Query psy3090
Match_columns 326
No_of_seqs 210 out of 2272
Neff 10.1
Searched_HMMs 29240
Date Sat Aug 17 01:24:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3090.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3090hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 3.4E-37 1.2E-41 288.3 16.6 201 73-273 29-237 (510)
2 3uon_A Human M2 muscarinic ace 100.0 3.3E-34 1.1E-38 264.8 14.8 197 74-274 21-219 (467)
3 3odu_A C-X-C chemokine recepto 100.0 7.2E-34 2.4E-38 265.1 14.6 199 72-275 44-243 (502)
4 2rh1_A Beta-2-adrenergic recep 100.0 1.2E-33 4.2E-38 263.7 14.7 199 73-274 37-239 (500)
5 1u19_A Rhodopsin; G protein-co 100.0 9.2E-34 3.2E-38 252.0 13.1 231 73-322 35-270 (349)
6 3vw7_A Proteinase-activated re 100.0 1.5E-33 5.3E-38 261.6 12.6 200 72-273 16-220 (484)
7 4dkl_A MU-type opioid receptor 100.0 3.8E-33 1.3E-37 257.5 13.9 197 73-273 14-213 (464)
8 2ks9_A Substance-P receptor; w 100.0 1E-32 3.6E-37 246.9 16.0 229 76-322 32-265 (364)
9 3pbl_A D(3) dopamine receptor, 100.0 1.9E-33 6.5E-38 260.8 10.4 193 74-275 36-231 (481)
10 4amj_A Beta-1 adrenergic recep 100.0 2.5E-33 8.5E-38 245.5 8.3 238 73-322 8-249 (315)
11 2z73_A Rhodopsin; visual pigme 100.0 1.2E-32 4.1E-37 253.5 11.9 243 74-322 32-278 (448)
12 3v2y_A Sphingosine 1-phosphate 100.0 2.7E-32 9.3E-37 255.8 13.8 188 76-272 63-250 (520)
13 4ea3_A Fusion protein of nocic 100.0 8.6E-32 2.9E-36 246.9 16.4 230 72-322 121-354 (434)
14 3rze_A Histamine H1 receptor, 100.0 2.4E-32 8.2E-37 251.4 10.6 195 76-274 8-204 (452)
15 3sn6_R Lysozyme, beta-2 adrene 100.0 2.3E-32 7.8E-37 256.0 9.3 248 73-322 179-439 (514)
16 3eml_A Human adenosine A2A rec 100.0 1E-31 3.5E-36 249.4 12.7 198 74-275 19-226 (488)
17 2lnl_A C-X-C chemokine recepto 100.0 4.5E-31 1.5E-35 229.8 14.4 218 74-321 9-230 (296)
18 4eiy_A Adenosine receptor A2A/ 100.0 3.1E-32 1.1E-36 250.3 4.8 199 73-275 28-236 (447)
19 1hll_A Alpha-2A adrenergic rec 98.5 3.2E-08 1.1E-12 54.6 1.9 30 164-193 2-31 (32)
20 2lot_A Apelin receptor; membra 96.4 0.00012 4.1E-09 46.4 -2.9 31 78-108 30-60 (64)
21 2ki9_A Cannabinoid receptor 2; 86.6 0.035 1.2E-06 29.9 -2.4 20 303-322 3-23 (33)
22 2rdd_B UPF0092 membrane protei 41.1 15 0.00052 20.0 1.8 23 251-273 6-29 (37)
23 3odu_A C-X-C chemokine recepto 28.3 1.4E+02 0.0049 26.2 7.2 53 72-126 41-93 (502)
24 3arc_M Photosystem II reaction 22.4 1E+02 0.0035 16.6 3.3 22 243-264 8-29 (36)
25 3arc_I Photosystem II reaction 22.0 89 0.003 16.9 2.6 17 78-94 10-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-37 Score=288.35 Aligned_cols=201 Identities=24% Similarity=0.466 Sum_probs=174.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCC---ChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMR---TPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNY 149 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~---~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~ 149 (326)
...+++..++|++++++|++||+++++++.++|++| ++.|+|++|||++|++.++..+|+.+.........|.+|+.
T Consensus 29 ~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~ 108 (510)
T 4grv_A 29 IYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDA 108 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHH
Confidence 455778888999999999999999999999887655 68899999999999999999999998887765578999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccC-----C
Q psy3090 150 GCKMSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQID-----P 224 (326)
Q Consensus 150 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~-----~ 224 (326)
.|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.++..... .
T Consensus 109 ~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~ 188 (510)
T 4grv_A 109 GCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHP 188 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654422 2
Q ss_pred cceeecccCCcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccc
Q psy3090 225 FRETCDFKLPRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKS 273 (326)
Q Consensus 225 ~~~~C~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~ 273 (326)
....|...++......|..+..++.+++|+++|+++|.+|+++++++.+
T Consensus 189 ~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~ 237 (510)
T 4grv_A 189 GGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVN 237 (510)
T ss_dssp GGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred CccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 3456777776666666777778888999999999999999999987644
No 2
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=3.3e-34 Score=264.83 Aligned_cols=197 Identities=21% Similarity=0.319 Sum_probs=173.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccch
Q psy3090 74 EYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKM 153 (326)
Q Consensus 74 ~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~ 153 (326)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+..... ..|.++...|++
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~ 98 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVI--GYWPLGPVVCDL 98 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHS--SSCCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCCcchHhH
Confidence 345678889999999999999999999999999999999999999999999999999988887776 789999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccc--cCCcceeecc
Q psy3090 154 SVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQ--IDPFRETCDF 231 (326)
Q Consensus 154 ~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~--~~~~~~~C~~ 231 (326)
..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++++.... .......|..
T Consensus 99 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 178 (467)
T 3uon_A 99 WLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYI 178 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999988765432 2334556776
Q ss_pred cCCcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccc
Q psy3090 232 KLPRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSM 274 (326)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~ 274 (326)
.+... ..|.....++.+++|+++++++|.+|++.+++++++
T Consensus 179 ~~~~~--~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 219 (467)
T 3uon_A 179 QFFSN--AAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINI 219 (467)
T ss_dssp GGGGS--HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 65433 246677778889999999999999999999988753
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=7.2e-34 Score=265.05 Aligned_cols=199 Identities=26% Similarity=0.405 Sum_probs=174.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccccc
Q psy3090 72 SLEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGC 151 (326)
Q Consensus 72 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C 151 (326)
....+.+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+ +.+|..+.... ..|.++...|
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~---~~~~~~~~~C 119 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV---ANWYFGNFLC 119 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH---TCCCSHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh---cCCcCCchhh
Confidence 3456788889999999999999999999999999999999999999999999996 58888887776 5799999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeecc
Q psy3090 152 KMSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDF 231 (326)
Q Consensus 152 ~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~ 231 (326)
++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++...... ......|..
T Consensus 120 ~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~-~~~~~~C~~ 198 (502)
T 3odu_A 120 KAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSE-ADDRYICDR 198 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEE-CSSSEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeec-cCCceEEee
Confidence 9999999999999999999999999999999999999999999999999999999999999988766554 445677886
Q ss_pred cCCcc-hhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccccc
Q psy3090 232 KLPRS-YYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMK 275 (326)
Q Consensus 232 ~~~~~-~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~ 275 (326)
.++.. ....|.+...++.+++|+++++++|.+|++.++|++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 199 FYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp CCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 66544 333456666788899999999999999999999987663
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.2e-33 Score=263.70 Aligned_cols=199 Identities=24% Similarity=0.361 Sum_probs=167.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
.....+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.++..+|..+..... ..|.+|...|+
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~--~~w~~~~~~C~ 114 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILM--KMWTFGNFWCE 114 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TSCCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcCCcchhh
Confidence 3456678889999999999999999999999999999999999999999999999999998887776 78999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHH-hhhcccccCCcceeecc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWL-FLTETRQIDPFRETCDF 231 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~-~~~~~~~~~~~~~~C~~ 231 (326)
+..++..++..+|++++++||+|||++|++|++|++..+++++..+++++|++++++++++. +.+.... ......|..
T Consensus 115 ~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~-~~~~~~c~~ 193 (500)
T 2rh1_A 115 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRAT-HQEAINCYA 193 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeeccc-ccCcceecc
Confidence 99999999999999999999999999999999999989999999999999999999986544 3333221 222334543
Q ss_pred cCC---cchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccc
Q psy3090 232 KLP---RSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSM 274 (326)
Q Consensus 232 ~~~---~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~ 274 (326)
... ......|.....++.+++|+++++++|.+|++.++|+.++
T Consensus 194 ~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 194 EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 1123346667777889999999999999999999987665
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=9.2e-34 Score=252.03 Aligned_cols=231 Identities=19% Similarity=0.369 Sum_probs=190.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
+....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.++...|..+..... +.|.+++..|+
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~--~~~~~~~~~C~ 112 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH--GYFVFGPTGCN 112 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TSCTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhc--CeeeCChhHHH
Confidence 3456677888999999999999999999999999999999999999999999999888988877665 67999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK 232 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~ 232 (326)
+..++..++..+|++++++||+|||++|++|++|++ .+++++...++++|+++++.++|+++.+.....+.....|..+
T Consensus 113 ~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 191 (349)
T 1u19_A 113 LEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID 191 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeeccc
Confidence 999999999999999999999999999999999887 6889999999999999999999998877655545556678766
Q ss_pred CCcc----hhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeee
Q psy3090 233 LPRS----YYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPC 308 (326)
Q Consensus 233 ~~~~----~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (326)
+... ....|.....++.+++|++++.++|.+|+++++|+++++++. +++++.++++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~ 255 (349)
T 1u19_A 192 YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES----------------ATTQKAEKEVTRMV 255 (349)
T ss_dssp CSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSS----------------SHHHHHHHHHHHHH
T ss_pred ccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc----------------hhhHHHHHHHHHHH
Confidence 5321 334466666778889999999999999999988776533221 11223445566666
Q ss_pred E-EehhHHHHhhhcc
Q psy3090 309 L-VHFPFVLHYLVHL 322 (326)
Q Consensus 309 ~-v~i~f~i~~~~~~ 322 (326)
+ +.+.|++||+|..
T Consensus 256 ~~i~~~f~i~~~P~~ 270 (349)
T 1u19_A 256 IIMVIAFLICWLPYA 270 (349)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 5 6678999999863
No 6
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=261.63 Aligned_cols=200 Identities=27% Similarity=0.430 Sum_probs=165.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccccc
Q psy3090 72 SLEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGC 151 (326)
Q Consensus 72 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C 151 (326)
+...+.+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.++. +|..+..... ...|.++...|
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~-~~~~~~~~~~C 93 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFS-GSDWQFGSELC 93 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHT-TSCCCSCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh-cCCcccchhHH
Confidence 346677889999999999999999999999999999999999999999999999775 5544444332 25899999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccc-cCCcceeec
Q psy3090 152 KMSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQ-IDPFRETCD 230 (326)
Q Consensus 152 ~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~-~~~~~~~C~ 230 (326)
++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.+.... .......|.
T Consensus 94 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~ 173 (484)
T 3vw7_A 94 RFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceee
Confidence 9999999999999999999999999999999999999899999999999999999999999998876543 233456787
Q ss_pred ccCCcc----hhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccc
Q psy3090 231 FKLPRS----YYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKS 273 (326)
Q Consensus 231 ~~~~~~----~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~ 273 (326)
..+... ....|.....++.+++|+++++++|.+|++.++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~ 220 (484)
T 3vw7_A 174 DVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSAN 220 (484)
T ss_dssp SSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred ccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhH
Confidence 765443 2223556667888999999999999999999998875
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=3.8e-33 Score=257.45 Aligned_cols=197 Identities=26% Similarity=0.484 Sum_probs=172.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
...+.+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++. +|..+..... +.|.++...|+
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~--~~~~~~~~~C~ 90 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLM--GTWPFGNILCK 90 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--SSCCSCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh--CCcccccchhh
Confidence 34567888999999999999999999999999999999999999999999999886 8888777776 78999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK 232 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~ 232 (326)
+..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++...... ......|...
T Consensus 91 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~-~~~~~~c~~~ 169 (464)
T 4dkl_A 91 IVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKY-RQGSIDCTLT 169 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEE-ETTEEECCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecc-cCCCceEEee
Confidence 999999999999999999999999999999999999999999999999999999999999887554433 4455678766
Q ss_pred CCcch---hhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccc
Q psy3090 233 LPRSY---YLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKS 273 (326)
Q Consensus 233 ~~~~~---~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~ 273 (326)
+.... ...|.....++.+++|+++++++|.+|++.++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~ 213 (464)
T 4dkl_A 170 FSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRN 213 (464)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 54432 334566777788999999999999999999988776
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1e-32 Score=246.92 Aligned_cols=229 Identities=21% Similarity=0.416 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccchhh
Q psy3090 76 RIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKMSV 155 (326)
Q Consensus 76 ~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~~~ 155 (326)
..+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.++...|..+..... +.|.+++..|++..
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~~ 109 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVH--NEWYYGLFYCKFHN 109 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--TSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccchHHHHHhHH
Confidence 3455788999999999999999999999999999999999999999999998888887776665 78999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeecccCCc
Q psy3090 156 FLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFKLPR 235 (326)
Q Consensus 156 ~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 235 (326)
++..++..+|++++++||+|||++|++|++|+ .++++.+..++++|+++++.++|....... ........|..+++.
T Consensus 110 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~-~~~~~~~~C~~~~~~ 186 (364)
T 2ks9_A 110 FFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTT-ETMPSRVVCMIEWPE 186 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCC-CBCTTCSSBCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhh-eecCCCCEEeecCCC
Confidence 99999999999999999999999999999987 488889999999999999999987654333 334455668766543
Q ss_pred c----hhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeeeE-E
Q psy3090 236 S----YYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPCL-V 310 (326)
Q Consensus 236 ~----~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 310 (326)
. ....|.....++.+++|++++.++|.+|.+.+++++++.+... +.+++.+++++++++++ +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~-------------~~~~~~~~~~k~~~~~~~v 253 (364)
T 2ks9_A 187 HPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSD-------------RYHEQVSAKRKVVKMMIVV 253 (364)
T ss_dssp CCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSS-------------CSSHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcch-------------hhhhhHHhhhhHHHHHHHH
Confidence 2 2234666667788999999999999999999876554322211 11123345566667766 6
Q ss_pred ehhHHHHhhhcc
Q psy3090 311 HFPFVLHYLVHL 322 (326)
Q Consensus 311 ~i~f~i~~~~~~ 322 (326)
.+.|++||+|..
T Consensus 254 ~~~f~~~~~P~~ 265 (364)
T 2ks9_A 254 VCTFAICWLPFH 265 (364)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 679999999853
No 9
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=260.83 Aligned_cols=193 Identities=24% Similarity=0.351 Sum_probs=164.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccch
Q psy3090 74 EYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKM 153 (326)
Q Consensus 74 ~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~ 153 (326)
..+.+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+..... ...|.++...|++
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~-~~~~~~~~~~C~~ 114 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-GGVWNFSRICCDV 114 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-TSCCCSCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccccCcchhhh
Confidence 445677788899999999999999999999999999999999999999999999899988766553 2578999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhcccccc---ccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeec
Q psy3090 154 SVFLQYLGINASSLNLIAFTVERYIAICKPMLA---HRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCD 230 (326)
Q Consensus 154 ~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~---~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~ 230 (326)
..++..++..+|++++++||+|||++|++|++| ....+++++..+++++|++++++++|+++.+.... ....|.
T Consensus 115 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~---~~~~C~ 191 (481)
T 3pbl_A 115 FVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG---DPTVCS 191 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS---STTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccC---CCCccc
Confidence 999999999999999999999999999999999 56678899999999999999999999888765532 344576
Q ss_pred ccCCcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccccc
Q psy3090 231 FKLPRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMK 275 (326)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~ 275 (326)
..+ ..|.....++.+++|+++++++|++|++.++++++++
T Consensus 192 ~~~-----~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~ 231 (481)
T 3pbl_A 192 ISN-----PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKN 231 (481)
T ss_dssp CCC-----HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred ccC-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 542 2356666788899999999999999999999887653
No 10
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.98 E-value=2.5e-33 Score=245.50 Aligned_cols=238 Identities=21% Similarity=0.303 Sum_probs=187.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
...+....+++.+++++|++||+++++++.+++++|++.++++.|||++|++.++...|..+..... +.|.+++..|+
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~ 85 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVR--GTWLWGSFLCE 85 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--SSCCSCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhc--CCeeccccHHH
Confidence 3566788899999999999999999999999999999999999999999999998889988877776 78999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK 232 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~ 232 (326)
+..++..++..+|.+++++||+|||++|++|++|++..+++++...++++|+++++.+.|+.+.............|..+
T Consensus 86 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 165 (315)
T 4amj_A 86 LWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQD 165 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccc
Confidence 99999999999999999999999999999999999989999999999999999999998888765444333333455443
Q ss_pred CC---cchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeeeE
Q psy3090 233 LP---RSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPCL 309 (326)
Q Consensus 233 ~~---~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (326)
.. ......|.....++.+++|++++.++|.+|++.++++.++.++.... ++.++..++++++.+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~k~~~~~~ 235 (315)
T 4amj_A 166 PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKR----------KTSRVMLMREHKALKTLG 235 (315)
T ss_dssp TTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----------------------CHHHHHHHHHHHHHHH
T ss_pred cccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc----------ccchhhhhhhhhHHHHHH
Confidence 22 12334566677778889999999999999999999887654433211 111122234556666665
Q ss_pred -EehhHHHHhhhcc
Q psy3090 310 -VHFPFVLHYLVHL 322 (326)
Q Consensus 310 -v~i~f~i~~~~~~ 322 (326)
+.+.|.+||+|..
T Consensus 236 ~~~~~f~i~~~P~~ 249 (315)
T 4amj_A 236 IIMGVFTLCWLPFF 249 (315)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 6678999999863
No 11
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.98 E-value=1.2e-32 Score=253.48 Aligned_cols=243 Identities=19% Similarity=0.299 Sum_probs=193.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHh-hhhHHHHHhhhccccccccccccc
Q psy3090 74 EYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIA-AVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 74 ~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~-~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
.......+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++. .+|..+..... ..|.++...|+
T Consensus 32 ~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~--~~~~~~~~~C~ 109 (448)
T 2z73_A 32 AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL--KKWIFGFAACK 109 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHT--TSCCSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhc--CCccCCHHHHH
Confidence 4556777889999999999999999999999999999999999999999999987 48887776665 68999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK 232 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~ 232 (326)
+..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++++.++....+.....|..+
T Consensus 110 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~ 189 (448)
T 2z73_A 110 VYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFD 189 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecc
Confidence 99999999999999999999999999999999999999999999999999999999999998887766655556678765
Q ss_pred CCc--chhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeeeE-
Q psy3090 233 LPR--SYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPCL- 309 (326)
Q Consensus 233 ~~~--~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (326)
+.. .....+.....++.+++|+++++++|.+|++.++|++++.++........ ..++.++..+++++++++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~k~~~~l~~ 265 (448)
T 2z73_A 190 YISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAK----ELRKAQAGANAEMRLAKISIV 265 (448)
T ss_dssp CSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCT----THHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH----HHHhhhccccHHHHHHHHHHH
Confidence 432 23334556666777999999999999999999988765543221100000 00111122234556666655
Q ss_pred EehhHHHHhhhcc
Q psy3090 310 VHFPFVLHYLVHL 322 (326)
Q Consensus 310 v~i~f~i~~~~~~ 322 (326)
++++|++||+|..
T Consensus 266 iv~~F~i~~~P~~ 278 (448)
T 2z73_A 266 IVSQFLLSWSPYA 278 (448)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHH
Confidence 6678999999863
No 12
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.98 E-value=2.7e-32 Score=255.78 Aligned_cols=188 Identities=19% Similarity=0.242 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccchhh
Q psy3090 76 RIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKMSV 155 (326)
Q Consensus 76 ~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~~~ 155 (326)
..+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.++...|..+.... ..|.++...|++..
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~~---~~~~~~~~~c~~~~ 139 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGA---TTYKLTPAQWFLRE 139 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSGG---GGTTSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHccc---cceeeCccccchHH
Confidence 378889999999999999999999999999999999999999999999999988888776633 78899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeecccCCc
Q psy3090 156 FLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFKLPR 235 (326)
Q Consensus 156 ~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 235 (326)
++..++..+|++++++||+|||++|+ |++|+...+++++..+++++|++++++++|+++++... .....|...++.
T Consensus 140 ~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---~~~~~C~~~~~~ 215 (520)
T 3v2y_A 140 GSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---SALSSCSTVLPL 215 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---TCGGGBCSSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---cCCCcccccCCc
Confidence 99999999999999999999999999 99999999999999999999999999999998877655 344578776643
Q ss_pred chhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcc
Q psy3090 236 SYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSK 272 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~ 272 (326)
.. .++....++.+++|+++++++|.+|++.+++++
T Consensus 216 ~~--~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 216 YH--KHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp BB--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 22 233344556699999999999999999999875
No 13
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.97 E-value=8.6e-32 Score=246.89 Aligned_cols=230 Identities=22% Similarity=0.414 Sum_probs=183.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccccc
Q psy3090 72 SLEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGC 151 (326)
Q Consensus 72 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C 151 (326)
+...+.+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++. +...|..+..... +.|.++...|
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~--~~~~~~~~~C 197 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILL--GFWPFGNALC 197 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHH--TSCTTHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHh--cCCcCcccHH
Confidence 556788888999999999999999999999999999999999999999999998 4578888877776 6799999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeecc
Q psy3090 152 KMSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDF 231 (326)
Q Consensus 152 ~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~ 231 (326)
++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|..+...... ......|..
T Consensus 198 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~-~~~~~~c~~ 276 (434)
T 4ea3_A 198 KTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQV-EDEEIECLV 276 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECC-CSSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEe-ecCceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998877544333 444567776
Q ss_pred cCCcc---hhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeee
Q psy3090 232 KLPRS---YYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPC 308 (326)
Q Consensus 232 ~~~~~---~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (326)
..... ....|.....++.+++|+++++++|.+|++.+++++++.+.+ ++.+.++++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~~ 339 (434)
T 4ea3_A 277 EIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSR-----------------EKDRNLRRITRLV 339 (434)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSSCH-----------------HHHHHHHHHHHHH
T ss_pred ecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccch-----------------hhHHHHhHHHHHH
Confidence 65433 223466677788899999999999999999998765432211 1223345556665
Q ss_pred E-EehhHHHHhhhcc
Q psy3090 309 L-VHFPFVLHYLVHL 322 (326)
Q Consensus 309 ~-v~i~f~i~~~~~~ 322 (326)
+ +++.|++||+|..
T Consensus 340 ~~vv~~F~i~w~P~~ 354 (434)
T 4ea3_A 340 LVVVAVFVGCWTPVQ 354 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 5 6678999999853
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=251.35 Aligned_cols=195 Identities=22% Similarity=0.327 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccchhh
Q psy3090 76 RIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKMSV 155 (326)
Q Consensus 76 ~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~~~ 155 (326)
..+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+..... ..|.++...|++..
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~~ 85 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLM--SKWSLGRPLCLFWL 85 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHS--SSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccCCchhHhHHH
Confidence 4466778899999999999999999999999999999999999999999999999999888776 78999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccc--cCCcceeecccC
Q psy3090 156 FLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQ--IDPFRETCDFKL 233 (326)
Q Consensus 156 ~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~--~~~~~~~C~~~~ 233 (326)
++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|.+....... .......|..++
T Consensus 86 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 165 (452)
T 3rze_A 86 SMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDF 165 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCC
Confidence 999999999999999999999999999999999999999999999999999999888543322221 112445676555
Q ss_pred CcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccc
Q psy3090 234 PRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSM 274 (326)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~ 274 (326)
.... .|.....++.+++|+++++++|.+|++.+++++++
T Consensus 166 ~~~~--~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 204 (452)
T 3rze_A 166 YDVT--WFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNI 204 (452)
T ss_dssp TTCH--HHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCH
T ss_pred cccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 4332 46667778889999999999999999999887655
No 15
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=2.3e-32 Score=256.00 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=187.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
........+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+..... ..|.++...|+
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~ 256 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGNFWCE 256 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--TSCCSCSHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHc--CCeeCCcchhh
Confidence 4456678889999999999999999999999999999999999999999999999899988888776 78999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK 232 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~ 232 (326)
+..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++.+.............|...
T Consensus 257 ~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~ 336 (514)
T 3sn6_R 257 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAE 336 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeec
Confidence 99999999999999999999999999999999999989999999999999999999987766543322222223334332
Q ss_pred C---CcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccce---------eeeeeecccccccc
Q psy3090 233 L---PRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVT---------MVSVTHRHTKNNSS 300 (326)
Q Consensus 233 ~---~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 300 (326)
. .......|.....++.+++|+++++++|.+|++.++++.++.+.......... .....++..+..++
T Consensus 337 ~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (514)
T 3sn6_R 337 ETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLK 416 (514)
T ss_dssp SSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHH
Confidence 2 12223356677788889999999999999999999887654432211100000 00001111222334
Q ss_pred cceeeeeeE-EehhHHHHhhhcc
Q psy3090 301 RAQVSVPCL-VHFPFVLHYLVHL 322 (326)
Q Consensus 301 ~~~~~~~~~-v~i~f~i~~~~~~ 322 (326)
++++.++++ +++.|++||+|..
T Consensus 417 ~~r~~~~l~~iv~~F~lcwlP~~ 439 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLCWLPFF 439 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655 6678999999864
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=1e-31 Score=249.43 Aligned_cols=198 Identities=20% Similarity=0.265 Sum_probs=166.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccch
Q psy3090 74 EYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKM 153 (326)
Q Consensus 74 ~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~ 153 (326)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+... ..|..+...|++
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~----~~~~~~~~~C~~ 94 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----TGFCAACHGCLF 94 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT----TCCEECHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccccccchHHHH
Confidence 3355788889999999999999999999999999999999999999999999999999877654 468888999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccC----Ccceee
Q psy3090 154 SVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQID----PFRETC 229 (326)
Q Consensus 154 ~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~----~~~~~C 229 (326)
..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.+...... .....|
T Consensus 95 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c 174 (488)
T 3eml_A 95 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGC 174 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998877654422 122345
Q ss_pred cccCCc------chhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccccc
Q psy3090 230 DFKLPR------SYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMK 275 (326)
Q Consensus 230 ~~~~~~------~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~ 275 (326)
...... .....+.....++.+++|+++++++|.+|++.+++++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~ 226 (488)
T 3eml_A 175 GEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIF 226 (488)
T ss_dssp CTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred ccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 443211 1122344555677899999999999999999999887654
No 17
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=4.5e-31 Score=229.84 Aligned_cols=218 Identities=20% Similarity=0.349 Sum_probs=172.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccch
Q psy3090 74 EYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCKM 153 (326)
Q Consensus 74 ~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~~ 153 (326)
..+.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ ..|....... .+|..|+..|+.
T Consensus 9 ~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~---~~~~~~~~~c~~ 84 (296)
T 2lnl_A 9 LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV---NGWIFGTFLCKV 84 (296)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH---SSSCCSSHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc---CCCccchhHHHH
Confidence 345677888999999999999999999999999999999999999999999887 5666665555 679999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCcceeeccc-
Q psy3090 154 SVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPFRETCDFK- 232 (326)
Q Consensus 154 ~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~~~~C~~~- 232 (326)
..++...+..+|.+++++||+|||.+|++|++|+... +++...+++++|+.+++.++|+..++.....+.....|...
T Consensus 85 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~ 163 (296)
T 2lnl_A 85 VSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVL 163 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCC
T ss_pred HhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeec
Confidence 9999999999999999999999999999999998754 45677788889999999999998887766544433333222
Q ss_pred --CCcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccccccCceecccceeeeeeecccccccccceeeeeeE-
Q psy3090 233 --LPRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMKHKGRLIHSNVTMVSVTHRHTKNNSSRAQVSVPCL- 309 (326)
Q Consensus 233 --~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (326)
........+......+.+++|+.++..+|.++.++++++++ ++++|+.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~-------------------------~~~~k~~~~~~~ 218 (296)
T 2lnl_A 164 GNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-------------------------GQKHRAMRVIFA 218 (296)
T ss_dssp SCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC-------------------------HHHHTHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------------hhhhhHHHHHHH
Confidence 12223334566667788999999999999988765443321 12234455554
Q ss_pred EehhHHHHhhhc
Q psy3090 310 VHFPFVLHYLVH 321 (326)
Q Consensus 310 v~i~f~i~~~~~ 321 (326)
+.+.|.+||+|.
T Consensus 219 v~~~f~icw~P~ 230 (296)
T 2lnl_A 219 VVLIFLLCWLPY 230 (296)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhheeeeehHH
Confidence 677999999985
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=3.1e-32 Score=250.28 Aligned_cols=199 Identities=20% Similarity=0.255 Sum_probs=164.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc
Q psy3090 73 LEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVLIAAVPNELVSYYQEKYTWLWGNYGCK 152 (326)
Q Consensus 73 ~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~~C~ 152 (326)
.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+... ..|..+...|+
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~----~~~~~~~~~C~ 103 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----TGFCAACHGCL 103 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH----TTCEEEHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccCccHHH
Confidence 35566888899999999999999999999999999999999999999999999998999877644 56777889999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccccccchhhHHHHHHHHHHHHHHhhHHhhhcccccCCc----cee
Q psy3090 153 MSVFLQYLGINASSLNLIAFTVERYIAICKPMLAHRICTLNRARKILIYVWIFAVIYSSPWLFLTETRQIDPF----RET 228 (326)
Q Consensus 153 ~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~i~~~wi~s~~~~~~~~~~~~~~~~~~~----~~~ 228 (326)
+..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.+........ ...
T Consensus 104 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
T 4eiy_A 104 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQG 183 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999887655432211 122
Q ss_pred ecccC------CcchhhhHhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccccc
Q psy3090 229 CDFKL------PRSYYLVYFFTDIIVFYVIPLALSCLLYILIAHALLSSKSMK 275 (326)
Q Consensus 229 C~~~~------~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~~~l~~~~~~~ 275 (326)
|.... .......+.....++.+++|+++++++|.+|++.++|+.++.
T Consensus 184 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 236 (447)
T 4eiy_A 184 CGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADL 236 (447)
T ss_dssp CCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33221 011112233444566789999999999999999999875543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.52 E-value=3.2e-08 Score=54.56 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhhccccccccccccc
Q psy3090 164 ASSLNLIAFTVERYIAICKPMLAHRICTLN 193 (326)
Q Consensus 164 ~s~~~l~~isidRy~~i~~P~~~~~~~~~~ 193 (326)
+|++++++||+|||++|++|++|....+++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999998876655
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.41 E-value=0.00012 Score=46.40 Aligned_cols=31 Identities=19% Similarity=0.421 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhheeecCCCC
Q psy3090 78 IGTIFQSIIFIVGLLGNIMVVSVVYKIRSMR 108 (326)
Q Consensus 78 ~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~ 108 (326)
+..++|++++++|++||+++++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 6678899999999999999999998877543
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=86.63 E-value=0.035 Score=29.94 Aligned_cols=20 Identities=10% Similarity=0.100 Sum_probs=14.4
Q ss_pred eeeeeeE-EehhHHHHhhhcc
Q psy3090 303 QVSVPCL-VHFPFVLHYLVHL 322 (326)
Q Consensus 303 ~~~~~~~-v~i~f~i~~~~~~ 322 (326)
++.+++. +...|.+||+|..
T Consensus 3 k~~k~l~~vv~~F~icW~P~~ 23 (33)
T 2ki9_A 3 RLAKTLGLVLAVLLICWFPVL 23 (33)
T ss_dssp SSSSHHHHHHHHHTTTSSHHH
T ss_pred hhhhhHHHHHHHHHHHHhHHH
Confidence 4456655 6679999999853
No 22
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=41.14 E-value=15 Score=19.96 Aligned_cols=23 Identities=13% Similarity=0.322 Sum_probs=13.0
Q ss_pred hHHHHHH-HHHHHHHHHHHHhccc
Q psy3090 251 VIPLALS-CLLYILIAHALLSSKS 273 (326)
Q Consensus 251 ~lp~~ii-~~~y~~I~~~l~~~~~ 273 (326)
++|++++ ++.|..+.|--+|+.+
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4455544 5667777666555443
No 23
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=28.26 E-value=1.4e+02 Score=26.22 Aligned_cols=53 Identities=13% Similarity=0.025 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhHhhhhheeecCCCCChhHHHHHHHHHHHHHHH
Q psy3090 72 SLEYRIIGTIFQSIIFIVGLLGNIMVVSVVYKIRSMRTPTNCYLVSLSIADLMVL 126 (326)
Q Consensus 72 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~v~~~~~~l~~~~~~~l~~Lai~Dll~~ 126 (326)
.........++.++..+++++|=+..+.++.--.+.++... ..++-+.++..+
T Consensus 41 ~~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~--~~~~~l~~La~~ 93 (502)
T 3odu_A 41 EENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRS--MTDKYRLHLSVA 93 (502)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCC--HHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC--HHHHHHHHHHHH
Confidence 45556777788888888888888888888877555444443 344444444333
No 24
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=22.42 E-value=1e+02 Score=16.58 Aligned_cols=22 Identities=18% Similarity=0.489 Sum_probs=16.4
Q ss_pred HHHHHHhhhHHHHHHHHHHHHH
Q psy3090 243 FTDIIVFYVIPLALSCLLYILI 264 (326)
Q Consensus 243 ~~~~~~~~~lp~~ii~~~y~~I 264 (326)
++...++.++|.+.+++.|++-
T Consensus 8 fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 8 LIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhee
Confidence 4445666789999999988753
No 25
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=22.02 E-value=89 Score=16.90 Aligned_cols=17 Identities=29% Similarity=0.641 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3090 78 IGTIFQSIIFIVGLLGN 94 (326)
Q Consensus 78 ~~~~~~~~i~i~gi~gN 94 (326)
...++++.++++|.+.|
T Consensus 10 ~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 10 IVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHccccCC
Confidence 44556677778888776
Done!