Query psy3088
Match_columns 125
No_of_seqs 190 out of 1396
Neff 4.5
Searched_HMMs 29240
Date Sat Aug 17 01:21:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.3 1.2E-12 4.2E-17 85.6 2.3 42 1-60 32-73 (73)
2 2o37_A Protein SIS1; HSP40, J- 99.2 8.3E-12 2.8E-16 85.2 2.2 42 1-60 32-73 (92)
3 1hdj_A Human HSP40, HDJ-1; mol 99.1 2.1E-11 7.3E-16 80.2 3.1 42 1-60 27-70 (77)
4 2ej7_A HCG3 gene; HCG3 protein 99.1 2.7E-11 9.4E-16 80.4 3.0 42 1-60 33-78 (82)
5 2ctq_A DNAJ homolog subfamily 99.1 4E-11 1.4E-15 84.6 3.8 52 1-70 44-98 (112)
6 2ctp_A DNAJ homolog subfamily 99.1 3.6E-11 1.2E-15 79.2 2.7 42 1-60 31-74 (78)
7 2dn9_A DNAJ homolog subfamily 99.1 2.9E-11 9.9E-16 79.8 2.2 42 1-60 31-75 (79)
8 2cug_A Mkiaa0962 protein; DNAJ 99.1 3.8E-11 1.3E-15 81.2 2.4 42 1-60 41-84 (88)
9 2ctr_A DNAJ homolog subfamily 99.0 8E-11 2.7E-15 79.6 2.6 42 1-60 31-74 (88)
10 2ctw_A DNAJ homolog subfamily 99.0 8.3E-11 2.8E-15 82.7 2.6 42 1-60 41-85 (109)
11 2dmx_A DNAJ homolog subfamily 99.0 8.4E-11 2.9E-15 79.8 2.3 42 1-60 33-78 (92)
12 2lgw_A DNAJ homolog subfamily 99.0 1.1E-10 3.7E-15 81.2 2.5 42 1-60 26-71 (99)
13 2qsa_A DNAJ homolog DNJ-2; J-d 99.0 1.5E-10 5.1E-15 80.9 2.0 43 1-61 40-88 (109)
14 1bq0_A DNAJ, HSP40; chaperone, 99.0 6.6E-11 2.3E-15 82.1 0.1 43 1-61 27-72 (103)
15 2yua_A Williams-beuren syndrom 99.0 2.1E-10 7.3E-15 79.1 2.7 33 1-33 41-76 (99)
16 1wjz_A 1700030A21RIK protein; 99.0 2.2E-10 7.4E-15 77.6 2.6 33 1-33 40-81 (94)
17 3apq_A DNAJ homolog subfamily 99.0 1.5E-10 5.1E-15 86.1 1.9 42 1-60 26-70 (210)
18 2ys8_A RAB-related GTP-binding 98.9 3E-10 1E-14 77.4 2.4 35 1-35 51-87 (90)
19 1gh6_A Large T antigen; tumor 98.9 1E-10 3.6E-15 83.8 -0.2 33 1-34 34-66 (114)
20 2pf4_E Small T antigen; PP2A, 98.9 1.2E-10 4.1E-15 89.4 -0.9 40 1-59 37-76 (174)
21 1iur_A KIAA0730 protein; DNAJ 98.8 1E-09 3.5E-14 75.3 2.1 33 1-33 40-76 (88)
22 3lz8_A Putative chaperone DNAJ 98.8 6.8E-10 2.3E-14 91.5 0.0 33 1-33 52-86 (329)
23 1faf_A Large T antigen; J doma 98.7 1.7E-09 5.7E-14 72.4 0.9 33 1-34 37-69 (79)
24 2l6l_A DNAJ homolog subfamily 98.7 3.1E-09 1.1E-13 78.1 2.0 33 1-33 34-75 (155)
25 3uo3_A J-type CO-chaperone JAC 98.7 1.2E-09 4.2E-14 83.5 -1.3 33 1-33 42-74 (181)
26 1fpo_A HSC20, chaperone protei 98.6 9.1E-09 3.1E-13 77.7 1.1 33 1-33 27-67 (171)
27 3bvo_A CO-chaperone protein HS 98.6 9.6E-09 3.3E-13 79.9 1.3 34 1-34 69-110 (207)
28 2guz_A Mitochondrial import in 98.6 8.1E-09 2.8E-13 67.6 0.6 32 1-33 39-70 (71)
29 3apo_A DNAJ homolog subfamily 98.5 7.8E-09 2.7E-13 90.0 -0.4 33 1-33 45-80 (780)
30 3hho_A CO-chaperone protein HS 98.5 1.2E-08 4.1E-13 77.1 0.2 33 1-33 30-70 (174)
31 2qwo_B Putative tyrosine-prote 94.9 0.0015 5.3E-08 45.0 -2.4 12 1-12 57-68 (92)
32 3ag7_A Putative uncharacterize 90.6 0.017 5.8E-07 40.3 -2.3 11 1-11 64-74 (106)
33 2guz_B Mitochondrial import in 85.1 0.28 9.6E-06 31.6 1.0 26 3-29 33-58 (65)
34 1n4c_A Auxilin; four helix bun 82.9 0.19 6.5E-06 38.4 -0.6 12 1-12 141-152 (182)
35 3pr6_A Trapp-associated protei 32.2 43 0.0015 25.0 3.6 17 15-31 112-129 (162)
36 3fy6_A Integron cassette prote 25.5 60 0.002 23.2 3.2 28 95-122 74-101 (126)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.27 E-value=1.2e-12 Score=85.58 Aligned_cols=42 Identities=33% Similarity=0.657 Sum_probs=36.5
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||++++..++|++|++||+||+|+.+| ..||++|++
T Consensus 32 l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~g~~ 73 (73)
T 2och_A 32 MALKFHPDKNPDGAEQFKQISQAYEVLSDEKKR------------------QIYDQGGEE 73 (73)
T ss_dssp HHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHH------------------HHHHHTC--
T ss_pred HHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHH------------------HHHHhcCCC
Confidence 478999999998889999999999999999876 579999863
No 2
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.16 E-value=8.3e-12 Score=85.23 Aligned_cols=42 Identities=29% Similarity=0.543 Sum_probs=37.5
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||++++..++|++|++||+||+|+.+| ..||++|..
T Consensus 32 l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~~~~ 73 (92)
T 2o37_A 32 AALKYHPDKPTGDTEKFKEISEAFEILNDPQKR------------------EIYDQYGLE 73 (92)
T ss_dssp HHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHH------------------HHHHHHCHH
T ss_pred HHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHH------------------HHHHHHCHH
Confidence 478999999998889999999999999999876 479998865
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.13 E-value=2.1e-11 Score=80.18 Aligned_cols=42 Identities=43% Similarity=0.699 Sum_probs=36.8
Q ss_pred CcchhCCCCCC--CHHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNP--GGRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp--~~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+++ ++.++|++|++||++|+||.+| ..||++|+.
T Consensus 27 l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R------------------~~Yd~~~~~ 70 (77)
T 1hdj_A 27 QALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR------------------EIFDRYGEE 70 (77)
T ss_dssp HHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHH------------------HHHHHTCGG
T ss_pred HHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHH------------------HHHHHHccc
Confidence 47899999986 5789999999999999999876 579999875
No 4
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=2.7e-11 Score=80.36 Aligned_cols=42 Identities=31% Similarity=0.606 Sum_probs=36.0
Q ss_pred CcchhCCCCCCC----HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG----GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~----~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+++. +.++|++|++||++|+|+.+| ..||++|+.
T Consensus 33 l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~g~~ 78 (82)
T 2ej7_A 33 LALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR------------------DIYDRYGSG 78 (82)
T ss_dssp HHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHH------------------HHHHHTCCC
T ss_pred HHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHcCcc
Confidence 478999999985 357999999999999999876 479999864
No 5
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=4e-11 Score=84.55 Aligned_cols=52 Identities=19% Similarity=0.385 Sum_probs=41.9
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhhcccccchhhH
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEELSGYKYAGYR 70 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~l~~~kyagy~ 70 (125)
|+++||||+|++ +.++|++|++||+||+|+.+| ..||++|..-....|..+.
T Consensus 44 l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R------------------~~YD~~~~~~~~~~~~~w~ 98 (112)
T 2ctq_A 44 RALECHPDKHPENPKAVETFQKLQKAKEILTNEESR------------------ARYDHWRRSQMSMPFQQWE 98 (112)
T ss_dssp HHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHH------------------HHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHhhhhccCCCHHHHH
Confidence 478999999874 688999999999999999877 4799999875554444443
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=3.6e-11 Score=79.24 Aligned_cols=42 Identities=24% Similarity=0.468 Sum_probs=36.2
Q ss_pred CcchhCCCCCCC--HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG--GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~--~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+++. +.++|++|++||+||+|+.+| ..||++|..
T Consensus 31 l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~~~~ 74 (78)
T 2ctp_A 31 LALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKR------------------KQYDQFGSG 74 (78)
T ss_dssp HHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHH------------------HHHHHTCSC
T ss_pred HHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHH------------------HHHHHcCcc
Confidence 478999999964 678999999999999999876 479998864
No 7
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=2.9e-11 Score=79.75 Aligned_cols=42 Identities=26% Similarity=0.554 Sum_probs=36.1
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||++++ +.++|++|++||++|+|+.+| ..||++|..
T Consensus 31 l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~g~~ 75 (79)
T 2dn9_A 31 LAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKR------------------KQYDAYGSG 75 (79)
T ss_dssp HHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHH------------------HHHHHSCCC
T ss_pred HHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHhccCc
Confidence 478999999864 578999999999999999876 479998864
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.07 E-value=3.8e-11 Score=81.21 Aligned_cols=42 Identities=33% Similarity=0.676 Sum_probs=36.5
Q ss_pred CcchhCCCCCC--CHHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNP--GGRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp--~~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+|+ .+.++|++|++||++|+|+.+| ..||++|+.
T Consensus 41 l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~g~~ 84 (88)
T 2cug_A 41 LAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKR------------------TNYDHYGSG 84 (88)
T ss_dssp HHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHH------------------HHHHHHTTC
T ss_pred HHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHH------------------HHHHHcCCC
Confidence 47899999986 4789999999999999999876 479999864
No 9
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=8e-11 Score=79.60 Aligned_cols=42 Identities=26% Similarity=0.438 Sum_probs=36.3
Q ss_pred CcchhCCCCCCC--HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG--GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~--~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+++. +.++|++|++||++|+|+.+| ..||++|+.
T Consensus 31 l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R------------------~~Yd~~~~~ 74 (88)
T 2ctr_A 31 LAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRR------------------KEYDTLGHS 74 (88)
T ss_dssp HHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHH------------------HHHHHTCHH
T ss_pred HHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHhCcc
Confidence 478999999975 578999999999999999876 479998864
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.03 E-value=8.3e-11 Score=82.69 Aligned_cols=42 Identities=36% Similarity=0.585 Sum_probs=36.2
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||++++ +.++|++|++||+||+|+.+| ..||++|..
T Consensus 41 la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R------------------~~YD~~g~~ 85 (109)
T 2ctw_A 41 LALKYHPDKNPDNPEAADKFKEINNAHAILTDATKR------------------NIYDKYGSL 85 (109)
T ss_dssp HHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHH------------------HHHHHTCHH
T ss_pred HHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHH------------------HHHHHhccc
Confidence 478999999985 468999999999999999876 479998864
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=8.4e-11 Score=79.79 Aligned_cols=42 Identities=31% Similarity=0.554 Sum_probs=36.0
Q ss_pred CcchhCCCCCCC----HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG----GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~----~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||+++. +.++|++|++||+||+|+.+| ..||++|..
T Consensus 33 l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R------------------~~Yd~~~~~ 78 (92)
T 2dmx_A 33 LALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR------------------SLYDRAGCD 78 (92)
T ss_dssp HHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHH------------------HHHHHHCSC
T ss_pred HHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHhCcc
Confidence 478999999975 467999999999999999876 479998864
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=81.22 Aligned_cols=42 Identities=36% Similarity=0.652 Sum_probs=36.3
Q ss_pred CcchhCCCCCCC----HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG----GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~----~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
|+++||||++++ +.++|++|++||++|+|+.+| ..||++|..
T Consensus 26 la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R------------------~~YD~~g~~ 71 (99)
T 2lgw_A 26 KALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR------------------EIYDRYGRE 71 (99)
T ss_dssp HHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHH------------------HHHHHHHHC
T ss_pred HHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHhCcc
Confidence 478999999985 468999999999999999876 479999864
No 13
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=98.97 E-value=1.5e-10 Score=80.85 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=36.5
Q ss_pred CcchhCCCCCCC------HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhhc
Q psy3088 1 IASQYHPDKNPG------GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEEL 61 (125)
Q Consensus 1 LA~kyHPDkNp~------~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~l 61 (125)
|+++||||++++ +.++|++|++||+||+||.+| ..||++++.-
T Consensus 40 l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R------------------~~YD~~~~~~ 88 (109)
T 2qsa_A 40 LARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAK------------------TNYDYYLDHP 88 (109)
T ss_dssp HHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHH------------------HHHHHHHHCT
T ss_pred HHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHhccCc
Confidence 478999999975 468999999999999999877 4799888653
No 14
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=98.96 E-value=6.6e-11 Score=82.07 Aligned_cols=43 Identities=28% Similarity=0.578 Sum_probs=36.8
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhhc
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEEL 61 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~l 61 (125)
|+++||||+|+. +.++|++|++||+||+|+.+| ..||++|+.-
T Consensus 27 l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R------------------~~YD~~~~~~ 72 (103)
T 1bq0_A 27 LAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR------------------AAYDQYGHAA 72 (103)
T ss_dssp HHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHH------------------HHTTTSTTTS
T ss_pred HHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHH------------------HHHHHHhhhh
Confidence 478999999863 678999999999999999876 4799998763
No 15
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=2.1e-10 Score=79.11 Aligned_cols=33 Identities=39% Similarity=0.583 Sum_probs=29.5
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||++++ +.++|++|++||+||+|+.+|
T Consensus 41 l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R 76 (99)
T 2yua_A 41 QCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76 (99)
T ss_dssp HHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
Confidence 478999999974 578999999999999999876
No 16
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=98.96 E-value=2.2e-10 Score=77.58 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=29.2
Q ss_pred CcchhCCCCCCC---------HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG---------GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~---------~~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||+|+. +.++|++|++||+||+|+.+|
T Consensus 40 l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R 81 (94)
T 1wjz_A 40 LILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETK 81 (94)
T ss_dssp TTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHH
T ss_pred HHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHH
Confidence 689999999863 457999999999999999877
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.96 E-value=1.5e-10 Score=86.11 Aligned_cols=42 Identities=33% Similarity=0.647 Sum_probs=35.9
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhhh
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSEE 60 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~~ 60 (125)
||++||||+|++ +.++|++|++||++|+|+.+| ..||+||+.
T Consensus 26 l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r------------------~~yd~~~~~ 70 (210)
T 3apq_A 26 LALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR------------------KKYDKYGEK 70 (210)
T ss_dssp HHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHH------------------HHHHHHTTT
T ss_pred HHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHH------------------HHHHHhccc
Confidence 478999999963 678999999999999999876 468888765
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=3e-10 Score=77.43 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=30.9
Q ss_pred CcchhCCCCCC--CHHHHHHHHHHHHHHhcccccccC
Q psy3088 1 IASQYHPDKNP--GGRDIFVRANKAYDFLCSRTCWQN 35 (125)
Q Consensus 1 LA~kyHPDkNp--~~~ekFk~I~~AYevLsd~~~r~~ 35 (125)
|+++||||+|+ ++.++|++|++||++|+|+.+|..
T Consensus 51 la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 51 LAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 57899999995 578999999999999999998753
No 19
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.92 E-value=1e-10 Score=83.77 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.3
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhccccccc
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCWQ 34 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r~ 34 (125)
||++||||||++ .++|++|++||+||+|+.+|.
T Consensus 34 la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~ 66 (114)
T 1gh6_A 34 KCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYA 66 (114)
T ss_dssp TTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSC
T ss_pred HHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHH
Confidence 689999999987 679999999999999999884
No 20
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=98.89 E-value=1.2e-10 Score=89.39 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=32.7
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhcccccccCCCCCChhHHHHHhhhHHHhhhhhh
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCWQNNDPNPNNIVLVLRTQSILFHRYSE 59 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r~~~gpd~~~~~l~L~~q~~~Y~ryg~ 59 (125)
+|+++|||+|++ .++|++|++||+||+|+.+| ..||+||+
T Consensus 37 La~~~HPDk~~~-~e~F~~I~~AYevLsdp~kR------------------~~YD~~G~ 76 (174)
T 2pf4_E 37 KCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKY------------------AHQPDFGG 76 (174)
T ss_dssp HGGGCSCC---C-CTTTTHHHHHHHHHHHHHHH------------------HTSCGGGG
T ss_pred HHHHHCcCCCCC-HHHHHHHHHHHHHhCCHHHH------------------HHHhccCC
Confidence 589999999986 57999999999999999877 47999995
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.82 E-value=1e-09 Score=75.30 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=29.1
Q ss_pred CcchhCCCCCCC----HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG----GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~----~~ekFk~I~~AYevLsd~~~r 33 (125)
||++||||+|++ +.++|++|++||+||+|...|
T Consensus 40 la~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 40 LYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 578999999986 468999999999999997655
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.78 E-value=6.8e-10 Score=91.46 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=0.0
Q ss_pred CcchhCCCCCCC--HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG--GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~--~~ekFk~I~~AYevLsd~~~r 33 (125)
||++||||+|++ ++++|++|++||+||+|+.+|
T Consensus 52 la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R 86 (329)
T 3lz8_A 52 LARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRR 86 (329)
T ss_dssp -----------------------------------
T ss_pred HHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhh
Confidence 689999999874 578999999999999999987
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=98.74 E-value=1.7e-09 Score=72.43 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=28.9
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhccccccc
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCWQ 34 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r~ 34 (125)
||++||||+++. .++|++|++||++|+|+.+|.
T Consensus 37 la~~~HPDk~~~-~~~f~~i~~AYe~L~~~~~r~ 69 (79)
T 1faf_A 37 QSLLLHPDKGGS-HALMQELNSLWGTFKTEVYNL 69 (79)
T ss_dssp HHHHSSGGGSCC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCcCCCCC-HHHHHHHHHHHHHHhhHHHHH
Confidence 578999999865 689999999999999988763
No 24
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.72 E-value=3.1e-09 Score=78.09 Aligned_cols=33 Identities=24% Similarity=0.463 Sum_probs=28.8
Q ss_pred CcchhCCCCCCCH---------HHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPGG---------RDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~~---------~ekFk~I~~AYevLsd~~~r 33 (125)
|+++|||||++.. .++|++|++||+||+||.+|
T Consensus 34 l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R 75 (155)
T 2l6l_A 34 LILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETK 75 (155)
T ss_dssp HHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHH
T ss_pred HHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4789999998642 47999999999999999887
No 25
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.68 E-value=1.2e-09 Score=83.48 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=30.6
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||+|+++.++|++|++||+||+||.+|
T Consensus 42 la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R 74 (181)
T 3uo3_A 42 LQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRR 74 (181)
T ss_dssp HHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHH
T ss_pred HHHHhCcCCCccHHHHHHHHHHHHHHHcChHHH
Confidence 478999999998888999999999999999987
No 26
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.59 E-value=9.1e-09 Score=77.69 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=28.6
Q ss_pred CcchhCCCCCCCH--------HHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPGG--------RDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~~--------~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||++++. .++|+.|++||+||+||.+|
T Consensus 27 L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R 67 (171)
T 1fpo_A 27 LQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMR 67 (171)
T ss_dssp HHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 4789999998752 36899999999999999987
No 27
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.59 E-value=9.6e-09 Score=79.93 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=28.9
Q ss_pred CcchhCCCCCCC--------HHHHHHHHHHHHHHhccccccc
Q psy3088 1 IASQYHPDKNPG--------GRDIFVRANKAYDFLCSRTCWQ 34 (125)
Q Consensus 1 LA~kyHPDkNp~--------~~ekFk~I~~AYevLsd~~~r~ 34 (125)
|+++||||++++ +.++|++|++||+||+||.+|.
T Consensus 69 L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 69 LQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp HHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred HHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 478999999874 2368999999999999999873
No 28
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.58 E-value=8.1e-09 Score=67.59 Aligned_cols=32 Identities=38% Similarity=0.447 Sum_probs=27.2
Q ss_pred CcchhCCCCCCCHHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPGGRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~~~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||++ +..++|++|++||++|+++..|
T Consensus 39 l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 39 IMLANHPDKG-GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhc
Confidence 4789999996 4567999999999999997654
No 29
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.54 E-value=7.8e-09 Score=90.02 Aligned_cols=33 Identities=36% Similarity=0.652 Sum_probs=12.4
Q ss_pred CcchhCCCCCCC---HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG---GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~---~~ekFk~I~~AYevLsd~~~r 33 (125)
||++||||+|++ +.++|++|++||++|+||.+|
T Consensus 45 l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r 80 (780)
T 3apo_A 45 LALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 80 (780)
T ss_dssp -----------------------CTHHHHHHSHHHH
T ss_pred HHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHH
Confidence 689999999864 568999999999999999887
No 30
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.52 E-value=1.2e-08 Score=77.11 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=28.7
Q ss_pred CcchhCCCCCCC--------HHHHHHHHHHHHHHhcccccc
Q psy3088 1 IASQYHPDKNPG--------GRDIFVRANKAYDFLCSRTCW 33 (125)
Q Consensus 1 LA~kyHPDkNp~--------~~ekFk~I~~AYevLsd~~~r 33 (125)
|+++||||++++ +.++|+.|++||+||+||.+|
T Consensus 30 l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R 70 (174)
T 3hho_A 30 LQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRR 70 (174)
T ss_dssp HHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHH
Confidence 478999999874 247999999999999999987
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=94.90 E-value=0.0015 Score=45.01 Aligned_cols=12 Identities=33% Similarity=0.407 Sum_probs=10.3
Q ss_pred CcchhCCCCCCC
Q psy3088 1 IASQYHPDKNPG 12 (125)
Q Consensus 1 LA~kyHPDkNp~ 12 (125)
+|++|||||||+
T Consensus 57 lal~~HPDK~~~ 68 (92)
T 2qwo_B 57 AVLVVHPCKATG 68 (92)
T ss_dssp HHHHTCHHHHTT
T ss_pred HHHHHCcCCCCC
Confidence 478999999985
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=90.63 E-value=0.017 Score=40.25 Aligned_cols=11 Identities=36% Similarity=0.374 Sum_probs=9.5
Q ss_pred CcchhCCCCCC
Q psy3088 1 IASQYHPDKNP 11 (125)
Q Consensus 1 LA~kyHPDkNp 11 (125)
||++||||||+
T Consensus 64 lal~~HPDK~~ 74 (106)
T 3ag7_A 64 ALLILHPDKLQ 74 (106)
T ss_dssp HHHHHCHHHHH
T ss_pred HHHHHCcCcCC
Confidence 47899999986
No 33
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=85.12 E-value=0.28 Score=31.56 Aligned_cols=26 Identities=15% Similarity=0.070 Sum_probs=19.4
Q ss_pred chhCCCCCCCHHHHHHHHHHHHHHhcc
Q psy3088 3 SQYHPDKNPGGRDIFVRANKAYDFLCS 29 (125)
Q Consensus 3 ~kyHPDkNp~~~ekFk~I~~AYevLsd 29 (125)
...|||+. +..-.+..|++|+++|-.
T Consensus 33 ~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 33 EVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 46799984 445567789999999864
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=82.87 E-value=0.19 Score=38.39 Aligned_cols=12 Identities=42% Similarity=0.625 Sum_probs=10.0
Q ss_pred CcchhCCCCCCC
Q psy3088 1 IASQYHPDKNPG 12 (125)
Q Consensus 1 LA~kyHPDkNp~ 12 (125)
||++|||||+++
T Consensus 141 lal~~HPDK~~~ 152 (182)
T 1n4c_A 141 AVLVVHPDKATG 152 (182)
T ss_dssp HHHHTCGGGGSS
T ss_pred HHHHHCcCcCCC
Confidence 478999999864
No 35
>3pr6_A Trapp-associated protein TCA17; longin fold, vesicle tethering regulation, trapp complex, TR network, transport protein; 1.80A {Saccharomyces cerevisiae}
Probab=32.15 E-value=43 Score=24.97 Aligned_cols=17 Identities=29% Similarity=0.555 Sum_probs=13.9
Q ss_pred HHHHHHHHHH-HHhcccc
Q psy3088 15 DIFVRANKAY-DFLCSRT 31 (125)
Q Consensus 15 ekFk~I~~AY-evLsd~~ 31 (125)
..|++|.++| .++++|=
T Consensus 112 ~~F~~vh~~Yvk~l~NPF 129 (162)
T 3pr6_A 112 QIFETVRKIYIRVKCNPL 129 (162)
T ss_dssp HHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 4799999999 7888863
No 36
>3fy6_A Integron cassette protein; novel, oyster POND, woodshole,USA, unknown function, structural genomics, PSI-2, protein structure initiative; 2.10A {Vibrio cholerae}
Probab=25.49 E-value=60 Score=23.21 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=26.0
Q ss_pred chhHHHHHHHHHHHhhhcccCHHHHHhc
Q psy3088 95 DSLLQAAVELAYHTVQCSALNAQELNNE 122 (125)
Q Consensus 95 ~~ll~~a~eL~~~T~~~s~lNaeel~r~ 122 (125)
..+-+.|.|-+|+--+..+||-+|+.||
T Consensus 74 P~i~~~~~~~AW~EWR~~~L~~Dei~~E 101 (126)
T 3fy6_A 74 PEITQNLFQHAWLEWRKGALDNDEVTRE 101 (126)
T ss_dssp BTTHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 6788999999999999999999999886
Done!