~Esf~dkv 43 (104)
T PF15225_consen 17 GNRSPVPDVEDPATEVWEPGESFCDKV 43 (104)
T ss_pred cCCCCCCCCCCcccccCCcchhHHHHH
Confidence 334555443333333456667777643
No 269
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=20.92 E-value=67 Score=24.49 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=20.2
Q ss_pred HHHHHHHHhhhhhCCCCCcEEEEEcChH
Q psy3087 5 AALHWLRENLHAFGGDPDRITLMGHGTG 32 (192)
Q Consensus 5 ~al~wi~~~~~~~g~d~~~i~v~G~SAG 32 (192)
.|++++.+ .+|.+++.+..+|||.-
T Consensus 192 ~al~~l~~---~lgi~~~~v~afGD~~N 216 (264)
T COG0561 192 YALQRLAK---LLGIKLEEVIAFGDSTN 216 (264)
T ss_pred HHHHHHHH---HhCCCHHHeEEeCCccc
Confidence 57777776 56888899999999965
No 270
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=20.88 E-value=59 Score=25.05 Aligned_cols=15 Identities=33% Similarity=0.434 Sum_probs=12.5
Q ss_pred EEEEEcChHHHHHHH
Q psy3087 24 ITLMGHGTGASLANI 38 (192)
Q Consensus 24 i~v~G~SAGg~la~~ 38 (192)
..++|.|||+++..-
T Consensus 117 ~vi~G~SAGA~i~~~ 131 (250)
T TIGR02069 117 IILGGTSAGAAVMSD 131 (250)
T ss_pred CeEEEccHHHHhccc
Confidence 789999999986643
No 271
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=20.66 E-value=1.1e+02 Score=25.75 Aligned_cols=22 Identities=9% Similarity=0.229 Sum_probs=16.9
Q ss_pred CCcEEEEEcChHHHHHHHHhhc
Q psy3087 21 PDRITLMGHGTGASLANILAVS 42 (192)
Q Consensus 21 ~~~i~v~G~SAGg~la~~~~~~ 42 (192)
.+.+.|+|+|-||+-+-.++..
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred CCCEEEEccCccceehHHHHHH
Confidence 3569999999999966665543
Done!