RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3087
(192 letters)
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 116 bits (291), Expect = 1e-30
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 51 RTGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTP-- 108
+ G++VPYVLG+P++ FP N+S D +S ++ Y NFA+ GDPN P P
Sbjct: 450 WADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQD 509
Query: 109 ---PASLDPNHQVPFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLWLNLIPQLHRPGVE 165
+ + W Y +QLYL +G K ++ HYR +K++LWL L+P LH +
Sbjct: 510 TKFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHN--LN 567
Query: 166 DLSMRHH 172
D HH
Sbjct: 568 DHHHHHH 574
Score = 74.4 bits (183), Expect = 4e-16
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45
+D++ AL W EN+ FGGDP RIT+ G G G S N+L +S +
Sbjct: 190 LDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS 234
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 98.6 bits (246), Expect = 2e-24
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 52 TGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPAS 111
G + G ++ +V GLPLV NY+ ++ A+S++++HY A FA+ G+PN P
Sbjct: 436 MGVIHGYEIEFVFGLPLVK-----ELNYTAEEEALSRRIMHYWATFAKTGNPNEPHS--- 487
Query: 112 LDPNHQVPFWDTYDSINQLYLELGSK-TEIRNHYRGHKMSLWLNLIPQLHR 161
Q W + + Q +++L ++ ++ R W +P+L
Sbjct: 488 -----QESKWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLN 533
Score = 75.5 bits (186), Expect = 2e-16
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+D AL W+ +N+ FGGDP +T+ G G + + +SP ++
Sbjct: 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRD 217
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 96.7 bits (241), Expect = 7e-24
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 51 RTGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPA 110
G G ++ ++ GLPL NY+ ++ +++L+ Y NFAR GDPN P
Sbjct: 442 WMGVPHGYEIEFIFGLPL-----DPSLNYTTEERIFAQRLMKYWTNFARTGDPNDPR--- 493
Query: 111 SLDPNHQVPFWDTYDSINQLYLELGSKT-EIRNHYRGHKMSLWLNLIPQLHR 161
+ + P W Y + Q Y+ L K E+R R + W +P+L
Sbjct: 494 ----DSKSPQWPPYTTAAQQYVSLNLKPLEVRRGLRAQTCAFWNRFLPKLLS 541
Score = 75.5 bits (186), Expect = 2e-16
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+D AL W++EN+ AFGGDP +TL G GA+ + +S ++
Sbjct: 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 96.4 bits (240), Expect = 1e-23
Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 19/115 (16%)
Query: 52 TGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPAS 111
G + G+++ Y G PL + Y + + K+++ + FA+ G+P
Sbjct: 476 MGVLHGDEIEYFFGQPLNN-----SLQYRPVERELGKRMLSAVIEFAKTGNPAQDGEE-- 528
Query: 112 LDPNHQVPFWDTYDSINQLYLELGSKTEIRNHYRG---HKMSLWLNLIPQLHRPG 163
W + + +Y + +I RG + S W + +P++
Sbjct: 529 ---------WPNFSKEDPVYYIFSTDDKIEKLARGPLAARCSFWNDYLPKVRSWA 574
Score = 79.9 bits (197), Expect = 5e-18
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
D A+ WL++N HAFGG+P+ +TL G G+S N +SPV +G
Sbjct: 209 WDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRG 255
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 94.4 bits (235), Expect = 5e-23
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 52 TGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPAS 111
G + G ++ +V GLPL Y+ + +S+ ++ ANFA+ G+P
Sbjct: 434 MGVMHGYEIEFVFGLPL-----ERRDQYTKAEEILSRSIVKRWANFAKYGNPQ------- 481
Query: 112 LDPNHQVPFWDTYDSINQLYLELGSK-TEIRNHYRGHKMSLWLNLIPQL 159
+ +Q W + S Q YL L ++ T I R + W + P++
Sbjct: 482 -ETQNQSTSWPVFKSTEQKYLTLNTESTRIMTKLRAQQCRFWTSFFPKV 529
Score = 74.3 bits (183), Expect = 5e-16
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
D AL W+++N+ AFGG+P +TL G GA+ ++ +SP +
Sbjct: 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHS 215
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 90.5 bits (225), Expect = 1e-21
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
G+++ V G P F S+++ +SK ++ + ANFAR G+PNG
Sbjct: 450 GDELFSVFGAP------FLKEGASEEEIRLSKMVMKFWANFARNGNPNGEG--------- 494
Query: 117 QVPFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLWLNLIPQL 159
+P W Y+ + YL++G+ T+ + +++ W NL +
Sbjct: 495 -LPHWPEYNQ-KEGYLQIGANTQAAQKLKDKEVAFWTNLFAKK 535
Score = 73.6 bits (181), Expect = 9e-16
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+D VAAL W+++N+ +FGG+P +T+ G G ++L +SP+AK
Sbjct: 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKN 220
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 90.1 bits (224), Expect = 2e-21
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
+D+ YV G P P Y QD +SK +I Y NFAR GDPN +
Sbjct: 436 ADDLQYVFGKPF-----ATPLGYRAQDRTVSKAMIAYWTNFARTGDPNTGHSTVPAN--- 487
Query: 117 QVPFWDTYDSINQLYLELGSK---TEIRNHYRGHKMSLWLNLIPQLHR 161
WD Y + YLE+ + ++ H R + + W L
Sbjct: 488 ----WDPYTLEDDNYLEINKQMDSNSMKLHLRTNYLQFWTQTYQALPT 531
Score = 73.9 bits (182), Expect = 7e-16
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
D A+ W++ N+ AFGGDPD+ITL G G + ++ +SP KG
Sbjct: 165 WDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKG 211
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 76.2 bits (188), Expect = 1e-16
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 9/104 (8%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
++P + G G +Y +AAI +HY +F + +PN +
Sbjct: 425 TFELPAIFGAGST-GTLSSDSSYLTYNAAIIPVTMHYFISFVQTLNPNTYRYATA----- 478
Query: 117 QVPFWDTYDSINQLYLELG-SKTEIRNHYRGHKMSLWLNLIPQL 159
P W+T+ + +L L+ + E + W +L +
Sbjct: 479 --PEWNTWGNGQRLRLQTNDTAMEAVPESSLQDCAFWKSLTVPM 520
Score = 59.7 bits (145), Expect = 5e-11
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGK 48
+D AL W+++ + FGGDPD I + G GA + K +
Sbjct: 165 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDE 212
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 74.2 bits (183), Expect = 4e-16
Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
++P+V G L +D+ +S + FA+ G+P+
Sbjct: 400 ALELPFVFG-NLDGLERMAKAEITDEVKQLSHTIQSAWITFAKTGNPSTEAVN------- 451
Query: 117 QVPFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLWL 153
W Y + + L S+ I N K
Sbjct: 452 ----WPAYHEETRETVILDSEITIENDPESEKRQKLF 484
Score = 69.2 bits (170), Expect = 2e-14
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+D AAL W+REN+ AFGGDPD +T+ G G L P AKG
Sbjct: 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKG 206
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 72.7 bits (179), Expect = 2e-15
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Query: 41 VSPVAKGKCYRTGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARK 100
+PV G + + ++P+V G F + AI+ ++ + +FAR
Sbjct: 397 ETPVFGG---QLKACHALELPFVFHNLHQPGVANFV-GNRPEREAIANEMHYAWLSFART 452
Query: 101 GDPNGPTPPASLDPNHQVPFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLW 152
GDPNG P W Y + + + + + + G + + W
Sbjct: 453 GDPNGAHLP---------EAWPAYTNERKAAFVFSAASHVEDDPFGRERAAW 495
Score = 70.8 bits (174), Expect = 7e-15
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+D VAAL W++EN+ AFGGDPD IT+ G GA+ +L P A G
Sbjct: 165 LDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASG 211
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 69.3 bits (170), Expect = 3e-14
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
D+V L W++ N H FGG PD +TLMG GA+ +IL++S A G
Sbjct: 176 DMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADG 221
Score = 66.2 bits (162), Expect = 3e-13
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 16/103 (15%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
ED+ YV + G D+D + + +I NF + +P
Sbjct: 450 IEDLTYVFRTNSMLG-GHASFPPHDKDDHMKYWMTSFITNFMKYSNPVTDAKL------- 501
Query: 117 QVPFWDTYDSINQLYLELGSKTEIRN----HYRGHKMSLWLNL 155
W + N Y ++ + +N + + + ++
Sbjct: 502 ----WPEVRADNLRYQDIDTPDVYQNVKPHSEQRDMLDFFDSI 540
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 59.0 bits (143), Expect = 8e-11
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGAS------LANILAVSPVAKG 47
D + W+ +N+ FGGDP ++T+ G G+ + N + K
Sbjct: 180 KDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKP 232
Score = 50.5 bits (121), Expect = 6e-08
Identities = 14/109 (12%), Positives = 25/109 (22%), Gaps = 30/109 (27%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
D+ + L + S + FA DPN
Sbjct: 450 ANDIVWQDYLL----------------GSGSVIYNNAFIAFATDLDPNTAG--------- 484
Query: 117 QVPFWDTYDSINQLYLEL-----GSKTEIRNHYRGHKMSLWLNLIPQLH 160
+ W Y S +Q L ++++R +
Sbjct: 485 LLVNWPKYTSSSQSGNNLMMINALGLYTGKDNFRTAGYDALMTNPSSFF 533
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 58.6 bits (142), Expect = 1e-10
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGAS------LANILAVSPVAKG 47
D L W+ +N+ FGGDPD++ + G GA +A + K
Sbjct: 188 HDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKK 240
Score = 55.1 bits (133), Expect = 2e-09
Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 27/103 (26%)
Query: 57 GEDVPYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNH 116
G ++ + + + + + Y +FA DPN T
Sbjct: 464 GNELIFQFNVNI----------------GPANSYLRYFISFANHHDPNVGTN-------- 499
Query: 117 QVPFWDTYDSINQLYLELG--SKTEIRNHYRGHKMSLWLNLIP 157
+ WD Y + LE+ + YR +S + +
Sbjct: 500 -LLQWDQYTDEGKEMLEIHMTDNVMRTDDYRIEGISNFETDVN 541
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 52.5 bits (126), Expect = 1e-08
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 2/105 (1%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDV 60
+ A + W+ A D RI L G G + R +
Sbjct: 88 QQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQ 147
Query: 61 PY--VLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDP 103
+LG P++D FP + ++ + +
Sbjct: 148 HAAIILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPASK 192
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 46.4 bits (110), Expect = 1e-06
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV---SPVAKGKCYRTGSVRG 57
+D+ A++ LR++ + DP +IT G G + + + VA ++
Sbjct: 103 LDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKP 162
Query: 58 EDVPYVLGLPLVDGGPFFPHNYS 80
+V VLG P++ FP + +
Sbjct: 163 NNV--VLGYPVISPLLGFPKDDA 183
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 45.7 bits (109), Expect = 2e-06
Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 20/112 (17%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDVP 61
+ VA + ++ + + ++I G GA LA LA + + +
Sbjct: 140 ETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLA--LASALWLRD--------KHIRCG 189
Query: 62 YVLGL---PLVDGGPFFP--HNYSDQDAAISKQLI-----HYIANFARKGDP 103
V+ + + G + ++++ + Y+ N + P
Sbjct: 190 NVIAILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESP 241
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 43.8 bits (104), Expect = 1e-05
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D AAL W+ + G DPDRI + G G +LA +++
Sbjct: 126 DAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVS 164
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 43.4 bits (103), Expect = 1e-05
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D A W+ +N G D +I + G G +LA + A
Sbjct: 129 DAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTA 167
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 43.4 bits (103), Expect = 1e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D + L W+ N G D R+ + G GA+LA LA
Sbjct: 138 DAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLA 176
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 43.4 bits (103), Expect = 2e-05
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D A W+ EN DP +I + G G +LA ++
Sbjct: 132 DCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVS 170
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 43.4 bits (103), Expect = 2e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D AL W+ E F DP RI + G G +LA + +
Sbjct: 127 DAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTS 165
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 42.6 bits (100), Expect = 2e-05
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVA 45
L+W+ + + +T GH GA L + + P
Sbjct: 134 QFTHFLNWIFD--YTEMTKVSSLTFAGHXAGAHLLAQILMRPNV 175
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 42.3 bits (100), Expect = 4e-05
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D AAL ++ + G DP RI + G G LA
Sbjct: 132 DCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTV 170
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 41.7 bits (98), Expect = 4e-05
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPV 44
++ A + +N + +P+++ L+G G LA S
Sbjct: 98 EEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQ 141
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 40.2 bits (94), Expect = 1e-04
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDVP 61
D+ A+ ++ I G +GA L+ ++A G G R P
Sbjct: 81 DVYASFDAIQSQY-----SNCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINTEP 135
Query: 62 YVLGLPLVDGGP 73
+
Sbjct: 136 FKTTNSYYAKIA 147
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 38.5 bits (89), Expect = 6e-04
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D V+ + L + I ++GH GA+ +
Sbjct: 99 DAVSNITRLVKE-----KGLTNINMVGHSVGATFIWQIL 132
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 38.9 bits (90), Expect = 7e-04
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 36/132 (27%)
Query: 4 VAALHWLRENLHAFGGDPDRITLMGHGTG-----ASLANIL----AVSPVAK-GKCYRTG 53
AA L+ G P T GH G ASLA+++ V V G +
Sbjct: 1741 KAAFEDLKSK----GLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVA 1796
Query: 54 SVRGEDVPYVLGLPLVDGGPFFP-------HNYSDQDAAISKQLIHYIANFARKGDPNGP 106
R E G+ ++ G ++ + L+ I N+ N
Sbjct: 1797 VPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLV-EIVNY------NV- 1848
Query: 107 TPPASLDPNHQV 118
N Q
Sbjct: 1849 -------ENQQY 1853
Score = 30.8 bits (69), Expect = 0.33
Identities = 27/194 (13%), Positives = 56/194 (28%), Gaps = 69/194 (35%)
Query: 39 LAVSPVAKGKCYRTGSVRGEDVPYVLGLPLVDGGPFFPHNYSDQDAAIS------KQLIH 92
L + + K + +G ++ L P P +Y IS QL H
Sbjct: 198 LIRTTLDAEKVFT----QGLNILEWLENP--SNTP--DKDYLLS-IPISCPLIGVIQLAH 248
Query: 93 YIANFARKGDPNGPTPPASLDPNH----------------QVPFWDTYDSINQLYLEL-- 134
Y+ A+ G TP + W+++ + + +
Sbjct: 249 YVV-TAKLL---GFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF 304
Query: 135 --GSKTEIRNHYRGHK----MSLWLNLI------------PQLHRPGVEDLSMRHHNFLE 176
G R ++ SL +++ P L + +L+ ++
Sbjct: 305 FIG--------VRCYEAYPNTSLPPSILEDSLENNEGVPSPML---SISNLTQEQ---VQ 350
Query: 177 DGVQYYDASSSSSS 190
D V ++ +
Sbjct: 351 DYVNKTNSHLPAGK 364
Score = 28.9 bits (64), Expect = 1.2
Identities = 32/167 (19%), Positives = 51/167 (30%), Gaps = 56/167 (33%)
Query: 11 RENLHAFGGDPDRITLM-GH------GTGASLANILAVSPVAKGKCYRTGSVRGED---V 60
+ N H G I+L+ G G SL + + K K G D +
Sbjct: 355 KTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGL--NLTLRKAKA-----PSGLDQSRI 407
Query: 61 PY--------VLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASL 112
P+ LP+ PF H I+K L+ +F +
Sbjct: 408 PFSERKLKFSNRFLPV--ASPFHSHLLVPASDLINKDLVKNNVSFN----------AKDI 455
Query: 113 DPNHQVPFWDTYDSINQLYLELGSKTEIRNHYRGHKMSLWLNLIPQL 159
Q+P +DT+D GS R S+ ++ +
Sbjct: 456 ----QIPVYDTFD---------GS------DLRVLSGSISERIVDCI 483
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 37.9 bits (88), Expect = 0.001
Identities = 7/46 (15%), Positives = 8/46 (17%), Gaps = 4/46 (8%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKG 47
+ L E L G G L L
Sbjct: 80 TLTETFQLLNEE----IIQNQSFGLCGRSAGGYLMLQLTKQLQTLN 121
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 37.7 bits (88), Expect = 0.001
Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 21/111 (18%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDVP 61
I L + +MG G+G +LA L+ + +P
Sbjct: 149 AIQRVYDQLVS-----EVGHQNVVVMGDGSGGALA--LSFVQSLLD--------NQQPLP 193
Query: 62 YVLGL--PLVD---GGPFFPHNYSDQDAAISKQLIHYIAN-FARKGDPNGP 106
L L P++D +QDA +S+ ++ I +A
Sbjct: 194 NKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDK 244
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 36.6 bits (85), Expect = 0.002
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 2 DIVAALHWLREN---LHAFGGDPDRITLMGHGTGASLANILAV 41
D + AL W++++ D +MG G ++A +
Sbjct: 138 DAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGL 180
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 35.7 bits (83), Expect = 0.005
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D AL W+ N F I + G G +LA + A
Sbjct: 143 DSFDALKWVYNNSEKF-NGKYGIAVGGDSAGGNLAAVTA 180
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 35.6 bits (82), Expect = 0.005
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
DI AA L + D I ++G G L+ +L
Sbjct: 84 DIKAAYDQLASLPYV---DAHSIAVVGLSYGGYLSALLT 119
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 35.6 bits (81), Expect = 0.008
Identities = 42/271 (15%), Positives = 75/271 (27%), Gaps = 100/271 (36%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS-----PVAKGKCYRTGSV 55
+ I+A +R+ H L I+ S P K + SV
Sbjct: 330 LSIIAES--IRD-------GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 56 RGEDV--PY-VLGL--------------------PLVDGGPFFPHNYS------------ 80
P +L L LV+ P S
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK-ESTISIPSIYLELKVKL 439
Query: 81 DQDAAISKQLI-HYIANFARKGDPNGPTPPASLDP---NH------QVPFWDTYDSINQL 130
+ + A+ + ++ HY N + D + PP LD +H + + +
Sbjct: 440 ENEYALHRSIVDHY--NIPKTFDSDDLIPP-YLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 131 YLE---LGSKTEIRN-------------------HYRGH------KMSLWLNLIPQ-LHR 161
+L+ L K IR+ Y+ + K +N I L +
Sbjct: 497 FLDFRFLEQK--IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPK 554
Query: 162 PGVEDLSMRHHNFL------EDGVQYYDASS 186
+ ++ + L ED + +A
Sbjct: 555 IEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
Score = 26.0 bits (56), Expect = 9.8
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 49/119 (41%)
Query: 63 VLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWD 122
L D P + + + + IA R G WD
Sbjct: 310 YLDCRPQD----LPR----EVLTTNPRRLSIIAESIRDG------------LAT----WD 345
Query: 123 TYDSIN--------QLYLELGSKTEIRNHYRGHKMS---------------LWLNLIPQ 158
+ +N + L + E R + ++S +W ++I
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFD--RLSVFPPSAHIPTILLSLIWFDVIKS 402
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Length = 223
Score = 34.9 bits (80), Expect = 0.010
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
+V A WL N ++ G TG A + A
Sbjct: 97 RLVGATDWLTHN---PDTQHLKVGYFGASTGGGAALVAA 132
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 34.7 bits (80), Expect = 0.011
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 2 DIVAALHWLREN--LHAFGGDPDRITLMGHGTGASLANILAV 41
D AL W+ + + G R+ L G +G ++A+ +AV
Sbjct: 167 DGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAV 208
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 34.6 bits (80), Expect = 0.013
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLA 36
D VAA L + G DRI + G G L
Sbjct: 133 DCVAAYRALLKT----AGSADRIIIAGDSAGGGLT 163
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 34.2 bits (79), Expect = 0.018
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41
D VAA WL + G P +++ G G L + V
Sbjct: 133 DGVAAYRWLLDQ----GFKPQHLSISGDSAGGGLVLAVLV 168
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 34.5 bits (79), Expect = 0.020
Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 32/120 (26%)
Query: 73 PFFPHNYSDQDAAISKQLIHYIANFARKGDPNGPTPPASLDPNHQVPFWDTYDSINQLYL 132
PF + D +A LI +I D D + +PF + +L
Sbjct: 537 PFNQGSKQDVEA-----LIEFI------YDTEKNGGLG-WDLDAIIPFAAIPEQGIEL-E 583
Query: 133 ELGSKTEIRNHYRGHKMSLW--LNLIPQL----------HRPG--VEDLSMRHHNFLEDG 178
+ SK+E H++ L L ++ + RP + +S H F DG
Sbjct: 584 HIDSKSEF-----AHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDG 638
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 34.0 bits (78), Expect = 0.021
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLA 36
D +AA+ W+ E+ + G + + G G +LA
Sbjct: 167 DCLAAVLWVDEHRESLGLSG--VVVQGESGGGNLA 199
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 33.1 bits (76), Expect = 0.046
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 2 DIVAALHWLREN--LHAFGGDPDRITLMGHGTGASLANILAV 41
D AL+W+ L + I L G +G ++A+ +A+
Sbjct: 168 DGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVAL 209
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D
structure, serine esterase, HYD aromatic hydrocarbons,
catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A*
1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A
1ggv_A*
Length = 236
Score = 30.7 bits (70), Expect = 0.22
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43
D+ AA+ + R ++ L+G+ G +LA ++A
Sbjct: 99 DLEAAIRYARHQ----PYSNGKVGLVGYSLGGALAFLVASKG 136
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 30.6 bits (69), Expect = 0.23
Identities = 8/42 (19%), Positives = 11/42 (26%), Gaps = 6/42 (14%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSP 43
I A+ + I L GH G L +
Sbjct: 115 QISQAVTAAAKE------IDGPIVLAGHSAGGHLVARMLDPE 150
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 30.4 bits (68), Expect = 0.30
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 2 DIVAALHWLRENLHAFGG-DPDRITLMGHGTGASLANILAVS 42
+++AL +L + D R+ +MGH G + A S
Sbjct: 102 QLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKS 143
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL
nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo
sapiens} PDB: 1zxn_A*
Length = 400
Score = 30.4 bits (69), Expect = 0.30
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 13 NLHA---FGGDPDRITLMGHGTGASLANIL 39
L + D ++T +G GA L NI
Sbjct: 116 QLLTSSNYDDDEKKVTGGRNGYGAKLCNIF 145
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich,
structural genomics, PSI-2, prote structure initiative;
1.74A {Klebsiella pneumoniae subsp}
Length = 241
Score = 29.6 bits (67), Expect = 0.53
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVS 42
D+ W + GGD R+ + G G + + A
Sbjct: 99 DLDHVASWAARH----GGDAHRLLITGFCWGGRITWLYAAH 135
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 29.4 bits (66), Expect = 0.68
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
+D + D DR+ +MG G L+ A
Sbjct: 182 LDTAQLAGIVMNMPEV---DEDRVGVMGPSQGGGLSLACA 218
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase;
2.10A {Thermus thermophilus HB27} PDB: 1wgz_A
Length = 509
Score = 29.4 bits (65), Expect = 0.76
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASL 35
+ L W R +HA G L+ TG +
Sbjct: 459 EFQPFLDWTRARIHAEGSRFRPRVLVERVTGEAP 492
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 29.2 bits (65), Expect = 0.82
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
A L+ L + D R+ L+G G + L+
Sbjct: 247 LHQAVLNELFSIPYV---DHHRVGLIGFRFGGNAMVRLS 282
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 28.8 bits (65), Expect = 0.92
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
+I+A + + ++ I + GH G + A
Sbjct: 85 NILAVVDYAKK-----LDFVTDIYMAGHSQGGLSVMLAA 118
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 29.1 bits (65), Expect = 0.94
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D V A+ D +RI + G G +A ++
Sbjct: 174 TDAVRAVEAAASFPQV---DQERIVIAGGSQGGGIALAVS 210
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 29.0 bits (64), Expect = 0.96
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
A+ ++ ++ I L+G GA + +A
Sbjct: 208 YFEEAVCYMLQHPQVK---GPGIGLLGISLGADICLSMA 243
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of
metallocarboxypept carboxypeptidase, hydrolase; 2.10A
{Trypanosoma cruzi}
Length = 505
Score = 29.1 bits (64), Expect = 0.98
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASL 35
D+ L E + G L+ TG +L
Sbjct: 454 DLGKILAKQNEKIWQHGSSLTTDELLRQATGETL 487
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.90A
{Bacteroides vulgatus atcc 8482}
Length = 391
Score = 29.1 bits (64), Expect = 1.1
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 15/102 (14%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA-VSPVAKGKCYRTGSVRGEDV 60
+ L+W++ + DRI + G G +L + Y + ++
Sbjct: 208 LDMQVLNWMKAQSYI---RKDRIVISGFSLGTEPMMVLGVLDKDIYAFVYNDFLCQTQER 264
Query: 61 PYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGD 102
V+ P + FP++ H I + R +
Sbjct: 265 AVVMTKPDKENRRPFPNSI-----------RHLIPGYWRYFN 295
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding,
metalloprotease, protease, zinc; 2.90A {Bacillus
subtilis}
Length = 501
Score = 28.6 bits (63), Expect = 1.2
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASL 35
+ WL E +H G + ++ TG L
Sbjct: 449 EFHPIKQWLTEKVHIHGKRKKPLDIIKDATGEEL 482
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.5 bits (63), Expect = 1.2
Identities = 8/44 (18%), Positives = 12/44 (27%), Gaps = 12/44 (27%)
Query: 32 GASLANILAVSPVAKGK--CYRTGSVRGEDVPYVLGLPLVDGGP 73
I V ++G C G V + + VD
Sbjct: 28 KVYPPKI--VERFSEGDVVCALCGLVLSDKL--------VDTRS 61
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural
genomics, PSI, structure initiative; 2.00A {Pseudomonas
aeruginosa}
Length = 367
Score = 28.5 bits (63), Expect = 1.4
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 21/127 (16%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAVSPVAKGKCYRTGSVRGEDVP 61
D AA+ ++ + +RI ++G +A + AV+ + V
Sbjct: 154 DFSAAVDFISLLPEV---NRERIGVIGICGWGGMA-LNAVA-------------VDKRVK 196
Query: 62 YVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGDPNG----PTPPASLDPNHQ 117
V+ + D Y+D + R D PP + +
Sbjct: 197 AVVTSTMYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGE 256
Query: 118 VPFWDTY 124
F Y
Sbjct: 257 AQFLVDY 263
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular
permutation, hydrolase; HET: NAG RB3; 1.66A
{Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Length = 318
Score = 28.3 bits (62), Expect = 1.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 14 LHAFGGDPDRITLMGHGTGASLANILAVS 42
L AF +P+ +++ G +G +A L V+
Sbjct: 3 LPAFNVNPNSVSVSGLASGGYMAAQLGVA 31
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase;
2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A
1ka4_A
Length = 499
Score = 28.3 bits (62), Expect = 1.5
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASL 35
+ WLRE +H +G L+ G +
Sbjct: 452 EFDPIKAWLREKIHRWGSIYPPKELLKKAIGEDM 485
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 28.6 bits (63), Expect = 1.6
Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41
A+++L + + L+G G L +A
Sbjct: 224 YFEEAMNYLLSHPEV---KGPGVGLLGISKGGELCLSMAS 260
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A
{Alicyclobacillus acidocaldarius}
Length = 343
Score = 28.2 bits (62), Expect = 1.6
Identities = 10/55 (18%), Positives = 14/55 (25%), Gaps = 1/55 (1%)
Query: 94 IANFARKGDPNGPTPPASLDPNHQVPFWDTYDSIN-QLYLELGSKTEIRNHYRGH 147
R T + V FWD D I+ Y + + R
Sbjct: 188 TIARVRTEYDGLVTYNCNHGREEHVRFWDAVDLISSSAYYPIDRWRDRVPVLREV 242
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 28.2 bits (63), Expect = 1.7
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
D A L++++ I L+GH G +A++LA
Sbjct: 104 DANAILNYVKT-----DPHVRNIYLVGHAQGGVVASMLA 137
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A
{Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB:
1qzr_A*
Length = 418
Score = 28.0 bits (63), Expect = 1.8
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 13 NLHA---FGGDPDRITLMG--HGTGASLANILAVSPVAKGKCYRTG 53
+L + D ++T G +G GA L NI + + + G
Sbjct: 128 HLLTSSNYDDDEKKVT--GGRNGYGAKLCNIFSTEFILETADLNVG 171
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 27.5 bits (61), Expect = 2.8
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 5/27 (18%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMG 28
D+ AA W RE+ G + +MG
Sbjct: 422 DVSAAARWARES-----GLASELYIMG 443
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 27.4 bits (60), Expect = 3.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 7 LHWLRENLHAFGGDPDRITLMGHGTGASLANILAV 41
L + L + + IT+ GH GA+LA + A
Sbjct: 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSAT 247
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 27.3 bits (60), Expect = 3.3
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 3/39 (7%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
A + L + D I ++G G + A A
Sbjct: 206 YTSAVVDLLTKLEAI---RNDAIGVLGRSLGGNYALKSA 241
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199,
PSI-2, PR structure initiative 2; 1.86A {Agrobacterium
tumefaciens str}
Length = 317
Score = 26.8 bits (60), Expect = 5.2
Identities = 6/45 (13%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 8 HWLRENLHAFGGDPDRITLMGHGTGASLA-------NILAVSPVA 45
+ E G + T + T + A ++A++ +
Sbjct: 69 EVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMD 113
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 26.7 bits (59), Expect = 5.8
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Query: 1 MDIVAALHWLRENLHAFGGDPDRITLMGHGTGASLANILA 40
+D V AL + D RI + G G L A
Sbjct: 155 LDAVRALEVISSFDEV---DETRIGVTGGSQGGGLTIAAA 191
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-biology; 2.30A {Bacteroides fragilis}
Length = 398
Score = 26.6 bits (58), Expect = 5.9
Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 15/102 (14%)
Query: 2 DIVAALHWLRENLHAFGGDPDRITLMGHGTGASLA-NILAVSPVAKGKCYRTGSVRGEDV 60
+ L+W++ H DRI + G G + + Y + ++
Sbjct: 213 LDMQVLNWMKTQKHI---RKDRIVVSGFSLGTEPMMVLGTLDTSIYAFVYNDFLCQTQER 269
Query: 61 PYVLGLPLVDGGPFFPHNYSDQDAAISKQLIHYIANFARKGD 102
V+ +P +G FP++ H I +F + +
Sbjct: 270 AEVMTMPDKNGRRPFPNSIR-----------HLIPDFWKNFN 300
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.138 0.435
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,207,900
Number of extensions: 189366
Number of successful extensions: 644
Number of sequences better than 10.0: 1
Number of HSP's gapped: 600
Number of HSP's successfully gapped: 98
Length of query: 192
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 104
Effective length of database: 4,244,745
Effective search space: 441453480
Effective search space used: 441453480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (24.9 bits)